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Alignment for radish unigene UN19747

               -1     -     49
UN19747        --> ..GGGCATTCAAAGAAAGAAGGGGTAATCGGCACTAACACAGGAGGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- ..................................................
FD545954       <-- ..................................................
FD967829       <-- ..................................................
FD558153       --> ..GGGCATTCAAAGAAAGAAGGGGTAATCGGCACTAACACAGGAGGAGAT
FD949278       --> ..GGGCATTCAAAGAAAGAAGGGGTAATCGGCACTAACACAGGAGGAGAT
FD965430       --> ..GGGCATTCAAAGAAAGAAGGGGTAATCGGCACTAACACAGGAGGAGAT
EY923664       --> ggtcGCATTCAAAGAAAGAAGGGGTAATCGGCACTAACACAGGAGGAGAT
EX770165       --> ....ggATTCAAAGAAAGAAGGGGTAATCGGCACTAACACAGGAGGAGAT
FD535928       --> ....ggATTCAAAGAAAGAAGGGGTAATCGGCACTAACACAGGAGGAGAT
FD549946       --> .....aggggAAAGAAAGAAGGGGTAATCGGCACTAACACAGGAGGAGAT
FD940055       --> ..................................................
FD971803       --> ..................................................

               49     -     99
UN19747        --> TACATCGAGGGAGATACCATTTTCCTCC-ACGTCGGAGGTTTGGTACTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- ..................................................
FD545954       <-- ..................................................
FD967829       <-- ..................................................
FD558153       --> TACATCAAGGGAGATACCATTTTCCTCC-ACGTCGGAGGTTTGGTACTAC
FD949278       --> TACATCGAGGGAGATACCATTTTCCTCC-ACGTCGGAGGTTTGGTACTAC
FD965430       --> TACATCGAGGGAGATACCATTTTCCTCC-ACGTCGGAGGTTTGGTACTAC
EY923664       --> TACATCGAGGGAGATACCATTTTCCTCCCACGTCGGAGGTTTGGTACTAC
EX770165       --> TACATCGAGGGAGATACCATTTTCCTCCCACGTCGGAGGTTTGGTACTAC
FD535928       --> TACATCGAGGGAGATACCATTTTCCTCC-ACGTCGGAGGTTTGGTACTAC
FD549946       --> TACATCGAGGGAGATCCCATTTTCCTCC-ACGTCGGAGGTTTGGTACTAC
FD940055       --> ..................................................
FD971803       --> ..................................................

               99     -    149
UN19747        --> ACGTCTCCTAAGTTTGTCCTGTCAGAATGGAAGGTTCAAGCAGTCTATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- ..................................................
FD545954       <-- ..................................................
FD967829       <-- ..................................................
FD558153       --> ACGTCTCCTAAGTTTGTCCTGTCAGAATGGAAGGTTCAAGCAGTCTATCC
FD949278       --> ACGTCTCCTAAGTTTGTCCTGTCAGAATGGAAGGTTCAAGCAGTCTATCC
FD965430       --> ACGTCTCCTAAGTTTGTCCTGTCAGAATGGAAGGTTCAAGCAGTCTATCC
EY923664       --> ACGTCTCCTAAGTTTGTCCTGTCAGAATGGAAGGTTCAAGCAGTCTATCC
EX770165       --> ACGTCTCCTAAGTTTGTCCTGTCAGAATAGAAGGTTCGAGCAGTCTATCC
FD535928       --> ACGTCTCCTAAGTTTGTCCTGTCAGAATGGAAGGTTCAAGCAGTCTATCC
FD549946       --> ACGTCTCCCAAGTTTGTCCTGTCAGAATGGAAGGTTCAAGCAGTCTATCC
FD940055       --> ..................................................
FD971803       --> ..................................................

               149    -    199
UN19747        --> AACGCAGGAAATTTTGGATCTATTGGAAGACAATCACAAGCTTCCCCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- ..................................................
FD545954       <-- ..................................................
FD967829       <-- ..................................................
FD558153       --> AACGCAGGAAATTTTGGATCTATTGGAAGACAATCACAAGCTTCCCCAAA
FD949278       --> AACGCAGGAAATTTTGGATCTATTGGAAGACAATCACAAGCTTCCCCAAA
FD965430       --> AACGCAGGAAATTTTGGATCTATTGGAAGACAATCACAAGCTTCCCCAAA
EY923664       --> AACGCAGGAAATTTTGGATCTATTGGAAGACAATCACAAGCTTCCCCAAA
EX770165       --> AACGCAGGAAATTTTGGATCTATTGGAAGACAATCACAAGCTTCCCCAAA
FD535928       --> AACGCAGGAAATTTTGGATCTATTGGAAGACAATCACAAGCTTCCCCAAA
FD549946       --> AACACAGGAAATTTTGGATCTATTGGAAGACAATCACAAGCTTCCCCAAA
FD940055       --> ..............gGGATCTATTGGAAGACAATCACAAGCTTCCCCAAA
FD971803       --> ..................................................

               199    -    249
UN19747        --> TAACAGGGATAATAGTATTTCTCCTCCAAGTAATATGCACCATCATCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- ..................................................
FD545954       <-- ..................................................
FD967829       <-- ..................................................
FD558153       --> TAACAGGGATAATAGTATTTCTCCTCCAAGTAATATGCACCATCATCATA
FD949278       --> TAACAGGGATAATAGTATTTCTCCTCCAAGTAATATGCACCATCATCATA
FD965430       --> TAACAGGGATAATAGTATTTCTCCTCCAAGTAATATGCACCATCATCATA
EY923664       --> TAACAGGGATAATAGTATTTCTCCTCCAAGTAATATGCACCATCATCATA
EX770165       --> TAACAGGGATAATAGTATTTCTCCTCCAAGTAATATGCACCATCATCATA
FD535928       --> TAACAGGGATAATAGTATTTCTCCTCCAAGTAATATGCACCATCATCATA
FD549946       --> TAACAGGGATAATAGTATTTCTCCTCCAAGTAATATGCACCATCAT---A
FD940055       --> TAACAGGGATAATAGTATTTCTCCTCCAAGTAATATGCACCATCATCATA
FD971803       --> ..................................................

               249    -    299
UN19747        --> GTGCTTCTTTAAATAATCTTCTCATAGATGAGCAACCAGCTTGGCTCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- ..................................................
FD545954       <-- ..................................................
FD967829       <-- ..................................................
FD558153       --> GTGCTTCTTTAAATAATCTTCTCATAGATGAGCAACCAGCTTGGCTCGAT
FD949278       --> GTGCTTCTTTAAATAATCTTCTCATAGATGAGCAACCAGCTTGGCTCGAT
FD965430       --> GTGCTTCTTTAAATAATCTTCTCATAGATGAGCAACCAGCTTGGCTCGAT
EY923664       --> GTGCTTCTTTAAATAATCTTCTCATAGATGAGCAACCAGCTTGGCTCGAT
EX770165       --> GTGCTTCTTTAAATAATCTTCTCATAGATGAGCAACCAGCTTGGCTCGAT
FD535928       --> GTGCTTCTTTAAATAATCTTCTCATAGATGAGCAACCAGCTTGGCTCGAT
FD549946       --> GTGCTTCTTTAAATAATCTTCTCATAGATGAGCAACCAGCTTGGCTCGAT
FD940055       --> GTGCTTCTTTAAATAATCTTCTCATAGATGAGCAACCAGCTTGGCTCGAT
FD971803       --> ..................................................

               299    -    349
UN19747        --> GATCTCCTAAGCGAGCCAGCGTCTCCCAAGATCAACAAAGGTCACAGGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- ...CTCCTAAGCGAGCCAGCGTCTCCCAAGATCAACAAAGGTCACAGGCG
FD545954       <-- ..................................................
FD967829       <-- ..................................................
FD558153       --> GATCTCCTAAGCGAGCCAGCGTCTCCCAAGATCAACAAAGGTCACAGGCG
FD949278       --> GATCTCCTAAGCGAGCCAGCGTCTCCCAAGATCAACAAAGGTCACAGGCG
FD965430       --> GATCTCCTAAGCGATCCAGCGTCTCCCAAGATCAACAAAGGTCACAGGCG
EY923664       --> GATCTCCTAAGCGAGCCAGCGTCTCCCAAGATCAACAAAGGTCACAGGCG
EX770165       --> GATCTCCTAAGCGAGCCAGCGTCTCCCAAGATCAACAAAGGTCACAGGCG
FD535928       --> GATCTCCTAAGCGAGCCAGCGTCTCCCAAGATCAACAAAGGTCACAGGCG
FD549946       --> GATCTCCTAAGCGAGCCAGCGTCTCCCAAGATCAACAAAGGTCACAAGCG
FD940055       --> GATCTCCTAAGCGAGCCAGCGTCTCCCAAGATCAACAAAGGTCACAGGCG
FD971803       --> ..................................................

               349    -    399
UN19747        --> TTCAGCTAGTGACACATCTGCCTACTTAAACTCGTCTTTAATGCCTTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- TTCAGCTAGTGACACATCTGCCTACTTAAACTCGTCTTTAATGCCTTTTA
FD545954       <-- ..................................................
FD967829       <-- ..................................................
FD558153       --> TTCAGCTAGTGACACATCTGCCTACTTAAACTCGTCTTTAATGCCTTTTA
FD949278       --> TTCAGCTAGTGACACATCTGCCTACTTAAACTCGTCTTTAATGCCTTTTA
FD965430       --> TTCAGCTAGTGACACATCTGCCTACTTAAACTCGTCTTTAATGCCTTTTA
EY923664       --> TTCAGCTAGTGACACATCTGCCTACTTAAACTCGTCTTTAATGCCTTTTA
EX770165       --> TTCAGCTAGTGACACATCTGCCTACTTAAACTCGTCTTTAATGCCTTTTA
FD535928       --> TTCAGCTAGTGACACATCTGCCTACTTAAACTCGTCTTTAATGCCTTTTA
FD549946       --> TTCAGTTAGTGACACATCTGCCTACTTAAACTCGTCTTTAATGCCTTTTA
FD940055       --> TTCAGCTAGTGACACATCTGCCTACTTAAACTCGTCTTTAATGCCTTTTA
FD971803       --> ..................................................

               399    -    449
UN19747        --> GAGAAGATGACCTTCTGAATAGTCATTTTTCTGGGCCATCTTGGCTAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- GAGAAGATGACCTTCTGAGTAGTCATTTTTCTGGGCCATCTTGGCTAGTC
FD545954       <-- ..................................................
FD967829       <-- ..................................................
FD558153       --> GAGAAGATGACCTTCTGAATAGTCATTTTTCTGGGCCATCTTGGCTAGTC
FD949278       --> GAGAA.............................................
FD965430       --> GAGAAGATGACCTTCTGAATAGTCATCTTTCTGGGCCATCTTGGCTAGTC
EY923664       --> GAGAAGATGACCTTCTGAATAGTCATTTTTCTGGGCCATCTTGGCTAGTC
EX770165       --> GAGAAGATGACCTTCTGAATAGTCATTTTTCTGGGCCATCCTGGCTAGTC
FD535928       --> GAGAAGATGACCTTCTGAATAGTCATTTTTCTGGGCCATCTTGGCTAGTC
FD549946       --> GAGAAGATGACCTTCTGAATAGTCATTTTTCTGCGCCATCTTGGCTAGTC
FD940055       --> GAGAAGATGACCTTCTGAATAGTCATTTTTCTGGGCCATCTTGGCTAGTC
FD971803       --> ..................................................

               449    -    499
UN19747        --> CAGAATATTCACCAGCATGATGATTTGTGGCATCCTAACTCTTACGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- CAGAATATTCACCAGCATGATGATTTGTGGCATCCTAACCCTTACGACAA
FD545954       <-- ..................................................
FD967829       <-- ..................................................
FD558153       --> CAGAATATTCACCAGCATGATGATTTGTGGCATCCTAACTCTTACGACAA
FD949278       --> ..................................................
FD965430       --> CAGAATATTCACCAGCATGATGATTTGTGGCATCCTAACTCTTACGACAA
EY923664       --> CAGAATATTCACCAGCATGATGATTTGTGGCATCCTAACTCTTACGACAA
EX770165       --> CAGAATATTCACCAGCATGATGATTTGTGGCATCCTAACTCTTACGACAA
FD535928       --> CAGAATATTCACCAACATGATGATTTGTGGCATCCTAACTCTTACGACAA
FD549946       --> CAGAATATTAACCAGCATGATGATTTGTGGCATCCTAACTCTTACGACAA
FD940055       --> CAGAATATTAACCAGCATGATGATTTGTGGCATCCTAACTCTTACGACAA
FD971803       --> ..................................................

               499    -    549
UN19747        --> CCACAGTAAATTGGG-ATGGGAGTTTTCTAACAAAACTGGAACTAACCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- CCACAGTAAATTGGG-ATGGGAGTTTTCTAACAAAACTGGAACTAACCTC
FD545954       <-- ..................................................
FD967829       <-- ..................................................
FD558153       --> CCACAGTAAATTGGG-ATGGGAGTTTTCTAACAAAACTGGAACTAACCTC
FD949278       --> ..................................................
FD965430       --> CCACAGTAAATTGGG-ATGGGAGTTTTCTAACAAAACTGGAACTAACCTC
EY923664       --> CCACAGTAAATTGGGGATGGGAGTTTTCTAACAAAACTGGAACTAACCTC
EX770165       --> CCACAGTAAATTGGG-ATGGGAGTTTTCTAACAAAACTGGAACTAACCTC
FD535928       --> CCACAGTAAATTGGG-ATGGGAGTTTTCTAACAAAACTGGAACTAACCTC
FD549946       --> CCACAGTAAATTGGG-ATGGGAGTTTTCTAACAAAACTGAAACTAACCTC
FD940055       --> CCACAGTAAATTGGG-ATGGGAGTTTTCTAACAAAACTGGAACTAACCTC
FD971803       --> ..................................................

               549    -    599
UN19747        --> CAAACACATGTGTCATGGGGAGCTGTAAATAGAGCAGGTACCTCTGCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- CAAACACATGTGTCATGGGGAGCTGTAAATAGAGCAGGTACCTCTGCCTC
FD545954       <-- .....................GCTGTAAATAGAGCAGGTACCTCTGCCTC
FD967829       <-- ..................................................
FD558153       --> CAAACACATGTGTCATGGGGAGCTGTAAATAGAGCATGTACCTCTGCCTC
FD949278       --> ..................................................
FD965430       --> CAAACACATGTGTCATGGGGAGCTGTAAATAGAGCATGTACCTCTGCCTC
EY923664       --> CAAACACATGTGTCATGGGGAGCTGTAAATAGA.................
EX770165       --> CAAACACATGTGTCATGGGGAGCTGTAAATAGAGCAGGTACCTCTGCCTC
FD535928       --> CAAACACATGTGTCATGGGGAGCTGTAAATAGAGCATGTACCTCTGCCTC
FD549946       --> CAAACACATGTGTCATGGGGAGCTGTAAATAGAGCAGGTACCTCTGCCTC
FD940055       --> CAAACACATGCGTCATGGGGAGCTGTAAATAGAGCAGGTACCTCTGCCTC
FD971803       --> .............................gAGAGCAGGTACCGCTGCCTC

               599    -    649
UN19747        --> GAAATCAGCTGAAATACAAGCAAGTAAAATGAAAGAAGGCTCTTTAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- GAAATCAGCTGAAATACAAGCAAGTAAAATGAAAGAAGGCTCTTTAACAA
FD545954       <-- GAAATCAGCTGAAATACAAGCAAGTAAAATGAAAGAAGGCTCTTTAACAA
FD967829       <-- ..................................................
FD558153       --> GAAATCAGCTGAAATACAAGTAAGTAAAATGAAAGAAGGCTCTTTAACAA
FD949278       --> ..................................................
FD965430       --> GAAATCAGCTGAAATACAAGCAAGTAAAATGAAAGAAGGCTCTTTAACAA
EY923664       --> ..................................................
EX770165       --> GAAATCAGCTGAAATACAAGCAAGTAAAATGAAAG...............
FD535928       --> GAAATCAGCTGAAATACAAGCAAGTAAAATGAAAGAAGGCTCTTTAACAA
FD549946       --> GAAATCAGCTGAAATACAAGCAAGTAAAATGAAAGAAGGCTCTTTAACAA
FD940055       --> GAAATCAGCTGAAATACAAGCAAGTAAAATGAAAGAAGGCTCTTTAACAA
FD971803       --> GAAATCAGCTGAAATACAAGCAAGTAAAATGAAAGAAGGCTCTTTAACAA

               649    -    699
UN19747        --> AACCAGACGGTCCTGGATCAAAAATTGACTCTAAACGTATCAAACACCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- AACCAGACGGTCCTGGATCAAAAATTGACTCTAAACGTATCAAACACC..  Raphanus sativus cv Early Scarlet Globe
FD545954       <-- AACCAGATGGTCCTGGATCAAAAACTGACTCTAAACGTATCAAACACCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD967829       <-- ................ATCAAAAACTGACTCTAAACGTATCAAACACCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558153       --> AACCAGACG-TCCTGGATCAAAA-TTGACTCTAAACGTATCAAACACCAA  Raphanus raphanistrum subsp. landra
FD949278       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD965430       --> AGCCAGACGGTCCTGGATCAAAAATTGACTCTAAACGTATCAAACACCAA  Raphanus raphanistrum subsp. maritimus
EY923664       --> ..................................................  Raphanus raphanistrum subsp. landra
EX770165       --> ..................................................  Raphanus raphanistrum subsp. landra
FD535928       --> A-CCAGACGGTCCTGGATCAAAAATTGACTCTAAACGTATCAAACACCAA  Raphanus raphanistrum subsp. maritimus
FD549946       --> AACCAGATGGTCCTGGATCAAAAACTGACTCTAAACGTATCAAACACCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940055       --> AACCAGACGGTCCTGGATCAAAAATTGACTCTAAACGCATCAAACACCAA  Raphanus sativus var. oleiformis
FD971803       --> AACCAGACGGTCCTGGATCAAAAACTGACTCTAAACGTATCAAACACCAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               699    -    749
UN19747        --> AATGCTCACCGGGCACGTTTAAGGAGGCTTGAGTACATATCAGATTTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- ..................................................
FD545954       <-- AATGCTCACCGGGCACGTTTAAGGAGGCTTGAGTACATATCAGATTTGGA
FD967829       <-- AATGCTCACCGGGCACGTTTAAGGAGGCTTGAGTACATATCAGATTTGGA
FD558153       --> A-TGCTCAC.........................................
FD949278       --> ..................................................
FD965430       --> AATGCTCACCGGGCACGTTTAAG-A-GCTTGAGTACATATCAGATCTGGA
EY923664       --> ..................................................
EX770165       --> ..................................................
FD535928       --> AATGCTCACCGGGCACGTTTAAGa..........................
FD549946       --> AATGCTCACCGGGCACGTTTAAG-A-GCTTGAGTACATATCAGATTTGGA
FD940055       --> AATGCTCACCGGGCACGTTTAAGGAGGCTTGAGTACATATCAGATTTGGA
FD971803       --> AATGCTCACCGGGCACGTTTAAGGAGGCTTGAGTACATATCAGATTTGGA

               749    -    799
UN19747        --> AAGAACCATCCAAGTGCTACAAGCTCAAGGATGTGAAATGTCATCTGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- ..................................................
FD545954       <-- AAGAACCATCCAAGTGCTACAAGCTCAAGGATGTGAAATGTCATCTGCCA
FD967829       <-- AAGAACCATCCAAGTGCTACAAGCTCAAGGATGTGAAATGTCATCTGCCA
FD558153       --> ..................................................
FD949278       --> ..................................................
FD965430       --> A-G-ACCAT-CAAGTGCTACA-GCTCAAGGATGTGAA-TGTCATCTGC-A
EY923664       --> ..................................................
EX770165       --> ..................................................
FD535928       --> ..................................................
FD549946       --> AAGA-CCATCCAAGTGCTACA-GCTCA-GGATGTGAA-TGTCATCTGC-A
FD940055       --> AAGAACCATCCAAGTGCTACAAGCTCAAG-ATGTGAAATGTCATCTGCCA
FD971803       --> AAGAACCATCCAAGTGCTACAAGCTCAAGGATGTGAAATGTCATCTGCCA

               799    -    849
UN19747        --> TTCACTACTTGGATCAACAGCTGGTCATGCTTGGTATGGAAAATAGAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- ..................................................
FD545954       <-- TCCACTACTTGGATCAACAGCTGGTCATGCTTGGTATGGAAAATAGAGCC
FD967829       <-- TTCACTACTTGGATCAACAGCTGGTCATGCTTGGTATGGAAAATAGAGCC
FD558153       --> ..................................................
FD949278       --> ..................................................
FD965430       --> -TCACTATTTGGATCAACAGCTGGTCATG.....................
EY923664       --> ..................................................
EX770165       --> ..................................................
FD535928       --> ..................................................
FD549946       --> TCCACTACT-GGATCA-CAGCT............................
FD940055       --> TTCACTATTTGGATCAACAGCTGGTCATGCTTGGTATGGAAA-TAGAGCC
FD971803       --> TTCACTACTTGGATCAACAGCTGGTCATGCTTGGTATGGAAAATAGAGCC

               849    -    899
UN19747        --> TTGAAACAACGTCTGGATAGTTTAGCAGAAATCCAAAAACTTAAACATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- ..................................................
FD545954       <-- TTGAAACAACGTCTGGATAGTTTAGCAGAAATCCAAAAATTTAAACATGT
FD967829       <-- TTGAAACAACGTCTGGATAGTTTAGCAGAAATCCAAAAACTTAAACATGT
FD558153       --> ..................................................
FD949278       --> ..................................................
FD965430       --> ..................................................
EY923664       --> ..................................................
EX770165       --> ..................................................
FD535928       --> ..................................................
FD549946       --> ..................................................
FD940055       --> TTGAAACAACGTCTGGATAGTTTAGCAGAAATCCAAAA-CTTAAACATGT
FD971803       --> TTGAAACAACGTCTGGATAGTTTAGCAGAAATCCAAAAACTTAAACATGT

               899    -    949
UN19747        --> TGAGCAACAATTCCTTGAAAGAGAGATAGGAAATCTGAAATTTCGAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- ..................................................
FD545954       <-- TGAGCAACAATTCCTTGAAAGAGAGATAGGAAATCTGAAGTTTCGAAAGC
FD967829       <-- TGAGCAACAATTCCTTGAAAGAGAGATAGGAAATTTGAAATTTCGAAAGC
FD558153       --> ..................................................
FD949278       --> ..................................................
FD965430       --> ..................................................
EY923664       --> ..................................................
EX770165       --> ..................................................
FD535928       --> ..................................................
FD549946       --> ..................................................
FD940055       --> TGAGCA............................................
FD971803       --> TGAGCAACAATTCCTTGAAAGAGAGATAGGAAATCTGAAATTTCGAAAGC

               949    -    999
UN19747        --> ACCAACAACAACCACAAC------AGAATCAGAAACAAACGCAGCAAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- ..................................................
FD545954       <-- ACCAACAACAACCACAACCACAACAGAATCAGAAACAAACGCAGCAAAAC
FD967829       <-- ACCAACAACAACCACAAC------AGAATCAGAAACAAACGCAGCAAAAC
FD558153       --> ..................................................
FD949278       --> ..................................................
FD965430       --> ..................................................
EY923664       --> ..................................................
EX770165       --> ..................................................
FD535928       --> ..................................................
FD549946       --> ..................................................
FD940055       --> ..................................................
FD971803       --> ACCAACAACAACCACAAC------AGAATCAGAAACAAACGCAGCAAAAC

               999    -   1049
UN19747        --> AGATACAACAACTACCGCCCACCCACCACGCAGGAACCCGAGTCCCAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- ..................................................
FD545954       <-- AGATACAACAACTACCGCCCACCCACCACGCAGGAACCCGAGTCCCAGTT
FD967829       <-- AGATACAACAACTACCGCCCACCCACCACGCAGGAACCCGAGTCCCAGTT
FD558153       --> ..................................................
FD949278       --> ..................................................
FD965430       --> ..................................................
EY923664       --> ..................................................
EX770165       --> ..................................................
FD535928       --> ..................................................
FD549946       --> ..................................................
FD940055       --> ..................................................
FD971803       --> AGATACAACAACTACCGCCCACCCACCACGCAGGAACCCGAGTCCCAGTT

               1049   -   1099
UN19747        --> TGCAGCCTTGGCGATATGATTTTAGGAAAATATGGATCCACTTCCAGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- ..................................................
FD545954       <-- TGCAGCCTTGGCGATATGATTTTAGGAAAATATGGATCCACTTCCAGTTA
FD967829       <-- TGCAGCCTTGGCGATATGATTTTAGGAAAATATGGATCCACTTCCAGTTA
FD558153       --> ..................................................
FD949278       --> ..................................................
FD965430       --> ..................................................
EY923664       --> ..................................................
EX770165       --> ..................................................
FD535928       --> ..................................................
FD549946       --> ..................................................
FD940055       --> ..................................................
FD971803       --> TGCAGCCTTGGCGATATGATTTTAGGAAAATATGGATCCACTTCCAGTTA

               1099   -   1149
UN19747        --> AATTTCTCAGTATGCTCTATAAGGTCTTATAAACATTTTTCTCAGTGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- ..................................................
FD545954       <-- AATTTCTCAGTATGCTCTATAAGGTCTTATAAACCTTTTTCTCAGTGTTC
FD967829       <-- AATTTCTCAGTATGCTCTATAAGGTTTTATAAACATTTTTTTCAGTGTTC
FD558153       --> ..................................................
FD949278       --> ..................................................
FD965430       --> ..................................................
EY923664       --> ..................................................
EX770165       --> ..................................................
FD535928       --> ..................................................
FD549946       --> ..................................................
FD940055       --> ..................................................
FD971803       --> AATTTCTCAGTATGCTCTATAAGGTCTTATAAACATTTTTCTCAGTGTTC

               1149   -   1199
UN19747        --> ATATACGATAGGTAAGCCCAGTAATGCTTGCAGTCTGGAATGAATGCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- ..................................................
FD545954       <-- ATATACGATATGTAAGCCTAGTAATGCTCGCAGTCTGGAATGAATGCCTG
FD967829       <-- ATATACGATAGGTAAGCCCAGTAATGCTTGCAGTTTGGAATGAATGCCTG
FD558153       --> ..................................................
FD949278       --> ..................................................
FD965430       --> ..................................................
EY923664       --> ..................................................
EX770165       --> ..................................................
FD535928       --> ..................................................
FD549946       --> ..................................................
FD940055       --> ..................................................
FD971803       --> ATATACGATAGGTAAGCCCAGTAATGCTTGCAGTCTGGAATGAATGC...

               1199   -   1249
UN19747        --> AGCAAAGTATAGTCACATATTTTATAATGTGGATGTTCAAATTCTTATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- ..................................................
FD545954       <-- AGCAAAGTATAGTCACATATTTTATAATGTGGATGTTCAAATTCTTATTT
FD967829       <-- AGCAAAGTATAGTCACATATATTATAATGTGGATGTTCAAATTCTTATTT
FD558153       --> ..................................................
FD949278       --> ..................................................
FD965430       --> ..................................................
EY923664       --> ..................................................
EX770165       --> ..................................................
FD535928       --> ..................................................
FD549946       --> ..................................................
FD940055       --> ..................................................
FD971803       --> ..................................................

               1249   -   1299
UN19747        --> TT-ATATAATTATTTTTATTAAAGTTGTGTAAGAGTCTATGAAACAACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- ..................................................
FD545954       <-- TTTATATAATTATTTTTATTAAAGTTGTGTAAGAGTCTATGAAACAACTC
FD967829       <-- TT-ATATAATTATTTTTATTAAAGTTGTGTAAGAGTCTATGAAACAACTC
FD558153       --> ..................................................
FD949278       --> ..................................................
FD965430       --> ..................................................
EY923664       --> ..................................................
EX770165       --> ..................................................
FD535928       --> ..................................................
FD549946       --> ..................................................
FD940055       --> ..................................................
FD971803       --> ..................................................

               1299   -   1349
UN19747        --> TATCATGTTAATTATCTTGTAATATATATACTATTAATTTTCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD944942       <-- .............................................
FD545954       <-- TATCATGTTAATTATCTTGTAATATATATACTATTAATTTTCTAC
FD967829       <-- TATCATGTTAATTATCTTGTAATATATATACTATTAATTTTCT..
FD558153       --> .............................................
FD949278       --> .............................................
FD965430       --> .............................................
EY923664       --> .............................................
EX770165       --> .............................................
FD535928       --> .............................................
FD549946       --> .............................................
FD940055       --> .............................................
FD971803       --> .............................................