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Alignment for radish unigene UN19787

               1      -     51
UN19787        --> GGCAAAATCATTATGTTTTTTAAATGATTATGAATGTTTTTTAAATGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- ..................................................
EY941369       <-- ..................................................
EX762864       <-- ..................................................
FD571324       <-- ..................................................
EY915633       <-- ..................................................
FD554430       --> GGCAAAATCATTATGTTTTTTAAATGATTATGAATGTTTTTTAAATGATT
EY936965       --> ..............................................GATT
EY926124       --> ..................................................
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> ..................................................
EX767040       --> ..................................................
FD575169       --> ..................................................
EX759216       --> ..................................................

               51     -    101
UN19787        --> ATGAATCGGCAGGAGTTTTTTTGACTATAACCAAAACTTGAAAGCCAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- ..................................................
EY941369       <-- ..................................................
EX762864       <-- ..................................................
FD571324       <-- ..................................................
EY915633       <-- ..................................................
FD554430       --> ATGAATCGGCAGGAGTTTTTTTGACTATAACCAAAACTTGAAAGCCAATA
EY936965       --> ATGAATCGGCAGGAGTTTTTTTGACTATAACCAAAACTTGAAAGCCAATA
EY926124       --> ..........................................AGCCAATA
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> ..................................................
EX767040       --> ..................................................
FD575169       --> ..................................................
EX759216       --> ..................................................

               101    -    151
UN19787        --> AGTATGAGATTTGGTCTATTACCACAATCGAGATACTATACAGTATTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ...acGAGATTTGGTCTATTACCACAATCGAGATACTATACAGTATTTTA
EX755036       <-- ....................atCACAATCGAGATACTATACAGTATTTTA
EY921510       <-- ..................................................
EY941369       <-- ..................................................
EX762864       <-- ..................................................
FD571324       <-- ..................................................
EY915633       <-- ..................................................
FD554430       --> AGTATGAGATTTGGTCTATTACCACAATCGAGATACTATACAGTATTTTA
EY936965       --> AGTATGAGATTTGGTCTATTACCACAATCGAGATACTATACAGTATTTTA
EY926124       --> AGTATGAGATTTGGTCTATTACCACAATCGAGATACTATACAGTATTTTA
EY911446       --> ...ATGAGATTTGGTCTATTACCACAATCGAGATACTATACAGTATTTTA
EY917640       --> ....aGAGATTTGGTCTATTACCACAATCGAGATACTATACAGTATTTTA
FD539745       --> ............GGTCTATTACCACAATCGAGATACTATACAGTATTTTA
EX767040       --> ....................ACCACAATCGAGATACTATACAGTATTTTA
FD575169       --> ....................cCCACAATCGAGATACTATACAGTATTTTA
EX759216       --> ....................atCACAATCGAGATACTATACAGTATTTTA

               151    -    201
UN19787        --> TTACAAGATGAAACCCGATACATAACAAGATGTACATCAGATAAAGCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- TTACAAGATGAAACCCGATACATAACAAGATGTACATCAGATAAAGCTCC
EX755036       <-- TTACAAGATGAAACCCGATACATAACAAGATGTACATCAGATAAAGCTCC
EY921510       <-- ..................................................
EY941369       <-- ..................................................
EX762864       <-- ..................................................
FD571324       <-- ..................................................
EY915633       <-- ..................................................
FD554430       --> TTACAAGATGAAACCCGATACATAACAAGATGTACATCAGATAAAGCTCC
EY936965       --> TTACAAGATGAAACCCGATACATAACAAGATGTACATCAGATAAAGCTCC
EY926124       --> TTACAAGATGAAACCCGATACATAACAAGATGTACATCAGATAAAGCTCC
EY911446       --> TTACAAGATGAAACCCGATACATAACAAGATGTACATCAGATAAAGCTCC
EY917640       --> TTACAAGATGAAACCCGATACATAACAAGATGTACATCAGATAAAGCTCC
FD539745       --> TTACAAGATGAAACCCGATACATAACAAGATGTACATCAGATAAAGCTCC
EX767040       --> TTACAAGATGAAACCCGATACATAACAAGATGTACATCAGATAAAGCTCC
FD575169       --> TTACAAGATGAAACCCGATACATAACAAGATGTACATCAGATAAAGCTCC
EX759216       --> TTACAAGATGAAACCCGATACATAACAAGATGTACATCAGATAAAGCTCC

               201    -    251
UN19787        --> TACAAAGTTTCACTCCAGCTCCATGACCGGAAATACATTAATTACATAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- TACAAAGTTTCACTCCAGCTCCATGACCGGAAATACATTAATTACATAAC
EX755036       <-- TACAAAGTTTCACTCCAGCTCCATGACCGGAAATACATTAATTACATAAC
EY921510       <-- ..................................................
EY941369       <-- ..................................................
EX762864       <-- ..................................................
FD571324       <-- ..................................................
EY915633       <-- ..................................................
FD554430       --> TACAAAGTTTCACTCCAGCTCCATGACCGGAAATACATTAATTACATAAC
EY936965       --> TACAAAGTTTCACTCCAGCTCCATGACCGGAAATACATTAATTACATAAC
EY926124       --> TACAAAGTTTCACTCCAGCTCCATGACCGGAAATACATTAATTACATAAC
EY911446       --> TACAAAGTTTCACTCCAGCTCCATGACCGGAAATACATTAATTACATAAC
EY917640       --> TACAAAGTTTCACTCCAGCTCCATGACCGGAAATACATTAATTACATAAC
FD539745       --> TACAAAGTTTCACTCCAGCTCCATGACCGGAAATACATTAATTACATAAC
EX767040       --> TACAAAGTTTCACTCCAGCTCCATGACCGGAAATACATTAATTACATAAC
FD575169       --> TACAAAGTTTCACTCCAGCTCCATGACCGGAAATCCATTAATTACATAAC
EX759216       --> TACAAAGTTTCACTCCAGCTCCATGACCGGAAATACATTAATTACATAAC

               251    -    301
UN19787        --> AAATGTATACTTGGTTTACAAGTCCACCCACGTTTAACTGGAGTTACCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- AAATGTATACTTGGTTTACAAGTCCACCCACGTTTAACTGGAGTTACCGC
EX755036       <-- AAATGTATACTTGGTTTACAAGTCCACCCACGTTTAACTGAAGTTACCGC
EY921510       <-- ..................................................
EY941369       <-- ..................................................
EX762864       <-- ..................................................
FD571324       <-- ..................................................
EY915633       <-- ..................................................
FD554430       --> AAATGTATACTTGGTTTACAAGTCCACCCACGTTTAACTGGAGTTACCGC
EY936965       --> AAATGTATACTTGGTTTACAAGTCCACCCACGTTTAACTGGAGTTACCGC
EY926124       --> AAATGTATACTTGGTTTACAAGTCCACCCACGTTTAACTG-AGTTACCGC
EY911446       --> AAATGTATACTTGGTTTACAAGTCCACCCACGTTTAACTGGAGTTACCGC
EY917640       --> AAATGTATACTTGGTTTACAAGTCCACCCACGTTTAACTGGAGTTACCGC
FD539745       --> AAATGTATACTTGGTTTACAAGTCCACCCACGTTTAACTGGAGTTACCGC
EX767040       --> AAATGTATACTTGGTTTACAAGTCCACCCACGTTTAACTGGAGTTACCGC
FD575169       --> AAATGTACACTTGGTTTACAAGTCCACCCACGTTTAACTGGAGTTACCGC
EX759216       --> AAATGTATACTTGGTTTACAAGTCCACCCACGTTTAACTGAAGTTACCGC

               301    -    351
UN19787        --> CCTTATGAAGTTCCCTCTCCTTGTGCACCTTCAGTTGTGCCTTGTTACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- CCTTATGAAGTTCCCTCTCCTTGTGCACCTTCAGTTGTGCCTTGTTACCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755036       <-- CCTTATGAAGTTCCCTCTCCTTGTGCACCTTCAGTTGTGCCTTGTTACCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY921510       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY941369       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX762864       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571324       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY915633       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554430       --> CCTTATGAAGTTCC-ACTCCTTGTGCACCTTCAGTTGTGCCTTGTTACCC  Raphanus raphanistrum subsp. landra
EY936965       --> CCTTATGAAGTTCC-TCTCCTTGTGCACCTTCAGTTGTGCCTTGTTACCC  Raphanus sativus cv Early Scarlet Globe
EY926124       --> CCTTATGAAGTTCC-TCTCCTTGTGCACCTTCAGTTGTGCCTTGTTACCC  Raphanus sativus var. oleiformis
EY911446       --> CCTTATGAACTTCCCTCTCCTTGTGCACCTTCAGTTGTGCCTTGTTACCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY917640       --> CCTTATGAACTTCCCTCTCCTTGTGCACCTTCAGTTGTGCCTTGTTACCC  Raphanus raphanistrum subsp. landra
FD539745       --> CCTTATGAAGTTCCCTCTCCTTGTGCACCTTCAGTTGTGCCTTGTTACCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX767040       --> CCTTATGAACTTCCCTCTCCTTGTGCACCTTCAGTTGTGCCTTGTTACCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD575169       --> CCTTATGAAGTTCC-TCTCCTTGTGCACCTTCAGTTGTGCCTTGTTACCC  Raphanus sativus cv Early Scarlet Globe
EX759216       --> CCTTATGAAGTTCCCTCTCCTTGTGCACCTTCAGTTGTGCCTTGTTACCC  Raphanus raphanistrum subsp. raphanistrum (MS)

               351    -    401
UN19787        --> GGTTTGTGAAAGCCGTCTCCAGTTAACTATTTCATGGTGGTTCTGCAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- GGTTTGTGAAAGCCGTCTCCAGTTAACTATTTCATGGTGGTTCTGCAAGT
EX755036       <-- GGTTTGTGAAAGCCGTCTCCAGTTAACTATTTCATGGTGGTTCTGCAAGT
EY921510       <-- ..................................................
EY941369       <-- ..................................................
EX762864       <-- ..................................................
FD571324       <-- ..................................................
EY915633       <-- ..................................................
FD554430       --> GGTTTGTGAAAGCCGTCTCCAGTTAACTATTTCATGGTGGTTCTGCAAGT
EY936965       --> GGTTTGTGAAAGCCGTCTCCAGTTAACTATTTCATGGTGGTTCTGCAAGT
EY926124       --> GGTTTGTGAAAGCCGTCTCCAGTTAACTATTTCATGGTGGTTCTGCAAGT
EY911446       --> GGTTTGTGAAAGCCGTCTCCAGTTAACTATTTCATGGTGGTTCTGCAAGT
EY917640       --> GGTTTGTGAAAGCCGTCTCCAGTTAACTATTTCATGGTGGTTCTGCAAGT
FD539745       --> GGTTTGTGAAAGCCGTCTCCAGTTAACTATTTCATGGTGGTTCTGCAAGT
EX767040       --> GGTTTGTGAAAGCCGTCTCCAGTTAACTATTTCATGGTGGTTCTGCAAGT
FD575169       --> GGTTTGTGAAAGCCGTCTCCAGTTAACTATTTCATGGTGGTTCTGCAAGT
EX759216       --> GGTTTGTGAAAGCCGTCTCCAGTTAACTATTTCATGGTGGTTCTGCAAGT

               401    -    451
UN19787        --> AGCTAGATGTTGTACTTCCTCCTCCAATCCCATTCTCTTCACTAGCAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- AGCTAGATGTTGTACTTCCTCCTCCAATCCCATTCTCTTCGCTAGCAAAT
EX755036       <-- AGCTAGATGTTGTACTTCCTCCACCAATCCCATTCTCTTCACTAGCAAAC
EY921510       <-- ..................................................
EY941369       <-- ..................................................
EX762864       <-- ..................................................
FD571324       <-- ..................................................
EY915633       <-- ..................................................
FD554430       --> AGCTAGACGTTGTACTTCCTCCTCCAATCCCATTCTCTTCACTAGCAAAT
EY936965       --> AGCTAGACGTTGTACTTCCTCCTCCAATCCCATTCTCTTCACTAGCAAAT
EY926124       --> AGCTAGATGTTGTACTTCCTCCTCCAATCCCATTCTCTTCACTAGCAAAT
EY911446       --> AGCTAGATGTTGTACTTCCTCCTCCAATCCCATTCTCTTCACTAGCAAAT
EY917640       --> AGCTAGATGTTGTACTTACTCCTCCAATCCCATTCTCTTCACTAGCAAAT
FD539745       --> AGCTAGATGTTGTACTTCCTCCTCCAATCCCATTCTCTTCGCTAGCAAAT
EX767040       --> AGCTAGATGTTGTACTTCCTCCTCCAATCCCATTCTCTTCACTAGCAAAT
FD575169       --> AGCTAGACGTTGTACTTCCTCTTCCAATCCCATTCTCTTCACTAGCAAAT
EX759216       --> AGCTAGATGTTGTACTTCCTCCACCAATCCCATTCTCTTCACTAGCAAAC

               451    -    501
UN19787        --> TGTTCAGAGTACCCTGACCACTCGGGGACTATGCCTCCGTCCCTCTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- TGTTCAGAGTACCCTGACCACTCGGGGACTATGCCTCCGTCCCTCTCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755036       <-- TGTTCAGAGTACCCTGACCACTCTGGGACTATGCCTCCGTCCCTCTCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY921510       <-- .................CCACTCAGGGACTATGCCTCCGTCCCTCTATCT  Raphanus raphanistrum subsp. landra
EY941369       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX762864       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571324       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY915633       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554430       --> TGTTCAGAGTACCCTGACCACTCGGGGACTATGCCTCCGTCCCTCTCTCT  Raphanus raphanistrum subsp. landra
EY936965       --> TGTTCAGAGTACCCTGGCCACTCGGGGACTATGCCTCCGTCCCTCTCTCT  Raphanus sativus cv Early Scarlet Globe
EY926124       --> TGTTCAGAGTATCCTGACCACTCGGGGACTATGCCTCCGTCCCTCTCTCT  Raphanus sativus var. oleiformis
EY911446       --> TGTTCAAAGTACCCTGACCACTCAGGGACTATGCCTCCGTCCCTCTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY917640       --> TGTTCAGAGTACCCTGACCACTCAGGGACTATGCCTCCGTCCCTCTATCT  Raphanus raphanistrum subsp. landra
FD539745       --> TGTTCAGAGTACCCTGACCACTCGGGGACTATGCCTCCGTCCCTCTCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX767040       --> TGTTCAGAGTACCCTGACCACTCAGGGACTATGCCTCCGTCCCTCTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD575169       --> TGTTCAGAGTACCCTGACCACTCGGGGACTATGCCTCCGTCCCTCTCTCT  Raphanus sativus cv Early Scarlet Globe
EX759216       --> TGTTCAGAGTACCCTGACCACTCTGGGACTATGCCTCCGTCCCTCTCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)

               501    -    551
UN19787        --> TCTTCTGCTGCTGGAAGATTCTGCTGTCGAGTCTTCAGTGCTTTCTGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- TCTTCTGCTGCTGGAAGATTCTGCTGTCGAGTCTTCAGTGCTTTCCGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755036       <-- TCTTCTGCTGCTGGAAGATTCTGCTGTCGAGTCTTCAGTGCTTTCTGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY921510       <-- TCTTCTGCTGCTGGAAGATTCTGCCGTCGAGTCTTCAGTGCTTTCTGCAA  Raphanus raphanistrum subsp. landra
EY941369       <-- ....................CTGCTGTCGAGTCTTCAGTGCTTTCTGCAA  Raphanus sativus cv Early Scarlet Globe
EX762864       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571324       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY915633       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554430       --> TCTTCTGCTGCTGGAAGATTCTGCTGTCGAGTCTTCAGTGCTTTCTGCAA  Raphanus raphanistrum subsp. landra
EY936965       --> TCTTCTGCTGCTGGAAGATTCTGCTGTCGAGTCTTCAGTGCTTTCTGCAA  Raphanus sativus cv Early Scarlet Globe
EY926124       --> TCTTCTGCTGCTGGAAGATTCTGCTGTCGAGTCTTCAGTGCTTTCTGCAA  Raphanus sativus var. oleiformis
EY911446       --> TCTTCTGCTGCTGGAAAATTCTGCCGTCGAGTCTTCAGTGCTTTCTGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY917640       --> TCTTCTGCTGCTGGAAGATTCTGCCGTCGAGTCTTCAGTGCTTTCTGCAA  Raphanus raphanistrum subsp. landra
FD539745       --> TCTTCTGCTGCTGGAAGATTCTGCTGTCGAGTCTTCAGTGCTTTCCGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX767040       --> TCTTCTGCTGCTGGAAGATTCTGCCGTCGAGTCTTCAGTGCTTTCTGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD575169       --> TCTTCTGCTGCTGGAAGATTCTGCTGTCGAGTCTCCAGTGCTTTCTGCAA  Raphanus sativus cv Early Scarlet Globe
EX759216       --> TCTTCTGCTGCTGGAAGATTCTGCTGTCGAGTCTTCAGTGCTTTCTGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN19787        --> CAATTCTAATATTGAATTCTGGAATCATAGCAGTGACTTGGTTCGAAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- CAATTCTAATATTGAATTCTGGAATCATAGCAGTGACTTGGTTTGAAACC
EX755036       <-- CAATTCTAATATTGAATTCTGGAATCATTGCAGTGACTTGGTTCGACACC
EY921510       <-- CAATTCTAATATTGAATTCTGGAATCATAGCAGTGACTTGGTTCGAAACC
EY941369       <-- CAATTCTAATATTGAATTCTGGAATCATAGCAGTGACTTGGTTCGAAACC
EX762864       <-- ..................................................
FD571324       <-- ..................................................
EY915633       <-- ..................................................
FD554430       --> CAATTCTAATATTGAATTCTGGAATCATAGCAGTGACTTGGTTCGAAACC
EY936965       --> CAATTCTAATATTGAATTCTGGAATCATAGCAGTGACTTGGTTCGAAACC
EY926124       --> CAATTCTAATATTGAATTCTGGAATCATAGCAGTGACTTGGTTTGAAACC
EY911446       --> CAATTCTAATATTGAATTCTGGAATCATAGCAGTGACTTGGTTCGAAACC
EY917640       --> CAATTCTAATATTGAATTCTGGAATCATAGCAGTGACTTGGTTCGAAACC
FD539745       --> CAATTCTAATATTGAATTCTGGAATCATAGCAGTGACTTGGTTTGAAACC
EX767040       --> CAATTCTAATATTGAATTCTGGAATCATAGCAGTGACTTGGTTCGAAACC
FD575169       --> CAATTCTAATATTGAATTCTGGAATCATAGCAGTGACTTGGTTCGAAACC
EX759216       --> CAATTCTAATATTGAATTCTGGAATCATTGCAGTGACTTGGTTCGACACC

               601    -    651
UN19787        --> GGATCTGCTCTTGCCTGCTGCTGCTGCTGCTGCTGCTG---AGCTTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- GGGTCTGCTCTTGCCTGCTGCc............................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755036       <-- GGATCTGCTCTTGCCTGCTGCTGCTGCTGCTGCTGCTG---AGCTTGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY921510       <-- GGATCTGCTCTTGCCTGCTGCTGCTGCTGCTGC---TG---AGCTTGGTT  Raphanus raphanistrum subsp. landra
EY941369       <-- GGATCTGCTCTTGCCTGCTGCTGCTGCTGCTGC---TG---AGCTTGGTT  Raphanus sativus cv Early Scarlet Globe
EX762864       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571324       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY915633       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554430       --> GGATCTGCTCTTGCCTGCTGCTGCTGCTGCTGCTG------AGCTTGGTT  Raphanus raphanistrum subsp. landra
EY936965       --> GGATCTGCTCTTGCCTGCTGCTGCTGCTGCTGCTG------AGCTTGGTT  Raphanus sativus cv Early Scarlet Globe
EY926124       --> GGATCTGCTCTTGCCTGCTGCTGCTGCTGCTGCTG------AGCTTGGTT  Raphanus sativus var. oleiformis
EY911446       --> GGATCTGCTCTTGCCTGCTGCTGCTGCTGCTGCTG------AGCTTGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY917640       --> GGATCTGCTCTTGCCTGCTGCTGCTGCTGCTGCTG------AGCTTGGTT  Raphanus raphanistrum subsp. landra
FD539745       --> GGGTCTGCTCTTGCCTGCTGCTGCTGCTGCTGCTGCTGCTGAGCTTGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX767040       --> GGATCTGCTCTTGCCTGCTGCTGCTGCTGCTGCTG------AGCTTGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD575169       --> GGATCTGCTCTTGCCTGCTGCTGCTGCTGATGCTG------AGCTTGGTT  Raphanus sativus cv Early Scarlet Globe
EX759216       --> GGATCTGCTCTTGCCTGCTGCTGCTGCTGCTGCTGCTG---AGCTTGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN19787        --> GGTGTTGACCATGTTTCTCGGAACCTCTGCTCTGCTATCTCCAACTGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- GGTGTTGACCATGTTTCTCGGAACCTCTGCTCTGCTATCTCCAACTGAAT
EY921510       <-- GGTGTTGACCATGTTTCTCGGAACATCTGCTCTGCTATCTCCAACTGAAT
EY941369       <-- GGTGTTGACCATGTTTCTCGGAACCTCTGCTCTGCTATCTCCAACTGAAT
EX762864       <-- ..................................................
FD571324       <-- ..................................................
EY915633       <-- ..................................................
FD554430       --> GGTGTTGACCATGTTTCTCGGAACCTCTGCTCTGCTATCTCCAACTGAAT
EY936965       --> GGTGTTGACCATGTTTCTCGGAACCTCTGCTCTGCTATCTCCAACTGAAT
EY926124       --> GGTGTTGACCATATTTCTCGGAACCTCTGCTCTGCTATCTCCAACTGAAT
EY911446       --> GGTGTTGACCATGTTTCTCGGAACCTCTGCTCTGCTATCTCCAACTGAAT
EY917640       --> GGTGTTGACCATGTTTCTCGGAACATCTGCTCTGCTATCTCCAACTGAAT
FD539745       --> GGTGTTGACCATGTTTCTCGGAACCTCTGCTCTGCTATCTCCAACTGAAT
EX767040       --> GGTGTTGACCATGTTTCTCGGAACCTCTGCACTGCTATCTCCAACTGAAT
FD575169       --> GGTGTTGACCATGTTTCTCGGAACCTCTGCTCTGCTATCTCCAACTGAAT
EX759216       --> GGTGTTGACCATGTTTCTCGGAACCTCTGCTCTGCTATCTCCAACTGAAT

               701    -    751
UN19787        --> TTCTTACATTCAGAGACGACTCTTCATCTTCTTCAGGTCTGATCAAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755036       <-- TTCTCACATTCAGAGACGACTCTTCATCTTCTTCAGGTCTGATCAAAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY921510       <-- TTCTTACATTCAGAGACGACTCTTCATCTTCTTCAGGTCTGATCAAAGAA  Raphanus raphanistrum subsp. landra
EY941369       <-- TTCTTACATTGAGAGACGACTCTTCATCTTCTTCAGGTCTGATCAAAGAA  Raphanus sativus cv Early Scarlet Globe
EX762864       <-- .........................ATCTTCTTCAGGTCTGATCAAAGA-  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571324       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY915633       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554430       --> TTCTTACATTGAGAGACGACTCTTCATCTTCTTCAGGTCTGATCAAAGAA  Raphanus raphanistrum subsp. landra
EY936965       --> TTCTTACATTGAGAGACGACTCTTCATCTTCTTCAGGTCTGATCAAAGAA  Raphanus sativus cv Early Scarlet Globe
EY926124       --> TTCTCACATTCAGAGACGACTCTTCATCTTCTTCAGGTCTGATCAAAGAA  Raphanus sativus var. oleiformis
EY911446       --> TTCTTACATT........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY917640       --> TTCTTACATTCAGAGACGACTCTTCATCTTCTTCAGGTCTGATCAAAGAA  Raphanus raphanistrum subsp. landra
FD539745       --> TTCTCACATTCAGAGACGACTCTTCGTCTTCTTCAGGTCTGATCAAAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX767040       --> TTCTTACATTCAGAGACGACTCTTCATCTTCTTCAGGTCTGATCAAAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD575169       --> TTCTTACATTGAGAGACGACTCTTCATCTTCTTCAGGTCTGA........  Raphanus sativus cv Early Scarlet Globe
EX759216       --> TTCTCACATTCAGAGACGACTCTTCATCTTCTTCAGGTCTGATCAAAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               751    -    801
UN19787        --> GTAGTAATGCTTGGAACCATTTGATCCTCATATCTCCTGACTGGATTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755036       <-- GTAGTAATGCTTGGAACCATTTGATCCTCATATCTCCTGACTGGGTTGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY921510       <-- GTAGTAATGCTTGGAACCATTTGATCCTCATATCTCCTGACTGGATTGAG  Raphanus raphanistrum subsp. landra
EY941369       <-- GTAGTAATGCTTGGAACCATTTGATCCTCATATCTCCTGACTGGATTGAG  Raphanus sativus cv Early Scarlet Globe
EX762864       <-- GTAGTAATGCTTGGAACCATTTGATCCTCATATCTC-TGACTGGATTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD571324       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY915633       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554430       --> GTAGTAATGCTTGGAACCATTTGATCCTCATATCTCCTGACTGGATTGAG  Raphanus raphanistrum subsp. landra
EY936965       --> GTAGTAATGCTTGGAACCATTTGATCCTCATATCTCCTGACTGGATTGAG  Raphanus sativus cv Early Scarlet Globe
EY926124       --> GTAGTAATGCTTGGAACCATTTGATCCTCATATCTCCTGACCGGGTTGAG  Raphanus sativus var. oleiformis
EY911446       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY917640       --> GTAGTAATGCTTGGAACCATTTGATCCTCATATCTCCTGACTGGATTGAG  Raphanus raphanistrum subsp. landra
FD539745       --> GTAGTAATGCTTGGAACCATTTGATCCTCATATCTCCTGACTGGGTTGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX767040       --> GTAGTAATGCTTGGAACCATTTGATCCTCATATCTCCTGACTGGATTGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD575169       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX759216       --> GTAGTAATGCTTGGAACCATTTGATCCTCATATCTCCTGACTGGGTTGAG  Raphanus raphanistrum subsp. raphanistrum (MS)

               801    -    851
UN19787        --> TCTGGTTGGTTCAGTCTCTTCCATCGTGATGTCTCTAGGGAACTCGATAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- TCTGGTCGGTTCAGTCTCTTCCATCGTGc.....................
EY921510       <-- TCTGGTTGGTTCAGTCTCTTCCATCGTGATGTCTCTAGGGAACTCGATAG
EY941369       <-- TCTGGTTGGTTCAGTCTCTTCCATCGTGATGTCTCTAGGGAACTCGATAG
EX762864       <-- TCTGGTTGGTTCAGTCTCTTCCATCGTGATGTCTCTAGGGAACTCGATAG
FD571324       <-- ..................................................
EY915633       <-- ..................................................
FD554430       --> TCTGGTTGGTTCAGTCTCTTCCATCGTGATGTCTCTAGG...........
EY936965       --> TCTGGTTGGTTCAGTCTCTTCCATCGTGATGTCTCTAGGGA.........
EY926124       --> TCTGGTTGGTTCAGTCTCTTCCATTGTGATGTCTCTAGGGAACTCGATAG
EY911446       --> ..................................................
EY917640       --> TCTGG.............................................
FD539745       --> TCTGGTAGGTTCAGTCTCTTCCATTGTAATGTCTCTAGGGAACTCGATAG
EX767040       --> TCTGGTTGGTTCAGTCTCTTCCATCGTGATGTCTCTAGGGAACTCGATAG
FD575169       --> ..................................................
EX759216       --> TCTGGTCGGTTCAGTCTCTTCCATCGTGc.....................

               851    -    901
UN19787        --> GAGCTTCCTCAAACTCAGTAGAATCTCCAAGCCCTTCCTCCGATCCGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- GAGCTTCCTCAAACTCAGTAGAATCTCCAAGCCCTTCCTCCGATCCGTTC
EY941369       <-- GAGCTTCCTCAAACTCAGTAGAATCTCCAAGCCCTTCCTCGGATCCATTC
EX762864       <-- GAGCT-CCTCAAACTCAGTAGAATCTCCAAGCCCTTCCTCCGATCCGTTC
FD571324       <-- ..................................................
EY915633       <-- ..................................................
FD554430       --> ..................................................
EY936965       --> ..................................................
EY926124       --> GAGCTTCC..........................................
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> GAGCTTCCTCAAACTCAGTAGAATCTCCAAGCC.................
EX767040       --> GAGCTTCCTCAAACTCAGTAGAATCTCCAAGCCCTTCCTCCGATCCGTTC
FD575169       --> ..................................................
EX759216       --> ..................................................

               901    -    951
UN19787        --> TCTATCGCAGCTCTTGCGGCAGCTTCTAGTTGCCACATCTGCGAAAGCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- TCTATCGCAGCTCTTGCGGCAGCTTCTAGTTGCCACATCTGCGAAAGCGC
EY941369       <-- TCAATCGCAGTTCTCGAGGCAGCTTCTAGTTGCCACATCTGCGAAAGCGC
EX762864       <-- TCTATCGCAGCTCTTGCGGCAGCTTCTAGTTGCCACATCTGCGAAAGCGC
FD571324       <-- ..................................................
EY915633       <-- ..................................................
FD554430       --> ..................................................
EY936965       --> ..................................................
EY926124       --> ..................................................
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> ..................................................
EX767040       --> TCTATCGCAGCTCTTGCGGCAGCTTCTAGTTGCCACATCTGCGAA-GCGC
FD575169       --> ..................................................
EX759216       --> ..................................................

               951    -   1001
UN19787        --> TTCGTGAAGCCGTGCTTTCGCTTCATCTAATCCAACAATTGGTCGAGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- TTCGTGAAGCCGTGCTTTCGCTTCATCTAATCCAACAATTGGTAGAGGAT
EY941369       <-- TTCGTGAAGCCGTGCTTTCGCTTCATCTAATCCAACAATTGGTCGAGGAT
EX762864       <-- TTCGTGAAGCCGTGCTTTCGCTTCATCTAATCCAACAATTGGTCGAGGAT
FD571324       <-- ..................................................
EY915633       <-- ..................................................
FD554430       --> ..................................................
EY936965       --> ..................................................
EY926124       --> ..................................................
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> ..................................................
EX767040       --> TTCGTGAAGCCGTGCTTT................................
FD575169       --> ..................................................
EX759216       --> ..................................................

               1001   -   1051
UN19787        --> AGTTTGATCCGAGCTCAATACCAGCAGCTTGAAGCACGGACTCAGGTGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- AGTTTGATCCGAGCTCAATACCAGCAGCTTGAAGCACGGACTCAGGTGCG
EY941369       <-- AGTTTGATCCGAGCTCAATACCAGCAGCTTGAAGCACGGACTCAGGTGCG
EX762864       <-- AGTTTGATCCGAGCTCAATACCAGCAGCTTGAAGCACGGACTCAGGTGCG
FD571324       <-- ..................................................
EY915633       <-- ..................................................
FD554430       --> ..................................................
EY936965       --> ..................................................
EY926124       --> ..................................................
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> ..................................................
EX767040       --> ..................................................
FD575169       --> ..................................................
EX759216       --> ..................................................

               1051   -   1101
UN19787        --> TTCCACGGATGATGTATCCACTCTGTGGGGAGTCTCGAAAGTTCTGGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- TTCCACGGATGATGTACCCACTCTGTGGGGAGTCTCGAAAGTTCAGGGAG
EY941369       <-- TTCCACGGATGATGTATCCACTCTGTGGGGAGTCTTGAAAGCTCTGGGAG
EX762864       <-- TTCCACGGATGATGTATCCACTCTGTGGGGAGTCTCGAAAGTTCAGGGAG
FD571324       <-- ..................................ttGAAAGCTCTGGGAG
EY915633       <-- ..................................................
FD554430       --> ..................................................
EY936965       --> ..................................................
EY926124       --> ..................................................
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> ..................................................
EX767040       --> ..................................................
FD575169       --> ..................................................
EX759216       --> ..................................................

               1101   -   1151
UN19787        --> CCATCTCCTTACGTATTCACCGTTTGGATCAAACTTGTATCCTTCGAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- CCATCTCCTTACGTATTCACCc............................
EY941369       <-- CCATCTCCTTACGTATTCACCGTTTGGATCAAACTTGTATCCTTCGAACT
EX762864       <-- CCATCTCCTTACGTATTCACCGTTTGGATCAAACTTGTATCCTTCGAACT
FD571324       <-- CCATCTCCTTACGTATTCACCGTTTGGATCAAACTTGTATCCTTCGAACT
EY915633       <-- ..................................................
FD554430       --> ..................................................
EY936965       --> ..................................................
EY926124       --> ..................................................
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> ..................................................
EX767040       --> ..................................................
FD575169       --> ..................................................
EX759216       --> ..................................................

               1151   -   1201
UN19787        --> GAGGGTTATCTATGCGGTCAAACTCCCGGCTATCCGGGAGAGTACCGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- ..................................................
EY941369       <-- GAGGGTTATCTATGCGGTCAAACTCCCGGCTATCCGGGAGAGTACCGGTA
EX762864       <-- GAGGGTTGTCTATCCGGTCAAACTCCCGGCTATCCGGGAGAGTACCGGTA
FD571324       <-- GAGGGTTATCTATGCGGTCAAACTCCCGGCTATCCGGGAGAGTACCGGTA
EY915633       <-- ..................................................
FD554430       --> ..................................................
EY936965       --> ..................................................
EY926124       --> ..................................................
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> ..................................................
EX767040       --> ..................................................
FD575169       --> ..................................................
EX759216       --> ..................................................

               1201   -   1251
UN19787        --> ATGTACTGCCAGCCAAGAGCATCACTCTCTAAATCTGCATCAAGAAGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- ..................................................
EY941369       <-- ATGTACc...........................................
EX762864       <-- ATGTACTGCCAGCCAAGAGCATCACTCTCTAAATCTGCATCAAGAAGTGT
FD571324       <-- ATGTACTGCCAGCCAAGAGCATCACTCTCTAAATCTGCATCAAGAAGTGT
EY915633       <-- ..............................................GTGT
FD554430       --> ..................................................
EY936965       --> ..................................................
EY926124       --> ..................................................
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> ..................................................
EX767040       --> ..................................................
FD575169       --> ..................................................
EX759216       --> ..................................................

               1251   -   1301
UN19787        --> GTCCCAGAAATACTTCATCCCCCATCTCCACGGCAGTTGAAGCACTTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- ..................................................
EY941369       <-- ..................................................
EX762864       <-- GTCCCAGAAATACTTCATCCCCCATCTCCACGGCAGTTGAAGCACTTTCA
FD571324       <-- GTCCCAGAAATACTTCATCCCCCATCTCCATGGCAGTTGAAGCACTTTCA
EY915633       <-- GTCCCAGAAATACTTCATCCCCCATCTCCACGGCAGTTGAAGCACTTTCA
FD554430       --> ..................................................
EY936965       --> ..................................................
EY926124       --> ..................................................
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> ..................................................
EX767040       --> ..................................................
FD575169       --> ..................................................
EX759216       --> ..................................................

               1301   -   1351
UN19787        --> CAAAGAAGCTTGAAACAACTACTCTTATGCGATCATGCAACCAACCAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- ..................................................
EY941369       <-- ..................................................
EX762864       <-- CAAAGAAGCTTGAAACAACTACTCTTATGCGATCATGCAACCAACCAGTA
FD571324       <-- CAAAGAAGCTTGATACAACTACTCTTATGCGATCATGCAACCAACCAGTA
EY915633       <-- CAAAGAAGCTTGAAACAACTACTCTTATGCGATCATGCAACCAACCAGTA
FD554430       --> ..................................................
EY936965       --> ..................................................
EY926124       --> ..................................................
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> ..................................................
EX767040       --> ..................................................
FD575169       --> ..................................................
EX759216       --> ..................................................

               1351   -   1401
UN19787        --> GCCCATAACTCTCTCATCCCAGCATCGACCAAGGGGTACCCGGTCCGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- ..................................................
EY941369       <-- ..................................................
EX762864       <-- GCCCATAACTCTCTCATCCCAGCATCGACCAAGGGGTACCCGGTCCGGCC
FD571324       <-- GCCCATAGCTCTCTCAc.................................
EY915633       <-- GCCCATAACTCTCTCATCCCAGCATCGACCAAGGGGCACCCGGTCCGGCC
FD554430       --> ..................................................
EY936965       --> ..................................................
EY926124       --> ..................................................
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> ..................................................
EX767040       --> ..................................................
FD575169       --> ..................................................
EX759216       --> ..................................................

               1401   -   1451
UN19787        --> TTGCCTCCACGCCTTGAAGTAGTTCTCATCAACAGCCCAAGGGAAGAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- ..................................................
EY941369       <-- ..................................................
EX762864       <-- TTGCCTCCACGCCTTGAAGTAGTTCTCATCAACAGCCCAAGGGAAGAACT
FD571324       <-- ..................................................
EY915633       <-- TTGCCTCCACGCCTTGAAGTAGTTCTCATCAACAGCCCAAGGGAAGAACT
FD554430       --> ..................................................
EY936965       --> ..................................................
EY926124       --> ..................................................
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> ..................................................
EX767040       --> ..................................................
FD575169       --> ..................................................
EX759216       --> ..................................................

               1451   -   1501
UN19787        --> TAAGATGGCCGAGGAGTGGTCTTTCATGAGAGTAGGGATGGTTGAAGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- ..................................................
EY941369       <-- ..................................................
EX762864       <-- TAAGATGGCCGAGGAGTGGTCTTTCATGAGAGTAGGGATGGTTGAAGCTT
FD571324       <-- ..................................................
EY915633       <-- TAAGATGGCCGAGGAGTGGTCTTTCATGAGAGTAGGGATGGTTGAAGCTT
FD554430       --> ..................................................
EY936965       --> ..................................................
EY926124       --> ..................................................
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> ..................................................
EX767040       --> ..................................................
FD575169       --> ..................................................
EX759216       --> ..................................................

               1501   -   1551
UN19787        --> ATGTACCTAGAGTATTCCCTGAGACCAATAGATTTGACCGCTATCCCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- ..................................................
EY941369       <-- ..................................................
EX762864       <-- ATGTACCTAGAGTc....................................
FD571324       <-- ..................................................
EY915633       <-- ATGTACCTAGAGTATTCCCTGAGACCAATAGATTTGACCGCTATCCCTTC
FD554430       --> ..................................................
EY936965       --> ..................................................
EY926124       --> ..................................................
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> ..................................................
EX767040       --> ..................................................
FD575169       --> ..................................................
EX759216       --> ..................................................

               1551   -   1601
UN19787        --> CGCTGTCAGCGTCCTTGGCACGATGATCACGGACCAAGGATAAGGGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- ..................................................
EY941369       <-- ..................................................
EX762864       <-- ..................................................
FD571324       <-- ..................................................
EY915633       <-- CGCTGTCAGCGTCCTTGGCACGATGATCACGGACCAAGGATAAGGGATCA
FD554430       --> ..................................................
EY936965       --> ..................................................
EY926124       --> ..................................................
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> ..................................................
EX767040       --> ..................................................
FD575169       --> ..................................................
EX759216       --> ..................................................

               1601   -   1651
UN19787        --> TACAAATGGTTGAAGAAGATCTGAGAAGCACCGGTGGATTTAACAACTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- ..................................................
EY941369       <-- ..................................................
EX762864       <-- ..................................................
FD571324       <-- ..................................................
EY915633       <-- TACAAATGGTTGAAGAAGATCTGAGAAGCACCGGTGGATTTAACAACTTC
FD554430       --> ..................................................
EY936965       --> ..................................................
EY926124       --> ..................................................
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> ..................................................
EX767040       --> ..................................................
FD575169       --> ..................................................
EX759216       --> ..................................................

               1651   -   1701
UN19787        --> AAGAAGAGAAGCAACACTATCAGTAGATCTCTTGGTGATGAGACAAGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- ..................................................
EY941369       <-- ..................................................
EX762864       <-- ..................................................
FD571324       <-- ..................................................
EY915633       <-- AAGAAGAGAAGCAACACTATCAGTAGATCTCTTGGTGATGAGACAAGTAC
FD554430       --> ..................................................
EY936965       --> ..................................................
EY926124       --> ..................................................
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> ..................................................
EX767040       --> ..................................................
FD575169       --> ..................................................
EX759216       --> ..................................................

               1701   -   1751
UN19787        --> CAAGGCTTCTAAGCGCAGAATCAAGCTGAGCCAAACTGTTCTTGAGCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- ..................................................
EY941369       <-- ..................................................
EX762864       <-- ..................................................
FD571324       <-- ..................................................
EY915633       <-- CAAGGCTTCTAAGCGCAGAATCAAGCTGAGCCAAACTGTTCTTGAGCCAC
FD554430       --> ..................................................
EY936965       --> ..................................................
EY926124       --> ..................................................
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> ..................................................
EX767040       --> ..................................................
FD575169       --> ..................................................
EX759216       --> ..................................................

               1751   -   1801
UN19787        --> CACCTTGAAACCCTACCAGGCTGATAGTGTCCTTCTTCCTCTGGTGCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- ..................................................
EY941369       <-- ..................................................
EX762864       <-- ..................................................
FD571324       <-- ..................................................
EY915633       <-- CACCTTGAAACCCTACCAGGCTGATAGTGTCCTTCTTCCTCTGGTGCCCA
FD554430       --> ..................................................
EY936965       --> ..................................................
EY926124       --> ..................................................
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> ..................................................
EX767040       --> ..................................................
FD575169       --> ..................................................
EX759216       --> ..................................................

               1801   -   1851
UN19787        --> TACAAACACAGCAATTACAGGTCCAGCTCTTACAGCTGCTGCTAAAGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- ..................................................
EY941369       <-- ..................................................
EX762864       <-- ..................................................
FD571324       <-- ..................................................
EY915633       <-- TACAAACACAGCAATTACAGGTCCAGCTCTTACAGCTGCTGCTAAAGCTG
FD554430       --> ..................................................
EY936965       --> ..................................................
EY926124       --> ..................................................
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> ..................................................
EX767040       --> ..................................................
FD575169       --> ..................................................
EX759216       --> ..................................................

               1851   -   1901
UN19787        --> GATTGTCTTCAACTCTTAGATCTCTTCTAAACCATACAATACTACACCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- ..................................................
EY941369       <-- ..................................................
EX762864       <-- ..................................................
FD571324       <-- ..................................................
EY915633       <-- GATTGTCTTCAACTCTTAGATCTCTTCTAAACCATACAATACTACACCCA
FD554430       --> ..................................................
EY936965       --> ..................................................
EY926124       --> ..................................................
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> ..................................................
EX767040       --> ..................................................
FD575169       --> ..................................................
EX759216       --> ..................................................

               1901   -   1951
UN19787        --> CCACCACCACCTGAACATTTATTAGACATCTCTCAAAACTAAGGCTCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- ..................................................
EX755036       <-- ..................................................
EY921510       <-- ..................................................
EY941369       <-- ..................................................
EX762864       <-- ..................................................
FD571324       <-- ..................................................
EY915633       <-- CCACCACCACCTGAACATTTATTAGACATCTCTCAAAACTAAGGCTCTTA
FD554430       --> ..................................................
EY936965       --> ..................................................
EY926124       --> ..................................................
EY911446       --> ..................................................
EY917640       --> ..................................................
FD539745       --> ..................................................
EX767040       --> ..................................................
FD575169       --> ..................................................
EX759216       --> ..................................................

               1951   -   2001
UN19787        --> TGGCTGCAGCAAACTGAATTTTTTTAATTCAATCTCTGCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY908101       <-- .........................................
EX755036       <-- .........................................
EY921510       <-- .........................................
EY941369       <-- .........................................
EX762864       <-- .........................................
FD571324       <-- .........................................
EY915633       <-- TGGCTGCAGCAAACTGAATTTTTTTAATTCAATCTCTGCCC
FD554430       --> .........................................
EY936965       --> .........................................
EY926124       --> .........................................
EY911446       --> .........................................
EY917640       --> .........................................
FD539745       --> .........................................
EX767040       --> .........................................
FD575169       --> .........................................
EX759216       --> .........................................