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Alignment for radish unigene UN19722

               -4     -     46
UN19722        --> .....GGATCCCATTATCATATCATCCTTCAAAACACAAAGCTAGAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- ..........ggATTATCATATCATCCTTCAAAACACAAAGCTAGAGAGA
EX768317       <-- ..................................................
FD936707       <-- ..................................................
EX750891       <-- ..................................................
FD967868       <-- ..................................................
FD975909       <-- ..................................................
FD983516       <-- ..................................................
EV542621       <-- ..................................................
FD961753       <-- ..................................................
FD968338       <-- ..................................................
EV552020       --> .....GGATCCCATTATCATATCATCCTTCAAAACACAAAGCTAGAGAGA
EW734872       --> .....GGATCCCATTATCATATCATCCTTCAAAACACAAAGCTAGAGAGA
EX746497       --> .....GGATCCCATTATCATATCATCCTTCAAAACACAAAGCTAGAGAGA
EX748310       --> .....GGATCCCATTATCATATCATCCTTCAAAACACAAAGCTAGAGAGA
EX764386       --> .....GGATCCCATTATCATATCATCCTTCAAAACACAAAGCTAGAGAGA
EX890515       --> .....GGATCCCATTATCATATCATCCTTCAAAACACAAAGCTAGAGAGA
FD987461       --> .....GGATCCCATTATCATATCATCCTTCAAAACACAAAGCTAGAGAGA
EV538664       --> gggtttcATCCCATTATCATATCATCCTTCAAAACACAAAGCTAGAGAGA
FD972446       --> gggtttcATCCCATTATCATATCATCCTTCAAAACACAAAGCTAGAGAGA
EX763717       --> .......ggCCCATTATCATATCATCCTTCAAAACACAAAGCTAGAGAGA
EY908464       --> ..........ggATTATCATATCATCCTTCAAAACACAAAGCTAGAGAGA
FD549576       --> ..........ggATTATCATATCATCCTTCAAAACACAAAGCTAGAGAGA
FY428285       --> ..................................................
FY438809       --> ..................................................
FY448460       --> ...............................................cgg
FY452893       --> ..................................................
EV568358       --> ..................................................
FD979940       --> ..................................................
FD940952       --> ..................................................
EX904399       --> ..................................................
EX756209       --> ..................................................

               46     -     96
UN19722        --> AAGAAAATGTGTTCCTCAAAATCAAAGAACATGAACCAAGAAGCCATTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- AAGAAAATGTGTTCCTCAAAATCAAAGAACATGAACCAAGAAGCCATTTC
EX768317       <-- ..................................................
FD936707       <-- ..................................................
EX750891       <-- ..................................................
FD967868       <-- ..................................................
FD975909       <-- ..................................................
FD983516       <-- ..................................................
EV542621       <-- ..................................................
FD961753       <-- ..................................................
FD968338       <-- ..................................................
EV552020       --> AAGAAAATGTGTTCCTCAAAATCAAAGAACATGAACCAAGAAGCCATTTC
EW734872       --> AAGAAAATGTGTTCCTCAAAATCAAAGAACATGAACCAAGAAGCCATTTC
EX746497       --> AAGAAAATGTGTTCCTCAAAATCAAAGAACATGAACCAAGAAGCCATTTC
EX748310       --> AAGAAAATGTGTTCCTCAAAATCAAAGAACATGAACCAAGAAGCCATTTC
EX764386       --> AAGAAAATGTGTTCCTCAAAATCAAAGAACATGAACCAAGAAGCCATTTC
EX890515       --> AAGAAAATGTGTTCCTCAAAATCAAAGAACATGAACCAAGAAGCCATTTC
FD987461       --> AAGAAAATGTGTTCCTCAAAATCAAAGAACATGAACCAAGAAGCCATTTC
EV538664       --> AAGAAAATGTGTTCCTCAAAATCAAAGAACATGAACCAGGAAGCCATTTC
FD972446       --> AAGAAAATGTGTTCCTCAAAATCAAAGAACATGAACCAAGAAGCCATTTC
EX763717       --> AAGAAAATGTGTTCCTCAAAATCAAAGGACATGAACCAAGAAGCCATTTC
EY908464       --> AAGAAAATGTGTTCCTCAAAATCAAAGAACATGAACCAAGAAGCCATTTC
FD549576       --> AAGAAAATGTGTTCCTCAAAATCAAAGAACATGAACCAAGAAGCCATTTC
FY428285       --> ...gAAATGTGTTCCTCAAAATCAAAGAACATGAACCAAGAAGCCATTTC
FY438809       --> ...gAAATGTGTTCCTCAAAATCAAAGAACATGAACCAAGAAGCCATTTC
FY448460       --> cacaaggTGTGTTCCTCAAAATCAAAGAACATGAACCAAGAAGCCATTTC
FY452893       --> ......................CAAAGAACATGAACCAAGAAGCCATTTC
EV568358       --> ..................................................
FD979940       --> ..................................................
FD940952       --> ..................................................
EX904399       --> ..................................................
EX756209       --> ..................................................

               96     -    146
UN19722        --> CCAAATCAATGGTCGTCCGGTTCTTCAGCCAAAATCGAACCAAGTTCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- CCAAATCAATGGTCGTCCGGTTCTTCAACCAAAATCGAACCAAGTTCCCA
EX768317       <-- ..................................................
FD936707       <-- ..................................................
EX750891       <-- ..................................................
FD967868       <-- ..................................................
FD975909       <-- ..................................................
FD983516       <-- ..................................................
EV542621       <-- ..................................................
FD961753       <-- ..................................................
FD968338       <-- ..................................................
EV552020       --> CCAAATCAATGGTCGTCCGGTTCTTCAGCCAAAATCGAACCAAGTTCCCA
EW734872       --> CCAAATCAATGGTCGTCCGGTTCTTCAGCCAAAATCGAACCAAGTTCCCA
EX746497       --> CCAAATCAATGGTCGTCCGGTTCTTCAGCCAAAATCGAACCAAGTTCCCA
EX748310       --> CCAAATCAATGGTCGTCCGGTTCTTCAGCCAAAATCGAACCAAGTTCCCA
EX764386       --> CCAAATCAATGGTCGTCCGGTTCTTCAGCCAAAATCGAACCAAGTTCCCA
EX890515       --> CCAAATCAATGGTCGTCCGGTTCTTCAGCCAAAATCGAACCAAGTTCCCA
FD987461       --> CCAAATCAATGGTCGTCCGGTTCTTCAGCCAAAATCGAACCAAGTTCCCA
EV538664       --> CCAAATCAATGGTCGTCCGGTTCTTCAGCCAAAATCGAACCAAGTTCCCA
FD972446       --> CCAAATCAATGGTCGTCCGGTTCTTCAGCCAAAATCGAACCAAGTTCCCA
EX763717       --> CCAAATCAATGGTCGTCCGGTTCTTCAGCCAAAATCGAACCAAGTTCCCA
EY908464       --> CCAAATCAATGGTCGTCCGGTTCTTCAACCAAAATCGAACCAAGTTCCCA
FD549576       --> CCAAATCAATGGTCGTCCGGTTCTTCAGCCAAAATCGAACCAAGTTCCCA
FY428285       --> CCAAATCAATGGTCGTCCGGTTCTTCAGCCAAAATCGAACCAAGTTCCCA
FY438809       --> CCAAATCAATGGTCGTCCGGTTCTTCAGCCAAAATCGAACCAAGTTCCCA
FY448460       --> CCAAATCAATGGTCGTCCGGTTCTTCAGCCAAAATCGAACCAAGTTCCCA
FY452893       --> CCAAATCAATGGTCGTCCGGTTCTTCAGCCAAAATCGAACCAAGTTCCCA
EV568358       --> ..................................................
FD979940       --> ..................................................
FD940952       --> ..................................................
EX904399       --> ..................................................
EX756209       --> ..................................................

               146    -    196
UN19722        --> CTTTAGACCGACGCAATTCACTCAAGAAATCCCCTCCTAAACCTTTGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- CTTTAGACCGACGCAATTCACTCAAGAAATCCCCTCCTAAACCTTTGATA
EX768317       <-- ..................................................
FD936707       <-- ..................................................
EX750891       <-- ..................................................
FD967868       <-- ..................................................
FD975909       <-- ..................................................
FD983516       <-- ..................................................
EV542621       <-- ..................................................
FD961753       <-- ..................................................
FD968338       <-- ..................................................
EV552020       --> CTTTAGACCGACGCAATTCACTCAAGAAATCCCCTCCTAAACCTTTGATA
EW734872       --> CTTTAGACCGACGCAATTCACTCAAGAAATCCCCTCCTAAACCTTTGATA
EX746497       --> CTTTAGACCGACGCAATTCACTCAAGAAATCCCCTCCTAAACCTTTGATA
EX748310       --> CTTTAGACCGACGCAATTCACTCAAGAAATCCCCTCCTAAACCTTTGATA
EX764386       --> CTTTAGACCGACGCAATTCACTCAAGAAATCCCCTCCTAAACCTTTGATA
EX890515       --> CTTTAGACCGACGCAATTCACTCAAGAAATCCCCTCCTAAACCTTTGATA
FD987461       --> CTTTAGACCGACGCAATTCACTCAAGAAATCCCCTCCTAAACCTTTGATA
EV538664       --> CTTTAGACCGACGCAATTCACTCAAGAAATCCCCTCCTAAACCTTTGATA
FD972446       --> CTTTAGACCGACGCAATTCACTCAAGAAATCCCCTCCTAAACCTTTGATA
EX763717       --> CTTTAGACCGACGCAATTCACTCAAGAAATCCCCTCCTAAACCTTTGATA
EY908464       --> CTTTAGACCGACGCAATTCACTCAAGAAATCCCCTCCTAAACCTTTGATA
FD549576       --> CTTTAGACCGACGCAATTCACTCAAGAAATCCCCTCCTAAACCGTTGATA
FY428285       --> CTTTAGACCGACGCAATTCACTCAAGAAATCCCCTCCTAAACCTTTGATA
FY438809       --> CTTTAGACCGACGCAATTCACTCAAGAAATCCCCTCCTAAACCTTTGATA
FY448460       --> CTTTAGACCGACGCAATTCACTCAAGAAATCCCCTCCTAAACCTTTGATA
FY452893       --> CTTTAGACCGACGCAATTCACTCAAGAAATCCCCTCCTAAACCTTTGATA
EV568358       --> ..................................................
FD979940       --> ..................................................
FD940952       --> ..................................................
EX904399       --> ..................................................
EX756209       --> ..................................................

               196    -    246
UN19722        --> CATCCCATTGCATCAAAGTTAGCGTCACCAAGACAAATATCCCTAAACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- CATCCCATTGCATCAAAGTTAGCGTCACCAAGACAAATATCCCTAAACTC
EX768317       <-- ..................................................
FD936707       <-- ..................................................
EX750891       <-- ..................................................
FD967868       <-- ..................................................
FD975909       <-- ..................................................
FD983516       <-- ..................................................
EV542621       <-- ..................................................
FD961753       <-- ..................................................
FD968338       <-- ..................................................
EV552020       --> CATCCCATTGCATCAAAGTTAGCGTCACCAAGACAAATATCCCTAAACTC
EW734872       --> CATCCCATTGCATCAAAGTTAGCGTCACCAAGACAAATATCCCTAAACTC
EX746497       --> CATCCCATTGCATCAAAGTTCGCGTCACCAAGACAAATATCCCTAAACTC
EX748310       --> CATCCCATTGCATCAAAGTTAGCGTCACCAAGACAAATATCCCTAAACAC
EX764386       --> CATCCCATTGCATCAAAGTTAGCGTCACCAAGACAAATATCCCTAAACTC
EX890515       --> CATCCCATTGCATCAAAGTTAGCGTCACCAAGACAAATATCCCTAAACTC
FD987461       --> CATCCCATTGCATCAAAGTTAGCGTCACCAAGACAAATATCCCTAAACTC
EV538664       --> CATCCCATTGCATCAAAGTTAGCGTCACCAAGACAAATATCCCTAAACTC
FD972446       --> CATCCCATTGCATCAAAGTTAGCGTCACCAAGACAAATATCCCTAAACTC
EX763717       --> CATCCCATTGCATCAAAGTTAGCGTCACCAAGACAAATATCCCTAAACTC
EY908464       --> CATCCCATTGCATCAAAGTTAGCGTCACCAAGACAAATATCCCTAAACTC
FD549576       --> CATCCCATTGCATCAAAGTTAGCGTCACCAAGACAAATATCCCTAAACTC
FY428285       --> CATCCCATTGCATCAAAGTTAGCGTCACCAAGACAAATATCCCTAAACTC
FY438809       --> CATCCCATTGCATCAAAGTTAGCGTCACCAAGACAAATATCCCTAAACTC
FY448460       --> CATCCCATTGCATCAAAGTTAGCGTCACCAAGACAAATATCCCTAAACTC
FY452893       --> CATCCCATTGCATCAAAGTTAGCGTCACCAAGACAAATATCCCTAAACTC
EV568358       --> ..................................................
FD979940       --> ..................................................
FD940952       --> ..................................................
EX904399       --> ..................................................
EX756209       --> ..................................................

               246    -    296
UN19722        --> TCCACCTTTGTCTCCCAACTTAAAACCCATAAGAAAACTGGCCGGTCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- TCCACCTTTGTCTCCCAACTTAAAACCCATAAGAAAACTGGCCGGTCATG
EX768317       <-- ..................................................
FD936707       <-- ..................................................
EX750891       <-- ..................................................
FD967868       <-- ..................................................
FD975909       <-- ..................................................
FD983516       <-- ..................................................
EV542621       <-- ..................................................
FD961753       <-- ..................................................
FD968338       <-- ..................................................
EV552020       --> TCCACCTTTGTCTCCCAACTTAAAACCCATAAGAAAACTGGCCGGTCATG
EW734872       --> TCCACCTTTGTCTCCCAACTTAAAACCCATAAGAAAACTGGCCGGTCATG
EX746497       --> TCCACCTTTGTCTCCCAACTTAAAACCCATAAGAAAACTGGCCGGTCATG
EX748310       --> TCCACCATTGTCTCCCAACTTAAAACCCATAAGAAAACTGGTCGGTCATG
EX764386       --> TCCACCTTTGTCTCCCAACTTAAAACCCATAAGAAAACTGGCCGGTCACG
EX890515       --> TCCACCTTTGTCTCCCAACTTAAAACCCATAAGAAAACTGGCCGGTCATG
FD987461       --> TCCACCTTTGTCTCCCAACTTAAAACCCATAAGGAAACTGGCCGGTCATG
EV538664       --> TCCACCTTTGTCTCCCAACTTAAAACCCATAAGAAAACTGGCCGGTCATG
FD972446       --> TCCACCTTTGTCTCCCAACTTAAAACCCATAAGAAAACTGGCCGGTCATG
EX763717       --> TCCACCTTTGTCTCCCAACTTAAAACCCATAAGAAAACTGGCCGGTCATG
EY908464       --> TCCACCTTTGTCTCCCAACTTAAAACCCATAAGAAAACTGGCCGGTCATG
FD549576       --> TCCACCTTTGTCTCCCAACTTAAAACCCATAAGAAAACCGGCCGGTCATG
FY428285       --> TCCACCTTTGTCTCCCAACTTAAAACCCATAAGAAAACTGGCCGGTCATG
FY438809       --> TCCACCTTTGTCTCCCAACTTAAAACCCATAAGAAAACTGGCCGGTCATG
FY448460       --> TCCACCTTTGTCTCCCAACTTAAAACCCATAAGAAAACTGGCCGGTCATG
FY452893       --> TCCACCTTTGTCTCCCAACTTAAAACCCATAAGAAAACTGGCCGGTCATG
EV568358       --> ..................................................
FD979940       --> ..................................................
FD940952       --> ..................................................
EX904399       --> ..................................................
EX756209       --> ..................................................

               296    -    346
UN19722        --> AGAAACCTAAACAGGCTGCTAAACCGGTGAAATTACCAGAGAGCACTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- AGAAACCTAAACAGGCTGCTAAACCGGTGAAATTACCAGAGAGCACTGAT
EX768317       <-- ..................................................
FD936707       <-- ..................................................
EX750891       <-- ..................................................
FD967868       <-- ..................................................
FD975909       <-- ..................................................
FD983516       <-- ..................................................
EV542621       <-- ..................................................
FD961753       <-- ..................................................
FD968338       <-- ..................................................
EV552020       --> AGAAACCTAAACAGGCTGCTAAACCGGTGAAATTACCAGAGAGCACTGAT
EW734872       --> AGAAACCTAAACAGGCTGCTAAACCGGTGAAATTACCAGAGAGCACTGAT
EX746497       --> AGAAACCTAAACAGGCTGCTAAACCGGTGAAATTACCAGAGAGCACTGAT
EX748310       --> AGAAACCTAAACAGGCTGCTAAACCGGTGAAATTACCAGAGAGCACTGAT
EX764386       --> AGAAACCTAAACAGGCTGCTAAACCGGTGAAATTACCAGAGAGCACTGAT
EX890515       --> AGAAACCTAAACAGGCTGCTAAACCGGTGAAATTATCAGAGAGCACTGAT
FD987461       --> AGAAACCTAAACAGGCTGCTAAACCGGTGAAATTACCAGAGAGCACTGAT
EV538664       --> AGAAACCTAAACAGGCTGCTAAACCGGTGAAATTACCAGAGAGCACTGAT
FD972446       --> AGAAACCTAAACAGGCTGCTAAACCGGTGAAATTACCAGAGAGCACTGAT
EX763717       --> GGAAACCTAAACAGGCTGCTAAACCGGTGAAATTACCAGAGAGCACTGAT
EY908464       --> AGAAACCTAAACAGGCTGCTAAACCGGTGAAATTACCAGAGAGCACTGAT
FD549576       --> AGAAACCTAAACAGGCTGCTAAACCGGTGAAATTATTTGAGAGCACTGAT
FY428285       --> AGAAACCTAAACAGGCTGCTAAACCGGTGAAATTACCAGAGAGCACTGAT
FY438809       --> AGAAACCTAAACAGGCTGCTAAACCGGTGAAATTACCAGAGAGCACTGAT
FY448460       --> AGAAACCTAAACAGGCTGCTAAACCGGTGAAATTACCAGAGAGCACTGAT
FY452893       --> AGAAACCTAAACAGGCTGCTAAACCGGTGAAATTACCAGAGAGCACTGAT
EV568358       --> .............GGCTGCTAAACCGGTGAAATTACAAGAGAGCACTGAT
FD979940       --> ..................................................
FD940952       --> ..................................................
EX904399       --> ..................................................
EX756209       --> ..................................................

               346    -    396
UN19722        --> GGTGGCTGCAGAGAGGTTAAGTCCTTGATGACTGTTCAGAAGCAACCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- GGTGGCTGCAGAGAGGTTAAGTCCTTGATGACTGTTCAGAAGCAACCTGG
EX768317       <-- ..................................................
FD936707       <-- ..................................................
EX750891       <-- ..................................................
FD967868       <-- ..................................................
FD975909       <-- ..................................................
FD983516       <-- ..................................................
EV542621       <-- ..................................................
FD961753       <-- ..................................................
FD968338       <-- ..................................................
EV552020       --> GGTGGCTGCAGAGAGGTTAAGTCCTTGATGACTGTTCAGAAGCAACCTGG
EW734872       --> GGTGGCTGCAGAGAGGTTAAGTCCTTGATGACTGTTCAGAAGCAACCTGG
EX746497       --> GGTGGCTTCAGAGAGGTTAAGTCCTTGATGACTGTTCAGAAGCAGCCTGG
EX748310       --> GGTGGCTGCAGAGAGGTTAAGTCCTTGATGACTGTTCAGAAGCAACCTGG
EX764386       --> GGTGGCTGCAGAGAGGTTAAGTCCTTGATGACTGTTCAGAAGCAACCTGG
EX890515       --> GGTGGCTGCAGAGAGGTTAAGTCATTGATGACTGTTCAGAAGCAACCTGG
FD987461       --> GGTGGCTGCAGAGAGGTTAAGTCCTTGATGACTGTTCAGAAGCAACCTGG
EV538664       --> GGTGGCTGCAGAGAGGTTAAGTCCTTGATGACTGTTCAGAAGCAACCTGG
FD972446       --> GGTGGCTGCAGAGAGGTTAAGTCCTTGATGACTGTTCAGAAGCAACCTGG
EX763717       --> GGTGGCTGCAGAGAGGTTAAGTCCTTGATGACTGTTCAGAAGCAACCTGG
EY908464       --> GGTGGCTGCAGAGAGGTTAAGTCCTTGATGACTGTTCAGAAGCAACCTGG
FD549576       --> GGTGGCTGCAGAGAGGTTAAGTCCTTGATGACTGTTCAGAAGCAACCTGG
FY428285       --> GGTGGCTGCAGAGAGGTTAAGTCCTTGATGACTGTTCAGAAGCAACCTGG
FY438809       --> GGTGGCTGCAGAGAGGTTAAGTCCTTGATGACTGTTCAGAAGCAACCTGG
FY448460       --> GGTGGCTGCAGAGAGGTTAAGTCCTTGATGACTGTTCAGAAGCAACCTGG
FY452893       --> GGTGGCTGCAGAGAGGTTAAGTCCTTGATGACTGTTCAGAAGCAACCTGG
EV568358       --> GGTGGCTGCAGAGAGGTTAAGTCCTTGATGACTGTTCAGAAGCAACCTGG
FD979940       --> ..gGGCTGCAGAGAGGTTAAGTCCTTGATGACTGTTCAGAAGCAACCTGG
FD940952       --> ..................................................
EX904399       --> ..................................................
EX756209       --> ..................................................

               396    -    446
UN19722        --> AAGTATAGCTGCTGCACGAAGACAAGAGGTTGCTATGAAACAAGAAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- AAGTATAGCTGCTGCACGAAGACAAGAGGTTGCTATGAAACAAGAcg...  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768317       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD936707       <-- ..................................................  Raphanus sativus var. oleiformis
EX750891       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD967868       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD975909       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983516       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV542621       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD961753       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD968338       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552020       --> AAGTATAGCTGCTGCACGAAGACAAGAGGTTGCTATGAAACAAGACGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734872       --> AAGTATAGCTGCTGCACGAAGACAAGAGGTTGCTATGAAACAAGACGAAA  Raphanus sativus cv Rat-Tail Radish #3870
EX746497       --> AAGTATAGCTGCTGCACGAAGACAAGAGGTTGCTATGAAACAAGAAGAAA  Raphanus raphanistrum subsp. maritimus
EX748310       --> AAGTATAGCTGCTGCACGAAGACAAGAGGTTGCTATGAAACAAGAAGAAA  Raphanus raphanistrum subsp. maritimus
EX764386       --> AAGTATAGCTGCTGCACGAAGACAAGAGGTTGCTATGAAACAAGACGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890515       --> AAGTATAGCTGCTGCACGAAGACAAGAGGTTGCTATGAAACAAGAAGAAA  Raphanus sativus var. oleiformis
FD987461       --> AAGTATAGCTGCTGCACGAAGACAAGAGGTTGCTATGAAACAAGAAGAAA  Raphanus raphanistrum subsp. landra
EV538664       --> AAGTATAGCTGCTGCACGAAGACAAGAGGTTGCTATGAAACAAGACGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972446       --> AAGTATAGCTGCTGCACGAAGGCAAGAGGTTGCTATGAAACAAGACGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763717       --> AAGTATAGCTGCTGCACGAAGACAAGAGGTTGCTATGAAACAAGACGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908464       --> AAGTATAGCTGCTGCACGAAGACAAGAGGTTGCTATGAAACAAGACGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549576       --> AAGTATAGCTGCTGCACGAAGACAAGAGGTTGCTATGAAACAAGAAGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428285       --> AAGTATAGCTGCTGCACGAAGACAAGAGGTTGCTAGGAAACAAGAAGAAA  Raphanus sativus cv GSK3-1
FY438809       --> AAGTATAGCTGCTGCACGAAGACAAGAGGTTGCTAGGAAACAAGAAGAAA  Raphanus sativus cv GSK3-1
FY448460       --> AAGTATAGCTGCTGCACGAAGACAAGAGGTTGCTAGGAAACAAGAAGAAA  Raphanus sativus cv GSK3-1
FY452893       --> AAGTATAGCTGCTGCACGAAGACAAGAGGTTGCTAGGAAACAAGAAGAAA  Raphanus sativus cv GSK3-1
EV568358       --> AAGTATAGCTGCTGCACGAAGACAAGAGGTTGCTATGAAACAAGAAGAAA  Raphanus raphanistrum subsp. landra
FD979940       --> AAGTATAGCTGCTGCACGAAGACAAGAGGTTGCTATGAAACAAGACGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940952       --> ..................................................  Raphanus sativus var. oleiformis
EX904399       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX756209       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               446    -    496
UN19722        --> GAAAGAAGAAAATCTCTCATTATGGTAGAGTAAAATCTGTAAAATCAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- ..................................................
EX768317       <-- ..............................................AAAC
FD936707       <-- ..................................................
EX750891       <-- ..................................................
FD967868       <-- ..................................................
FD975909       <-- ..................................................
FD983516       <-- ..................................................
EV542621       <-- ..................................................
FD961753       <-- ..................................................
FD968338       <-- ..................................................
EV552020       --> GAAAGAAGAAAATCTCTCATTATGGTAGAGTAAAATCTGTAAAATCAAAC
EW734872       --> GAAAGAAGAAAATCTCTCATTATGGTAGAGTAAAATCTGTAAAATCAAAC
EX746497       --> GAAAGAAGAAAATCTCTCATTATGGTAGAGTAAAATCTGTAAAATCAAAC
EX748310       --> GAAAGAAGAAAATCTCTCATTATGGTAGAGTAAAATCTGTAAAATCAAAC
EX764386       --> GAAAGAAGAAAATCTCTCATTATGGTAGAGTAAAATCTGTAAAATCAAAC
EX890515       --> GAAAGAAGAAAACCTCTCATTATGGTAGAGTAAAATCTGTAAAATCAAAC
FD987461       --> GAAAGAAGAAAATCTCTCATTATGGTAGAGTAAAATCTGTAAAATCAAAC
EV538664       --> GAAAGAAGAAAATCTCTCACTATGGTAGAGTAAAATCTGTAAAATCAAAC
FD972446       --> GAAAGAAGAAAATCTCTCACTATGGTAGAGTAAAATCTGTAAAATCAAAC
EX763717       --> GAAAGAAGAAAATCTCTCATTATGGTAGAGTAAAATCTGTAAAATCAAAC
EY908464       --> AAAA..............................................
FD549576       --> GAAAGAAGAAAATCTCTCATTATGGTAGAGTAAAATCTGTAAAATCAAAC
FY428285       --> GAAAGAAGAAAATCTCTCATTATGGTAGAGTAAAATCTGTAAAATCAAAC
FY438809       --> GAAAGAAGAAAATCTCTCATTATGGTAGAGTAAAATCTGTAAAATCAAAC
FY448460       --> GAAAGAAGAAAATCTCTCATTATGGTAGAGTAAAATCTGTAAAATCAAAC
FY452893       --> GAAAGAAGAAAATCTCTCATTATGGTAGAGTAAAATCTGTAAAATCAAAC
EV568358       --> GAAAGAAGAAAATCTCTCATTATGGTAGAGTAAAATCTGTAAAATCAAAC
FD979940       --> GAAAGAAGAAAATCTCTCATTATGGTAGAGTAAAATCTGTAAAATCAAAC
FD940952       --> ..................................................
EX904399       --> ..................................................
EX756209       --> ..................................................

               496    -    546
UN19722        --> GAAAATAACTTAAATGTTGAACATGAGAAGAAGAAGAGATGCAGTTTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- ..................................................
EX768317       <-- GAAAATAACTTAAATGTTGAACATGAGAAGAAGAAGAGATGCAGTTTCAT
FD936707       <-- .........................gagAGAAGAAGAGATGCAGTTTCAT
EX750891       <-- ..........................tgagagagAGAGATGCAGTT-CAT
FD967868       <-- ..................................................
FD975909       <-- ..................................................
FD983516       <-- ..................................................
EV542621       <-- ..................................................
FD961753       <-- ..................................................
FD968338       <-- ..................................................
EV552020       --> GAAAATAACTTAAATTTTGAACATGAGAAGAAGAAGAGATGCAGTTTCAT
EW734872       --> GAAAATAACTTAAATGTTGAACATGAGAAGAAGAAGAGATGCAGTTTCAT
EX746497       --> GAGAATAACTTAAATGTTGAACATGAGAAGAAGAAGAGATGCAGTTTCAT
EX748310       --> GAAAATAACTTAAATGTTGAACATGAGAAGAAGAAGAGATGCAGTTTCAT
EX764386       --> GAAAATAACTTAAATGTTGAACATGAGAAGAAGAAGAGATGCAGTTTCAT
EX890515       --> GAAAGTAACTTAAATGTTGAACATGAAAAGAAGAAGAGATGCAGTTTCAT
FD987461       --> GAAAATAACTTAAATGTTGAACATGAGAAGAAGAAGAGATGCAGTTTCAT
EV538664       --> GAAAATAACTTAAATGTTGAACATGAGAAGAAGAAGAGATGCAGTTTCAT
FD972446       --> GAAAATAACTTAAATGTTGAACATGAGAAGAAGAAGAGATGCAGTTTCAT
EX763717       --> GAAAATAACTTAAATGTTGAACATGAGAAGAAGAAGAGATGCAGTTTCAT
EY908464       --> ..................................................
FD549576       --> GA................................................
FY428285       --> GAAAATAACTTAAATGTTGAACATGAGAAGAAGAAGAGATGCAGTTTCAT
FY438809       --> GAAAATAACTTAAATGTTGAACATGAGAAGAAGAAGAGATGCAGTTTCAT
FY448460       --> GAAAATAACTTAAATGTTGAACATGAGAAGAAGAAGAGATGCAGTTTCAT
FY452893       --> GAAAATAACTTAAATGTTGAACATGAGAAGAAGAAGAGATGCAGTTTCAT
EV568358       --> GAAAATAACTTAAATGTTGAACATGAGAAGAAGAAGAGATGCAGTTTCAT
FD979940       --> GAAAATAACTTAAATGTTGAACATGAGAAGAAGAAGAGATGCAGTTTCAT
FD940952       --> ....................................AGATGCAGTTTCAT
EX904399       --> ..................................................
EX756209       --> ..................................................

               546    -    596
UN19722        --> CACTACAAGTTCAGATCCAATCTATGTGGCTTACCATGACGAAGAATGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768317       <-- CACTACAAGTTCAGATCCAATCTATGTGGCTTACCATGATGAAGAATGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD936707       <-- CACTACAAGTTCAGATCCA-TCTATGTGGCTTACCATGACGAAGAATGGG  Raphanus sativus var. oleiformis
EX750891       <-- CACTACAAGTTCAGATCCA-TCTATGTGGCTTACCATGACGAAGAATGGG  Raphanus raphanistrum subsp. maritimus
FD967868       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD975909       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983516       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV542621       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD961753       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD968338       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552020       --> CACTACAAGTTCAGATCCAATCTATGTGGCTTACCATGATGAAGAATGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734872       --> CACTACAAGTTCAGgtttgtaaaatttacttgttctgcaag.........  Raphanus sativus cv Rat-Tail Radish #3870
EX746497       --> CACTACAAGTTCAGATCCAATCTATGTGGCTTACCATGACGAAGAATGGG  Raphanus raphanistrum subsp. maritimus
EX748310       --> CACTACAAGTTCAGATCCAATCTATGTGGCTTACCATGACGAAGAATGGG  Raphanus raphanistrum subsp. maritimus
EX764386       --> CACTACAAGTTCAGATCCAATCTATGTGGCTTACCATGATGAAGAATGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890515       --> CACTACAAGTTCAGATCCAATCTATGTGGCTTACCATGACGAAGAATGGG  Raphanus sativus var. oleiformis
FD987461       --> CACTACAAGTTCAGATCCAATCTATGTGGCTTACCATGACGAAGAATGGG  Raphanus raphanistrum subsp. landra
EV538664       --> CACTACAAGTTCAGATCCAATCTATGTGGCTTACCATGATGAAGAATGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972446       --> CACTACAAGTTCAGATCCAATCTATGTGGCTTACCATGATGAAGAATGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763717       --> CACTACAAGTTCAGATCCAATCTATGTGGCTTACCATGATGAAGAATGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908464       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549576       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428285       --> CACTACAAGTTCAGATCCAATCTATGTGGCTTACCATGACGAAGAATGGG  Raphanus sativus cv GSK3-1
FY438809       --> CACTACAAGTTCAGATCCAATCTATGTGGCTTACCATGACGAAGAATGGG  Raphanus sativus cv GSK3-1
FY448460       --> CACTACAAGTTCAGATCCAATCTATGTGGCTTACCATGACGAAGAATGGG  Raphanus sativus cv GSK3-1
FY452893       --> CACTACAAGTTCAGATCCAATCTATGTGGCTTACCATGACGAAGAATGGG  Raphanus sativus cv GSK3-1
EV568358       --> CACTACAAGTTCAGATCCAATCTATGTGGCTTACCATGATGAAGAATGGG  Raphanus raphanistrum subsp. landra
FD979940       --> CACTACAAGTTCAGATCCAATCTATGTGGCTTACCATGATGAAGAATGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940952       --> CACTACAAGTTCAGATCCAATCTATGTGGCTTACCATGACGAAGAATGGG  Raphanus sativus var. oleiformis
EX904399       --> .....gAAGTTCAGATCCAATCTATGTGGCTTACCATGACGAAGAATGGG  Raphanus sativus cv Rat-Tail Radish #3870
EX756209       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               596    -    646
UN19722        --> GAGTTCCTGTTCATGATGACAACCTACTGTTTGAGCTTCTGGTGTTAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- ..................................................
EX768317       <-- GAGTTCCTGTTCATGATGACAACCTACTGTTTGAGCTTCTGGTGTTAACC
FD936707       <-- GAGTTCCTGTTCATAATGACAACCTACTGTTTGAGCTTCTGGTGTTAACC
EX750891       <-- GAGTTCCTGTTCATGATGACAACCTACTGTTTGAGCTTCTGGTGTTAACC
FD967868       <-- ..................ACAACCTACTGTTTGAGCTTCTGGTGTTAACC
FD975909       <-- ..................................................
FD983516       <-- ..................................................
EV542621       <-- ..................................................
FD961753       <-- ..................................................
FD968338       <-- ..................................................
EV552020       --> GAGTTCCTGTTCATGATGACAACCTACTGTTTGAGCTTCTGGTGTTAACC
EW734872       --> ..................................................
EX746497       --> GAGTTCCTGTTCATGATGACAACCTACTGTTTGAGCTTCTGGTGTTAACC
EX748310       --> GAGTTCCTGTTCATGATGACAACCTACTTTTTGAGCTTCTGGTGTTAACC
EX764386       --> GAGTTCCTGTTCATGATGACAACCTACTGTTTGAGCTTCTGGTGTTAACC
EX890515       --> GAGTTCCTGTTCATGATGACAACCTACTGTTTGAGCTTCTGGTGTTAGCC
FD987461       --> GAGTTCCTGTTCATGATGACAACCTACTGTTTGAGCTTCTGGTGTTAACC
EV538664       --> GAGTTCCTGTTCATGATGACAACCTACTGTTTGAGCTTCTGGTGTTAACC
FD972446       --> GAGTTCCTGTTCATGATGACAACCTACTGTTTGAGCTTCTGGTGTTAACC
EX763717       --> GAGTTCCTGTTCATGATGACAACCTACTGTTTGAGCTTCTGGTGTTAACC
EY908464       --> ..................................................
FD549576       --> ..................................................
FY428285       --> GAGTTCCTGTTCATGATGACAACCTACTGTTTGAGCTTCTGGTGTTAACC
FY438809       --> GAGTTCCTGTTCATGATGACAACCTACTGTTTGAGCTTCTGGTGTTAACC
FY448460       --> GAGTTCCTGTTCATGATGACAACCTACTGTTTGAGCTTCTGGTGT-AACC
FY452893       --> GAGTTCCTGTTCATGATGACAACCTACTGTTTGAGCTTCTGGTGTTAACC
EV568358       --> GAGTTCCTGTTCATGATGACAACCTACTGTTTGAGCTTCTGGTGTTAACC
FD979940       --> GAGTTCCTGTTCATGATGACAACCTACTGTTTGAGCTTCTGGTGTTAACC
FD940952       --> GAGTTCCTGTTCATAATGACAACCTACTGTTTGAGCTTCTGGTGTTAACC
EX904399       --> GAGTTCCTGTTCATGATGACAACCTACTGTTTGAGCTTCTGGTGTTAACC
EX756209       --> ........................gACTGTTTGAGCTTCTGGTGTTAACC

               646    -    696
UN19722        --> GGAGCTCAAGTAGGATCCGAC-TGGACTTCGGTTTTGAAGAGAAGAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- ..................................................
EX768317       <-- GGAGCTCAAGTAGGATCCGAC-TGGACTTCGGTTTTGAAGAGAGGAAACA
FD936707       <-- GGAGCTCAAGTAGGATCCGAC-TGGACTTCGGTTTTGAAGAGAAGAAACA
EX750891       <-- GGAGCTCAAGTAGGATCCGAC-TGGACTTCGGTTTTGAAGAGAAGAAACA
FD967868       <-- GGAGCTCAAGTAGGATCCGAC-TGGACTTCGGTTTTGAAGAGAAGAAACA
FD975909       <-- ......................................AGAGAAGAAACA
FD983516       <-- ..................................................
EV542621       <-- ..................................................
FD961753       <-- ..................................................
FD968338       <-- ..................................................
EV552020       --> GGAGCTCAAGTAGGATCCGAC-TGGACTTCGGTTTTGAAGAGAAGAAACA
EW734872       --> ..................................................
EX746497       --> GGAGCTCAAGTAGGATCCGAC-TGGACTTCGGTTTTGAAGAGAAGAA-CA
EX748310       --> GGAGCTCAAGTAG-ATCCGAC-TGGA........................
EX764386       --> GGAGCTCAAG........................................
EX890515       --> GGAGCTCAAGTAGGATCCGAC-TGGACTTCGGTTTTGAAGAGAAGAAACA
FD987461       --> GGAGCTCAAGTAGGATCCGAC-TGGACTTCGGTTTTGAAGAGAAGAAACA
EV538664       --> GGAGCTCAAGTAGGATCCGAC-TGGACTTCGGTTTTGAAGAGAAGAAACA
FD972446       --> GGAGCTCAAGTAGGATCCGACCGGGACTTCGGTTTTGAAGAGAAGAA-CA
EX763717       --> GGAGCTCAAGTAGGATCCGAC-TGGACTTCGGTTTTGAAGAGAAGAAACA
EY908464       --> ..................................................
FD549576       --> ..................................................
FY428285       --> GGAGCTCAAGTAGGATCCGAC-TGGACTTCGGTTTTGAAGAGAAGAAACA
FY438809       --> GGAGCTCAAGTAGGATCCGAC-TGGACTTCGGTTTTGAAGAGAAGAAACA
FY448460       --> GGAGCTCAAGTAGGATCCGAC-TGGACTTCGGTTTT..............
FY452893       --> GGAGCTCAAGTAGGATCCGAC-TGGACTTCGGTTTTGAAGAGAAGAAACA
EV568358       --> GGAGCTCAAGTAGGATCCGAC-TGGACTTCGGTTTTGAAGAGAAGAAACA
FD979940       --> GGAGCTCGAGTAGGATCCGAC-TGGACTTCGGTTTTGAAGAGAAGAAACA
FD940952       --> GGAGCTCAAGTAGGATCCGAC-TGGACTTCGGTTTTGAAGAGAAGAAACA
EX904399       --> GGAGCTCAAGTAGGATCCGAC-TGGACTTCGGTTTTGAAGAGAAGAAACA
EX756209       --> GGAGCTCAAGTAGGATCCGAC-TGGACTTCGGTTTTGAAGAGAAGAAACA

               696    -    746
UN19722        --> CTTTTAGAGAGGCTTTCTCTGGTTTCGAAGCAGAGCTTGTCGCAGAGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- ..................................................
EX768317       <-- CTTTTAGAGAGGCTTTCTCTGGTTTCGAAGCAGAGCTTGTCGCAGAGTTC
FD936707       <-- CTTTTAGAGAGGCTTTCTCTGGTTTCGAAGCAGAGCTTGTCGCAGAGTTC
EX750891       <-- CTTTTAGAGAGGCTTTCTCTGGTTTCGAAGCAGAGCTTGTCGCAGAGTTC
FD967868       <-- CTTTTAGAGAGGCTTTCTCTGGTTTCGAAGCAGAGCTTGTCGCAGAGTTC
FD975909       <-- CTTTTAGAGAGGCTTTCTCTGGTTTCGAAGCAGAGCTTGTCGCAGAGT--
FD983516       <-- ....................GGTTTCGAAGCAGAGCTTGTCGCAGAGTTC
EV542621       <-- ..................................................
FD961753       <-- ..................................................
FD968338       <-- ..................................................
EV552020       --> CTTTTAGAGAGGCTTTCTCTGGTTTCGAAGCAGAGCTTGTCGCAGAGTTC
EW734872       --> ..................................................
EX746497       --> CTTTTAGAGAG-CTTTCTCTGGTTTCGAAGCAGAGCTTGTCGCAGAGT-C
EX748310       --> ..................................................
EX764386       --> ..................................................
EX890515       --> CTTTTAGAGAGGCTT-CTCTGGTTTCGAAGCAGAGCTTGTCGCAGAGT..
FD987461       --> CTTTTAGAGAG-CTTTCTCTGGTT-CGAAGCAGAGCTTGTCGCAGAGT-C
EV538664       --> CTTTTAGAGAGGCTTTCTCTGGTTTCGAAGCAGAGCTTGTCGCAGAGTTC
FD972446       --> CTTTTAGAGAG-C-TTCTCTGGTTTCGAAGCGGAGCTTGTCGCAGAGT-C
EX763717       --> CTTTTAGA..........................................
EY908464       --> ..................................................
FD549576       --> ..................................................
FY428285       --> CTTTTAGAGAGGCTTTCTCTGGTTTCGAAGCAGAGCTTGTCGCAGAGTTC
FY438809       --> CTTTTAGAGAGGCTTTCTCTGGTTTCGAAGCAGAGCTTGTCGCAGAGTTC
FY448460       --> ..................................................
FY452893       --> CTTTTAGAGAGGCTTTCTCTGGTTTCGAAGCAGAGCTTGTCGCAGAGTTC
EV568358       --> CTTTTAGAGAGGCTTTCTCTGGTTCCGAGGCAGAGCTTGTCGCAGAGTTC
FD979940       --> CTTTTAGAGAGGCTTTCTCTGGTTTCGAAGCAGAGCTTGTCGCAGAGTTC
FD940952       --> CTTTTAGAGAGGCTTTCTCTGGTTTCGAAGCAGAGCTTGTCGCAGAGTTC
EX904399       --> CTTTTAGAGAGGCTTTCTCTTGTTTTGAAGCAGAGCTTGTCGCAGAGTTT
EX756209       --> CTTTTAGAGAGGCTTTCTCTGGTTTCGAAGCAGAGCTTGTCGCAGAGTTC

               746    -    796
UN19722        --> AGCGAGAAGAAGATACAGTCGATAGTCAACGACTATGGAATTGGCCTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768317       <-- AGCGAGAAGAAGATACAGTCGATAGTCAACGACTATGGAATTGGCCTTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD936707       <-- AACGAGAAGAAGATACAGTCGATAGTCAACGACTATGGAATTGGCCTTAG  Raphanus sativus var. oleiformis
EX750891       <-- AACGAGAAGAAGATACAGTCGATAGTCAACGACTATGGAATTGGCCTTAG  Raphanus raphanistrum subsp. maritimus
FD967868       <-- AGCGAGAAGAAGATACAGTCGATAGTCAACGACTATGGAATTGGCCTTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD975909       <-- -TCGAGAAGAAGATACAGTCGATAGTCAACGACTATGGAATTGGCCTTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983516       <-- AACGAGAAGAAGATACAGTCGATAGTCAACGACTATGGAATTGGCCTTAG  Raphanus raphanistrum subsp. landra
EV542621       <-- ......AAGAAGATACAGTCGATAGTCAACGACTATGGAATTGGCCTTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD961753       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD968338       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552020       --> AGCGAGAAGAAGATACAGTCGATAGTCAACGACTATGGAATTGGCCTTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734872       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX746497       --> AACGAGA-G-AGATACAGTCGATAGTCAcg....................  Raphanus raphanistrum subsp. maritimus
EX748310       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX764386       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890515       --> ..................................................  Raphanus sativus var. oleiformis
FD987461       --> AACGAGA-G-AGATACAGTCGATAGTCA-CGACTATGGA-TTGGC-TTAG  Raphanus raphanistrum subsp. landra
EV538664       --> AGCGAGAAGAAGATACAGTCGATAGTCAACGACTATGGAATTGGCCT...  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972446       --> AGCGAGA-G-AGATACAGTCGATAGTC.......................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763717       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908464       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549576       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428285       --> AGCGAGAAGAAGATACAGTCGATAGTCAACGACTATGGAATTGGCCTTAG  Raphanus sativus cv GSK3-1
FY438809       --> AGCGAGAAGAAGATACAGTCGATAGTCAACGACTATGGAATTGGCCTTAG  Raphanus sativus cv GSK3-1
FY448460       --> ..................................................  Raphanus sativus cv GSK3-1
FY452893       --> AGCGAGAAGAAGATACAGTCGATAGTCAACGACTATGGAATTGGCCTTAG  Raphanus sativus cv GSK3-1
EV568358       --> AGCGAGAAGAAGATACAGTCGATAGTCAACGACTACGGAATTGGCCTTAG  Raphanus raphanistrum subsp. landra
FD979940       --> ---GAGAAGAAGATACAGTCGATAGTCAACGACTATGGAATTGGCCTTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940952       --> AACGAGAAGAAGATACAGTCGATAGTCAACGACTATGGAATTGGCCTTAG  Raphanus sativus var. oleiformis
EX904399       --> AACGAGAAGAAGATACAGTCGATAGTCAACGACTATGGAATTGGCCTTAG  Raphanus sativus cv Rat-Tail Radish #3870
EX756209       --> AGCGAGAAGAAGATACAGTCGATAGTCAACGACTATGGAATTGGCCTTAG  Raphanus raphanistrum subsp. raphanistrum (MS)

               796    -    846
UN19722        --> CCAAGTCCTTGCAATTGTTGACAACTCTAAACAAATTCTCAAGGTTAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768317       <-- CCAAGTCCTTGCAATTGTTGACAACTCTAAACAAATTCTCAAGGTTAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD936707       <-- CCAAGTCCTTGCAATTGTTGACAACTCTAAACAAATTCTCAAGGTTAAAA  Raphanus sativus var. oleiformis
EX750891       <-- CCAAGTCCTTGCAATTGTTGACAACTCTAAACAAATTCTCAAGGTTAAAA  Raphanus raphanistrum subsp. maritimus
FD967868       <-- CCAAGTCCTTGCAATTGTTGACAACTCTAAACAAATTCTCAAGGTTAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD975909       <-- CCAAGTCCTTGCAATTGTTGACAACTCTAAACAAATTCTCAAGGTTAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983516       <-- CCAAGTCCTTGCAATTGTTGACAACTCTAAACAAATTCTCAAGGTTAAAA  Raphanus raphanistrum subsp. landra
EV542621       <-- CCAAGTCCTTGCAATTGTTGACAACTTTAAACAAATTTTCAAGGTTAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD961753       <-- ...........................................GTTAAAA  Raphanus raphanistrum subsp. maritimus
FD968338       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552020       --> CCAAGTCCTTGCAA....................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734872       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX746497       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX748310       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX764386       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890515       --> ..................................................  Raphanus sativus var. oleiformis
FD987461       --> C-AAGTCCTTGCAATTGTgacactc.........................  Raphanus raphanistrum subsp. landra
EV538664       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972446       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763717       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908464       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549576       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428285       --> CCAAGTCCTTGCAATTGTTGACAACTCTAAACAAATTCTCAAGGTTAAAA  Raphanus sativus cv GSK3-1
FY438809       --> CCAAGTCCTTGCAATTGTTGACAACTCTAAACAAATTCTCAAGGTTAAAA  Raphanus sativus cv GSK3-1
FY448460       --> ..................................................  Raphanus sativus cv GSK3-1
FY452893       --> CCAAGTCCTTGCAATTGTTG..............................  Raphanus sativus cv GSK3-1
EV568358       --> CCAAGTCCTTGCAATTGTTGACAACTCTAAACAAATTCTCAAGGTTAAAA  Raphanus raphanistrum subsp. landra
FD979940       --> CCAAGTCCTTGCAATTGTTGACAACTCTAAACAAATTCTCAAGGTTAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940952       --> CCAAGTCCTTGCAATTGTTGACAACTCTAAACAAATTCTCAAGGTTAAAA  Raphanus sativus var. oleiformis
EX904399       --> CCAAGTCCTTGCAATTGTTGACAACTCTAAACAAATTCTCAAGGTTAAAA  Raphanus sativus cv Rat-Tail Radish #3870
EX756209       --> CCAAGTCCTTGCAATTGTTGACAACTCTAAACAAATTCTCAATGTTAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               846    -    896
UN19722        --> GAGATTTTGGATCATTCAACAAATACATTTGGGAATTCATGAAGCACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768317       <-- AAGATTTTGGATCATTCAACAAATACATTTGGGAATTCATGAAGCACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD936707       <-- GAGATTTTGGATCATTCAACAAATACATTTGGGAATTCATGAAGCACAAA  Raphanus sativus var. oleiformis
EX750891       <-- GAGATTTTGGATCATTCAACAAATACATTTGGGAATTCATGAAGCACAAA  Raphanus raphanistrum subsp. maritimus
FD967868       <-- GAGATTTTGGATCATTCAACAAATACATTTGGGAATTCATGAAGCACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD975909       <-- AAGATTTTGGATCATTCAACAAATACATCTGGGAATTCATGAAGCACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983516       <-- GAGATTTTGGATCATTCAACAAATACATTTGGGAATTCATGAAGCACAAA  Raphanus raphanistrum subsp. landra
EV542621       <-- AAGATTTTGGATCATTCAACAAATACATTTGGGAATTCATGAAGCACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD961753       <-- GAGATTTTGGATCATTCAACAAATACATATGGGAATTCATGAAGCACAAA  Raphanus raphanistrum subsp. maritimus
FD968338       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552020       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734872       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX746497       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX748310       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX764386       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX890515       --> ..................................................  Raphanus sativus var. oleiformis
FD987461       --> ..................................................  Raphanus raphanistrum subsp. landra
EV538664       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972446       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763717       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908464       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549576       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428285       --> GAGATTTTGGATCATTCAACAAATACATTTGGGAATTCATGAAGCACAAA  Raphanus sativus cv GSK3-1
FY438809       --> GAGATTTTGGATCATTCAACAAATACATTTGGGAAATCATGAAGCACAAA  Raphanus sativus cv GSK3-1
FY448460       --> ..................................................  Raphanus sativus cv GSK3-1
FY452893       --> ..................................................  Raphanus sativus cv GSK3-1
EV568358       --> GAGATTGTGGATCATTCAACAAATACATTTGGGAATTCATGAAGCACAAA  Raphanus raphanistrum subsp. landra
FD979940       --> AAGATTTTGGATCATTCAACAAATACATCTGGGAATTCATGAAGCACAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940952       --> GAGATTTTGGATCATTCAACAAATACATTTGGGAATTCATGAAGCACAAA  Raphanus sativus var. oleiformis
EX904399       --> GAGATTTTGGATCATTCAACAAATACATTTGGGAATTCATGAAGCACAAA  Raphanus sativus cv Rat-Tail Radish #3870
EX756209       --> AAGATTTTGGATCATTCAACAAATACATTTGGGAATTCATGAAGCACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               896    -    946
UN19722        --> CCGGTTACCACAGAATACACATCTTGCCAAAA-GATTCCGGTGAAGACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- ..................................................
EX768317       <-- CCGGTTACCACAGAATACACATCTTGCCAAAA-GATTCCGGTGAAGACAT
FD936707       <-- CCGGTTACCACAGAATACACATCTTGCCAAAA-GATTCCGGTGAAGACAT
EX750891       <-- CCGGTTACCACAGAATACACATCTTGCCAAAA-GATTCCGGTGAAGACAT
FD967868       <-- CCGGTTACCACAGAATACACATCTTGCCAAAA-GATTCCGGTGAAGACAT
FD975909       <-- CCGGTTACCACAGAATACACATCTTGCCAAAA-GATTCCGGTGAAGACAT
FD983516       <-- CCGGTTACCACAGAATACACATCTTGCCAAAA-GATTCCGGTGAAGACAT
EV542621       <-- CCGGTTACCACAGAATACACATTTTGCCAAAA-GATTCCGGGGAAGACAT
FD961753       <-- CCGGTTACCACAGAATACACATCTTGCCAAAA-GATTCCGGTGAAGACAT
FD968338       <-- ................ACACATCTTGCCAAAAAGATTCCGGTGAAGACAT
EV552020       --> ..................................................
EW734872       --> ..................................................
EX746497       --> ..................................................
EX748310       --> ..................................................
EX764386       --> ..................................................
EX890515       --> ..................................................
FD987461       --> ..................................................
EV538664       --> ..................................................
FD972446       --> ..................................................
EX763717       --> ..................................................
EY908464       --> ..................................................
FD549576       --> ..................................................
FY428285       --> CCGGTTACCACAGAATACACATC...........................
FY438809       --> CCGGTTACCACAGAATACACATCTTGGCAAAA-GATTCCGGTGAAGACAT
FY448460       --> ..................................................
FY452893       --> ..................................................
EV568358       --> CCGGTTACCACAGAATACACATCTTGCCAAAA-GATTCCGGTGAAGACAT
FD979940       --> CCGGTTACCACAGAATACACATCTTGCCAAAA-GATTCCGGTGAAGACAT
FD940952       --> CCGGTTACCACAGAATACACATCTTGCCAAAA-GATTCCGGTGAAGACAT
EX904399       --> CCGTTTACCACAGAATACACATCTCGCCAAAA-GATTCCGGTGAAGACAT
EX756209       --> CCGGTTACCACAGAATACACATCTTGCCAAAA-GATTCCGGTGAAGACAT

               946    -    996
UN19722        --> CAAAATCAGAAACCATAAGCAAAGACATGGTTCGTCGTGGGTTTAGATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- ..................................................
EX768317       <-- CAAAATCAGAAACCATAAGCAAAGACATGGTTCGTCGTGGGTTTAGATTC
FD936707       <-- CAAAATCAGAAACCATAAGCAAAGACATGGTTCGTCGTGGTTTTAGATTC
EX750891       <-- CCAAATCAGAAACCATAAGCAAAGACATGGTTCGTCGTGGATTTAGATTC
FD967868       <-- CAAAATCAGAAACCATAAGCAAAGACATGGTTTGTCGTGGGTTTAGATTC
FD975909       <-- CAAAATCAGAAACCATAAGCAAAGACATGGTTCGTCGTGGGTTTAGATTC
FD983516       <-- CAAAATCAGAAACCATAAGCAAAGACATGGTTCGTCGTGGGTTTAGATTC
EV542621       <-- CAAAATCAGAAACCATAAGCAAAGACATGGTTTGTCGTGGGTTTAGATTC
FD961753       <-- CAAAATCAGAAACCATAAGCAAAGACATGGTTCGTCGTGGGTTTAGATTC
FD968338       <-- CAAAATCAGAAACCATAAGCAAAGACATGGTTCGTCGTGGGTTTAGATTC
EV552020       --> ..................................................
EW734872       --> ..................................................
EX746497       --> ..................................................
EX748310       --> ..................................................
EX764386       --> ..................................................
EX890515       --> ..................................................
FD987461       --> ..................................................
EV538664       --> ..................................................
FD972446       --> ..................................................
EX763717       --> ..................................................
EY908464       --> ..................................................
FD549576       --> ..................................................
FY428285       --> ..................................................
FY438809       --> CAAAATCAGAAACCA...................................
FY448460       --> ..................................................
FY452893       --> ..................................................
EV568358       --> CAAAATCAGAAACCATAAGCAAAGACATGGTTCGTCGTGGGTTTAGATTC
FD979940       --> CAAAATCAGAAACCATAAGCAAAGACATGGTTCGTCGTGGGTTTAGATTC
FD940952       --> CAAAATCAGAAACCATAAGCAAAGACATGGTTCGTCGTGGTTTTAGATTC
EX904399       --> CAAAATCAGAAACCATAAGCAAAGACATGGTTCGTCGTGGGTTTAGATTC
EX756209       --> CAAAATCAGAAACCATAAGCAAAGACATGGTTCGTCGTGGGTTTAGATTC

               996    -   1046
UN19722        --> GTTGGCCCGACAGTTATACATTCGTTAATGCAAGCCGCC-GGTTTGACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- ..................................................
EX768317       <-- GTTGGCCCGACAGTTATACATTCGTTAATGCAAGCCGCC-GGTTTGACCA
FD936707       <-- GTTGGCCCGACAGTTATACATTCGTTAATGCAAGCCGCC-GGTTTGACCA
EX750891       <-- GTTGGCCCGACAGTTATACATTCGTTAATGCAAGCCGCC-GGTTTGACCA
FD967868       <-- GTTGGCCCGACAGTTATACATTCGTTAATGCAAGCCGCC-GGTTTGACCA
FD975909       <-- GTTGGCCCGACAGTTATACATTCGTTAATGCAAGCCACC-GGTTTGACCA
FD983516       <-- GTTGGCCCGACAGTTATACATTCGTTAATGCAAGCCGCC-GGTTTGACCA
EV542621       <-- GTTGGCCCGACAGTTATACATTCGTTAATGCAAGCCGCC-GGTTTGACCA
FD961753       <-- GTTGGCCCGACAGTTATACATTCGTTAATGCAAGCCGCC-GGTTTGACCA
FD968338       <-- GTTGGCCCGACAGTTATACATTCGTTAATGCAAGCCGCC-GGTTTGACCA
EV552020       --> ..................................................
EW734872       --> ..................................................
EX746497       --> ..................................................
EX748310       --> ..................................................
EX764386       --> ..................................................
EX890515       --> ..................................................
FD987461       --> ..................................................
EV538664       --> ..................................................
FD972446       --> ..................................................
EX763717       --> ..................................................
EY908464       --> ..................................................
FD549576       --> ..................................................
FY428285       --> ..................................................
FY438809       --> ..................................................
FY448460       --> ..................................................
FY452893       --> ..................................................
EV568358       --> GTTGGCCCGACAGTTATACATTCGTTAATGCAAGCCGCCCGGTTTGACCA
FD979940       --> GTTGGCCCGACAGTTATACATTCGTTA-TGCAAGCCACC-GGTT-GACCA
FD940952       --> GTTGGCCCGACAGTTATACATTCGTTAATGCAAGCCGCC-GGTTTGACCA
EX904399       --> GTTGGCCCGACAGTTATACATTCGTTAATGCAAGCCGCC-GGTTTGACCA
EX756209       --> GTTGGCCCGACAGTTATACATTt...........................

               1046   -   1096
UN19722        --> ACGACCATTTGATCACTTGCCCGAGACATCTCGAGTGTAAGGCCAAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- ..................................................
EX768317       <-- ACGACCATTTGATCACTTGCCCGAGACATCTCGAGTGTAAGGCCAAAGCT
FD936707       <-- ACGACCATTTGATCACTTGCCCGAGACATCTCGAGTGTAAGGCCAAAGC-
EX750891       <-- ACGACCATTTGATCACTTGCCCGAGACATCTCGAGTGTAAGGCCAAAGCT
FD967868       <-- ACGACCATTTGATCACTTGCCCGAGACATCTCGAGTGTAAGGCCAAAGCT
FD975909       <-- ACGACCATTTGATCACTTGCCCGAGACATCTCGAGTGTAAGGCCAAAGCT
FD983516       <-- ACGACCATTTGATCACTTGCCCGAGACATCTCGAGTGTAAGGCCAAAGCT
EV542621       <-- ACGACCATTTGATCACTTGCCCGAGACATTTCGAGTGTAAGGCCAAAGCT
FD961753       <-- ACGACCATTTGATCACTTGCCCGAGACATCTCGAGTGTAAGGCCAAAGCT
FD968338       <-- ACGACCATTTGATCACTTGCCCGAGACATCTCGAGTGTAAGGCCAAAGCT
EV552020       --> ..................................................
EW734872       --> ..................................................
EX746497       --> ..................................................
EX748310       --> ..................................................
EX764386       --> ..................................................
EX890515       --> ..................................................
FD987461       --> ..................................................
EV538664       --> ..................................................
FD972446       --> ..................................................
EX763717       --> ..................................................
EY908464       --> ..................................................
FD549576       --> ..................................................
FY428285       --> ..................................................
FY438809       --> ..................................................
FY448460       --> ..................................................
FY452893       --> ..................................................
EV568358       --> ACGACCATTTGATCACTTGCCCGAGACATCTCGAGTGTAAG-CCAAAGCT
FD979940       --> ACGACCATTTGATCACTTGCCCGAGACATCTCGAGTGTA-GGCCAAAGCT
FD940952       --> ACGACCATTTGATCACTTGCCCGAGACATCTCGAGTGTAAGGCCAAAGC-
EX904399       --> ACGACCATTTGATCACTTGCCCCAGACATCTCGAGTGTAAGGCCAAAGCT
EX756209       --> ..................................................

               1096   -   1146
UN19722        --> GGTCTATAGGCAAAAGAAGATCATTGTTTTGGTCACATTGGCTTTATTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- ..................................................
EX768317       <-- GGTCTATAGGCAAAAGAAGATCATTGTTTTGGTCACATTGGCTTTATTTA
FD936707       <-- CGTCTATAGGCAAAAGAAGATCATTGT--TGGTCACATTGGCTTTATTTA
EX750891       <-- GGTCTATAGGCAAAAGAAGATCATTGTTTTGGTCACATTGGCTTTATTTA
FD967868       <-- GGTCTATAGGCAAAAGAAGATCATTGTTTTGGTCACATTGGCTTTATTTA
FD975909       <-- GGTCTATAGGCAAAAGAAGATCATTGTTTTGGTCACATTGGCTTTATTTA
FD983516       <-- GGTCTATAGGCAAAAGAAGATCATTGTTTTGGTCACATTGGCTTTATTTA
EV542621       <-- GGTTTATAGGCAAAAGAAGATCATTGTTTTGGTCACATTGGCTTTATTTA
FD961753       <-- GGTCTATAGGCAAAAGAAGATCATTGTTTTGGTCACATTGGCTTTATTTA
FD968338       <-- GGTCTATAGGCAAAAGAAGATCATTGTTTTGGTCACATTGGCTTTATTTA
EV552020       --> ..................................................
EW734872       --> ..................................................
EX746497       --> ..................................................
EX748310       --> ..................................................
EX764386       --> ..................................................
EX890515       --> ..................................................
FD987461       --> ..................................................
EV538664       --> ..................................................
FD972446       --> ..................................................
EX763717       --> ..................................................
EY908464       --> ..................................................
FD549576       --> ..................................................
FY428285       --> ..................................................
FY438809       --> ..................................................
FY448460       --> ..................................................
FY452893       --> ..................................................
EV568358       --> GGTCTATAG-CAAAAGAAGATCATTGTTTTGGTCACATTGGCTTTATTTA
FD979940       --> GGT...............................................
FD940952       --> CGTCTATAGGCAAAAGAAGATCATTGTT--GGTCACATTGGCTTTATTTA
EX904399       --> GGTCTATAGGTAAAAaa.................................
EX756209       --> ..................................................

               1146   -   1196
UN19722        --> TTAGTTTTACGTAATCATAATAATATTGATGTGTTATTATTGTAGCACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- ..................................................
EX768317       <-- TTAGTTTTACGTAATCATAATAATATTGATGTGTTATTATTGTAGCACTA
FD936707       <-- TTAGTTTTACGTAATCATAATAATATTGATGTGTTATTATTGTAGCACTA
EX750891       <-- TTAGTTTTACGTAATCATAATAATATTGATGTGTTATTATTGTAGCACTA
FD967868       <-- TTAGTTTTACGTAATCATAATAATATTGATGTGTTATTATTGTAGCACTA
FD975909       <-- TTAGTTTTACGTAATCATAATAATATTGATGTGTTATTATTGTAGCACTA
FD983516       <-- TTAGTTTTACGTAATCATAATAATATTGATGTGTTATTATTGTAGCACTA
EV542621       <-- TTAGTTTTACGTAATCATAATAATATTGATGTGTTATTATTGTAGCACTA
FD961753       <-- TTAGTTTTACGTAATCATAATAATATTGATGTGTTATTATTGTAGCACTA
FD968338       <-- TTAGTTTTACGTAATCATAATAATATTGATGTGTTATTACTGTAGCACTA
EV552020       --> ..................................................
EW734872       --> ..................................................
EX746497       --> ..................................................
EX748310       --> ..................................................
EX764386       --> ..................................................
EX890515       --> ..................................................
FD987461       --> ..................................................
EV538664       --> ..................................................
FD972446       --> ..................................................
EX763717       --> ..................................................
EY908464       --> ..................................................
FD549576       --> ..................................................
FY428285       --> ..................................................
FY438809       --> ..................................................
FY448460       --> ..................................................
FY452893       --> ..................................................
EV568358       --> TTAGTTTTACGTAtcat.................................
FD979940       --> ..................................................
FD940952       --> TTAGTTTTACGTAATCATAATAATATTGATGTGTTATTATTGTAGCACTA
EX904399       --> ..................................................
EX756209       --> ..................................................

               1196   -   1246
UN19722        --> TATATACCATGTGATATATAGATTTGAGGTCCTAACTTTAGGTGTTGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- ..................................................
EX768317       <-- TATATACCATGTGATATATAGATTTGAGGTCCTAACTTTAGGTGTTGTTT
FD936707       <-- TATATACCATGTGATATATAGATTTGAGGTCCTAACTTTAGGTGTTGTTT
EX750891       <-- TATATACCATGTGATATATAGATTTGAGGTCCTAACTTTAGGTGTTGTTT
FD967868       <-- TATATACCATGTGATATATAGATTTGAGGTCCT.................
FD975909       <-- TATATACCATGTGATATATAGATTTGAGGTCCTAACTTTAGGTGTTGTTT
FD983516       <-- TATATACCATGTGATATATAGATTTGAGGTCCTAACTTTAGGTGTTGTTT
EV542621       <-- TATATACCATGTGATATATAGATTTGAGGTCCTAACTTTAGGTGTTGTTT
FD961753       <-- TATATACCATGTGATATATAGATTTGAGGTCCTAACTTTAGGTGTTGTTT
FD968338       <-- TATATACCATGTGATATATAGATTTGAGGTCCTAACTTTAGGTGTTGTTT
EV552020       --> ..................................................
EW734872       --> ..................................................
EX746497       --> ..................................................
EX748310       --> ..................................................
EX764386       --> ..................................................
EX890515       --> ..................................................
FD987461       --> ..................................................
EV538664       --> ..................................................
FD972446       --> ..................................................
EX763717       --> ..................................................
EY908464       --> ..................................................
FD549576       --> ..................................................
FY428285       --> ..................................................
FY438809       --> ..................................................
FY448460       --> ..................................................
FY452893       --> ..................................................
EV568358       --> ..................................................
FD979940       --> ..................................................
FD940952       --> TATATACCATGTGATATATAGATTTGAG-TCCTAACTTTAG-TGTTGTTT
EX904399       --> ..................................................
EX756209       --> ..................................................

               1246   -   1296
UN19722        --> CTTGTACAAAAGTAGTTGTTTGTGTGTGTGATTGTGCCTTATCTTTAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- ..................................................
EX768317       <-- CTTGTgc...........................................
FD936707       <-- CTTGTACAAAAGTAGTTGTTTGTGTGTGTGATTGTGCCTTATCTTTAATA
EX750891       <-- CTTGTACAAAAGTAGTTGTTTGTGTGTGTGATTGTGCCTTATCTTTAATA
FD967868       <-- ..................................................
FD975909       <-- CTTGTACAAAAGTAGTTGTTTGTGTGTGTGATTGTGCCTTATCTTTAATA
FD983516       <-- CTTGTACAAAAGTAGTTGTTTGTGTGTGTGATTGTGCCTTATCTTTAATA
EV542621       <-- TTTGTACAAAAGTAGTTGTTTGTGTGTGTGATTGTGCCGTATTTTTAATA
FD961753       <-- CTTGTACAAAAGTAGTTGTTTGTGTGTGTGATTGTGCCTTATCTTTAATA
FD968338       <-- CTTGTACAAAAGTAGTTGTTTGTGTGTGTGATTGTGCCTTATCTTTAATA
EV552020       --> ..................................................
EW734872       --> ..................................................
EX746497       --> ..................................................
EX748310       --> ..................................................
EX764386       --> ..................................................
EX890515       --> ..................................................
FD987461       --> ..................................................
EV538664       --> ..................................................
FD972446       --> ..................................................
EX763717       --> ..................................................
EY908464       --> ..................................................
FD549576       --> ..................................................
FY428285       --> ..................................................
FY438809       --> ..................................................
FY448460       --> ..................................................
FY452893       --> ..................................................
EV568358       --> ..................................................
FD979940       --> ..................................................
FD940952       --> CTTGTACAAA-GTAGTTGTTTGTGTGTGTGATTGTGC-TTATCTTTA-TA
EX904399       --> ..................................................
EX756209       --> ..................................................

               1296   -   1346
UN19722        --> TATATGTGTGTGTATTTGGTTTATTTTGTTTAATCTGGTTTTTGAGGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- ..................................................
EX768317       <-- ..................................................
FD936707       <-- TATAT-T-TGTGTATTTGGTTT............................
EX750891       <-- TATAT-T-TGTGTATTTGGTT.............................
FD967868       <-- ..................................................
FD975909       <-- TATATGTGTGTGTATTTGGTTTATTTTGTTTAATCTGGTTTTTGAGGATA
FD983516       <-- TATAT-T-TGTGTATTTGGTTTATTTTGTTTAcc................
EV542621       <-- TATATGTGTGTGTATTTGGTTT............................
FD961753       <-- TATATTTGT.........................................
FD968338       <-- TATATGTGTGTGTATTTGGTTTATTTTGTTTAATCTGGTTTTTGAGGATA
EV552020       --> ..................................................
EW734872       --> ..................................................
EX746497       --> ..................................................
EX748310       --> ..................................................
EX764386       --> ..................................................
EX890515       --> ..................................................
FD987461       --> ..................................................
EV538664       --> ..................................................
FD972446       --> ..................................................
EX763717       --> ..................................................
EY908464       --> ..................................................
FD549576       --> ..................................................
FY428285       --> ..................................................
FY438809       --> ..................................................
FY448460       --> ..................................................
FY452893       --> ..................................................
EV568358       --> ..................................................
FD979940       --> ..................................................
FD940952       --> TAT...............................................
EX904399       --> ..................................................
EX756209       --> ..................................................

               1346   -   1396
UN19722        --> ATAGTTTGTGGGATATGGGGAATATTGTAAAGAAGAGAGACAGAGCATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- ..................................................
EX768317       <-- ..................................................
FD936707       <-- ..................................................
EX750891       <-- ..................................................
FD967868       <-- ..................................................
FD975909       <-- ATAGTTTGTGGGATATGGGGAATATTGTAAAGAAGAGAGACAGAGCATGT
FD983516       <-- ..................................................
EV542621       <-- ..................................................
FD961753       <-- ..................................................
FD968338       <-- ATAGTTTGTGGGATATGGGGAATATTGTAAAGAAGAGAGACAGAGCATGT
EV552020       --> ..................................................
EW734872       --> ..................................................
EX746497       --> ..................................................
EX748310       --> ..................................................
EX764386       --> ..................................................
EX890515       --> ..................................................
FD987461       --> ..................................................
EV538664       --> ..................................................
FD972446       --> ..................................................
EX763717       --> ..................................................
EY908464       --> ..................................................
FD549576       --> ..................................................
FY428285       --> ..................................................
FY438809       --> ..................................................
FY448460       --> ..................................................
FY452893       --> ..................................................
EV568358       --> ..................................................
FD979940       --> ..................................................
FD940952       --> ..................................................
EX904399       --> ..................................................
EX756209       --> ..................................................

               1396   -   1446
UN19722        --> GCATTAGTTGGGAGGCAGTGTCATCTGTTAGATTCTCAATGGACTTTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- ..................................................
EX768317       <-- ..................................................
FD936707       <-- ..................................................
EX750891       <-- ..................................................
FD967868       <-- ..................................................
FD975909       <-- GCATTAGTTGGGAGGCAGTGTCATCTGTTAGATTCTCAATGGACTTTTTA
FD983516       <-- ..................................................
EV542621       <-- ..................................................
FD961753       <-- ..................................................
FD968338       <-- GCATTAGTTGGGAGGCAGTGTCATCTGTTAGATTCTCAATGGACTTTTTA
EV552020       --> ..................................................
EW734872       --> ..................................................
EX746497       --> ..................................................
EX748310       --> ..................................................
EX764386       --> ..................................................
EX890515       --> ..................................................
FD987461       --> ..................................................
EV538664       --> ..................................................
FD972446       --> ..................................................
EX763717       --> ..................................................
EY908464       --> ..................................................
FD549576       --> ..................................................
FY428285       --> ..................................................
FY438809       --> ..................................................
FY448460       --> ..................................................
FY452893       --> ..................................................
EV568358       --> ..................................................
FD979940       --> ..................................................
FD940952       --> ..................................................
EX904399       --> ..................................................
EX756209       --> ..................................................

               1446   -   1496
UN19722        --> TACTTTATTCTCTTTTTATGAAAATTTCTCTTTAGCGTTCGAGTTGGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- ..................................................
EX768317       <-- ..................................................
FD936707       <-- ..................................................
EX750891       <-- ..................................................
FD967868       <-- ..................................................
FD975909       <-- TACTTT............................................
FD983516       <-- ..................................................
EV542621       <-- ..................................................
FD961753       <-- ..................................................
FD968338       <-- TACTTTATTCTCTTTTTATGAAAATTTCTCTTTAGCGTTCGAGTTGGAAG
EV552020       --> ..................................................
EW734872       --> ..................................................
EX746497       --> ..................................................
EX748310       --> ..................................................
EX764386       --> ..................................................
EX890515       --> ..................................................
FD987461       --> ..................................................
EV538664       --> ..................................................
FD972446       --> ..................................................
EX763717       --> ..................................................
EY908464       --> ..................................................
FD549576       --> ..................................................
FY428285       --> ..................................................
FY438809       --> ..................................................
FY448460       --> ..................................................
FY452893       --> ..................................................
EV568358       --> ..................................................
FD979940       --> ..................................................
FD940952       --> ..................................................
EX904399       --> ..................................................
EX756209       --> ..................................................

               1496   -   1546
UN19722        --> ATAATATGAAAAGAAGCTTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~
EY904153       <-- .......................
EX768317       <-- .......................
FD936707       <-- .......................
EX750891       <-- .......................
FD967868       <-- .......................
FD975909       <-- .......................
FD983516       <-- .......................
EV542621       <-- .......................
FD961753       <-- .......................
FD968338       <-- ATAATATGAAAAGAAGCTTTGTT
EV552020       --> .......................
EW734872       --> .......................
EX746497       --> .......................
EX748310       --> .......................
EX764386       --> .......................
EX890515       --> .......................
FD987461       --> .......................
EV538664       --> .......................
FD972446       --> .......................
EX763717       --> .......................
EY908464       --> .......................
FD549576       --> .......................
FY428285       --> .......................
FY438809       --> .......................
FY448460       --> .......................
FY452893       --> .......................
EV568358       --> .......................
FD979940       --> .......................
FD940952       --> .......................
EX904399       --> .......................
EX756209       --> .......................