RadishBase

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Alignment for radish unigene UN19715

               1      -     51
UN19715        --> GGGGTCAGAGCCTCAAAACATCGAGTGGCTAATAAACCATCACTGTATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- ..................................................
EX752045       <-- ..................................................
FD531318       <-- ..................................................
EW736915       <-- ..................................................
EX767760       <-- ..................................................
EW716055       --> GGGGTCAGAGCCTCAAAACATCGAGTGGCTAATAAACCATCACTGTATTA
EW716414       --> ..................................................
EX747981       --> ..................................................
EY904853       --> ..................................................
EX763708       --> ..................................................
EY899432       --> ..................................................
EY914197       --> ..................................................
FD535715       --> ..................................................
EX905835       --> ..................................................
EX905529       --> ..................................................
FD981651       --> ..................................................

               51     -    101
UN19715        --> CGAAATAAGTCCAAAACCATGAGAGGCCACAACTTCGTCGAAGCCCATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- ..................................................
EX752045       <-- ..................................................
FD531318       <-- ..................................................
EW736915       <-- ..................................................
EX767760       <-- ..................................................
EW716055       --> CGAAATAAGTCCAAAACCATGAGAGGCCACAACTTCGTCGAAGCCCATTA
EW716414       --> ..................................ggGTCGAAGCCCATTA
EX747981       --> ..................................ggGTCGAAGCCCATTA
EY904853       --> ..................................ggGTCCAAGCCCATTA
EX763708       --> .....................................ggGAAGCCCATTA
EY899432       --> .....................................ggGAAGCCCATTA
EY914197       --> .....................................ggGAAGCCCATTA
FD535715       --> ............................................ggATTA
EX905835       --> ...............................................ggA
EX905529       --> ..................................................
FD981651       --> ..................................................

               101    -    151
UN19715        --> TCATCGTCAATGGCTAAAGCCAGCACCACTCTGTTTGCTGTCACCTCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- ..................................................
EX752045       <-- ..................................................
FD531318       <-- ..................................................
EW736915       <-- ..................................................
EX767760       <-- ..................................................
EW716055       --> TCATCGTCAATGGCTAAAGCCAGCACCACTCTGTTTGCTGTCACCTCCTC
EW716414       --> TCATCGTCAATGGCTAAAGCCAGCACCACTCTGTTTGCTGTCACTTCCTT
EX747981       --> TCATCGTCAATGGCTAAAGCCAGCACCACTCTGTTTGCTGTCACCTCCTC
EY904853       --> TCATCGTCAATGGCTAAAGCCAGCACCACTCTGTTTGCTGTCACCTCCTC
EX763708       --> TCATCGTCAATGGCTAAAGCCAGCACCACTCTGTTTGCTGTCGCCTCCTC
EY899432       --> TCATCGTCAATGGCTAAAGCCAGCACCACTCTGCTTGCTGTCACCTCCTC
EY914197       --> TCATCGTCAATGGCTAAAGCCAGCACCACTCTGTTTGCTGTCACCTCCTC
FD535715       --> TCATCGTCAATGGCTAAAGCCAGCACCACTCTGTTTGCTGTCACCTCCTC
EX905835       --> TCATCGTCAATGGCTAAAGCCAGCACCACTCTGTTTGCTGTCACCTCCTC
EX905529       --> ..........................................ggCTCCTC
FD981651       --> ..................................................

               151    -    201
UN19715        --> TGTTTCGACTCGTTTCTCTCTTCTCCCTCCTTCTATATCTCTTAAACTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX752045       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD531318       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW736915       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX767760       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716055       --> TGTTTCGACTCGTTTCTCTCTTCTCCCTCCTTCTAAATCTCTTAAACTCT  Raphanus sativus var. oleiformis
EW716414       --> TGTTTCGACTCGTTTCTCTCTTCTCCCTCCTTCTAAATCTCTTAAACTCT  Raphanus sativus var. oleiformis
EX747981       --> TGTTTCGACTCGTTTCTCTCTTCTCCCTCCTTCTATATCTCTTAAACTCT  Raphanus raphanistrum subsp. maritimus
EY904853       --> TGTTTCGACTCGTTTCTCTCTTCTCCCTCCTTCTAAATCTCTTAAACTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763708       --> TGTTTCGACTCGTTTCTCTCTTCTCCCTCCTTCTATATCTCTTAAACTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899432       --> TGTTTCGACTCGTTTCTCTCTTCTCCCTCCTTCTATATCTCTTAAACTCT  Raphanus raphanistrum subsp. maritimus
EY914197       --> TGTTTCGACTCGTTTCTCTCTTCTCCCTCCTTCTATATCTCTTAAACTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535715       --> TGTTTCGACTCGTTTCTCTCTTCTCCCTCCTTCTATATCTCTTAAACTCT  Raphanus raphanistrum subsp. maritimus
EX905835       --> TGTTTCGACTCGTTTCTCTCTTCTCCCTCCTTCTAAATCTCTTAAACTCT  Raphanus sativus cv Rat-Tail Radish #3870
EX905529       --> TGTTTCGACTCGTTTCTCTCTTCTCCCTCCTTCTAAATCTCTTAAACTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD981651       --> ....................TTCTCCCTCCTTCTATATCTCTTAAACTCT  Raphanus raphanistrum subsp. raphanistrum (NY)

               201    -    251
UN19715        --> CAGCTCCAAGCGCGAGACTCGCCGTGCCAATGGCTGCTATGGCCACCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- ..................................................
EX752045       <-- ..................................................
FD531318       <-- ..................................................
EW736915       <-- ..................................................
EX767760       <-- ..................................................
EW716055       --> CAGCTCCAAGCGCGAGACTCGCCGTGCCAATGGCTGCTATGGCCACCACT
EW716414       --> CAGCTCCAAGTGCGGGACTCGCCGTGCCAATGGCTGCTATGGCCACCACT
EX747981       --> CAGCTCCAAGCGCGAGACTCGCCGTGCCAATGGCTGCTATGGCCACCACT
EY904853       --> CAGCTCCAAGCGCGAGACTCGCCGTGCCAATGGCTGCTATGGCCGCCACT
EX763708       --> CAGCTCCAAGCGCGAGACTCGCCGTGCCAATGGCTGCTATGGCCACCACT
EY899432       --> CAGCTCCAAGCGCGAGACTCGCCGTGCCAATGGCTGCTATGGCCACCACT
EY914197       --> CAGCTCCAAGCGCGAGACTCGCCGTGCCAATGGCTGCTATGGCCACCACT
FD535715       --> CAGCTCCAAGCGCGAGACTCGCCGTGCCAATGGCTGCTATGGCCACCACT
EX905835       --> CAGCTCCAAGCGCGAGACTCGCCGTGCCAATGGCTGCTATGGCCACCACT
EX905529       --> CAGCTCCAAGCGCGAGACTCGCCGTGCCAATGGCTGTTATGGCCACCACT
FD981651       --> CAGCTCCAAGCGCGAGACTCGCCGTGCCAATGGCTGCTATGGCCACCACT

               251    -    301
UN19715        --> GCTAAAAAGGTGGCTCCTGCTGTGATCGTGGGTGGCGGGAGAGTCGGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- ..................................................
EX752045       <-- ..................................................
FD531318       <-- ..................................................
EW736915       <-- ..................................................
EX767760       <-- ..................................................
EW716055       --> GCTAAAAAGGTGGCTCCTGCTGTGATCGTGGGTGGCGGGAGAGTCGGACA
EW716414       --> GCTAAAAAGGTGGCTCCTGCTGTGATCGTGGGTGGCGGGAGAGTCGGACA
EX747981       --> GCTAAAAAGGTGGCTCCTGCTGTGATCGTGGGTGGCGGGAGAGTCGGACA
EY904853       --> GCTAAAAAGGTGGCTCCTGCTGTGATCGTGGGTGGCGGGAGAGTCGGAAA
EX763708       --> GCTAAAAAGGTGGCTCCTGCTGTGATTGTGGGTGGCGGGAGAGTCGGACA
EY899432       --> GCTAAAAAGGTGGCTCCTGCTGTGATCGTGGGTGGCGGGAGAGTCGGACA
EY914197       --> GCTAAAAAGGTGGCTCCTGCTGTGATCGTGGGTGGCGGGAGAGTCGGACA
FD535715       --> GCTGAAAAGGTGGCTCCTGCTGTGATCGTGGGTGGCGGGAGAGTCGGACA
EX905835       --> GCTAAAAAGGTGGCTCCTGCTGTGATCGTGGGTGGCGGGAGAGTCGGACA
EX905529       --> GCTAAAAAGGTGGCTCCTGCTGTGATCGTGGGTGGCGGGAGAGTCGGACA
FD981651       --> GCTAAAAAGGTGGCTCCTGCTGTGATCGTGGGTGGCGGGAGAGTCGGACA

               301    -    351
UN19715        --> AGCGTTGCAGGAAATGGGTAGTGGCGATGATGTATTGGTGAAGAGAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- ..................................................
EX752045       <-- ..................................................
FD531318       <-- ..................................................
EW736915       <-- ..................................................
EX767760       <-- ..................................................
EW716055       --> AGCGTTGCAGGAAATGGGTAGTGGCGATGATGTATTGGTGAAGAGAGGAG
EW716414       --> AGCGTTGCAGGAAATGGGTAGTGGCGATGATGTATTGGTGAAGAGAGGAG
EX747981       --> AGCGTTGCAGGAAATGGGTAGTGGCGATGATGTATTGGTGAAGAGAGGAG
EY904853       --> AGCGTTGCAGGAAATGGGTAGTGGCAATGATGTATTGGTGAAGAGAGGAG
EX763708       --> AGCGTTGCAGGAAATGGGTAGTGGCGATGATGTATTGGTGAAGAGAGGAG
EY899432       --> AGCGTTGCAGGAAATGGGTAGTGGCGATGATGTATTGGTGAAGAGAGGAG
EY914197       --> AGCGTTGCAGGAAATGGGTAGTGGCGATGATGTATTGGTGAAGAGAGGAG
FD535715       --> AGCGTTGCAGGAAATGGGTAGTGGCGATGATGTATTGGTGAAGAGAGGAG
EX905835       --> AGCGTTGCAGGAAATGGGTAGTGGCGATGATGTATTGGTGAAGAGAGGAG
EX905529       --> AGCGTTGCAGGAAATGGGTAGTGGCGATGATGTATTGGTGAAGAGAGGAG
FD981651       --> AGCGTTGCAGGAAATGGGTAGTGGCGATGATGTATTGGTGAAGAGAGGAG

               351    -    401
UN19715        --> AACCCGTTCCGGTTGATTTCGAAGGACCAATATTGGTTTGTACTAGAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX752045       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD531318       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW736915       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX767760       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716055       --> AACCCGTTCCGGTTGATTTCGAAGGACCTATATTGGTTTGTACTAGAAAT  Raphanus sativus var. oleiformis
EW716414       --> AACCCGTTCCGGTTGATTTCGAAGGACCTATATTGGTTTGTACTAGAAAT  Raphanus sativus var. oleiformis
EX747981       --> AACCCGTTCCGGTTGATTTCGAAGGACCAATATTGGTTTGTACTAGAAAT  Raphanus raphanistrum subsp. maritimus
EY904853       --> AACCCGTTCCGGTTGATTTCGAAGGACCCATTTTGGTTTGTACTA-AAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763708       --> AACCCGTTCCGGTTGATTTCGAAGGACCAATATTGGTTTGTACTAGAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899432       --> AACCCGTTCCGGTTGATTTCGAAGGACCAATATTGGTTTGTACTAGAAAT  Raphanus raphanistrum subsp. maritimus
EY914197       --> AACCCGTTCCGGTTGATTTCGAAGGACCAATATTGGTTTGTACTAGAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535715       --> AACCCGTTCCGGTTGATTTCGAAGGACCAATATTGGTTTGTACTAGAAAT  Raphanus raphanistrum subsp. maritimus
EX905835       --> AACCCGTTCCGGTTGATTTCGAAGGACCTATATTGGTTTGTACTAGAAAT  Raphanus sativus cv Rat-Tail Radish #3870
EX905529       --> AACCCGTTCCGGTTGATTTCGAAGGACCTATATTGGTTTGTACTAGAAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD981651       --> AACCCGTTCCGGTTGATTTCGAAGGACCAATATTGGTTTGTACTAGAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)

               401    -    451
UN19715        --> GATGATCTCGATGCTGTTCTTGAAGCTACTCCTCAGTCTAGATGGAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- ....................TGAAGCTACTCCTCAGTCTAGATGGAAAGA
EX752045       <-- ..................................................
FD531318       <-- ..................................................
EW736915       <-- ..................................................
EX767760       <-- ..................................................
EW716055       --> GATGATCTCGATGCTGTTCTTGAAGCTACTCCTCAGTCTAGATGGAAAGA
EW716414       --> GATGATCTCGATGCTGTTCTTGAAGCTACTCCTCAGTCTAGATGGAAAGA
EX747981       --> GATGATCTCGATGCTGTTCTTGAAGCTACTCCTCAGTCTAGATGGAAAGA
EY904853       --> GATGATCTCGATGCTGTTCTTCAAGCTACTCCTCA-TCTAGATGGAAAGt
EX763708       --> GATGATCTCGATGCTGTTCTTGAAGCTACTCCTCAGTCTAGATGGAAAGA
EY899432       --> GATGATCTCGATGCTGTTCTTGAAGCTACTCCTCAGTCTAGATGGAAAGA
EY914197       --> GATGATCTCGATGCTGTTCTTGAAGCTACTCCTCAGTCTAGATGGAAAGA
FD535715       --> GATGATCTCGATGCTGTTCTTGAAGCTACTCCTCAGTCTAGATGGAAAGA
EX905835       --> GATGATCTCGATGCTGTTCTTGAAGCTACTCCTCAGTCTAGATGGAAAGA
EX905529       --> GATGATCTCGATGCTGTTCTTGAAGCTACTCCTCAGTCTAGATGGAAAGA
FD981651       --> GATGATCTCGATGCTGTTCTTGAAGCTACTCCTCAGTCTAGATGGAAAGA

               451    -    501
UN19715        --> TTTGGTGTTTTTCCAAAATGGAATGATGGAGCCGTGGTTCGAGAGCAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- TTTGGTGTTTTTCCAAAATGGAATGATGGAGCCGTGGTTCGAGAGCAAAG
EX752045       <-- ...........TCCAAAATGGAATGATGGAGCCGTGGTTCGAGAGCAAAG
FD531318       <-- .............CAAAATGGAATGATGGAGCCGTGGTTCGAGAGCAAAG
EW736915       <-- ..................................................
EX767760       <-- ..................................................
EW716055       --> TTTGGTGTTTTTCCAAAATGGAATGATGGAGCCGTGGTTCGAGAGCAAAG
EW716414       --> TTTGGTGTTTTTCCAAAATGGAATGATGGGGCCGTGGTTCGAGAGCAAAG
EX747981       --> TTTGGTGTTTTTCCAAAATGGAATGATGGAGCCGTGGTTCGAGAGCAAAG
EY904853       --> tt................................................
EX763708       --> TTTGGTGTTTTTCCAAAATGGAATGATGGAGCCGTGGTTCGAGAGCAAAG
EY899432       --> TTTGGTGTTTTTCCAAAATGGAATGATGGAGCCGTGGTTTGAGAGCAAAG
EY914197       --> TTTGGTGTTTTTCCAAAATGGAATGATGGAGCCGTGGTTCGAGAGCAAAG
FD535715       --> TTTGGTGTTTTTCCAAAATGGAATGATGGAGCCGTGGTTCGAGAGCAAAG
EX905835       --> TTTGGTGTTTTTCCAAAATGGAATGATGGAGCCGTGGTTCGAGAGCAAAG
EX905529       --> TTTGGTGTTTTTCCAAAATGGAATGATGGAGCCGTGGTTCGAGAGCAAAG
FD981651       --> TTTGGTGTTTTTCCAAAATGGAATGATGGAGCCGTGGTTCGAGAGCAAAG

               501    -    551
UN19715        --> GTTTGGGTGATGCAGACCAAGTGTTGGCCTATTTTGCCGTGTCAAAGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- GTTTGGGTGATGCAGACCAAGTGTTGGCCTATTTTGCCGTGTCAAAGCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX752045       <-- GTTTGGGTGATGCAGACCAAGTGTTGGCCTATTTTGCCGTGTCAAAGCTC  Raphanus raphanistrum subsp. maritimus
FD531318       <-- GTTTGGGTGATGCAGACCAAGTGTTGGCCTATTTTGCCGTGTCAAAGCTC  Raphanus raphanistrum subsp. maritimus
EW736915       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX767760       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716055       --> GTTTGGGTGATGCAGACCAAGTGTTGGCCTATTTTGCTGTGTCAAAGCTC  Raphanus sativus var. oleiformis
EW716414       --> GTTTGGGTGATGCAGACCAAGTGTTGGCCTATTTTGCTGTGTCAAAGCTC  Raphanus sativus var. oleiformis
EX747981       --> GTTTGGGTGATGCAGACCAAGTGTTGGCCTATTTTGCCGTGTCAAAGCTC  Raphanus raphanistrum subsp. maritimus
EY904853       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763708       --> GTTTGGGTGATGCAGACCAAGTGTTGGCCTATTTTGCCGTGTCAAAGCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899432       --> GTTTGGGTGATGCAGACCAAGTGTTGGCCTATTTTGCCGTGTCAAAGCTC  Raphanus raphanistrum subsp. maritimus
EY914197       --> GTTTGGGTGATGCAGACCAAGTGTTGGCCTATTTTGCCGTGTCAAAGCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535715       --> GTTTGGGTGATGCAGACCAAGTGTTGGCCTATTTTGCCGTGTCAAAGCTC  Raphanus raphanistrum subsp. maritimus
EX905835       --> GTTTGGGTGATGCAGACCAAGTGTTGGCCTATTTTGCTGTGTCAAAGCTC  Raphanus sativus cv Rat-Tail Radish #3870
EX905529       --> GTTTGGGTGATGCAGACCAAGTGTTGGCCTATTTTGCTGTGTCAAAGCTC  Raphanus sativus cv Rat-Tail Radish #3870
FD981651       --> GTTTGGGTGATGCAGACCAAGTGTTGGCCTATTTTGCCGTGTCAAAGCTC  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN19715        --> GGTGAGCCTCCTGTGGATGGGATAACTGACACTAACCCAGAAGGTTTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- GGTGAGCCTCCTGTGGATGGGATAACTGACACTAACCCAGAAGGTTTAAC
EX752045       <-- GGTGAGCCTCCTGTGGATGGGATAACTGACACTAACCCAGAAGGTTTAAC
FD531318       <-- GGTGAGCCTCCTGTGGATGGGATAACTGACACTAACCCAGAAGGTTTAAC
EW736915       <-- ............GTGGATGGGATAACTGACACTAACCCAGAAGGTTTAAC
EX767760       <-- .............TGGATGGGATAACTGACACTAACCCAGAAGGTTTAAC
EW716055       --> GGTGAGCCTCCTGTGGATGGGATAACTGACACTAACCCAGAAGGTTTAAC
EW716414       --> GGTGAGCCTCCTGTGGATGGGATAACTGACACTAACCCAGAAGGTTTAAC
EX747981       --> GGTGAGCCTCCTGTGGATGGGATAACTGACACTAACCCAGAAGGTTTAAC
EY904853       --> ..................................................
EX763708       --> GGTGAGCCTCCTGTGGATGGGATAACTGACACTAACCCAGAAGGTTTAAC
EY899432       --> GGTGAGCCTCCTGTGGATGGGATAACTGACACTAACCCAGAAGGTTTAAC
EY914197       --> GGTGAGCCTCCTGTGGATGGGATAACTGACACTAACCCAGAAGGTTTAAC
FD535715       --> GGTGAGCCTCCTGTGGATGGGATAACTGACACTAACCCAGAAGGTTTAAC
EX905835       --> GGTGAGCCTCCTGTGGATGGGATAACTGACACTAACCCAGAAGGTTTAAC
EX905529       --> GGTGAGCCTCCTGTGGATGGGATAACTGACACTAACCCAGAAGGTTTAAC
FD981651       --> GGTGAGCCTCCTGTGGATGGGATAACTGACACTAACCCAGAAGGTTTAAC

               601    -    651
UN19715        --> TGCTGCTTATGGCAAATGGGCTTCGGATGTAGCTGCAAGACTGCAATCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- TGCTGCTTATGGCAAATGGGCTTCGGATGTAGCTGCAAGACTGCAATCTG
EX752045       <-- TGCTGCTTATGGCAAATGGGCTTCGGATGTAGCTGCAAGACTGCAATCTG
FD531318       <-- TGCTGCTTATGGCAAATGGGCTTCGGATGTAGCTGCAAGACTGCAATCTG
EW736915       <-- TGCTGCTTATGGCAAATGGGCTTCGGATGTAGCTGCAAGACTGCAATCTG
EX767760       <-- TGCTGCTTATGGCAAATGGGCTTCGGATGTAGCTGCAAGACTGCAATCTG
EW716055       --> TGCTGCTTATGGCAAATGGGCTTCGGATGTAGCTGCAAGACTGCAATCTG
EW716414       --> TGCTGCTTATGGCAAATGGGCTTCGGATGTAGCTGCAAGACTGCAATCTG
EX747981       --> TGCTGCTTATGGCAAATGGGCTTCGGATGTAGCTGCAAGACTGCAATCTG
EY904853       --> ..................................................
EX763708       --> TGCTGCTTATGGCAAATGGGCTTCGGATGTAGCTGCAAGACTGCAATCTG
EY899432       --> TGCTGCTTATGGCAAATGGGCTTCGGATGTAGCTGCAAGACTGCAATCTG
EY914197       --> TGCTGCTTATGGCAAATGGGCTTCGGATGTAGCTGCAAGACTGCAATCTG
FD535715       --> TGCTGCTTATGGCAAATGGGCTTCGGATGTAGCTGCAAGACTGCAATCTG
EX905835       --> TGCTGCTTATGGCAAATGGGCTTCGGATGTAGCTGCAAGACTGCAATCTG
EX905529       --> TGCTGCTTATGGCAAATGGGCTTCGGATGTAGCTGCAAGACTGCAATCTG
FD981651       --> TGCTGCTTATGGCAAATGGGCTTCGGATGTAGCTGCAAGACTGCAATCTG

               651    -    701
UN19715        --> GTGGCCTCTCTTGCAAGGTACTTGACAAAGAAGCTTTTGAGAAGCAAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- GTGGCCTCTCTTGCAAGGTACTTGACAAAGAAGCTTTTGAGAAGCAAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX752045       <-- GTGGCCTCTCTTGCAAGGTACTTGACAAAGAAGCTTTTGAGAAGCAAATG  Raphanus raphanistrum subsp. maritimus
FD531318       <-- GTGGCCTCTCTTGCAAGGTACTTGACAAAGAAGCTTTTGAGAAGCAAATG  Raphanus raphanistrum subsp. maritimus
EW736915       <-- GTGGCCTCTCTTGCAAGGTGCTTGACAAAGAAGCTTTTCAGAAGCAAATG  Raphanus sativus cv Rat-Tail Radish #3870
EX767760       <-- GTGGCCTCTCTTGCAAGGTACTTGACAAAGAAGCTTTTGAGAAGCAAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716055       --> GTGGCCTCTCTTGCAAGGTACTTGACAAAGAATCTTTTCAGAAGCAAATG  Raphanus sativus var. oleiformis
EW716414       --> GTGGCCTCTCTTGCAAGGTACTTGACAAAGAATCTTTTCAGAAGCAAATG  Raphanus sativus var. oleiformis
EX747981       --> GTGGCCTCTCTTGCAAGGTACTTGACAAAGAAGCTTTTGAGAAGCAAATG  Raphanus raphanistrum subsp. maritimus
EY904853       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763708       --> GTGGCCTCTCTTGCAAGGTACTTGACAAAGAAGCTTTTGAGAAGCAAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899432       --> GTGGCCTCTCTTGCAAGGTACTTGACAA......................  Raphanus raphanistrum subsp. maritimus
EY914197       --> GTGGCCTCTCTTGCAAGGTACTTGACAAAGAAGCTTTTGAGAAGCAAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535715       --> GTGGCCTCTCTTGCAAGGTACTTGACAAAGAAGCTTTTGAGAAGCAAATG  Raphanus raphanistrum subsp. maritimus
EX905835       --> GTGGCCTCTCTTGCAAGGTACTTGACAAAGAATCTTTTCAGAAGCAAATG  Raphanus sativus cv Rat-Tail Radish #3870
EX905529       --> GTGGCCTCTCTTGCAAGGTACTTGACAAAGAATCTTTTCAGAAGCAAATG  Raphanus sativus cv Rat-Tail Radish #3870
FD981651       --> GTGGCCTCTCTTGCAAGGTACTTGACAAAGAAGCTTTTGAGAAGCAAATG  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN19715        --> CTGGAGAAACTCATATGGATTTGTGCGTTTATGCTTGTTGGAGCTCGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- CTGGAGAAACTCATATGGATTTGTGCGTTTATGCTTGTTGGAGCTCGTCA
EX752045       <-- CTGGAGAAACTCATATGGATTTGTGCGTTTATGCTTGTTGGAGCTCGTCA
FD531318       <-- CTGGAGAAACTCATATGGATTTGTGCGTTTATGCTTGTTGGAGCTCGTCA
EW736915       <-- CTGGAGAAACTCATTTGGATCTGTGCCTTTATGCTTGTTGGAGCTCGTCA
EX767760       <-- CTGGAGAAACTCATATGGATTTGTGCGTTTATGCTTGTTGGAGCTCGTCA
EW716055       --> CTGGAGAAACTCATATGGATTTGTGCGTTTATGCTTGTTGGAGCTCGTCA
EW716414       --> CTGGAGAAACTCATATGGATTTGTGCGTTTATGCTTGTTAGAGCTCATCA
EX747981       --> CTGGAGAAACTCATATGGATTTGTGCGTTTATGCTTGTTGGAGCTCGTCA
EY904853       --> ..................................................
EX763708       --> CTGGAGAAACTCATATGGATTTGTGCGTTTATGCTTGTTGGAGCTCGTCA
EY899432       --> ..................................................
EY914197       --> CTGGAGAAACTCATATGGATTTGTGCGTTTATGCTTGTTGGAGCTCGTCA
FD535715       --> CTGGAGAAACTCATATGGATTTGTGCGTTTATGCTTGTTGGAGCTCGTCA
EX905835       --> CTGGAGAAACTCATATGGATTTGTGCGTTTATGCTTGTTGGAGCTCGTCA
EX905529       --> CTGGAGAAACTCATATGGATTTGTGCGTTTATGCTTGTTGGAGCTCGTCA
FD981651       --> CTGGAGAAACTCATATGGATTTGTGCGTTTATGCTTGTTGGAGCTCGTCA

               751    -    801
UN19715        --> TCCAGGTGCTAGTGTTGGCATGGTGGAGAAAGAATACAGAGATGAAGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- TCCAGGTGCTAGTGTTGGCATGGTGGAGAAAGAATACAGAGATGAAGTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX752045       <-- TCCAGGTGCTAGTGTTGGCATGGTGGAGAAAGAATACAGAGATGAAGTGG  Raphanus raphanistrum subsp. maritimus
FD531318       <-- TCCAGGTGCTAGTGTTGGCATGGTGGAGAAAGAATACAGAGATGAAGTGG  Raphanus raphanistrum subsp. maritimus
EW736915       <-- TCCAGGTGCTAGTGTGGGCATGGTGGAGAAAGAATACAGAGACGAAGTGG  Raphanus sativus cv Rat-Tail Radish #3870
EX767760       <-- TCCAGGTGCTAGTGTTGGCATGGTGGAGAAAGAATACAGAGATGAAGTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716055       --> TCCAGGGGCTAGTGTGGGCATGGTGGAGAAAGAATACAGAGATGAAGTGG  Raphanus sativus var. oleiformis
EW716414       --> TCCAGGGGCTAGTGTGGGCATGGTGGAGAAAGA-TACAGAGATGAAGTGG  Raphanus sativus var. oleiformis
EX747981       --> TCCAGGTGCTAGTGTTGGCATGGTGGAGAAAGA-TACAGAGATGAAGTGG  Raphanus raphanistrum subsp. maritimus
EY904853       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763708       --> TCCAGGTGCTAGTGTTGGCATGGTGGAGAAAGAATACAGAGATGAAGTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899432       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY914197       --> TCCAGGTGCTAGTGTTGGCATGGTGGAGAAAGA-TACAGAGATGAAGTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535715       --> TCCAG-TGCTAGTGTTGGCATGGTGGAGAAAGAATACAGAGATGAAGTGG  Raphanus raphanistrum subsp. maritimus
EX905835       --> TCCAGGGGCTAGTGTGGGCATGGTGGAGAAAGA-TACAGAGATGAAGTGG  Raphanus sativus cv Rat-Tail Radish #3870
EX905529       --> TCCAGGGGCTAGTGTGGGCATGGTGGAGAAAGAATACAGAGATGAAGTGG  Raphanus sativus cv Rat-Tail Radish #3870
FD981651       --> TCCACGTGCTAGTGTTGGCATGGTGGAGAAAGA-TACAGAGATGAAGTGG  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN19715        --> CGAGACTCATCCAAGAACTCGCAGCAGCTGCTGCTGCAGAAAAAGGACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- CGAGACTCATCCAAGAACTCGCAGCAGCTGCTGCTGCAGAAAAAGGACTA
EX752045       <-- CGAGACTCATCCAAGAACTCGCAGCAGCTGCTGCTGCAGAAAAAGGACTA
FD531318       <-- CGAGACTCATCCAAGAACTCGCAGCAGCTGCTGCTGCAGAAAAAGGACTA
EW736915       <-- CGAGACTCATCCAAGAACTTGCAGCAGCTGCTGCTGCAGAAAAAGGACTA
EX767760       <-- CGAGACTCATCCAAGAACTCGCAGCAGCTGCTGCTGCAGAAAAAGGACTA
EW716055       --> CGAGACTCATCCAAGAACTCGCAGCAGCTGCTGCTGCAG...........
EW716414       --> CGAGACTCATCCAAGA-CTCGCAGCAGCTGCTGCTGCA-AAAAAG-ACTA
EX747981       --> CGAGACTCATCCAAGAACTCGCAGCAGCTGCTGCTGCAGAAAA.......
EY904853       --> ..................................................
EX763708       --> CGAGACTCATC.......................................
EY899432       --> ..................................................
EY914197       --> CGAGACTCATCCAAGA-CTCGCAGCAGCTGCTGCT...............
FD535715       --> CGAGACTCATC.......................................
EX905835       --> CGAGACTCATCCAAGA-CTCGCAGCAGCTGCTG.................
EX905529       --> CGAGACTCATCCAAGAACTCGCAGCAGCTGCTGCTGCAGAAAA-GGACTA
FD981651       --> CGAGACTCAT........................................

               851    -    901
UN19715        --> ACCTTTGAAGACAACATGGTGGAGAGACTGTGTGCTTATTCCCGCGCCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- ACCTTTGAAGACAACATGGTGGAGAGACTGTGTGCTTATTCCCGCGCCGT
EX752045       <-- ACCTTTGAAGACAACATGGTGGAGAGACTGTGTGCTTATTCCCGCGCCGT
FD531318       <-- ACCTTTGAAGACAACATGGTGGAGAGACTGTGTGCTTATTCCCGCGCCGT
EW736915       <-- ACCTTTGAAGACAACATCGTGGAGAGACTGTGTGCTTATTCCCGCGCCGT
EX767760       <-- ACCTTTGAAGACAACATGGTGGAGAGACTGTGTGCTTATTCCCGCGCCGT
EW716055       --> ..................................................
EW716414       --> ACCTTTGA-GACA-CATGGTGGAGAGACTGTGTGC...............
EX747981       --> ..................................................
EY904853       --> ..................................................
EX763708       --> ..................................................
EY899432       --> ..................................................
EY914197       --> ..................................................
FD535715       --> ..................................................
EX905835       --> ..................................................
EX905529       --> ACCTTTGA-GACA-CATGGTGGAGAGACTGTGTGCT-ATTCA-GAGCCGT
FD981651       --> ..................................................

               901    -    951
UN19715        --> TGCTCATTTCCCAACCGCTGTTAAAGAATTTAAATGGAGGAATGGTTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- TGCTCATTTCCCAACCGCTGTTAAAGAATTTAAATGGAGGAATGGTTGGT
EX752045       <-- TGCTCATTTCCCAACCGCTGTTAAAGAATTTAAATGGAGGAATGGTTGGT
FD531318       <-- TGCTCATTTCCCAACCGCTGTTAAAGAATTTAAATGGAGGAATGGTTGGT
EW736915       <-- TGCTCATTTCCCAACCGCTGTTAAAGAATTTAAATGGAGGAATGGTTGGT
EX767760       <-- TGCTCATTTCCCAACCGCTGTTAAAGAATTTAAATGGAGGAATGGTTGGT
EW716055       --> ..................................................
EW716414       --> ..................................................
EX747981       --> ..................................................
EY904853       --> ..................................................
EX763708       --> ..................................................
EY899432       --> ..................................................
EY914197       --> ..................................................
FD535715       --> ..................................................
EX905835       --> ..................................................
EX905529       --> TGCTCATTTCCCA--CGCTGT--AAGA-TTTAA-TGGAGGA-TGGTTGG.
FD981651       --> ..................................................

               951    -   1001
UN19715        --> TTTATTCGCTCTCAGAGAAGGCGATTGCAGAAGGGAAACCTGATCCTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- TTTATTCGCTCTCAGAGAAGGCGATTGCAGAAGGGAAACCTGATCCTTGT
EX752045       <-- TTTATTCGCTCTCAGAGAAGGCGATTGCAGAAGGGAAACCTGATCCTTGT
FD531318       <-- TTTATTCGCTCTCAGAGAAGGCGATTGCAGAAGGGAAACCTGATCCTTGT
EW736915       <-- TTTATTCGCTTTCAGAGAAGGCGATTGCAGAAGGGAAACCTGATCCTTGT
EX767760       <-- TTTATTCGCTCTCAGAGAAGGCGATTGCAGAAGGGAAACCTGATCCTTGT
EW716055       --> ..................................................
EW716414       --> ..................................................
EX747981       --> ..................................................
EY904853       --> ..................................................
EX763708       --> ..................................................
EY899432       --> ..................................................
EY914197       --> ..................................................
FD535715       --> ..................................................
EX905835       --> ..................................................
EX905529       --> ..................................................
FD981651       --> ..................................................

               1001   -   1051
UN19715        --> CCACTCCACACCGAATGGCTGAGAGAGCTAAAAGTGATATAGAGCCTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- CCACTCCACACCGAATGGCTGAGAGAGCTAAAAGTGATATAGAGCCTTGA
EX752045       <-- CCACTCCACACCGAATGGCTGAGAGAGCTAAAAGTGATATAGAGCCTTGA
FD531318       <-- CCACTCCACACCGAATGGCTGAGAGAGCTAAAAGTGATATAGAGCCTTGA
EW736915       <-- CCACTCCACACCGAATGGCTGAGAGAGCTAAAAGTGATATAGAGCCTTGA
EX767760       <-- CCACTCCACACCGAATGGCTGAGAGAGCTAAAAGTGATATAGAGCCTTGA
EW716055       --> ..................................................
EW716414       --> ..................................................
EX747981       --> ..................................................
EY904853       --> ..................................................
EX763708       --> ..................................................
EY899432       --> ..................................................
EY914197       --> ..................................................
FD535715       --> ..................................................
EX905835       --> ..................................................
EX905529       --> ..................................................
FD981651       --> ..................................................

               1051   -   1101
UN19715        --> CGGTACGTGACACCCTTTAGTAGATTTGTACACGTGTATGAGAAGCCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- CGGTACGTGACACCCTTTAGTAGATTTGTACACGTGTATGAGAAGCCAAG
EX752045       <-- CGGTACGTGACACCCTTTAGTAGATTTGTACACGTGTATGAGAAGCCAAG
FD531318       <-- CGGTACGTGACACCCTTTAGTAGATTTGTACACGTGTATGAGAAGCCAAG
EW736915       <-- CGGTACGTGACACCCTTTAGTAGATTTGTACACGTGTATGAGAAGCCAAG
EX767760       <-- CGGTACGTGACACCCTTTAGTAGATTTGTACACGTGTATGAGAAGCCAAG
EW716055       --> ..................................................
EW716414       --> ..................................................
EX747981       --> ..................................................
EY904853       --> ..................................................
EX763708       --> ..................................................
EY899432       --> ..................................................
EY914197       --> ..................................................
FD535715       --> ..................................................
EX905835       --> ..................................................
EX905529       --> ..................................................
FD981651       --> ..................................................

               1101   -   1151
UN19715        --> TAACGGTAAAACGTTTGATATTCTGTAAAAGAAAAAGTCCCGACTTTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- TAACGGTAAAACGCTTGATATTCTGTAAAAGAAAAAGTCCCGACTTTTAT
EX752045       <-- TAACGGTAAAACGTTTGATATTCTGTAAAAGAAAAAGTCCCGACTTTTAT
FD531318       <-- TAACGGTAAAACGTTTGATATTCTGTAAAAGAAAAAGTCCCGACTTTTAT
EW736915       <-- TAACGGTAAAACGTTTGATATTCTGTAAAAGAAAAAGTCCCGACTTTTAT
EX767760       <-- TAACGGTAAAACGTTTGATATTCTGTAAAAGAAAAAGTCCCGACTTTTAT
EW716055       --> ..................................................
EW716414       --> ..................................................
EX747981       --> ..................................................
EY904853       --> ..................................................
EX763708       --> ..................................................
EY899432       --> ..................................................
EY914197       --> ..................................................
FD535715       --> ..................................................
EX905835       --> ..................................................
EX905529       --> ..................................................
FD981651       --> ..................................................

               1151   -   1201
UN19715        --> TTGTGAAAAGTCTGTGTATTCAACGATCAAACATCTGGTTCTTGTCCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- TTGg..............................................
EX752045       <-- TTGTGAAAAGTCTGTGTATTCAACGATCAAACATCTGGTTCTTGTCCCAT
FD531318       <-- TTGag.............................................
EW736915       <-- TTGTGAAAAGTCTGTGTATTCAACGATCAAACATCTGGTTCTTGTCCCAT
EX767760       <-- TTGTGAAAAGTCTGTGTATTCAACGATCAAACATCTGGTTCTTGTCCCAT
EW716055       --> ..................................................
EW716414       --> ..................................................
EX747981       --> ..................................................
EY904853       --> ..................................................
EX763708       --> ..................................................
EY899432       --> ..................................................
EY914197       --> ..................................................
FD535715       --> ..................................................
EX905835       --> ..................................................
EX905529       --> ..................................................
FD981651       --> ..................................................

               1201   -   1251
UN19715        --> CCGTTAGAAAATCTGAAGTTTTTTTTTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD977369       <-- ...............................
EX752045       <-- CCGTTAGAAAATCTGAAGTTTTTTTTctc..
FD531318       <-- ...............................
EW736915       <-- CCGTTAGAAAATCTGAAGTTTTTTTTTCTCC
EX767760       <-- CCGTTAG........................
EW716055       --> ...............................
EW716414       --> ...............................
EX747981       --> ...............................
EY904853       --> ...............................
EX763708       --> ...............................
EY899432       --> ...............................
EY914197       --> ...............................
FD535715       --> ...............................
EX905835       --> ...............................
EX905529       --> ...............................
FD981651       --> ...............................