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Alignment for radish unigene UN19710

               1      -     51
UN19710        --> AGTTAACTACGAGTTGGGTAGATATAAATTGATTAAATAAACTTCCAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- ...................gGATATAAATTGATTAAATAAACTTCCAAGT
EW713526       <-- ..................................................
EW713525       <-- ..................................................
FD979407       <-- ..................................................
FY431039       <-- ..................................................
FY430378       <-- ..................................................
EY901217       <-- ..................................................
FD535643       <-- ..................................................
EW716308       <-- ..................................................
EX748774       <-- ..................................................
FD561385       <-- ..................................................
EW718371       --> AGTTAACTACGAGTTGGGTAGATATAAATTGATTAAATAAACTTCCAAGT
EW718631       --> AGTTAACTACGAGTTGGGTAGATATAAATTGATTAAATAAACTTCCAAGT
EV531425       --> ...................gGATATAAATTGATTAAATAAACTTCCAAGT
EY896579       --> ....................ggTATAAATTGATTAAATAAACTTCCAAGT
EW721554       --> .....................................TAAACTTCCAAGT
FD975447       --> .....................................TAAACTTCCAAGT
FD531261       --> ..................................................
FY437509       --> ..................................................

               51     -    101
UN19710        --> ATTCGAAACATTGCTTATGTATTAAAGACGAACATAACATCTTCTGATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- AT-CGAAACATTGCTTATGTATTAAAGACGAACATAACATCTTCTGATCT
EW713526       <-- ...............TATGTATTAAAGACGAACATAACATCTTCTGGTCT
EW713525       <-- ............................................ctggtc
FD979407       <-- ..................................................
FY431039       <-- ..................................................
FY430378       <-- ..................................................
EY901217       <-- ..................................................
FD535643       <-- ..................................................
EW716308       <-- ..................................................
EX748774       <-- ..................................................
FD561385       <-- ..................................................
EW718371       --> ATTCGAAACATTGCTTATGTATTAAAGACGAACATAACATCTTCTGGTCT
EW718631       --> ATTCGAAACATTGCTTATGTATTAAAGACGAACATAACATCTTCTGGTCT
EV531425       --> ATTCGAAACATTGCTTATGTATTAAAGACGAACATAACATCTTCTGATCT
EY896579       --> ATTCGAAACATTGCTTATGTATTAAAGACGAACATAACATCTTCTGATCT
EW721554       --> ATTCGAAACATTGCTTATGTATTAAAGACGAACATAACATCTTCTGATCT
FD975447       --> ATTCGAAACATTGCTTATGTATTAAAGACGAACATAACATCTTCTGATCT
FD531261       --> ...CGAAACATTGCTTATGTATTAAAGACGAACATAACATCTTCTGATCT
FY437509       --> ...........TGCTTATGTATTAAAGACGAACATAACATCTTCTGATCT

               101    -    151
UN19710        --> TAATCCGACCAAAACCAAACCAACAGACAAACAGTCTGATAAACAAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- TAATCCGACCAAAACCAAACCAACAGACAAACAGTCTGATAAACAAGAAG
EW713526       <-- -AATCCGACCAAAACCAAACCAACAG--AAACAGTCTGATAAACAAGAAG
EW713525       <-- TAATCCGACCAAAACCAAACCAACAG--AAACAGTCTGATAAACAAGAAG
FD979407       <-- ..................................................
FY431039       <-- ..................................................
FY430378       <-- ..................................................
EY901217       <-- ..................................................
FD535643       <-- ..................................................
EW716308       <-- ..................................................
EX748774       <-- ..................................................
FD561385       <-- ..................................................
EW718371       --> -AATCCGACCAAAACCAAACCAACAGA--AACAGTCTGATAAACAAGAAG
EW718631       --> -AATCCGACCAAAACCAAACCAACAGA--AACAGTCTGATAAACAAGAAG
EV531425       --> TAATCCGACCAAAACCAAACCAACAGACAAACAGTCTGATAAACAAGAAG
EY896579       --> TAATCCGACCAAAACCAAACCAACAGACAAACAGTCTGATAAACAAGAAG
EW721554       --> -AATCCGACCAAAACCAAACCAACAGACAAACAGTCTGATAAACAAGAAG
FD975447       --> TAATCCGACCAAAACCAAACCAACAGACAAACAGTCTGATAAACAAGAAG
FD531261       --> TAATCCGACCAAAACCAAACCAACAGACAAACAGTCTGATAAACAAGAAG
FY437509       --> TAATCCGACCAAAACCAAACCAACAGACAAACAGTCTGATAAACAA-AAG

               151    -    201
UN19710        --> CCATAGCAGGAAAGACGAAAA-TGAG-AAGAGTTTACGAAGGACTCGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- CCATAGCAGGAAAGACGAAAA-TGAG-AAGAGTTTACGAAGGACTCGAGA
EW713526       <-- CCATAGCAGGAAAGACGAAAAATGAG-AAGAGTTTGCGAAGGACTCGAGA
EW713525       <-- CCATAGCAGGAAAGACGAAAAATGAG-AAGAGTTTGCGAAGGACTCGAGA
FD979407       <-- ......................................AAGGACTCGAGA
FY431039       <-- ..................................................
FY430378       <-- ..................................................
EY901217       <-- ..................................................
FD535643       <-- ..................................................
EW716308       <-- ..................................................
EX748774       <-- ..................................................
FD561385       <-- ..................................................
EW718371       --> CCATAGCAGGAAAGACGAAAAATGAG-AAGAGTTTGCGAAGGACTCGAGA
EW718631       --> CCATAGCAGGAAAGACGAAAAATGAG-AAGAGTTTGCGAAGGACTCGAGA
EV531425       --> CCATAGCAGGAAAGACGAAAA-TGAG-AAGAGTTTACGAAGGACTCGAGA
EY896579       --> CCATAGCAGGAAAGACGAAAA-TGAG-AAGAGTTTACGAAGGACTCGAGA
EW721554       --> CCATAGCAAGAAAGACGAAA--TGAG-AAGAGTTTACGAAGGACTCGAGA
FD975447       --> CCATAGCAGGAAAGACGAAAA-TGAG-AAGAGTTTACGAAGGACTCGAGA
FD531261       --> CCATAGCAGGAAAGACGAAAA-TGAG-AAGAGTTTACGAAGGACTCGAGA
FY437509       --> CCATAGCAGGAAAGACAAAAA-TGAGTAGGAGTTTATGAAGGAGTCGAAA

               201    -    251
UN19710        --> CATTTTCTAAGTGGGTCTTGGAGTGGCCCACTCAACCC-TGAGGATGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- CATTTTCTAAGTGGGTCTTGGAGTGGCCCACTCAACCC-TGAGGATGAGG
EW713526       <-- CATTGTCTAAGTGGGTCTTGGAGTGGCCCACTCAACCCCTGAGGATGAGG
EW713525       <-- CATTGTCTAAGTGGGTCTTGGAGTGGCCCACTCAACCC-TGAGGATGAGG
FD979407       <-- CATTTTCTAAGTGGGTCTTGGAGTGGCCCACTCAACCC-TGAGGATGAGG
FY431039       <-- ..........................................GGATGAGG
FY430378       <-- ............................................ATGAGG
EY901217       <-- ..................................................
FD535643       <-- ..................................................
EW716308       <-- ..................................................
EX748774       <-- ..................................................
FD561385       <-- ..................................................
EW718371       --> CATTGTCTAAGTGGGTCTTGGAGTGGCCCACTCAACCC-TGAGGATGAGG
EW718631       --> CATTGTCTAAGTGGGTCTTGGAGTGGCCCACTCAACCC-TGAGGATGAGG
EV531425       --> CATTTTCTAAGTGGGTCTTGGAGTGGCCCACTCAACCC-TGAGGATGAGG
EY896579       --> CATTTTCTAAGTGGGTCTTGGAGTGGCCCACTCAACCC-TGAGGATGAGG
EW721554       --> CATTTTCTAAGTGGGTCTTGGAGTGGCCCACTCAACCC-TGAGGATGAGG
FD975447       --> CATTTTCTAAGTGGGTCTTGGAGTGGCCCACTCAACCC-TGAGGATGAGG
FD531261       --> CATTTTCTAAGTGGGTCTTGGAGTGGCCCACTCAACCC-TGAGGATGAGG
FY437509       --> CATTTTCTAAGTGGGTCTTGGAGTGGCCCACTCAACCC-TGAGGATGAGG

               251    -    301
UN19710        --> TTATCATAACCATAACCATTCAGCTTGTTGATGGCTCGTTGAGCGTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- TTATCATAACCATAACCATTCAGCTTGTTGATGGCTCGTTGGGCGTCTTC  Raphanus raphanistrum subsp. maritimus
EW713526       <-- TTATCATAACCATAACCATTCAGTTTGTTGATGGCTCGTTGAGCGTCTTC  Raphanus sativus var. oleiformis
EW713525       <-- TTATCATAACCATAACCATTCAGTTTGTTGATGGCTCGTTGAGCGTCTTC  Raphanus sativus var. oleiformis
FD979407       <-- TTATCATAACCATAACCATTCAGCTTGTTGATGGCTCGTTGGGCGTCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY431039       <-- TTATCATAACCATAACCATTCAGCTTGTTGATGGCTCGTTGAGCGTCTTC  Raphanus sativus cv GSK3-1
FY430378       <-- TTATCATAACCATAACCATTCAGCTTGTTGATGGCTCGTTGAGCGTCTTC  Raphanus sativus cv GSK3-1
EY901217       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD535643       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW716308       <-- ..................................................  Raphanus sativus var. oleiformis
EX748774       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD561385       <-- ..................................................  Raphanus sativus var. oleiformis
EW718371       --> TTATCATAACCATAACCATTCAGTTTGTTGATGGCTCGTTGAGCGTCTTC  Raphanus sativus var. oleiformis
EW718631       --> TTATCATAACCATAACCATTCAGTTTGTTGATGGCTCGTTGAGCGTCTTC  Raphanus sativus var. oleiformis
EV531425       --> TTATCATAACCATAACCATTCAGCTTGTTGATGGCTCGTTGGGCGTCTTC  Raphanus raphanistrum subsp. maritimus
EY896579       --> TTATCATAACCATAACCATTCAGCTTGTTGATGGCTCGTTGGGCGTCTTC  Raphanus raphanistrum subsp. maritimus
EW721554       --> TTATCATAACCATAACCATTCAGCTTGTTGATGGCTCGTTGAGCGTCTTC  Raphanus sativus var. oleiformis
FD975447       --> TTATCATAACCATAACCATTCAGCTTGTTGATGGCTCGTTGGGCGTCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD531261       --> TTATCATAACCATAACCATTCAGCTTGTTGATGGCTCGTTGGGCGTCTTC  Raphanus raphanistrum subsp. maritimus
FY437509       --> TTATCATAACCATAACCATTCAGCTTGTTGATGGCTCGTTGAGCGTCTTC  Raphanus sativus cv GSK3-1

               301    -    351
UN19710        --> TCTGCTCACGAAATTGACGAAACCAAACCCTCTGCTCACTCCAGTTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- TCTGCTCACGAAATTGACGAAACCAAACCCTCTGCTCACTCCAGTTTTCT  Raphanus raphanistrum subsp. maritimus
EW713526       <-- TCTGCTCACGAAATTGACGAAACCAAACCCTCTGCTCACTCCAGTTTTCT  Raphanus sativus var. oleiformis
EW713525       <-- TCTGCTCACGAAATTGACGAAACCAAACCCTCTGCTCACTCCAGTTTTCT  Raphanus sativus var. oleiformis
FD979407       <-- TCTGCTCACGAAATTGACGAAACCAAACCCTCTGCTCACTCCAGTTTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY431039       <-- TCTGCTCACGAAGTTGACGAAACCAAACCCTCTGCTCACTCCAGTTTTCT  Raphanus sativus cv GSK3-1
FY430378       <-- TCTGCTCACGAAGTTGACGAAACCAAACCCTCTGCTCACTCCAGTTTTCT  Raphanus sativus cv GSK3-1
EY901217       <-- .....................................ACTCCAGTTTTCT  Raphanus raphanistrum subsp. maritimus
FD535643       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW716308       <-- ..................................................  Raphanus sativus var. oleiformis
EX748774       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD561385       <-- ..................................................  Raphanus sativus var. oleiformis
EW718371       --> TCTGCTCACGAAATTGACGAAACCAAACCCTCTGCTCACTCCAGTTTTCT  Raphanus sativus var. oleiformis
EW718631       --> TCTGCTCACGAAATTGACGAAACCAAACCCTCTGCTCACTCCAGTTTTCT  Raphanus sativus var. oleiformis
EV531425       --> TCTGCTCACGAAATTGACGAAACCAAACCCTCTGCTCACTCCAGTTTTCT  Raphanus raphanistrum subsp. maritimus
EY896579       --> TCTGCTCACGAAATTGACGAAACCAAACCCTCTGCTCACTCCAGTTTTCT  Raphanus raphanistrum subsp. maritimus
EW721554       --> TCTGCTCACGAAGTTGACGAAACCAAACCCTCTGCTCACTCCAGTTTTCT  Raphanus sativus var. oleiformis
FD975447       --> TCTGCTCACGAAATTGACGAAACCAAACCCTCTGCTCACTCCAGTTTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD531261       --> TCTGCTCACGAAATTGACGAAACCAAACCCTCTGCTCACTCCAGTTTTCT  Raphanus raphanistrum subsp. maritimus
FY437509       --> TCTGCTCACGAAGTTGACGAAACCAAACCCTCTGCTCACTCCAGTTTTCT  Raphanus sativus cv GSK3-1

               351    -    401
UN19710        --> GATCAATCGCCACATAGACACGGGAGACAGCTCCAAACGGATGGAAGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- GATCAATCGCCACATAGACACGGGAGACAGCTCCAAACGGATGGAAGAGC
EW713526       <-- GATCAATGGCCACATAGACACGGGAGACAGCTCCAAACGGATGGAAGAGC
EW713525       <-- GATCAATGGCCACATAGACACGGGAGACAGCTCCAAACGGATGGAAGAGC
FD979407       <-- GATCAATCGCCACATAGACACGGGAGACAGCTCCAAACGGATGGAAGAGC
FY431039       <-- GATCAATCGCCACATAGACACGGGAGACAGCTCCAAACGGATGGAAGAGC
FY430378       <-- GATCAATCGCCACATAGACACGGGAGACAGCTCCAAACGGATGGAAGAGC
EY901217       <-- GATCA-TCGCCACATAGACACGGGAGACAGCTCCAAACGGATGGAAGAGC
FD535643       <-- ..................................................
EW716308       <-- ..................................................
EX748774       <-- ..................................................
FD561385       <-- ..................................................
EW718371       --> GATCAATGGCCACATAGACACGGGAGACAGCTCCAAACGGATGGAAGAGC
EW718631       --> GATCAATGGCCACATAGACACGGGAGACAGCTCCAAACGGATGGAAGAGC
EV531425       --> GATCAATCGCCACATAGACACGGGAGACAGCTCCAAACGGATGGAAGAAC
EY896579       --> GATCAATCGCCACATAGACACGGGAGACAGCTCCAAACGGATGGAAGAGC
EW721554       --> GATCAATCGCCACATAGACACGGGAGACAGCTCCAAACGGATGGAAGAGC
FD975447       --> GATCAATCGCCACATAGACACGGGAGACAGCTCCAAACGGATGGAAGAGC
FD531261       --> GATCAATCGCCACATAGACACGGGAGACAGCTCCAAACGGATGGAAGAGC
FY437509       --> GATCAATCGCCACATAGACACGGGAGACAGCTCCAAACGGATGGAAGAGC

               401    -    451
UN19710        --> TCCATCAAATCGGGTTCACGGGTGTCCTCAGACAAGTTAGTCACACGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- TCCATCAAATCGGGTTCACGGGTGTCCTCAGACAAGTTAGTCACACGCAC
EW713526       <-- TCCATCAAATCGGGTTCACGGGTGTCCTCAGACAAGTTAGTCACACGCAC
EW713525       <-- TCCATCAAATCGGGTTCACGGGTGTCCTCAGACAAGTTAGTCACACGCAC
FD979407       <-- TCCATCAAATCGGGTTCACGGGTGTCCTCAGACAAGTTAGTCACACGCAC
FY431039       <-- TCCATCAAATCGGGTTCACGGGTGTCCTCAGACAAGTTAGTCACACGCAC
FY430378       <-- TCCATCAAATCGGGTTCACGGGTGTCCTCAGACAAGTTAGTCACACGCAC
EY901217       <-- TCCATCAAATCGGGTTCACGGGTGTC-TCAGACAAGTTAGTCACACGCAC
FD535643       <-- ..................................................
EW716308       <-- ..................................................
EX748774       <-- ..................................................
FD561385       <-- ..................................................
EW718371       --> TCCATCAAATCGGGTTCACGGGTGTCCTCAGACAAGTTAGTCACACGCAC
EW718631       --> TCCATCAAATCGGGTTCACGGGTGTCCTCAGACAAGTTAGTCACACGCAC
EV531425       --> TCCATCAAATCGGGTTCACGGGTGTCCTCAGACAAGTTAGTCACACGCAC
EY896579       --> TCCATCAAATCGGGTTCACGGGTGTCCTCAGACAAGTTAGTCACACGCAC
EW721554       --> TCCATCAAATCGGGTTCACGGGTGTCCTCAGACAAGTTAGTCACACGCAC
FD975447       --> TCCATCAAATCGGGTTCACGGGTGTCCTCAGACAAGTTAGTCACACGCAC
FD531261       --> TCCATCAAATCGGGTTCACGGGTGTCCTCAGACAAGTTAGTCACACGCAC
FY437509       --> TCCATCAAATCGGGTTCACGGGTGTCCTCAGACAAGTTAGTCACACGCAC

               451    -    501
UN19710        --> AGAGTTCTCATCGTTCCTCCTCCTCATGTCCGAACCACCAGTGCTTCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- AGAGTTCTCATCGTTCCTCCTCCTCATGTCCGAACCACCAGTGCTTCTGT
EW713526       <-- AGAGTTCTCATCGTTCCTCCTCCTCATGTCCGAACCACCAGTGCTTCTGT
EW713525       <-- AGAGTTCTCATCGTTCCTCCTCCTCATGTCCGAACCACCAGTGCTTCTGT
FD979407       <-- AGAGTTCTCATCGTTCCTACTCCTCATGTCCGAACCACCAGTGCTTCTGT
FY431039       <-- AGAGTTCTCATCGTTCCTCCTCCTCATGTCCGAACCACCAGTGCTTCTGT
FY430378       <-- AGAGTTCTCATCGTTCCTCCTCCTCATGTCCGAACCACCAGTGCTTCTGT
EY901217       <-- AGAGTTCTCATCGTTC-TCCTC-TCATGTCCGAACCACCAGTGCTTCTGT
FD535643       <-- .........................ATGTCCGAACCACCAGTGCTTCTGT
EW716308       <-- ............................TCCGAACCACCAGTGCTTCTGT
EX748774       <-- ..................................................
FD561385       <-- ..................................................
EW718371       --> AGAGTTCTCATCGTTCCTCCTCCTCATGTCCGAACCACCAGTGCTTCTGT
EW718631       --> AGAGTTCTCATCGTTCCTCCTCCTCATGTCCGAACCACCAGTGCTTCTGT
EV531425       --> AGAGTTCTCATCGTTCCTCCTCCTCATGTCCGAACCACCAGTGCTTCTGT
EY896579       --> AGAGTTCTCATCGTTCCTCCTCCTCATGTCCGAACCACCAGTGCTTCTGT
EW721554       --> AGAGTTCTCATCGTTCCTCCTCCTCATGTCCGAACCACCAGTGCTTCTGT
FD975447       --> AGAGTTCTCATCGTTCCTACTCCTCATGTCCGAACCACCAGTGCTTCTGT
FD531261       --> AGAGTTCTCATCGTTCCTCCTCCTCATGTCCGAACCACCAGTGCTTCTGT
FY437509       --> AGAGTTCTCATCGTTCCTCCTCCTCATGTCCGAACCACCAGTGCTTCTGT

               501    -    551
UN19710        --> CTGCACCTGCTCTCATGCTAGGAGGCACATAAGCGGCCTTGCCACCAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- CTGCACCTGCTCTCATGCTAGGAGGCACATAAGCGGCCTTGCCACCAGGT
EW713526       <-- CTGCACCTGCTCTCATGCTAGGAGGCACATAAGCGGCCTTGCCACCAGGT
EW713525       <-- CTGCACCTGCTCTCATGCTAGGAGGCACATAAGCGGCCTTGCCACCAGGT
FD979407       <-- CTGCACCTGCTCTCATGCTAGGAGGCACATAAGCGGCCTTGCCACCAGGT
FY431039       <-- CTGCACCTGCTCTCATGCTAGGAGGCACATAAGCGGCCTTGCCACCAGGT
FY430378       <-- CTGCACCTGCTCTCATGCTAGGAGGCACATAAGCGGCCTTGCCACCAGGT
EY901217       <-- CTGCAC-TGCTCTCATGCTAGGAGGCACATAAGCGGCCTTGCCACCAGGT
FD535643       <-- CTGCACCTGCTCTCATGCTAGGAGGCACATAAGCGGCCTTGCCACCAGGT
EW716308       <-- CTGCAC-TGCTCTCATGCTAGGAGGCACATAAGCGGCCTTGCCACCAGGT
EX748774       <-- ...........................................ACCAGGT
FD561385       <-- ..................................................
EW718371       --> CTGCACCTGCTCTCATGCTAGGAGGCACATAAGCGGCCTTGCCACCAGGT
EW718631       --> CTGCACCTGCTCTCATGCTAGGAGGCACATAAGCGGCCTTGCCACCAGGT
EV531425       --> CTGCACCTGCTCTCATGCTAGGAGGCACATAAGCGGCCTTGCCACCAGGT
EY896579       --> CTGCACCTGCTCTCATGCTAGGAGGCACATAAGCGGCCTTGCCACCAGGT
EW721554       --> CTGCACCTGCTCTCATGCTAGGAGGCACATAAGCGGCCTTGCCACCAGGT
FD975447       --> CTGCACCTGCTCTCATGCTAGGAGGCACATAAGCGGCCTTGCCACCAGGT
FD531261       --> CTGCACCTGCTCTCATGCTAGGAGGCACATAAGCGGCCTTGCCACCAGGT
FY437509       --> CTGCACCTGCTCTCATGCTAGGAGGCACATAAGCGGCCTTGCCACCAGGT

               551    -    601
UN19710        --> GCAGCGGGTACGGCAGATGTTTCTCCTGTGGGTGGCTTGTCGACAAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- GCAGCGGGTACGGCAGATGTTTCTCCTGTGGGTGGCTTGTCGACAAAGAC
EW713526       <-- GCAGCGGGTGCGGCAGATGTTT-TCCAGTGGGTGGCTTGTCGACAAAGAC
EW713525       <-- GCAGCGGGTGCGGCAGATGTTT-TCCAGTGGGTGGCTTGTCGACAAAGAC
FD979407       <-- GCAGAGGGTACGGCAGATGTTTCTCCTGTGGGTGGCTTGTCGACAAAGAC
FY431039       <-- GCAGCGGGTACGGCAGATGTTTCTCCTGTGGGTGGCTTGTCGACAAAGAC
FY430378       <-- GCAGCGGGTACGGCAGATGTTTCTCCTGTGGGTGGCTTGTCGACAAAGAC
EY901217       <-- GCAGCGGGTACGGCAGATGTTTCTCCTGTGGGTGGCTTGTCGACAAAGAC
FD535643       <-- GCAGCGGGTACGGCAGATGTTTCTCCTGTGGGTGGCTTGTCGACAAAGAC
EW716308       <-- GCAGCGGGTACGGCAGATGTTTCTCCTGTGGGTGGCTTGTCGACAAAGAC
EX748774       <-- GCAGCGGGTACGGCAGATGTTTCTCCTGTGGGTGGCTTGTCGACAAAGAC
FD561385       <-- ..................................................
EW718371       --> GCAGCGGGTGCGGCAGATGTTT-TCCAGTGGGTGGCTTGTCGACAAAGAC
EW718631       --> GCAGCGGGTGCGGCAGATGTTT-TCCAGTGGGTGGCTTGTCGACAAAGAC
EV531425       --> GCAGCGGGTACGGCAGATGTTTCTCCTGTGGGTGGCTTGTCGACAA....
EY896579       --> GCAGCGGGTACGGCAGATGTTTCTCCTGTGGGTGGCTTGTCGACAAAGAC
EW721554       --> GCAGCGGGTACGGCAGATGTTTCTCCTGTGGGTGGCTTGTCGACAAAGAC
FD975447       --> GCAGAGGGTACGGCAGATGTTTCTCCTGTGGGTGGCTTGTCGACAAAGAC
FD531261       --> GCAGCGGGTACGGCAGATGTTTCTCCTGTGGGTGGCTTGTCGACAAAGAC
FY437509       --> GCAGCGGGTACGGCAGATGTTTCTCCTGTGGGTGGCTTGTCGACAAAGAC

               601    -    651
UN19710        --> ATCGGTTGGTGCAGCTAGATCCTTGTAAGGACATTTTGATGTCCAATGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- ATCGGTTGGTGCAGCTAGATCCTTGTAAGGACATTTTGATGTCCAATGGT
EW713526       <-- ATCGGTTGGTGCAGCTAGATCCTTGTAAGGACACTTTGATGTCCAATGGT
EW713525       <-- ATCGGTTGGTGCAGCTAGATCCTTGTAAGGACACTTTGATGTCCAATGGT
FD979407       <-- ATCGGTTGGTGCAGCTAGATCCTTGTAAGGACATTTTGATGTCCAATGGT
FY431039       <-- ATCGGTTGGTGCAGCTAGATCCTTGTAAGGACATTTTGATGTCCAATGGT
FY430378       <-- ATCGGTTGGTGCAGCTAGATCCTTGTAAGGACATTTTGATGTCCAATGGT
EY901217       <-- ATCGGTTGGTGCAGCTAGATCCTTGTAAGGACATTTTGATGTCCAATGGT
FD535643       <-- ATCGGTTGGTGCAGCTAGATCCTTGTAAGGACATTTTGATGTCCAATGGT
EW716308       <-- ATCGGTTGGTGCAGCTAGATCCTTGTAAGGACATTTTGATGTCCAATGGT
EX748774       <-- ATCGGTTGGTGCAGCTAGATCCTTGTAAGGACATTTTGATGTCCAATGGT
FD561385       <-- ..................................................
EW718371       --> ATCGGTTGGTGCAGCTAGATCCTTGTAAGGACACTTTGATGTCCAATGGT
EW718631       --> ATCGGTTGGTGCAGCTAGATCCTTGTAAGGACACTTTGATGTCCAATGGT
EV531425       --> ..................................................
EY896579       --> ATCGGTTGGTGCAGCTAGATCCTTGTAAGGACATTTTGATGTCCAATGGT
EW721554       --> ATCGGTTGGTGCAGCTAGATCCTTGTAAGGACATTTTGATGTCCAATGGT
FD975447       --> ATCGGTTGGTGCAGCTAGATCCTTGTAAGGACATTTTGATGTCCAATGGT
FD531261       --> ATCGGTTGGTGCAGCTAGATCCTTGTAAGGACATTTTGATGTCCAATGGT
FY437509       --> ATCGGTTGGTGCAGCTAGATCCTTGTAAGGACATTTTGATGTCCAATGGT

               651    -    701
UN19710        --> CACCTTTCTTGCCGCATGTCCTGCAAACCATGAGGACTGCACCTTTACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- CACCTTTCTTGCCGCATGTCCTGCAAACCATGAGGACTGCACCTTTACTC
EW713526       <-- CACCTTTCTTGCCGCATGTCCTGCAAACCATGAGGACTGCACCTTTACTC
EW713525       <-- CACCTTTCTTGCCGCATGTCCTGCAAACCATGAGGACTGCACCTTTACTC
FD979407       <-- CACCTTTCTTGCCGCATGTCCTGCAAACCATGAGGACTGCACCTTTACTC
FY431039       <-- CACCTTTCTTGCCGCATGTCCTGCAAACCATGAGGACTGCACCTTTACTC
FY430378       <-- CACCTTTCTTGCCGCATGTCCTGCAAACCATGAGGACTGCACCTTTACTC
EY901217       <-- CACCTTTCTTGCCGCATGTCCTGCAAACCATGAGGACTGCACCTTTACTC
FD535643       <-- CACCTTTCTTGCCGCATGTCCTGCAAACCATGAGGACTGCACCTTTACTC
EW716308       <-- CACCTTTCTTGCCGCATGTCCTGCAAACCATGAGGACTGCACCTTTACTC
EX748774       <-- CACCTTTCTTGCCGCATGTCCTGCAAACCATGAGGACTGCACCTTTACTC
FD561385       <-- ..................................................
EW718371       --> CACCTTTCTTGCCGCATGTCCTGCAAACCATGAGGACTGCACCTTTACTC
EW718631       --> CACCTTTCTTGCCGCATGTCCTGCAAACCATGAGGACTGCACCTTTACTC
EV531425       --> ..................................................
EY896579       --> CACCTTTCTTGCCGCATGTCCTGCAAACCATGAGGACTGCACCTTTACTC
EW721554       --> CACCTTTCTTGCCGCATGTCCTGCAAACCATGAGGACTGCACCTTTACTC
FD975447       --> CACCTTTCTTG.......................................
FD531261       --> CACCTTTCTTGCCGCATGTCCTGCAAACCATGAGGACTGCACCTTTACTC
FY437509       --> CACCTTTCTTGCCGCATGTCCTGCAAACCATGAGGACTGCACCTTTACTC

               701    -    751
UN19710        --> AGCTGAGACAAGCCGTCTCCTGCTGCCTTTGATTCATCTGCTTTGGTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- AGCTGAGACAAGCCGTCTCCTGCTGCCTTTGAT.................
EW713526       <-- AGCTGAGACAAGCCGTCTCCTGCTGCCTTTGATTCATCTGCTTTGGTACC
EW713525       <-- AGCTGAGACAAGCCGTCTCCTGCTGCCTTTGATTCATCTGCTTTGGTACC
FD979407       <-- AGCTGAGACAAGCCGTCTCCTGCTGCCTTTGATTCATCTGCTTTGGTACC
FY431039       <-- AGCTGAGACAAGCCGTCTCCTGCTGCCTTTGATTCATCTGCTTTGGTACC
FY430378       <-- AGCTGAGACAAGCCGTCTCCTGCTGCCTTTGATTCATCTGCTTTGGTACC
EY901217       <-- AGCTGAGACAAGCCGTCTCCCGCTGCCTTTGATTCATCTGCTTTGGTACC
FD535643       <-- AGCTGAGACAAGCCGTCTCCTGCTGCCCTTGATTCATCTGCTTTGGTACC
EW716308       <-- AGCTGAGACAAGCCGTCTCCTGCTGCCTTTGATTCATCTGCTTTGGTACC
EX748774       <-- AGCTGAGACAAGCCGTCTCCTGCTGCCTTTGATTCATCTGCTTTGGTACC
FD561385       <-- ..................................................
EW718371       --> AGCTGAGACAAGCCGTCTCCTGCTGCCTTTGATTCATCTGCTTTGGTACC
EW718631       --> AGCTGAGACAAGCCGTCTCCTGCTGCCTTTGATTCATCTGCTTTGGTACC
EV531425       --> ..................................................
EY896579       --> AGCTGAGACAAGCCGTCTCCCGCTGCCTTTGATTCATCTGCTTTGGTACC
EW721554       --> AGCTGAGACAAGCCGTCTCCTGCTGCCTTTGATTCATCTGCTTTGGTACC
FD975447       --> ..................................................
FD531261       --> AGCTGAGACAAGCCGTCTCCTGCTGCCCTTGATTCATCTGCTTTGGTACC
FY437509       --> AGCTGAGACAAGCCGTCTCCTGCTGCCTTTGATTCATCTGCTTTGGTACC

               751    -    801
UN19710        --> AGGAGCCCTAGGTCGTTCCAGAAGAATCTCTTCGGTCGAAACCATGGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- ..................................................
EW713526       <-- AGGAGCCCTAGGTCGTTCCAGAAGAATCTCTTCGGTCGAAACCATGGTGA
EW713525       <-- AGGAGCCCTAGGTCGTTCCAGAAGAATCTCTTCGGTCGAAACCATGGTGA
FD979407       <-- AGGAGCCCTAGGTCGTTCCAGAAGAATCTCTTCGGTCGAAACCATGGTGA
FY431039       <-- AGGAGCCCTAGGTCGTTCCAGAAGAATCTCTTCGGTCGAAACCATGGTGA
FY430378       <-- AGGAGCCCTAGGTCGTTCCAGAAGAATCTCTTCGGTCGAAACCATGGTGA
EY901217       <-- AGGAGCCCTAGGTCGTTCCAGAAGAATCTCTTCGGTCGAAACCATGGTGA
FD535643       <-- AGGAGCCCTAGGTCGTTCCAGAAGAATCTCTTCGGTCGAAACCATGGTGA
EW716308       <-- AGGAGCCCTAGGTCGTTCCAGAAGAATCTCTTCGGTCGAAACCATGGTGA
EX748774       <-- AGGAGCCCTAGGTCGTTCCAGAAGAATCTCTTCGGTCGAAACCATGGTGA
FD561385       <-- ..................................................
EW718371       --> AGGAGCCCTAGGTCGTTCCAGAAGAATCTCTTCGGTCGAAACCATGGTGA
EW718631       --> AGGAGCCCTAGGTCGTTCCAGAAGAATCTCTTCGGTCGAAACCATGGTGA
EV531425       --> ..................................................
EY896579       --> AGGAGCC...........................................
EW721554       --> AGGAGCCCTAGtcgt...................................
FD975447       --> ..................................................
FD531261       --> AGGAGCCCTAGGTCGTTCCAGAAGAATCTCTTCGGTCGAAACCATGGTGA
FY437509       --> AGGAGCCCTAGGTCGTTCCAGAAGAATCTCTTCGGTCGAAACCATGGTGA

               801    -    851
UN19710        --> GATGGCTACCAGCGTCCTCGTTCGCGGCGTCTCCGAACTTAGGCCAGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- ..................................................
EW713526       <-- GATGGCTACCAGCGTCCTCGTTCGCGGCGTCTCCGAACTTAGGCCAGCTC
EW713525       <-- GATGGCTACCAGCGTCCTCGTTCGCGGCGTCTCCGAACTTAG........
FD979407       <-- GATGGCTACCAGCGTCCTCGTTCGCGGCGTCTCCGAACTTAGGCCAGCTC
FY431039       <-- GATGGCTACCAGCGTCCTCGTTCGCGGCGTCTCCGAACTTAGGCCAGCTC
FY430378       <-- GATGGCTACCAGCGTCCTCGTTCGCGGCGTCTCCGAACTTAGGCCAGCTC
EY901217       <-- GATGGCTACCAGCGTCCTCGTTCGCGGCGTCTCCGAACTTAGGCCAGCTC
FD535643       <-- GATGGCTACCAGCGTCCTCGTTCGCGGCGTCTCCGAACTTAGGCCAGCTC
EW716308       <-- GATGGCTACCAGCGTCCTCGTTCGCGGCGTCTCCGAACTTAGGCCAGCTC
EX748774       <-- GATGGCTACCAGCGTCCTCGTTCGCGGCGTCTCCGAACTTAGGCCAGCTC
FD561385       <-- ..................................................
EW718371       --> GATGGCTACCAGCGTCCTCGTTCGCGGCGTCTCCGAACTTAG-CCAGCTC
EW718631       --> GATGGCTACCAGCGTCCTCGTTCGCGGCGTCTCCGAACTTAGGCCAGCTC
EV531425       --> ..................................................
EY896579       --> ..................................................
EW721554       --> ..................................................
FD975447       --> ..................................................
FD531261       --> GATGGCTACCAGCGTCCTCGTTCGCGGCGTCTCCGAACTTAGcca.....
FY437509       --> GATGGCTACCAGCGTCCTCGTTCGCGGCGTCTCCGAACTTAGGCCAGCTC

               851    -    901
UN19710        --> CTCCGCTCCATGGCTCGTTTGTTGAGCCTCGCGGAAGCTAGCTTACGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW713526       <-- CTCCGCTCCATGGCTCGTTTGTTGAGCCTCGCGGAAGCTAGCTTcccc..  Raphanus sativus var. oleiformis
EW713525       <-- ..................................................  Raphanus sativus var. oleiformis
FD979407       <-- CTCCGCTCCATGGCTCGTTTGTTGAGCCTCGCGGAGGCTAGCTTACGGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY431039       <-- CTCCGCTCCATGGCTCGTTTGTTGAGCCTCGCGGAAGCTAGCTTACGGAC  Raphanus sativus cv GSK3-1
FY430378       <-- CTCCGCTCCATGGCTCGTTTGTTGAGCCTCGCGGAAGCTAGCTTACGGAC  Raphanus sativus cv GSK3-1
EY901217       <-- CTCCGCTCCATGGCTCGTTTGTTGAGCCTCGCGGAGGCTAGCTTACGGAC  Raphanus raphanistrum subsp. maritimus
FD535643       <-- CTCCGCTCCATGGCTCGTTTGTTGAGCCTCGCGGAGGCTAGCTTACGGAC  Raphanus raphanistrum subsp. maritimus
EW716308       <-- CTCCGCTCCATGGCTCGTTTGTTGAGCCTCGCGGAAGCTAGCTTACGGAC  Raphanus sativus var. oleiformis
EX748774       <-- CTCCGCTCCATGGCTCGTTTGTTGAGCCTCGCGGAGGCTAGCTTACGGAC  Raphanus raphanistrum subsp. maritimus
FD561385       <-- ..CCGCTCCATGGCTCGTTTGTTGAGCCTCGCGGAAGCTAGCTTACGGAC  Raphanus sativus var. oleiformis
EW718371       --> CTCCGCTCCATGGCTCGTTTGTTGAGCCTCGCGGAAGCTAGCTTc.....  Raphanus sativus var. oleiformis
EW718631       --> CTCCGCTCCATGGCTCGTTTGTTGAGCCTCGCGGAAGCTAGCTTc.....  Raphanus sativus var. oleiformis
EV531425       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY896579       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW721554       --> ..................................................  Raphanus sativus var. oleiformis
FD975447       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD531261       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY437509       --> CTCCGCTCCATGGCTCGTTTGTTGAGCCTCGCGGAAGCTAGCTTACGGAC  Raphanus sativus cv GSK3-1

               901    -    951
UN19710        --> GCGTGACCTGGTCGTGATCTTGACCTTGTTGCCTTCGTCGTTGAACTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- ..................................................
EW713526       <-- ..................................................
EW713525       <-- ..................................................
FD979407       <-- GCGTGACCTGGTCc....................................
FY431039       <-- GCGTGACCTGGTCGTGATCTTGACCTTGTTGCCTTCGTCGTTGAACTTGT
FY430378       <-- GCGTGACCTGGTCGTGATCTTGACCTTGTTGCCTTCGTCGTTGAACTTGT
EY901217       <-- GCGTGACCTGGTCGTGATCTTGACCTTGTTGCCTTCGTCGTTGAACTTGT
FD535643       <-- GCGTGACCTGGTCGTGATCTTGACCTTGTTGCCTTCGTCGTTGAACTTGT
EW716308       <-- GCGTGACCTGGTCGTGATCTTGACCTCGTTGCCTTCGTCGTTGAACTTGT
EX748774       <-- GCGTGACCTGGTTGTGATCTTGACCTTGTTGCCTTCGTCGTTGAACTTGT
FD561385       <-- GCGTGACCTGGTCGTGATCTTGACCTTGTTGCCTTCGTCGTTGAACTTGT
EW718371       --> ..................................................
EW718631       --> ..................................................
EV531425       --> ..................................................
EY896579       --> ..................................................
EW721554       --> ..................................................
FD975447       --> ..................................................
FD531261       --> ..................................................
FY437509       --> GCGTGACCTGGTCGTGATCTTGACCTTGTTGCCTTCGTCGT.........

               951    -   1001
UN19710        --> ACTCGATCACCGTCTTCAACCCGTTCTCGTCTGGGCCGATCACCTGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW713526       <-- ..................................................  Raphanus sativus var. oleiformis
EW713525       <-- ..................................................  Raphanus sativus var. oleiformis
FD979407       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY431039       <-- ACTCGATCACCGTCTTCAACCCGTTCTCGTCTGGGCCGATCACCTGCTTC  Raphanus sativus cv GSK3-1
FY430378       <-- ACTCGATCACCGTCTTCAACCCGTTCTCGTCTGGGCCGATCACCTGCTTC  Raphanus sativus cv GSK3-1
EY901217       <-- ACTCGATCACCGTCTTCAACCCGTTCTCGTCTGGGCCAATCACCTGCTTC  Raphanus raphanistrum subsp. maritimus
FD535643       <-- ACTCGATCACCGTCTTCAACCCGTTCTCGTCTGGGCCAATCACCTGCTTC  Raphanus raphanistrum subsp. maritimus
EW716308       <-- ACTCGATCACCGTCTTCAACCCGTTCTCGTCTGGGCCGATCACCTGCTTC  Raphanus sativus var. oleiformis
EX748774       <-- ACTCGATCACCGTCTTCAACCCGTTCTCGTCTGGGCCAATCACCTGCTTC  Raphanus raphanistrum subsp. maritimus
FD561385       <-- ACTCGATCACCGTCTTCAATCCATTCTCGTCTGGGCCGATCACCTGCTTG  Raphanus sativus var. oleiformis
EW718371       --> ..................................................  Raphanus sativus var. oleiformis
EW718631       --> ..................................................  Raphanus sativus var. oleiformis
EV531425       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY896579       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW721554       --> ..................................................  Raphanus sativus var. oleiformis
FD975447       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD531261       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY437509       --> ..................................................  Raphanus sativus cv GSK3-1

               1001   -   1051
UN19710        --> GGAGGGAGAAGGAAATCCAGATCGTCGTCTTCGTCCATCTCGCCCCATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW713526       <-- ..................................................  Raphanus sativus var. oleiformis
EW713525       <-- ..................................................  Raphanus sativus var. oleiformis
FD979407       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY431039       <-- GGAGGGAGGAGGAAATCCAGATCGTCGTCTTCGTCCATCTCGCCCCATCG  Raphanus sativus cv GSK3-1
FY430378       <-- GGAGGGAGGAGGAAATCCAGATCGTCGTCTTCGTCCATCTCGCCCCATCG  Raphanus sativus cv GSK3-1
EY901217       <-- GGAGGGAGAAGGAAATCGAGATCGTCGTCTTCGTCCATCTCTCCCCATCG  Raphanus raphanistrum subsp. maritimus
FD535643       <-- GGAGGGAGAAGGAAATCGAGATCGTCGTCTTCGTCCATCTCTCCCCATCG  Raphanus raphanistrum subsp. maritimus
EW716308       <-- GGAGGGAGGAGGAAATCCAGATCGTCGTCTTCGTCCATCTCGCCCCATCG  Raphanus sativus var. oleiformis
EX748774       <-- GGAGGGAGAAGGAAATCGAGATCGTCGTCTTCGTCCATCTCTCCCCATCG  Raphanus raphanistrum subsp. maritimus
FD561385       <-- GGAGGGAGAAGGAAATCCAGATCGTCGTCTTCGTCCATCTCGCCCCATCG  Raphanus sativus var. oleiformis
EW718371       --> ..................................................  Raphanus sativus var. oleiformis
EW718631       --> ..................................................  Raphanus sativus var. oleiformis
EV531425       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY896579       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW721554       --> ..................................................  Raphanus sativus var. oleiformis
FD975447       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD531261       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY437509       --> ..................................................  Raphanus sativus cv GSK3-1

               1051   -   1101
UN19710        --> GAACTTGCTCGTTTTCTGCTGCGAATCGGTCGTCGTCATCTTTCTCGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW713526       <-- ..................................................  Raphanus sativus var. oleiformis
EW713525       <-- ..................................................  Raphanus sativus var. oleiformis
FD979407       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY431039       <-- GAACTTGCTCGTTTTCTGCTGCGAATCGGTCGTCGTCATCTTTCTCGTTT  Raphanus sativus cv GSK3-1
FY430378       <-- GAACTTGCTCGTTTTCTGCTGCGAATCGGTCGTCGTCATCTTTCTCGTTT  Raphanus sativus cv GSK3-1
EY901217       <-- GAACTTGCTCGTTTTCTGCTGAGAATCGGCCGTCGTCATCTTTCTCGTTT  Raphanus raphanistrum subsp. maritimus
FD535643       <-- AAACTTGCTCGTTTTCTGCTGAGAATCGGCCGTCGTCATCTTTCTCGTTT  Raphanus raphanistrum subsp. maritimus
EW716308       <-- GAACTTGCTCGTTTTCTGCTGCGAATCGGTCGTCGTCATCTTTCTCGTTT  Raphanus sativus var. oleiformis
EX748774       <-- GAACTTGCTCGTTTTCTGCTGAGAATCGGCCGTCGTCATCTTTCTAGTTT  Raphanus raphanistrum subsp. maritimus
FD561385       <-- GAACTTGCTCGTTTTCTGCTGCGAATCGGTCGTCGTCATCTTTCTCGTTT  Raphanus sativus var. oleiformis
EW718371       --> ..................................................  Raphanus sativus var. oleiformis
EW718631       --> ..................................................  Raphanus sativus var. oleiformis
EV531425       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY896579       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW721554       --> ..................................................  Raphanus sativus var. oleiformis
FD975447       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD531261       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY437509       --> ..................................................  Raphanus sativus cv GSK3-1

               1101   -   1151
UN19710        --> TTTGGATGGATTGTCAGATGCGCCGCTTCTTGT-GGTTCGATGATGAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- ..................................................
EW713526       <-- ..................................................
EW713525       <-- ..................................................
FD979407       <-- ..................................................
FY431039       <-- ..................................................
FY430378       <-- ..................................................
EY901217       <-- TTTGGATGGATTGTCAGATGCGCCGCTTCTTGT-GGTTCGATGATcc...
FD535643       <-- TTTGGATGGATTGTCAGATGCGCCGCTTCTTGT-GGTTCGATGATcc...
EW716308       <-- TTTGGATGGATTGTCAGATGCGCCGCTTCTTGT-GGTTCGATGATGAATG
EX748774       <-- TTTGGATGGATTGTCAGATGCGCCGCTTCTTGT-GGTTCGATGATGAATG
FD561385       <-- TTTGGATGGATTGTCAGATGCGCCGCTTATTGTTGGTTCGATGATGAATG
EW718371       --> ..................................................
EW718631       --> ..................................................
EV531425       --> ..................................................
EY896579       --> ..................................................
EW721554       --> ..................................................
FD975447       --> ..................................................
FD531261       --> ..................................................
FY437509       --> ..................................................

               1151   -   1201
UN19710        --> ATGCGCTTAGGGTTTGGGGATCTTATCTGGTGCTTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527104       <-- .......................................
EW713526       <-- .......................................
EW713525       <-- .......................................
FD979407       <-- .......................................
FY431039       <-- .......................................
FY430378       <-- .......................................
EY901217       <-- .......................................
FD535643       <-- .......................................
EW716308       <-- ATGCGCTTcc.............................
EX748774       <-- ATGCGCTTAGGGTTTGGGGATCTTATCTGGTGCTTCc..
FD561385       <-- ATGCGCTTAGGGTTTGGGGATCTTATCTGGTGCTTCTCC
EW718371       --> .......................................
EW718631       --> .......................................
EV531425       --> .......................................
EY896579       --> .......................................
EW721554       --> .......................................
FD975447       --> .......................................
FD531261       --> .......................................
FY437509       --> .......................................