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Alignment for radish unigene UN19771

               1      -     51
UN19771        --> GGAAAGACAAAAGAGAGCACCAAGGGAAATCGAAACTCTATATAAACGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753754       <-- ..................................................
EV542843       <-- ..................................................
EX768149       <-- ..................................................
EX761240       <-- ..................................................
FD960549       <-- ..................................................
FD959847       <-- ..................................................
FD964588       --> GGAAAGACAAAAGAGAGCACCAAGGGAAATCGAAACTCTATATAAACGTC
EX748388       --> ..................................................
FD535278       --> ..................................................
EV538942       --> ..................................................
EX757725       --> ..................................................
EX764173       --> ..................................................
EY930927       --> ..................................................
FD555995       --> ..................................................
FD963576       --> ..................................................
EX750235       --> ..................................................
EY916127       --> ..................................................

               51     -    101
UN19771        --> AAACCTCACAACTCAAGGATCCACAACACAACAAAACTGCAACGAACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753754       <-- ................GGATCCACAACACAACAAAACTGCAACGAACAAT
EV542843       <-- ....................ggACAACACAACAAAACTGCAACGAACAAT
EX768149       <-- ..................................................
EX761240       <-- ..................................................
FD960549       <-- ..................................................
FD959847       <-- ..................................................
FD964588       --> AAACCTCACAACTCAACGATCCACAACACAACAAAACTGCAACGAACAAT
EX748388       --> ................GGATCCACAACACAACAAAACTGCAACGAACAAT
FD535278       --> ................GGATCCACAACACAACAAAACTGCAACGAACAAT
EV538942       --> ....................ggACAACACAACAAAACTGCAACGAACAAT
EX757725       --> ....................ggACAACACAACAAAACTGCAACGAACAAT
EX764173       --> ....................ggACAACACAACAAAACTGCAACGAACAAT
EY930927       --> ....................ggACAACACAACAAAACTGCAACGAACAAT
FD555995       --> ....................ggACAACACAACAAAACTGCAACGAACAAT
FD963576       --> ....................ggACAACACAACAAAACTGCAACGAACAAT
EX750235       --> ..................................................
EY916127       --> ..................................................

               101    -    151
UN19771        --> GGCGAGCGCAGATCCTGAATCCACCAACAAACCATCGTCCACGGACATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753754       <-- GGCGAGCGCAGATCCTGAATCCACCAACAAACCATCGTCCACGGACATGG
EV542843       <-- GGCGAGCGCAGATCCTGAATCCACCAACAAACCATCGTCCACGGACATGG
EX768149       <-- ..................ATCCACCAACAAACCATCGTCCACGGACATGG
EX761240       <-- .....................CACCAACAAACCATCGTCCACGGACATGG
FD960549       <-- ..................................................
FD959847       <-- ..................................................
FD964588       --> GGTGAGCGCAGATCCTGAATCCACCAACAAACCATCGTCCACGGACATGG
EX748388       --> GGCGAGCGCAGATCCTGAATCCACCAACAAACCATCGTCCACGGACATGG
FD535278       --> GGCGAGCGCAGATCCTGAATCCACCAACAAACCATCGTCCACGGACATGG
EV538942       --> GGCGAGCGCAGATCCTGAATCCACCAACAAACCATCGTCCACGGACATGG
EX757725       --> GGCGAGCGCAGATCCTGAATCCACCAACAAACCATCGTCCACGGACATGG
EX764173       --> GGCGAGCGCAGATCCTGAATCCACCAACAAACCATCGTCCACGGACATGG
EY930927       --> GGCGAGCGCAGATCCTGAATCCACCAACAAACCATCGTCCACCGACATGG
FD555995       --> GGCGAGCGCAGATCCTGAATCCACCAACAAACCATCGTCCACGGACATGG
FD963576       --> GGCGAGCGCAGATCCTGAATCCACCAACAAACCATCGTCCACGGACATGG
EX750235       --> ................GAATCCACCAACAAACCATCGTCCACGGACATGG
EY916127       --> ..................................................

               151    -    201
UN19771        --> ACCTTAAGAAGGTCTTCAACCAGTTCGACGCCAACGGCGACGGTAAGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753754       <-- ACCTTAAGAAGGTCTTCAACCAGTTCGACGCCAACGGCGACGGCAAGATC  Raphanus raphanistrum subsp. maritimus
EV542843       <-- ACCTTAAGAAGGTCTTCAACCAGTTCGACGCCAACGGCGACGGTAAGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768149       <-- ACCTTAAGAAGGTCTTCAACCAGTTCGACGCCAACGGCGACGGTAAGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761240       <-- ACCTTAAGAAGGTCTTCAACCAGTTCGACGCCAACGGCGACGGTAAGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960549       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD959847       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD964588       --> ACCTTAAGAAGGTCTTCAACCAGTTCGACGCCAACGGCGACGGCAAGATC  Raphanus raphanistrum subsp. maritimus
EX748388       --> ACCTTAAGAAGGTCTTCAACCAGTTCGACGCCAACGGCGACGGCAAGATC  Raphanus raphanistrum subsp. maritimus
FD535278       --> ACCTTAAGAAGGTCTTCAACCAGTTCGACGCCAACGGCGACGGCAAGATC  Raphanus raphanistrum subsp. maritimus
EV538942       --> ACCTTAAGAAGGTCTTCAACCAGTTCGACGCCAACGGCGACGGTAAGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757725       --> ACCTTAAGAAGGTCTTCAACCAGTTCGACGCCAACGGCGACGGTAAGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764173       --> ACCTTAAGAAGGTCTTCAACCAGTTCGACGCCAACGGCGACGGTAAGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY930927       --> ACCTTAAGAAGGTCTTCAACCAGTTCGACGCCAACGGCGACGGCAAGATC  Raphanus sativus var. oleiformis
FD555995       --> ACCTTAAGAAGGTCTTCAACCAGTTCGACGCCAACGGCGACGGTAAGATC  Raphanus raphanistrum subsp. landra
FD963576       --> ACCTTAAGAAGGTCTTCAACCAGTTCGACGCCAACGGCGACGGCAAGATC  Raphanus raphanistrum subsp. maritimus
EX750235       --> ACCTTAAGAAGGTCTTCAACCAGTTCGACGCCAACGGCGACGGCAAGATC  Raphanus raphanistrum subsp. maritimus
EY916127       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               201    -    251
UN19771        --> TCTGTCTCTGAGCTCGGCAACGTTTTCAAATCCATGGGAACGTCGTACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753754       <-- TCTGTCTCTGAGCTCGGCAACGTTTTCAAATCCATGGGAACGTCGTACAC
EV542843       <-- TCTGTCTCTGAGCTCGGCAACGTTTTCAAATCCATGGGAACGTCGTACAC
EX768149       <-- TCTGTCTCTGAGCTCGGCAACGTTTTCAAATCCATGGGAACGTCGTACAC
EX761240       <-- TCTGTCTCTGAGCTCGGCAACGTTTTCAAATCCATGGGAACGTCGTACAC
FD960549       <-- ..................................................
FD959847       <-- ..................................................
FD964588       --> TCTGTCTCTGAGCTCGGCAACGTTTTCAAATCCATGGGAACGTCGTACAC
EX748388       --> TCTGTCTCTGAGCTCGGCAACGTTTTCAAATCCATGGGAACGTCGTACAC
FD535278       --> TCTGTCTCTGAGCTCGGCAGCGTTTTCAAATCCATGGGAACGTCGTACAC
EV538942       --> TCTGTCTCTGAGCTCGGCAACGTTTTCAAATCCATGGGAACGTCGTACAC
EX757725       --> TCTGTCTCTGAGCTCGGCAACGTTTTCAAATCCATGGGAACGTCGTACAC
EX764173       --> TCTGTCTCTGAGCTCGGCAACGTTTTCAAATCCATGGGAACGTCGTACAC
EY930927       --> TCTGTCTCTGAGCTCGGCAACGTTTTCAAATCCATGGGAACGTCGTACAC
FD555995       --> TCTGTCTCTGAGCTCGGCAACGTTTTCAAATCCATGGGAACGTCGTACAC
FD963576       --> TCTGTCTCTGAGCTCGGCAACGTTTTCAAATCCATGGGAACGTCGTACAC
EX750235       --> TCTGTCTCTGAGCTCGGCAACGTTTTCAAATCCATGGGAACGTCGTACAC
EY916127       --> ..................................................

               251    -    301
UN19771        --> GGAGGCAGAGCTCAACCAAGTGTTGGACGACATCGACATCGACCGCGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753754       <-- GGAGGCAGAGCTCAACCAAGTGTTGGACGACATCGACATCGACCGCGACG
EV542843       <-- GGAGGCGGAGCTCAACCAAGTGTTGGACGACATCGACATCGACCGCGACG
EX768149       <-- GGAGGCAGAGCTCAACCAAGTGTTGGACGACATCGACATCGACCGCGACG
EX761240       <-- GGAGGCAGAGCTCAACCAAGTGTTGGACGACATCGACATCGACCGCGACG
FD960549       <-- ..................................................
FD959847       <-- ..................................................
FD964588       --> GGAGGCAGAGCTCAACCAAGTGTTGGACGACGTCGACATCGACCGCGACG
EX748388       --> GGAGGCAGAGCTCAACCAAGTGTTGGACGACATCGACATCGACCGCGACG
FD535278       --> GGAGGCAGAGCTCAACCAAGTGTTGGACGACATCGACATCGACCGCGACG
EV538942       --> GGAGGCGGAGCTCAACCAAGTGTTGGACGACATCGACATCGACCGCGACG
EX757725       --> GGAGGCAGAGCTCAACCAAGTGTTGGACGACATCGACATCGACCGCGACG
EX764173       --> GGAGGCAGAGCTCAACCAAGTGTTGGACGACATCGACATCGACCGCGACG
EY930927       --> GGAGGCAGAGCTCAACCAAGTGTTGGACGACATCGA--TCGACCGCGACG
FD555995       --> GGAGGCAGAGCTCAACCAAGTGTTGGACGACATCGACATCGACCGCGACG
FD963576       --> GGAGGCAGAGCTCAACCAAGTGTTGGACGACATCGACATCGACCGCGACG
EX750235       --> GGAGGCAGAGCTCAACCAAGTGTTGGACGACATCGACATCGACCGCGACG
EY916127       --> ........................................GACCGCGACG

               301    -    351
UN19771        --> GTTTCATCAACATGGAGGAGTTCGCCGCCATCTGCCGCTCGTCCTCCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753754       <-- GTTTCATCAACATGGAGGAGTTCGCCGCCATCTGCCGCTCGTCCTCCTCC
EV542843       <-- GTTTCATCAACATGGAGGAGTTCGCCGCCATCTGCCGCTCATCCTCCTCC
EX768149       <-- GTTTCATCAACATGGAGGAGTTCGCCGCCATCTGCCGCTCATCCTCCTCC
EX761240       <-- GTTTCATCAACATGGAGGAGTTCGCCGCCATCTGCCGCTCGTCCTCCTCT
FD960549       <-- ...........................CCATCTGCCGCTCGTCCTCCTCC
FD959847       <-- ..................................................
FD964588       --> GTTTCATCAACATGGAGGAGTTCGCCGCCATCTGCCGCTCGTCCTCCTCC
EX748388       --> GTTTCATCAACATGGAGGAGTTCGCCGCCATCTGCCGCTCGTCCTCCTCC
FD535278       --> GTTTCATCAACATGGAGGAGTTCGCCGCCATCTGCCGCTCGTCCTCCTCC
EV538942       --> GTTTCATCAACATGGAGGAGTTCGCCGCCATCTGCCGCTCATCCTCCTCC
EX757725       --> GTTTCATCAACATGGAGGAGTTCGCCGCCATCTGCCGCTCGTCCTCCTCT
EX764173       --> GTTTCATCAACATGGAGGAGTTCGCCGCCATCTGCCGCTCATCCTCCTCC
EY930927       --> GTTTCATCAACATGGAGGAGTTCGCCGCCATCTGCCGCTCGTCCTCCTCC
FD555995       --> GTTTCATCAACATGGAGGAGTTCGCCGCCATCTGCCGCTCGTCCTCCTCC
FD963576       --> GTTTCATCAACATGGAGGAGTTCGCCGCCATCTGCCGCTCGTCCTCCTCC
EX750235       --> GTTTCATCAACATGGAGGAGTTCGCCGCCATCTGCCGCTCGTCCTCCTCC
EY916127       --> GTTTCATCAACATGGAGGAGTTCGCCGCCATCTGCCGCTCGTCCTCCTCC

               351    -    401
UN19771        --> GCCACAGAGGTACGTGAAGCCTTCGATCTCTACGACCAGAACAAGAACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753754       <-- GCCACAGAGGTACGTGAAGCCTTCGATCTCTACGACCAGAACAAGAACGG
EV542843       <-- GCCACAGAGGTACGTGAAGCCTTCGATCTCTACGACCAGAACAAGAACGG
EX768149       <-- GCCACAGAGGTCCGTGAAGCCTTCGATCTTTACGACCAGAACAAGAACGG
EX761240       <-- GCCACAGAGGTACGTGAAGCCTTCGATCTCTACGACCAGAACAAGAACGG
FD960549       <-- GCCACAGAGGTACGTGAAGCCTTCGATCTCTACGACCAGAACAAGAACGG
FD959847       <-- ................AAGCCTTCGATCTCTACGACCAGAACAAGAACGG
FD964588       --> GCCACAGAGGTACGTGAAGCCTTCGATCTCTACGACCAGAACAAGAACGG
EX748388       --> GCCACAGAGGTACGTGAAGCCTTCGATCTCTACGACCAGAACAAGAACGG
FD535278       --> GCCACAGAGGTACGTGAAGCCTTCGATCTCTACGACCAGAACAAGAACGG
EV538942       --> GCCACAGAGGTACGTGAAGCCTTCGATCTCTACGACCAGAACAAGAACGG
EX757725       --> GCCACAGAGGTACGTGAAGCCTTCGATCTCTACGACCAGAACAAGAACGG
EX764173       --> GCCACAGAGGTCCGTGAAGCCTTCGATCTCTACGACCAGAACAAGAACGG
EY930927       --> GCCACAGAGGTACGTGAAGCCTTCGATCTCTACGACCATAACAAGAACGG
FD555995       --> GCCACAGAGGTACGTGAAGCCTTCGATCTCTACGACCAGAACAAGAACGG
FD963576       --> GCCACAGAGGTACGTGAAGCCTTCGATCTCTACGACCAGAACAAGAACGG
EX750235       --> GCCACAGAGGTACGTGAAGCCTTCGATCTCTACGACCAGAACAAGAACGG
EY916127       --> GCCACAGAGGTACGTGAAGCCTTCGATCTCTACGACCAGAACAAGAACGG

               401    -    451
UN19771        --> TCTGATCTCGTCCTCCGAGATCCACAAGGTTCTCAACCGTCTAGGTATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753754       <-- TCTGATCTCGTCCTCCGAGATCCACAAGGTTCTCAACCGTCTAGGTATGA
EV542843       <-- TCTGATCTCGTCCTCAGAGATCCACAAGGTTCTCAACCGTCTAGGTATGA
EX768149       <-- TCTGATCTCGTCCTCCGAGATCCACAAGGTTCTCAACCGTCTAGGTATGA
EX761240       <-- TCTGATCTCGTCCTCCGAGATCCACAAGGTTCTCAACCGTCTAGGTATGA
FD960549       <-- TCTGATCTCGTCCTCCGAGATCCACAAGGTTCTCAACCGTCTAGGTGTGA
FD959847       <-- TCTGATCTCGTCCTCCGAGATCCACAAGGTTCTCAACCGTCTAGGTATGA
FD964588       --> TCTGATCTCGTCCTCCGAGATCCACAAGGTTCTCAACCGTCTAGGTGTGA
EX748388       --> TCTGATCTCGTCCTCCGAGATCCACAAGGTTCTCAACCGTCTAGGTATGA
FD535278       --> TCTGATCTCGTCCTCCGAGATCCACAAGGTTCTCAACCGTCTAGGTATGA
EV538942       --> TCTGATCTCGTCCTCAGAGATCCACAAGGTTCTCAACCGTCTAGGTATGA
EX757725       --> TCTGATCTCGTCCTCCGAGATCCACAAGGTTCTCAACCGTCTAGGTATGA
EX764173       --> TCTGATCTCGTCCTCCGAGATCCACAAGGTTCTCAACCGTCTAGGTATGA
EY930927       --> TCTGATCTCGTCCTCCGAGATCCACAAGGTTCTCAACCGTCTAGGTATGA
FD555995       --> TCTGATCTCGTCCTCCGAGATCCACAAGGTTCTCAACCGTCTAGGTATGA
FD963576       --> TCTGATCTCGTCCTCCGAGATCCACAAGGTTCTCAACCGTCTAGGTATGA
EX750235       --> TCTGATCTCGTCCTCCGAGATCCACAAGGTTCTCAACCGTCTAGGTATGA
EY916127       --> TCTGATCTCGTCCTCCGAGATCCACAAGGTTCTCAACCGTCTAGGTATGA

               451    -    501
UN19771        --> CGTGTTCCGAAGAAGACTGCGTGAGAATGATCGGGCGTGTTGACACTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753754       <-- CGTGTTCCGAAGAAGACTGCGTGAGAATGATCGGGCGTGTTGGCACTGAC  Raphanus raphanistrum subsp. maritimus
EV542843       <-- CGTGTTCCGAAGAAGACTGCGTGAAAATGATCGGGCGTGTTGACACTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768149       <-- CGTGTTCCGAAGAAGACTGCGTGAGAATGATCGGGCGTGTTGACACTGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761240       <-- CGTGTTCCGAAGAAGACTGCGTGAAAATGATCGGGCGTGTTGACACTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960549       <-- CGTGTTCCGAAGAAGACTGCGTGAGAATGATCGGGCGTGTTGACACTGAC  Raphanus raphanistrum subsp. maritimus
FD959847       <-- CGTGTTCCGAAGAAGACTGCGTGAGAATGATCGGGCGTGTTGACACTGAC  Raphanus raphanistrum subsp. maritimus
FD964588       --> CGTGTTCCGAAGAAGACTGCGTGAGAATGATCGGGCGTGTTGACACTGAC  Raphanus raphanistrum subsp. maritimus
EX748388       --> CGTGTTCCGAAGAAGACTGCGTGAGAATGATCGGGCGTGTTGGCACTGAC  Raphanus raphanistrum subsp. maritimus
FD535278       --> CGTGTTCCGAAGAAGACTGCGTGAGAATGATCGGGCGTGTTGACACTGAC  Raphanus raphanistrum subsp. maritimus
EV538942       --> CGTGTTCCGAAGAAGACTGCGTGAAAATGATCGGGCGTGTTGACACTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757725       --> CGTGTTCCGAAGAAGACTGCGTGAAAATGATCGGGCGTGTTGACACTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764173       --> CGTGTTCCGAAGAAGACTGCGTGAGAATGATCGGGCGTGTTGACACTGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY930927       --> CGTGTTCCGAAGAAGACTGCGTGAGAATGATCGGGCGTGTTGACACTGAC  Raphanus sativus var. oleiformis
FD555995       --> CGTGTTCCGAAGAAGACTGCGTGAGAATGATCGGGCGTGTTGACACTGAC  Raphanus raphanistrum subsp. landra
FD963576       --> CGTGTTCCGAAGAAGACTGCGTGAGAATGATCGGGCGTGTTGACACTGAC  Raphanus raphanistrum subsp. maritimus
EX750235       --> CGTGTTCCGAAGAAGACTGCGTGAGAATGATCGGGCGTGTTGGCACTGAC  Raphanus raphanistrum subsp. maritimus
EY916127       --> CGTGTTCCGAAGAAGACTGCGTGAGAATGATCGGGCGTGTTGACACTGAC  Raphanus raphanistrum subsp. raphanistrum (NY)

               501    -    551
UN19771        --> GGCGACGGAAACGTTAACTTCGAGGAGTTCAAGAAGATGATGTCGTCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753754       <-- GGCGACGGAAACGTTAACTTCGAGGAGTTCAAGAAGATGATGTCGTCACC
EV542843       <-- GGCGACGGAAACGTTAACTTCGAGGAGTTCAAGAAGATGATGTCTTCACC
EX768149       <-- GGCGACGGAAACGTTAACTTCGAGGAGTTCAAGAAGATGATGTCGTCACC
EX761240       <-- GGCGACGGAAACGTTAACTTCGAGGAGTTCAAGAAGATGATGTCGTCCCC
FD960549       <-- GGCGACGGAAACGTTAACTTCGAGGAGTTCAAGAAGATGATGTCGTCACC
FD959847       <-- GGCGACGGAAACGTTAACTTCGAGGAGTTCAAGAAGATGATGTCGTCACC
FD964588       --> GGCGACGGAAACGTTAACTTCGAGGAGTTCAAGAAGATGATGTCGTCACC
EX748388       --> GGCGACGGAAACGTTAACTTCGAGGAGTTCAAGAAGATGATGTCGTCACC
FD535278       --> GGCGACGGAAACGTTAACTTCGAGGAGTTCAAGAAGATGATGTCGTCACC
EV538942       --> GGCGACGGAAACGTTAACTTCGAGGAGTTCAAGAAGATGATGTCTTCACC
EX757725       --> GGCGACGGAAACGTTAACTTCGAGGAGTTCAAGAAGATGATGTCGTCACC
EX764173       --> GGCGACGGAAACGTTAACTTCGAGGAGTTCAAGAAGATGATGTCGTCACC
EY930927       --> GGCGACGGAAACGTTAACTTCGAGGAGTTCAAGAAGATGATGTCGTCACC
FD555995       --> GGAGACGGAAACGTTAACTTCGAGGAGTTCAAGAAGATGATGTCGTCACC
FD963576       --> GGCGACGGAAACGTTAACTTCGAGGAGTTCAAGAAGATGATGTCGTCACC
EX750235       --> GGCGACGGAAACGTTAACTTCGAGGAGTTCAAGAAGATGATGTCGTCACC
EY916127       --> GGCGACGAAAACGTTAACTTCGAGGAGTTCAAGAAGATGATGTCGTCACC

               551    -    601
UN19771        --> TGAACTACTCAACAAGCAAGGATCCGCCTAGGGTTCCGATTCGCCCTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753754       <-- TGAACTACTCAACAAGCAAGGATCCGCCTAGGGTTCCGATTCGCCCTAAT  Raphanus raphanistrum subsp. maritimus
EV542843       <-- TGAACTGCTCAACAAGCAAGGATCCGCCTAGGGTTCCGATTCGCCCTAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768149       <-- TGAACTGCTCAACAAGCAAGGATCCGCCTAGGGTTCCGATTCGCCCTAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761240       <-- TGAACTTCTCAACAAGCAAGGATCCGCCTAGGGTTCCGATTCGCCCTAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960549       <-- TGAACTACTCAACAAGCAAGGATCCGCCTAGGGTTCCGATTCGCCCTAAT  Raphanus raphanistrum subsp. maritimus
FD959847       <-- TGAACTACTCAACAAGCAAGGATCCGCCTAGGGTTCCGATTCGCCCTAAT  Raphanus raphanistrum subsp. maritimus
FD964588       --> TGAACTACTCAACAAGCAAGGATCCGCCTAGGGTTCCGATTCGCCCTAAT  Raphanus raphanistrum subsp. maritimus
EX748388       --> TGAACTACTCAACAAGCAAGGATCCGCCTAGGGTTCCGATTCGCCCTAAT  Raphanus raphanistrum subsp. maritimus
FD535278       --> TGAACTACTCAACAAGCAAGGATCCGCCTAGGGTTCCGATTCGCCCTAAT  Raphanus raphanistrum subsp. maritimus
EV538942       --> TGAACTGCTCAACAAGCAAGGATCCGCCTAGGGTTCCGATTCGCCCTAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757725       --> TGAACTTCTCAACAAGCAAGGATCCGCCTAGGGTTCCGATTCGCCCTAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764173       --> TGAACTGCTCAACAAGCAAGGATCCGCCTAGGGTTCCGATTCGCCCTAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY930927       --> TGAACTTCTCAACAAGCAAGGATCCGCCTAGGGTTCCGATTCGCCCTAAT  Raphanus sativus var. oleiformis
FD555995       --> TGAACTTCTCAACAAGCAAGGATCCGCCTAGGGTTCCGATTCGCCCTAAT  Raphanus raphanistrum subsp. landra
FD963576       --> TGAACTACTCAACAAGCAAGGATCCGCCTAGGGTTCCGATTCGCCCTAAT  Raphanus raphanistrum subsp. maritimus
EX750235       --> TGAACTACTCAACAAGCAAGGATCCGCCTAGGGTTCCGATTCGCCCTAAT  Raphanus raphanistrum subsp. maritimus
EY916127       --> TGAACTTCTCAACAAGCAAGGATCCGCCTAGGGTTCCGATTCGCCCTAAT  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN19771        --> TTTT--ATGTTGGATAATGAGATCCATGGTTACATATA-ATATTGTATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753754       <-- TTTT--ATGTTGGATAATGAGATCCATGGTTACATATA-ATATTGTATAA
EV542843       <-- TTTTTTATGTTGGATAATGAGATCCATGGTTACATATA-ATATTGT---A
EX768149       <-- TTTT--ATGTTGGATAATGAGATCCATGGTTACATATATATAATATTGTA
EX761240       <-- TTTT--ATGTTGGATAATGAGATCCATGGTTACATATA-ATATTGTATAA
FD960549       <-- TTTT--ATGTTGGATAATGAGATCCATGGTTACATATA-ATATTGTATAA
FD959847       <-- TTTT--ATGTTAGATAATGAGATCCATGGTTACATATA-ATATTGTATAA
FD964588       --> TTTT--ATGTTGGATAATGAGATCCATGGTTACATATA-ATATTGTATAA
EX748388       --> TTTT--ATGTTGGATAATGAGATCCATGGTTACATATA-ATATTGTATAA
FD535278       --> TTTT--ATGTTGGATAATGAGATCCATGGTTACATATA-ATATTGTATAA
EV538942       --> TTTTTTATGTTGGATAATGAGATCCATGGTTACATATA-ATATTGTAT--
EX757725       --> TTTT--ATGTTGGATAATGAGATCCATGGTTACATATA-ATATTGTATAA
EX764173       --> TTTT--ATGTTGGATAATGAGATCCATGGTTACATATATATAATATTGTA
EY930927       --> TTTT--ATGTTGGATAATGAGATCCATGGTTACATATA-ATATTGTATAA
FD555995       --> TTTT--ATGTTGGATAATGAGATCCATAGTTACATATA-ATATTGTATAA
FD963576       --> TTTT--ATGTTAGATAATGAGATCCATGGTTACATATA-ATATTGTATAA
EX750235       --> TTTT--ATGTTGGATAATGAGATCCATGGTTACATATA-ATATTGTATAA
EY916127       --> TTTT--ATGTTGGATAATGAGATCCATGGTTACATATA-ATATTGTATAA

               651    -    701
UN19771        --> TGCTACTTGTTTACATTTCTAGGTTAACAAACAAATCGTTCTCTTCCTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753754       <-- TGCTACTTGTTTACATTTCTAGGTTAACAAACAAATCGTTCTCTTCCTAT
EV542843       <-- TGCTACTTGTTTACATTTCTAGGTTGACAAACAAATCGTTCTCTTCCTAT
EX768149       <-- TGCTACTTGTTTACATTTCTAGGTTAACAAACAAATCGTTCTCTTCCTAT
EX761240       <-- TGCTACTTGTTTACATTTCTAG-TCAACAAACAAATCGTTCTCTTCCTAT
FD960549       <-- TGCTACTTGTTTACATTTCTAGGTTAACAAACAAATCGTTCTCTTCCTAT
FD959847       <-- TGCTACTTGTTTACATTTCTAGGTTAACAAACAAATCGTTCTCTTCCTAT
FD964588       --> TGCTACTTGTTTACATTT................................
EX748388       --> TGCTACTTGTTTACATTTCTAGGTTAACAAACAAATCGTTCTCTTCCTAT
FD535278       --> TGCTACTTGTTTACATTTCTAGGTTAACAAACAAATCGTTCTCTTCCTAT
EV538942       --> -GCTACTTGTTTACATTTCTAGGTTGACAAACAAATCGTTCTCTTCCTAT
EX757725       --> TGCTACTTGTTTACATTTCTAG-TCAACAAACAAATCGTTCTCTTCCTAT
EX764173       --> TGCTACTTGTTTACATTTCTAGGTTAACAAACAAATCGTTCTCTTCCTAT
EY930927       --> TGCTACTTGTTTACATTTCTAGGTTAACAAACAAATCGTTCTCTTCCTAT
FD555995       --> TGCTACTTGTTTACATTTCTAGGTTAACAAACAAATCGTTATCTTCCTAT
FD963576       --> TGCTACTTGTTTACATTTCTAGGTTAACAAACAAATCGTTCTCTTCCTAT
EX750235       --> TGCTACTTGTTTACATTTCTAGGTTAACAAACAAATCGTTCTCTTCCTAT
EY916127       --> TGCTACTTGTTTACATTTCTAGGTTGACAAACAAATCGTTCTCTTCCTAT

               701    -    751
UN19771        --> ATATGGAATGATGAACGTCTTACCTGTGCAAGTATGATTACTTGCTGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753754       <-- ATATGGAATGATGAACGTCTTACCTGTGCAAGTATGATTACTTGCTGTTT
EV542843       <-- ATATGGAATGATGAACGTCTTACCTGTGCAAGTATAATTACTTGCTGTTT
EX768149       <-- ATATGGAATGAGGAACGTCTTACCTGTGCAAGTATGATTGCTTGCTGTTT
EX761240       <-- GTATGGAATGATGAACGTCTTACCTGTGCAAGTATGATTACTTGCAGTTT
FD960549       <-- ATATGGAATGATGAACGTCTTACCTGTGCAAGTATGATTACTTGCTGTTT
FD959847       <-- ATATGGAATGACGAACGTCTTACCTGTGCAAGTATGATTACTTGCTGTTT
FD964588       --> ..................................................
EX748388       --> ATATGGAATGATGAACGTCTTACCTGTGCAAGTATGATTACTTGCTGTTT
FD535278       --> ATATGGAATGATGAACGTCTTACCTGTGCAAGTATGATTACTTGCTGTTT
EV538942       --> ATATGGAATGATGAACGTCTTACCTGTGCAAGTATAATTACTTGCTGTTT
EX757725       --> GTATGGAATGATGAACGTCTTACCTGTGCAAGTATGATTACTTGCAGTTT
EX764173       --> ATATGGAATGAGGAACGTCTTACCTGTGCAAGTATGATTGCTTGCTGTTT
EY930927       --> ATATGGAATGATGAACGTCTTA............................
FD555995       --> ATATGGAATGATGAACGTCTTACCTGTGCAAGTATGATTACTTGCTGTTT
FD963576       --> ATATGGAATGACGAACGTCTTACCTGTGCAAGTATGATTACTTGCTGTTT
EX750235       --> ATATGGAATGATGAACGTCTTACCTGTGCAAGTATGATTACTTGCTGTTT
EY916127       --> ATATGGAATGATGAACGTCTTACCTGTGCAAGTATGATTACTTGCTGTTT

               751    -    801
UN19771        --> AAGCAATCGATAAACATATTTAAACTTCAAAAAA...........
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753754       <-- AAGCAATCGATAAACATATTTAAACTTC.................
EV542843       <-- AAGCAATCGATAAACATATTTAAACTcc.................
EX768149       <-- AAGCAATCGATAAACATATTTAAACTTCAgtttttagtgtcc...
EX761240       <-- AAGCAATCGATAAACATATTTAAACTTCAAAAAAa..........
FD960549       <-- AAGCAATCGATAAACATATTTAAACTTC.................
FD959847       <-- AAGCAATCGATAAACATATTTAAACTTCAgt..............
FD964588       --> .............................................
EX748388       --> AAGCAATCGATAAACATATTTAAACTTCAAAAAA...........
FD535278       --> AAGCAATCGAT..................................
EV538942       --> AAGCAATCGATA.................................
EX757725       --> AAGCAATCG....................................
EX764173       --> AAGCAATCGATAAACATATTTAAACTTCAgtttttagtgtcc...
EY930927       --> .............................................
FD555995       --> AAGCAATCGATAAACATATTTAAACTTCAgtttttagtgacaaaa
FD963576       --> A............................................
EX750235       --> AAGCAATCGATAAACATATTTAAACTTC.................
EY916127       --> AAGCAATCGATAAACATATTTAAACTTCAgttttt..........