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Alignment for radish unigene UN19691

               1      -     51
UN19691        --> ATAGGAATGCTCCTTTAGAGATTTCTTCTGCGTAACGATTATGAACATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD988775       <-- ...........................CTGCGTAACGATTATGAACATTA
FD988819       <-- ...........................CTGCGTAACGATTATGAACATTA
FD556922       <-- ..................................................
FD558975       <-- ..................................................
EV570270       <-- ..................................................
FD558577       <-- ..................................................
EV570355       <-- ..................................................
EY916309       <-- ..................................................
FD549152       <-- ..................................................
FD956837       <-- ..................................................
FD952638       --> ATAGGAATGCTCCTTTAGAGATTTCTTCTGCGTAACGATTATGAACATTA
EY912008       --> .............................GCGTAACGATTATGAACATTA
FD583963       --> .............................GCGTAACGATTATGAACATTA
EV574665       --> ..................................................
FD529304       --> ..................................................
FD553136       --> ..................................................
EV574606       --> ..................................................

               51     -    101
UN19691        --> ACGGTTCCAAGAGACCAACAAAGTATTTATTGGCAGTTACAAATGAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD988775       <-- ACGGTTCCAAGAGACCAACAAAGTATTTATTGGCAGTTACAAATGAACAA
FD988819       <-- ACGGTTCCAAGAGACCAACAAAGTATTTATTGGCAGTTACAAATGAACAA
FD556922       <-- ..........ggGACCAACAAAGTATTTATTGGCAGTTACAAATGAACAA
FD558975       <-- ............GACCAACAAAGTATTTATTGGCAGTTACAAATGAACAA
EV570270       <-- ..................................................
FD558577       <-- ..................................................
EV570355       <-- ..................................................
EY916309       <-- ..................................................
FD549152       <-- ..................................................
FD956837       <-- ..................................................
FD952638       --> ACGGTTCCAAGAGACCAACAAAGTATTTATTGGCAGTTACAAATGAACAA
EY912008       --> ACGGTTCCAAGAGACCAACAAAGTATTTATTGGCAGTTACAA-TGAACAA
FD583963       --> ACGGTTCCAAGAGACCAACAAAGTATTTATTGGCAGTTACAAATGAACAA
EV574665       --> ......gCAAGAGACCAACAAAGTATTTATTGGCAGTTACAAATGAACAA
FD529304       --> ................AACAAAGTATTTATTGGCAGTTACAAATGAACAA
FD553136       --> ..................................................
EV574606       --> ..................................................

               101    -    151
UN19691        --> TAAATTAAAAGTTGGAGCCTTTAGGCTTCTGAGACATCAACGTTGTTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD988775       <-- TAAATTAAAAGTTGGAGCCTTTAGGCTTCTGGGACATCAACGTTGTTTAA
FD988819       <-- TAAATTAAAAGTTGGAGCCTTTAGGCTTCTGGGACATCAACGTTGTTTAA
FD556922       <-- TAAATTAAAAGTTGGAGCCTTTAGGCTTCTGAGACATCAACGTTGTTTAA
FD558975       <-- TAAATTAAAAGTTGGAGCCTTTAGGCTTCTGAGACATCAACGTTGTTTAA
EV570270       <-- ..................................................
FD558577       <-- ..................................................
EV570355       <-- ..................................................
EY916309       <-- ..................................................
FD549152       <-- ..................................................
FD956837       <-- ..................................................
FD952638       --> TAAATTAAAAGTTGGAGCCTTTAGGCTTCTGAGACATCAACGTTGTTTAA
EY912008       --> TAAATTAAAATTTGGAGCCTTTAGGCTTCTGAGACATCAACGTTGTTTAA
FD583963       --> TAAATTAAAAGTTGGAGCCTTTAGGCTTCTGAGACATCAACGTTGTTTAA
EV574665       --> TAAATTAAAAGTTGGAGCCTTTAGGCTTCTGAGACACCAACGTTGTTTAA
FD529304       --> TAAATTAAAAGTTGGAGCCTTTAGGCTTCTGAGACATCAACGTTGTTTAA
FD553136       --> ..................................................
EV574606       --> ..................................................

               151    -    201
UN19691        --> AGCTTCTTCTGAGGAAGATGATGATGATAATGCATCTTGGAGACCTTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD988775       <-- AGCTTCTTCTGAGGAAGATGATGATGATAATGCATCTTGGAGACCTTCAG
FD988819       <-- AGCTTCTTCTGAGGAAGATGATGATGATAATGCATCTTGGAGACCTTCAG
FD556922       <-- AGCTTCTTCTGAGGAAGATGATGATGATAATGCATCTTGGAGACCTTCAG
FD558975       <-- AGCTTCTTCTGAGGAAGATGATGATGATAATGCATCTTGGAGACCTTCAG
EV570270       <-- ................................................AG
FD558577       <-- ................................................AG
EV570355       <-- ..................................................
EY916309       <-- ..................................................
FD549152       <-- ..................................................
FD956837       <-- ..................................................
FD952638       --> AGCTTCTTCTGAGGAAGATGATGATGATAATGCATCTTGGAGACCTTCAG
EY912008       --> AGCTTCTTCTGAGGAAGATGATGATGATAATGCATCTTGGAGACCTTCAG
FD583963       --> AGCTTCTTCTGAGGAAGATGATGATGATAATGCATCTTGGAGACCTTCAG
EV574665       --> AGCTTCTTCTGAGGAAGATGATGATGATAATGCATCTTGGAGACCTTCAG
FD529304       --> AGCTTCTTCTGAGGAAGATGATGAT---AATGCATCTTGGAGACCTTCAa
FD553136       --> .............................................TTCAA
EV574606       --> ..................................................

               201    -    251
UN19691        --> AAGTATCATCAGACGGCTGAGATTCATGCTTAGCAGCAGCCTGCAAAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD988775       <-- AAGTATCACCAGACGGCTGAGATTCATGCCCAGCAGCAGCCTGCAAAA..
FD988819       <-- AAGTATCACCAGACGGCTGAGATTCATGCCCAGCAGCAGCCTGCAAAA..
FD556922       <-- AAGTATCATCAGACGGCTGAGATTCATGCTTAGCAGCAGCCTGCAAAACC
FD558975       <-- AAGTATCATCAGACGGCTGAGATTCATGCTTAGCAGCAGCCTGCAAAACC
EV570270       <-- AAATATCATCAGACGGCTGAGATTCATGCTTAGCAGCAGCGTGCAAAACC
FD558577       <-- AAGTATCATCAGACGGCTGAGATTCATGCTTAGCAGCAGC-TGCAAAACC
EV570355       <-- ..................................................
EY916309       <-- ..................................................
FD549152       <-- ..................................................
FD956837       <-- ..................................................
FD952638       --> AAGTATCATCAGACGGCTGAGATTCATGCTTAGCAGCAGCCTGCAAAACC
EY912008       --> AAGTATCATCAGACGGCTGAGATTCATGCTTAGCAGCAGCCTGCAAAACC
FD583963       --> AAGTATCATCAGACGGCTGAAATTCATGCTTAGCAGCAGCCTGCAAAACC
EV574665       --> AAATATCATCAGACGGCTGAAATTCATGCTTAGCAGCAGCCTGCAAAACC
FD529304       --> aa................................................
FD553136       --> AAGTATCATCAGACGGCTGAAATTCATGCTTAGCAGCAGCCTGCAAAACC
EV574606       --> ..............................TAGCAGCAGCCTGCAAAACC

               251    -    301
UN19691        --> CGG-CTTCGGACATCTGAGGAAGAAGGTGAAGTTGGGAGGCCAACACCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD988775       <-- ..................................................
FD988819       <-- ..................................................
FD556922       <-- CGG-CTTCGGACATCTGAGGAAGAAGGTGAAGTTGGGAGGCCAACACCAT
FD558975       <-- CGG-CTTCGGACATCTGAGGAAGAAGGTGAAGTTGGGAGGCCAACACCAT
EV570270       <-- CGGGCTTCGGACATCTGAGGAAGAAGGTGAAGTTGGGAGGCCAACACCAT
FD558577       <-- CGG-CTTCGGACATCTGAGGAAGAAGGTGAAGTTGG-AGGCCAACACCAT
EV570355       <-- ....CTTCGGACATCTGAGGAAGAAGGTGAAGTTGGGAGGCCAACACCAT
EY916309       <-- .........GACATCTGAGGAAGAAGGTGAAGTTGGGAGGCCAACACCAT
FD549152       <-- ..................................................
FD956837       <-- ..................................................
FD952638       --> CGG-CTTCGGACATCTGAGGAAGAAGGTGAAGTTGGGAGGCCAACACCAT
EY912008       --> CGG-CTTCGGACATCTGAGGAAGAAGGTGAAGTTGGGAGGCCAACACCAT
FD583963       --> CGG-CTTCGGACATCTGAGGAAGAAGGTGAAGTTGGGAGGCCAACACCAT
EV574665       --> CGG-CTTCGGACATCTGAGGAAGAAGGTGAAGTTGGGAGGCCAACACCAT
FD529304       --> ..................................................
FD553136       --> CGG-CTTCGGACATCTGAGGAAGAAGGTGAAGTTGGGAGGCCAACACCAT
EV574606       --> CGG-CTTCGGACATCTGAGGAAGAAGGGGAAGTTGGGAGGCCAACACCAT

               301    -    351
UN19691        --> TTGTCTCAAGCTTTCCTGCAGCCCATGAGAAAGCCTGAGCTCCAAGTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD988775       <-- ..................................................
FD988819       <-- ..................................................
FD556922       <-- TTGTCTCAAGCCTTCCTGCAGCCCATGAGAAAGCCTGAGCTCCAAGTTTC
FD558975       <-- TTGTCTCAAGCTTTCCTGCAGCCCATGAGAAAGCCTGAGCTCCAAGTTTC
EV570270       <-- TTGTCTCAAGCTTTCCTGCAGCCCATGAGAAAGCCTGAGCTCCAAGTTTC
FD558577       <-- TTGTCTCAAGCTTTCCTGCAGCCCATGAGAAAGCCTGAGCTCCAAGTTTC
EV570355       <-- TTGTCTCAAGCTTTCCTGCAGCCCATGAGAAAGCCTGAGCTCCAAGTTTC
EY916309       <-- TTGTCTCAAGCTTTCCTGCAGCCCATGAGAAAGCCTGAGCTCCAAGTTTC
FD549152       <-- .....................................AGCTCCAAGTTTC
FD956837       <-- ..................................................
FD952638       --> TTGTCTCAAGCTTTCCTGCAGCCCATGAGAAAGCCTGAGCTCCAAGTTTC
EY912008       --> TTGTCTCAAGCTTTCCTGCAGCCCATGAGAAAGCCTGAGCTCCAAGTTTC
FD583963       --> TTGTCTCAAGCTTTCCTGCAGCCCATGAGAAAGCCTGAGCTCCAAGTTTC
EV574665       --> TTGTCTCAAGCTTTCCTGCAGCCCATGAGAAAGCCTGAGCTCCAAGTTTC
FD529304       --> ..................................................
FD553136       --> TTGTCTCAAGCCTTCCTGCAGCCCATGAGAAAGCCTGAGCTCCAAGTTTC
EV574606       --> TTGTCTCAAGCTTTCCTGCAGCCCATGAGAAAGCCTGAGCTCCAAGTTTC

               351    -    401
UN19691        --> ACTGGTGCAAACAATTGCCTGACGTCTTGCTTGAAGTCTTCCGAGTCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD988775       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD988819       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD556922       <-- ACTGGTGCAAACAATTGCCTGACGTCTTGCTTGAAGTCTTCC........  Raphanus raphanistrum subsp. landra
FD558975       <-- ACTGGTGCAAACAATTGCCTGACGTCTTGCTTGAAGTCTTCCGAGTCATC  Raphanus raphanistrum subsp. landra
EV570270       <-- ACTGGTGCAAACAATTGCCTGACGTCTTGCTTGAAGTCTTCCGAGTCATC  Raphanus raphanistrum subsp. landra
FD558577       <-- AATGGTGCAAACAATTGCCTGACGTCTTGCTTGAAGTCTTCCGAGTCATC  Raphanus raphanistrum subsp. landra
EV570355       <-- ACTGGTGCAAACAATTGCCTGACGTCTTGCTTGAAGTCTTCCGAGTCATC  Raphanus raphanistrum subsp. landra
EY916309       <-- ACCGGTGCAAACAATTGCCTGACGTCTTGCTTGAAGTCTTCCGAGTCATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD549152       <-- ACCGGTGCAAACAATTGCCTGACGTCTTGCTTGAAGTCTTCCGAGTCATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD956837       <-- .............................................TCATC  Raphanus sativus cv Rat-Tail Radish #3870
FD952638       --> GCCGGTGCAAACAATTGCCTGACGTCTTGCTTGAAATCTTCCGAGTCATC  Raphanus sativus cv Rat-Tail Radish #3870
EY912008       --> ACCGGTGCAAACAATTGCCTGACGTCTTGCTTGAAGTCTTCCGAGTCATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD583963       --> ACCGGTGCAAACAATTGCCTGACGTCTTGCTTGAAGTCTTCCGAGTCATC  Raphanus sativus cv Rat-Tail Radish #3870
EV574665       --> ACTGGTGCAAACAATTGCCTGACGTCTTGCTTGAAGTCTTCCGAGTCATC  Raphanus raphanistrum subsp. landra
FD529304       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD553136       --> ACTGGTGCAAACAATTGCCTGACGTCTTGCTTGAAGTCTTCC........  Raphanus raphanistrum subsp. landra
EV574606       --> ACTGGTGCAAACAATTGCCTGACGTCTTGCTTGAAGTCTTCCGAGTCATC  Raphanus raphanistrum subsp. landra

               401    -    451
UN19691        --> ATAGGAAGCAAGACGTTGGTATATAGTCAAACCAAGGCCAATGACAGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD988775       <-- ..................................................
FD988819       <-- ..................................................
FD556922       <-- ..................................................
FD558975       <-- ATAGGAAGCAAGACGTTGGTATATAGTCAAACCAAGGCCAATGACAGCTA
EV570270       <-- ATAGGAAGCAAGACGTTGGTATATAGTCAAACCAAGGCCAATGACAGCTA
FD558577       <-- ATAGGAAGCAAGACGTTGGTATATAGTCAAACCAAGGCCAATGACAGCTA
EV570355       <-- ATAGGAAGCAAGACGTTGGTATATAGTCAAACCAAGGCCAATGACAGCTA
EY916309       <-- ATAGGAAGCAAGACGTTGGTATATAGTCAAACCAAGGCCAATGACAGCTA
FD549152       <-- ATAGGAAGCAAGACGTTGGTATATAGTCAAACCAAGGCCAATGACAGCTA
FD956837       <-- ATAGGAAGCAAGACGTTGGTATATAGTCAAACCAAGGCCAATGACAGCTA
FD952638       --> ATAGGAAGCAAGACGTTGGTATATAGTCAAACCAAGGCCAATGACAGCTA
EY912008       --> ATAGGAAGCAAGACGTTGGTATATAGTCAAACCAAGGCCAATGACAGCTA
FD583963       --> ATAGGAAGCAAGACGTTGGTATATAGTCAAACCAAGGCCAATGACAGCTA
EV574665       --> ATAGGAAGCAAGACGTTGGTATATAGTCAAACCAAGGCCAATGACAGCTA
FD529304       --> ..................................................
FD553136       --> ..................................................
EV574606       --> ATAGGAAGCAAGACGTTGGTATATAGTCAAACCAAGGCCAATGACAGCTA

               451    -    501
UN19691        --> TGAGTTGCAGTGTTTTCTCCCACTCAAACAAAGCGTATGATCCTGCCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD988775       <-- ..................................................
FD988819       <-- ..................................................
FD556922       <-- ..................................................
FD558975       <-- TGAGTTGCAGTGTTTTCTCCCACTCAAACAAAGCGTATGATCCTGCCAAA
EV570270       <-- TGAGTTGCAGTGTTTTCTCCCACTCAAACAAAGCGTATGATCCTGCCAAA
FD558577       <-- TGAGTTGCAGTGTTTTCTCCCACTCAAACAAAGCGTATGATCCTGCCAAA
EV570355       <-- TGAGTTGCAGTGTTTTCTCCCACTCAAACAAAGCGTATGATCCTGCCAAA
EY916309       <-- TGAGTTGCAGTGTTTTCTCCCACTCAAACAAAGCGTATGATCCTGCCAAA
FD549152       <-- TGAGTTGCAGTGTTTTCTCCCACTCAAACAAAGCGTATGATCCTGCCAAA
FD956837       <-- TGAGTTGCAGTGTTTTCTCCCACTCAAACAAAGCGTATGATCCTGCCAAA
FD952638       --> TGAGTTGCAGTGTTTTCTCCCACTCAAACAAAGCGTATGATCCTGCCAAA
EY912008       --> TGAGTTGCAGTGTTTTCTCCCACTCAAACAAAGCGTATGATCCTGCCAAA
FD583963       --> TGAGTTGCAGTGTTTTCTCCCACTCAAACAAAGCGTATGATCCTGCCAAA
EV574665       --> TGAGTTGCAGTGTTTTCTCCCACTCAAACAAAGCGTATGATCCTGCCAAA
FD529304       --> ..................................................
FD553136       --> ..................................................
EV574606       --> TGAGTTGCAGTGTTTTCTCCCACTCAAACAAAGCGTATGATCCTGCCAAA

               501    -    551
UN19691        --> ACCCCCACACCAACTCCAGCTACTTGCAATGGAGAAGGGTTTATTTCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD988775       <-- ..................................................
FD988819       <-- ..................................................
FD556922       <-- ..................................................
FD558975       <-- ACCCCCACACCAACTCCAGCTACTTGCAATGGAGAAGGGTTTATTTCCTC
EV570270       <-- ACCCCCACACCAACTCCAGCTACTTGCAATGGAGAAGGGTTTATTTCCTC
FD558577       <-- ACCCCCACACCAACTCCAGCTACTTGCAATGGAGAAGGGTTTATTTCCTC
EV570355       <-- ACCCCCACACCAACTCCAGCTACTTGCAATGGAGAAGGGTTTATTTCCTC
EY916309       <-- ACCCCCACACCAACTCCAGCTACTTGCAATGGAGAAGGGTTTATTTCCTC
FD549152       <-- ACCCCCACACCAACTCCAGCTACTTGCAATGGAGAAGGGTTTATTTCCTC
FD956837       <-- ACCCCCACACCAACTCCAGCTACTTGCAATGGAGAAGGGTTTATTTCCTC
FD952638       --> ACCCCCACACCAACTCCAGCTACTTGCAATGGAGAAGGGTTTATTTCCTC
EY912008       --> ACCCCCACACCAACTCCAGCTACTTGCAATGGAGAAGGGTTTATTTCCTC
FD583963       --> ACCCCCACACCAACTCCAGCTACTTGCAATGGAGAAGGGTTTATTTCCTC
EV574665       --> ACCCCCACACCAACTCCAGCTACTTGCAATGGAGAAGGGTTTATTTCCTC
FD529304       --> ..................................................
FD553136       --> ..................................................
EV574606       --> ACCCCCACACCAACTCCAGCTACTTGCAATGGAGAAGGGTTTATTTCCTC

               551    -    601
UN19691        --> AAGGATCGCCTCAGCTTCCTCGTTGAGGATGGAAAGTGTGGTCTCAGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD988775       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD988819       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD556922       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD558975       <-- AAGGATCGCCTCAGCTTCCTCGTTGAGGATGGAAAGTGTGGTCTCAGGTT  Raphanus raphanistrum subsp. landra
EV570270       <-- AAGGATCGCCTCAGCTTCCTCGTTGAGGATGGAAAGTGTGGTCTCAGGTT  Raphanus raphanistrum subsp. landra
FD558577       <-- AAGGATCGCCTCAGCTTCCTCGTTGAGGATGGAAAGTGTGGTCTCAGGTT  Raphanus raphanistrum subsp. landra
EV570355       <-- AAGGATCGCCTCAGCTTCCTCGTTGAGGATGGAAAGTGTGGTCTCAGGTT  Raphanus raphanistrum subsp. landra
EY916309       <-- AAGGATCGCCTCAGCTTCCTCGTTGAGGATGGTAAGTGTTGTCTCAGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD549152       <-- AAGGATCGCCTCAGCTTCCTCGTTGAGGATGGTAAGTGTTGTCTCAGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD956837       <-- AAGGATCGCCTCAGCTTCCTCGTTGAGGATGGAAAGTGTGGTCTCAGGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD952638       --> AAGGATCGCCTCAGCTTCCTCGTTGAGGATGGAAAGTGTGGTCTCAGGTT  Raphanus sativus cv Rat-Tail Radish #3870
EY912008       --> AAGGATCGCCTCAGCTTCCTCGTTGAGGATGGTAAGTGTTGTCTCAGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD583963       --> AAGGATCGCCTCAGCTTCCTCGTTGAGGATGGTAAGTGTTGTCTCAGGTT  Raphanus sativus cv Rat-Tail Radish #3870
EV574665       --> AAGGATCGCCTCAGCTTCCTCGTTGAGGATGGAAAGTGTGGTCTCAGGTT  Raphanus raphanistrum subsp. landra
FD529304       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD553136       --> ..................................................  Raphanus raphanistrum subsp. landra
EV574606       --> AAGGATCGCCTC......................................  Raphanus raphanistrum subsp. landra

               601    -    651
UN19691        --> TTGGTTCTTTCACACGAAGACCTTCTTTAACCCATGATCTAAACCCACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD988775       <-- ..................................................
FD988819       <-- ..................................................
FD556922       <-- ..................................................
FD558975       <-- TTGGTTCTTTCACACGAAGACCTTCTTTAACCCATGATCTAAACCCACCT
EV570270       <-- TTGGTTCTTTCACACGAAGACCTTCTTTAACCCATGATCTAAACCCACCT
FD558577       <-- TTGGTTCTTTCACACGAAGACCTTCTTTAACCCATGATCTAAACCCACCT
EV570355       <-- TTGGTTCTTTCACACGAAGACCTTCTTTAACCCATGATCTAAACCCACCT
EY916309       <-- TTGGTTCTTTCACACGAAGACCTTCTTTAACCCATGATCTAAACCCACCT
FD549152       <-- TTGGTTCTTTCACACGAAGACCTTCTTTAACCCATGATCTAAACCCACCT
FD956837       <-- TTGGTTCTTTCACACGAAGACCTTCTTTAACCCATGATCTAAACCCACCT
FD952638       --> TTGGTTCTTTCACACGAAGACCTTCTTTAACCCATGATCTAAACCCACCT
EY912008       --> TTGGTTCTTTCACACGAAGACCTTCTTTAACCCATGATCTAAACCCACCT
FD583963       --> TTGGTTCTTTCACACGAAGACCTTCTTTAACCCATGATCTAAACCCACCT
EV574665       --> TTGGTTCTTTCACACGAAGACCTTCTTTAACCCATGATCTAAACCCACCT
FD529304       --> ..................................................
FD553136       --> ..................................................
EV574606       --> ..................................................

               651    -    701
UN19691        --> TGCACCAAGTATGGCCTCTTAATCCCAAGTTTTCTCAAGGCTCTTGCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD988775       <-- ..................................................
FD988819       <-- ..................................................
FD556922       <-- ..................................................
FD558975       <-- TGCACCAAGTATGGCCTCTTAATCCCAAGTTTTCTCAAGGCTCTTGCAAT
EV570270       <-- TGCACCAAGTATGGCCTCTTAATCCCAAGTTTTCTCAAGGCTCTTGCAAT
FD558577       <-- TGCACCAAGTATGGCCTCTTAATCCCAAGTTTTCTCAAGGCTCTTGCAAT
EV570355       <-- TGCACCAAGTATGGCCTCTTAATCCCAAGTTTTCTCAAGGCTCTTGCAAT
EY916309       <-- TGCACCAAGTATGGCCTCTTAATCCCAAGTTTTCTCAAGGCTCTTGCAAT
FD549152       <-- TGCACCAAGTATGGCCTCTTAATCCCAAGTTTTCTCAAGGCTCTTGCAAT
FD956837       <-- TGCACCAAGTATGGCCTCTTAATCCCAAGTTTTCTCAAGGCTCTTGCAAT
FD952638       --> TGCACCAAGTATGGCCTCTTAATCCCAAGTTTTC................
EY912008       --> TGCACCAAGTATGGCCTCTTAATCCCAAGTTTTCTCAAGGCTCTTGCAAT
FD583963       --> TGCACCAAGCATGGCCTCTTAATCCCAAGTTTCCTCAAAGCCCTTGCAAT
EV574665       --> TGCACCAAGTATGGCCTCTTAATCCCAAGTTTTCTCAAGGCTCTTGCAAT
FD529304       --> ..................................................
FD553136       --> ..................................................
EV574606       --> ..................................................

               701    -    751
UN19691        --> GCCCTTAGAGCGAGTTCCATCAGCATCCATAACAATGACCTTTGACCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD988775       <-- ..................................................
FD988819       <-- ..................................................
FD556922       <-- ..................................................
FD558975       <-- GCCCTTAGAGCGAGTTCCATCAGCATCCATAACAATGACCTTTGACCTGT
EV570270       <-- GCCCTTAGAGCGAGTTCCATCAGCATCCATAACAATGACCTTTGACCTGT
FD558577       <-- GCCCTTAGAGCGAGTTCCATCAGCATCCATAACAATGACCTTTGACCTGT
EV570355       <-- GCCCTTAGAGCGAGTTCCATCAGCATCCATAACAATGACCTTTGACCTGT
EY916309       <-- GTCCTTAGAGCGAGTTCCATCAGCATCCATAACAATGACCTTGGACCTAT
FD549152       <-- GCCCTTAGAGCGAGTTCCATCAGCATCCATAACAATGACCTTGGACCTAT
FD956837       <-- GCCCTTAGAGCGAGTTCCATCAGCATCCATAACAATGACCTTTGACCTGT
FD952638       --> ..................................................
EY912008       --> GTCCTTAGAGCGAGTTCCATCAGCATCCATAACAATGACCTTGGACCTAT
FD583963       --> GCCCTTAGAGCGAGTTCCATCAGCATCC......................
EV574665       --> GCCCTTAGAGCGAGTTCCATCAGCATCCATAACAATGACCTTTGACCTGT
FD529304       --> ..................................................
FD553136       --> ..................................................
EV574606       --> ..................................................

               751    -    801
UN19691        --> CCTGAACTGCTTTCAAATTCTTGATGATAACTGCCGTCAAGGCATCTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD988775       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD988819       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD556922       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD558975       <-- CCTGAACTGCTTTCAAATTCTTGATGATAACTc.................  Raphanus raphanistrum subsp. landra
EV570270       <-- CCTGAACTGCTTTCAAATTCTTGATGATAACTGCCGTCAAGGCATCTTCA  Raphanus raphanistrum subsp. landra
FD558577       <-- CCTGAACTGCTTTCAAATTCTTGATGATAACTGCCGTCAAGGCATCTTCA  Raphanus raphanistrum subsp. landra
EV570355       <-- CCTGAACTGCTTTCAAATTCTTGATGATAACTGCCGTCAAGGCATCTTCA  Raphanus raphanistrum subsp. landra
EY916309       <-- CCTGAACTGCTTTCAAATTCTTGATGATAACTGCCGCCAATGCATCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD549152       <-- CCTGAACTGCTTTCAAATTCTTGATGATAACTGCCGCCAATGCATCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD956837       <-- CCTGAACTGCTTTCAAATTCTTGATGATAACTGCCGCCAAGGCATCTTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD952638       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY912008       --> CCTGAACTGCTTTCAAATTCTTGAT.........................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD583963       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV574665       --> CCTGAACTGCTTTCAAATTCTTGATGATAACTGCCGTCAAGGCATCTTCA  Raphanus raphanistrum subsp. landra
FD529304       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD553136       --> ..................................................  Raphanus raphanistrum subsp. landra
EV574606       --> ..................................................  Raphanus raphanistrum subsp. landra

               801    -    851
UN19691        --> ACTTCTCTTCCACCTCTCAGTAGCCGTTTAACATCACCGTCAACCTCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD988775       <-- ..................................................
FD988819       <-- ..................................................
FD556922       <-- ..................................................
FD558975       <-- ..................................................
EV570270       <-- ACTTCTCTTCCACCTCTCAGTAGCCGTTTAACATCACCGTCAACCTCAGG
FD558577       <-- ACTTCTCTTCCACCTCTCAGTAGCCGTTTAACATCACCGTCAACCTCAGG
EV570355       <-- ACTTCTCTTCCACCTCTCAGTAGCCGTTTAACATCACCGTCAACCTCAGG
EY916309       <-- ACTTCTCTTCCACCTCTC................................
FD549152       <-- ACTTCTCTTCCACCTCTCAGTAGCCGTTTAACATCACCGGCAACCTCAGG
FD956837       <-- ACTTCTCTTCCACCTCTCAGTAGCCGTTTAACATCACCGTCAACCTCAGG
FD952638       --> ..................................................
EY912008       --> ..................................................
FD583963       --> ..................................................
EV574665       --> ACTTCTCTTCCACCTCTCAGTAGCCGTTTAACATCACCG...........
FD529304       --> ..................................................
FD553136       --> ..................................................
EV574606       --> ..................................................

               851    -    901
UN19691        --> AAGTGTCACACTAGAATATCGGAAACGAGCTCCTCTCCGCAGATCAGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD988775       <-- ..................................................
FD988819       <-- ..................................................
FD556922       <-- ..................................................
FD558975       <-- ..................................................
EV570270       <-- AAGTGTCACACTAGAATATCGGAAACGAGCTCCTCTCCGCAGATCAGGGA
FD558577       <-- AAGTGTCACACTAGAATATCGGAAACGAGCTCCTCTCCGCAGATCAc...
EV570355       <-- AAGTGTCACACTAGAATATCGGAAACGAGCTCCTCTCCGCAGATCAGGGA
EY916309       <-- ..................................................
FD549152       <-- CAGTGTCACACTAGAATATCGGAAACGAGCTCCTCTCCGCAGATCAGGGA
FD956837       <-- TAGTGTCACACTAGAATATCGGAAACGAGCTCCTCTCCGCAGATCAGGGA
FD952638       --> ..................................................
EY912008       --> ..................................................
FD583963       --> ..................................................
EV574665       --> ..................................................
FD529304       --> ..................................................
FD553136       --> ..................................................
EV574606       --> ..................................................

               901    -    951
UN19691        --> TTCCATCTTTCTCTCTCAATGCCTCAGACCTCACATCAACGAGCACTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD988775       <-- ..................................................
FD988819       <-- ..................................................
FD556922       <-- ..................................................
FD558975       <-- ..................................................
EV570270       <-- TTCCATCTTTCTCTCTCAATGCCTCAGACCTC..................
FD558577       <-- ..................................................
EV570355       <-- TTCCATCTTTCTCTCTCAATGCCTCAGACCTC..................
EY916309       <-- ..................................................
FD549152       <-- TTCCATCTTTCTCTCTCAAGGCCTCAGGCCTTACATCAACGAGCACTGGC
FD956837       <-- TTCCATCTTTCTCTCTCAATGCCTCAGACCTGACATCAACGAGCACTGGC
FD952638       --> ..................................................
EY912008       --> ..................................................
FD583963       --> ..................................................
EV574665       --> ..................................................
FD529304       --> ..................................................
FD553136       --> ..................................................
EV574606       --> ..................................................

               951    -   1001
UN19691        --> TTTTCTCTAGACGTTAC
                   ~~~~~~~~~~~~~~~~~
FD988775       <-- .................
FD988819       <-- .................
FD556922       <-- .................
FD558975       <-- .................
EV570270       <-- .................
FD558577       <-- .................
EV570355       <-- .................
EY916309       <-- .................
FD549152       <-- TTTTCTCTCGAC.....
FD956837       <-- TTTTCTCTAGACGTTAC
FD952638       --> .................
EY912008       --> .................
FD583963       --> .................
EV574665       --> .................
FD529304       --> .................
FD553136       --> .................
EV574606       --> .................