-1     -     49
UN19802        --> ..TTTCGTTTGAAGGTTTATTTTATATGGGAAGACATCCCATGTTCTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722786       <-- ...gatGTTTGGAGGTTTATTTTATATGGGAAGACATCCCATGTTCTTGT  Raphanus sativus cv Early Scarlet Globe
EW716098       <-- .......TTTGAAGGTTTATTTTATATGGGAAGACATCACATGTTCTTGT  Raphanus sativus var. oleiformis
FD579768       <-- ....tttTTTGAAGGTT-A-TTTATATGG-AAGACATCCCATGTTCT-GT  Raphanus sativus cv Rat-Tail Radish #3870
EY921851       <-- ....gatgTTGAAGGTTTATTT-ATATGG-AAGACATCACATGTTCT-GT  Raphanus raphanistrum subsp. landra
EX894777       <-- .........................ATGGGAAGACATCCCATGTTCTTGT  Raphanus sativus cv Early Scarlet Globe
EW716360       <-- ..................................................  Raphanus sativus var. oleiformis
EX761853       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716891       <-- ..................................................  Raphanus sativus var. oleiformis
FD965421       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD572331       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW724000       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD534696       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX763091       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY900564       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD954878       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD938687       <-- ..................................................  Raphanus sativus var. oleiformis
EX906093       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW720394       --> ..TTTCGTTTGAAGGTTTATTTTATATGGGAAGACATCACATGTTCTTGT  Raphanus sativus var. oleiformis
EW721338       --> ...TTCGTTTGAAGGTTTATTTTATATGGGAAGACATCACATGTTCTTGT  Raphanus sativus var. oleiformis
EX766242       --> ...ggtGTTTGAAGGTTTATTTTATATGGGAAGACATCCCATGTTCTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD530555       --> aaagatGTTTGAAGGTTTATTTTATATGGGAAGACATCCCATGTTCTTGT  Raphanus raphanistrum subsp. maritimus
EX769310       --> ..........GAAGGTTTATTTTATATGGGAAGACATCCCATGTTCTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899048       --> ..........GAAGGTTTATTTTATATGGGAAGACATCCCATGTTCTTGT  Raphanus sativus cv Early Scarlet Globe
EX909715       --> ..........GAAGGTTTATTTTATATGGGAAGACATCCCATGTTCTTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD583693       --> ..........GAAGGTTTATTTTATATGGGAAGACATCCCATGTTCTTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD951037       --> ..........GAAGGTTTATTTTATATGGGAAGACATCCCATGTTCTTGT  Raphanus sativus cv Rat-Tail Radish #3870
EW718548       --> ................................................GT  Raphanus sativus var. oleiformis
EW718810       --> ................................................GT  Raphanus sativus var. oleiformis
EX767231       --> ................................................GT  Raphanus raphanistrum subsp. raphanistrum (NY)
AB447963       --> ..................................................  Raphanus sativus cv Sakurajima Daikon var. niger
EW728049       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD935003       --> ..................................................  Raphanus sativus var. oleiformis

               49     -     99
UN19802        --> ACCAAATATCATCAATATTAA-GCTATTT-CAGTTCTAGTCTAATAATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722786       <-- ACCAAATATCATCAATATTAA-GCTATTT-CAGTTCTAGTCTAATAATTG
EW716098       <-- ACCAAATATCATCAATATTAA-GCTATTTTCAGTTCTAGTCTAATAATTG
FD579768       <-- ACCAAATATCATCAATATAAA-GCTATT--CAGTTCTAGTCTAATAATTG
EY921851       <-- ACCAAATATCATTAATAT-AA-GCTATTT-CAGTTCTAGTCTAATAATTG
EX894777       <-- ACCAAATATCATCAATATTAA-GCTATTT-CAGTTCTAGTCTAATAATTG
EW716360       <-- .........CATCAATAT-AA-GCTATTT-CAGTTCTAGTCTAATAATTG
EX761853       <-- .........CATCAATATAAA-GCTATT--CAG-TCTAGTCTA-TAA-TG
EW716891       <-- ................ATTAA-GCTATTTTCAGTTCTAGTCTAATAATTG
FD965421       <-- ...........................TT-CAGTTCTAGTCTAATAATTG
FD572331       <-- ..................................................
EW724000       <-- ..................................................
FD534696       <-- ..................................................
EX763091       <-- ..................................................
EY900564       <-- ..................................................
FD954878       <-- ..................................................
FD938687       <-- ..................................................
EX906093       <-- ..................................................
EW720394       --> ACCAAATATCATCAATATTAA-GCTATTTTCAGTTCTAGTCTAATAATTG
EW721338       --> ACCAAATATCATCAATATTAA-GCTATTTTCAGTTCTAGTCTAATAATTG
EX766242       --> ACCAAATATCATCAATATTAAAGCTATTT-CAGTTCTAGTCTAATAATTG
FD530555       --> ACCAAATATCATCAATATTAAAGCTATTT-CAGTTCTAGTCTAATAATTG
EX769310       --> ACCAAATATCATCAGTATTAAAGCTATTT-CAGTTCTAGTCTAATAATTG
EX899048       --> ACCAAATATCATCAATATTAA-GCTATTT-CAGTTCTAGTCTAATAATTG
EX909715       --> ACCAAATATCATCAGTATTAAAGCTATTT-CAGTTCTAGTCTAATAATTG
FD583693       --> ACCAAATATCATCAATATTAAAGCTATTT-CAGTTCTAGTCTAATAATTG
FD951037       --> ACCAAATATCATCAATATTAAAGCTATTT-CAGTTCTAGTCTAATAATTG
EW718548       --> ACCAAATATCATCAATATTAA-GCTATTTTCAGTTCTAGTCTAATAATTG
EW718810       --> ACCAAATATCATCAATATTAA-GCTATTTTCAGTTCTAGTCTAATAATTG
EX767231       --> ACCAAATATCATCAATATTAAAGCTATTT-CAGTTCTAGTCTAATAATTG
AB447963       --> ACCAAATATCATCAATATTAAAGCTATTT-CAGTTCTAGTCTAATAATTG
EW728049       --> .CCAAATATCATCAATATTAA-GCTATTT-CAGTTCTAGTCTAATAATTG
FD935003       --> ...................gA-GCTATTT-CAGTTCTAGTCTAATAATTG

               99     -    149
UN19802        --> AACCATATAGACAACATCACATAAACATA-GCACAACACAAGCTCAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722786       <-- AACCATATAGACAACATCACATAAACATA-GCACAACACAAGCTCAAGCT  Raphanus sativus cv Early Scarlet Globe
EW716098       <-- AACCATATAGACAACATCACATAAACATA-GCACAACACAAGCTCAAGCT  Raphanus sativus var. oleiformis
FD579768       <-- AACCATATAGACAACATCACATAAACATAAGCACAACACAAGCTCAAGCT  Raphanus sativus cv Rat-Tail Radish #3870
EY921851       <-- AATCATATAGACAACATCACATAAACATA-ACACAACACAAGCTCAAGCT  Raphanus raphanistrum subsp. landra
EX894777       <-- AACCATATAGACAACATCACATAAACATA-GCACAACACAAGCTCAAGCT  Raphanus sativus cv Early Scarlet Globe
EW716360       <-- AACCATATAGACAACATCACATAAACATA-GCACAACACAAGCTCAAGCT  Raphanus sativus var. oleiformis
EX761853       <-- AACCATATAGACAACATCACATAAACATAAGCACAACACAAGCTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716891       <-- AACCATATAGACAACATCACATAAACATA-GCACAACACAAGCTCAAGCT  Raphanus sativus var. oleiformis
FD965421       <-- AATCATATAGACAACATCACATAAACATA-ACACAACACAAGCTCAAGCT  Raphanus raphanistrum subsp. maritimus
FD572331       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW724000       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD534696       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX763091       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY900564       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD954878       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD938687       <-- ..................................................  Raphanus sativus var. oleiformis
EX906093       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW720394       --> AACCATATAGACAACATCACATAAACATA-GCACAACACAAGCTCAAGCT  Raphanus sativus var. oleiformis
EW721338       --> AACCATATAGACAACATCACATAAACATA-GCACAACACAAGCTCAAGCT  Raphanus sativus var. oleiformis
EX766242       --> AACCATATAGACAACATCACATAAACATAAGCACAACACAAGCTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD530555       --> AACCATATAGACAACATCACATAAACATAAGCACAACACAAGCTCAAGCT  Raphanus raphanistrum subsp. maritimus
EX769310       --> AACCATATAGACAACATCACATAAACATAAGCACAACACAAGCTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899048       --> AACCATATAGACAACATCACATAAACATA-GCACAACACAAGCTCAAGCT  Raphanus sativus cv Early Scarlet Globe
EX909715       --> AACCATATAGACAACATCACATAAACATAAGCACAACACAAGCTCAAGCT  Raphanus sativus cv Rat-Tail Radish #3870
FD583693       --> AACCATATAGACAACATCACATAAACATAAGCACAACACAAGCTCAAGCT  Raphanus sativus cv Rat-Tail Radish #3870
FD951037       --> AACCATATAGACAACATCACATAAACATAAGCACAACACAAGCTCAAGCT  Raphanus sativus cv Rat-Tail Radish #3870
EW718548       --> AACCATATAGACAATATCACATAAACATA-GCACAACACAAGCTCAAGCT  Raphanus sativus var. oleiformis
EW718810       --> AACCATATAGACAATATCACATAAACATA-GCACAACACAAGCTCAAGCT  Raphanus sativus var. oleiformis
EX767231       --> AACCATATAGACAACATCACATAAACATAAGCACAACACAAGCTCAAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
AB447963       --> AACCATATAGACAACATCACATAAACATAAGCACAACACAAGCTCAAGCT  Raphanus sativus cv Sakurajima Daikon var. niger
EW728049       --> AACCATATAGACAACATCACATAAACATA-GCACAACACAAGCTCAAGCT  Raphanus sativus cv Early Scarlet Globe
FD935003       --> AACCATATAGACAACATCACATAAACATA-GCACAACACAAGCTCAAGCT  Raphanus sativus var. oleiformis

               149    -    199
UN19802        --> TTGCAGGAACCAAGAACCTTCTTGGTATCTGTTGACTTAAGCGACCCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722786       <-- TTGCAGGAACCAAGAACCTTCTTGGTATCTGTTGACTTAAGCGACCCTTT  Raphanus sativus cv Early Scarlet Globe
EW716098       <-- TTGCAGGAACCAAGAACCTTCTTGGTATCTGTTGGCTTAAGCGACCCTTT  Raphanus sativus var. oleiformis
FD579768       <-- TTGCAGGAACCAAGAACCTTCTTGGTCTCTGTTGACTTAAGCGACCCTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY921851       <-- TTGCAGGAACCAAGAACTTTCTTGGTATCTGTTGACTTAAGCGACCCTTT  Raphanus raphanistrum subsp. landra
EX894777       <-- TTGCAGGAACCAAGAACTTTCTTGGTATCTGTTGACATAAGCGACCCTTT  Raphanus sativus cv Early Scarlet Globe
EW716360       <-- TTGCAGGAACCAAGAAC-TTCTTGGTATCTGTTGACTTAAGCAACCCTTT  Raphanus sativus var. oleiformis
EX761853       <-- T-GCAGGA-CCAAGAAC-TTCTTGGTCTCTGTTGACTTAAGCGACCCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716891       <-- TTGCAGGAACCAAGAACCTTCTTGGTATCTGTTGACTTAAGCGACCCTTT  Raphanus sativus var. oleiformis
FD965421       <-- TTGCAGGAACCAAGAACTTTCTTGGTATCTGTTGACTTAAGCGACCCTTT  Raphanus raphanistrum subsp. maritimus
FD572331       <-- ....AGGAACCAAGAACCTTCTTGGTATCTGTTGACTTAAGCGACCCTTT  Raphanus sativus cv Early Scarlet Globe
EW724000       <-- .............................TGTTGACATAAGCGACCCTTT  Raphanus sativus cv Early Scarlet Globe
FD534696       <-- .................................................T  Raphanus raphanistrum subsp. maritimus
EX763091       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY900564       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD954878       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD938687       <-- ..................................................  Raphanus sativus var. oleiformis
EX906093       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW720394       --> TTGCAGGAACCAAGAACCTTCTTGGTATCTGTTGGCTTAAGCGACCCTTT  Raphanus sativus var. oleiformis
EW721338       --> TTGCAGGAACCAAGAACCTTCTTGGTATCTGTTGACTTAAGCGACCCTTT  Raphanus sativus var. oleiformis
EX766242       --> TTGCAGGAACCAAGAACCTTCTTGGTCTCTGTTGACTTAAGCGACCCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD530555       --> TTGCAGGAACCAAGAACCTTCTTGGTCTCTGTTGACTTAAGCGACCCTTT  Raphanus raphanistrum subsp. maritimus
EX769310       --> TTGCAGGAACCAAGAACCTTCTTGGTCTCTGTTGACTTAAGCGACCCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899048       --> TTGCAGGAACCAAGAACCTTCTTGGTATCTGTTGACATAAGCGACCCTTT  Raphanus sativus cv Early Scarlet Globe
EX909715       --> TTGCAGGAACCAAGAACCTTCTTGGTCTCTGTTGACTTAAGCGACCCTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD583693       --> TTGCAGGAACCAAGAACCTTCTTGGTCTCTGTTGACTTAAGCGACCCTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD951037       --> TTGCAGGAACCAAGAACCTTCTTGGTCTCTGTTGACTTAAGCGACCCTTT  Raphanus sativus cv Rat-Tail Radish #3870
EW718548       --> TTGCAGGAACCAAGAACCTTCTTGGTATCTGTTGACTTCAGCGACCCTTT  Raphanus sativus var. oleiformis
EW718810       --> TTGCAGGAACCAAGAACCTTCTTGGTATCTGTTGACTTCAGCGACCCTTT  Raphanus sativus var. oleiformis
EX767231       --> TTGCAGGAACCAAGAACCTTCTTGGTCTCTGTTGACTTAAGCGACCCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
AB447963       --> TTGCAGGAACCAAGAACCTTCTTGGTCTCTGTTGACTTAAGCGACCCTTT  Raphanus sativus cv Sakurajima Daikon var. niger
EW728049       --> TTGCAGGAACCAAGAACCTTCTTGGTATCTGTTGACATAAGCGACCCTTT  Raphanus sativus cv Early Scarlet Globe
FD935003       --> TTGCAGGAACCAAGAACCTTCTTGGTATCTGTTGACTTAAGCGACCCTTT  Raphanus sativus var. oleiformis

               199    -    249
UN19802        --> CCTTTGACTTGAAGTCTGAGTGAATACTAGTGGGTGACTTTGCGGTCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722786       <-- CCTTTGAATTGAAGTCTGAGTGAATACTAGTGGGTGACTTTGCGGTCGGA  Raphanus sativus cv Early Scarlet Globe
EW716098       <-- CCTTTGACTTGAAGTCTGAGTGAATACTAGTGGGTGACTTTGCGGTCGGA  Raphanus sativus var. oleiformis
FD579768       <-- CCTTTGACTTGAAGTCTGAGTGAATACTCGTGGGTGACTTTGCGGTCGGA  Raphanus sativus cv Rat-Tail Radish #3870
EY921851       <-- CCTTTGACTTGAAGTCTGAGTGCATACTAGTGGGTGACTTTGCAGTCGGA  Raphanus raphanistrum subsp. landra
EX894777       <-- CCTTTGACTTGAAGTCTGAGTGAATACTAGTGGGTGACTTTGCGGTCGGA  Raphanus sativus cv Early Scarlet Globe
EW716360       <-- CCTTTGACTTGAAGTCTGAGTGAATACTAGTGGGTGACTTTGCGGTCGGA  Raphanus sativus var. oleiformis
EX761853       <-- CCTTTGACTTGAAGTCTGAGTGAATACTCGTGGGTGACTTTGCGGTCGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716891       <-- CCTTTGACTTGAAGTCTGAGTGAATACTAGTGGGTGACTTTGCGGTCGGA  Raphanus sativus var. oleiformis
FD965421       <-- CCTTTGACTTGAAGTCTGAGTGCATACTAGTGGGTGACTTTGCAGTCGGA  Raphanus raphanistrum subsp. maritimus
FD572331       <-- CCTTTGACTTGAAGTCTGAGTGAATACTAGTGGGTGACTTTGCGGTCGGA  Raphanus sativus cv Early Scarlet Globe
EW724000       <-- CCTTTGACTTGAAGTCTGAGTGAATACTAGTGGGTGACTTTGCGGTCGGA  Raphanus sativus cv Early Scarlet Globe
FD534696       <-- CCTTTGACTTGAAGTCTGAGTGAATACTCGTGGGTGACTTTGCGGTCGGA  Raphanus raphanistrum subsp. maritimus
EX763091       <-- ....TGACTTGAAGTCTGAGTGAATACTCGTGGGTGACTTTGCGGTCGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY900564       <-- .....GACTTGAAGTCTGAGTGAATACTAGTGGGCGACTTTGCGGTCGGA  Raphanus raphanistrum subsp. maritimus
FD954878       <-- ..............................TGGGTGACTTTGCGGTCGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD938687       <-- ............................................GTCGGA  Raphanus sativus var. oleiformis
EX906093       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW720394       --> CCTTTGACTTGAAGTCTGAGTGAATACTAGTGGGTGACTTTGCGGTCGGA  Raphanus sativus var. oleiformis
EW721338       --> CCTTTGACTTGAAGTCTGAGTGAATACTAGTGGGTGACTTTGCGGTCGGA  Raphanus sativus var. oleiformis
EX766242       --> CCTTTGACTTGAAGTCTGAGTGAATACTCGTGGGTGACTTTGCGGTCGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD530555       --> CCTTTGACTTGAAGTCTGAGTGAATACTCGTGGGTGACTTTGCGGTCGGA  Raphanus raphanistrum subsp. maritimus
EX769310       --> CCTTTGACTTGAAGTCTGAGTGAATACTCGTGGGTGACTTTGCGGTCGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899048       --> CCTTTGACTTGAAGTCTGAGTGAATACTAGTGGGTGACTTTGCGGTCGGA  Raphanus sativus cv Early Scarlet Globe
EX909715       --> CCTTTGACTTGAAGTCTGAGTGAATACTCGTGGGTGACTTTGCGGTCGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD583693       --> CCTTTGACTTGAAGTCTGAGTGAATACTCGTGGGTGACTTTGCGGTCGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD951037       --> CCTTTGACTTGAAGTCTGAGTGAATACTCGTGGGTGACTTTGCGGTCGGA  Raphanus sativus cv Rat-Tail Radish #3870
EW718548       --> CCTTTGACTTGAAGTCTGAGTGAATACTAGTGGGTGACTTTGCGGTCGGA  Raphanus sativus var. oleiformis
EW718810       --> CCTTTGACTTGAAGTCTGAGTGAATACTAGTGGGTGACTTTGCGGTCGGA  Raphanus sativus var. oleiformis
EX767231       --> CCTTTGACTTGAAGTCTGAGTGAATACTCGTGGGTGACTTTGCGGTCGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
AB447963       --> CCTTTGACTTGAAGTCTGAGTGAATACTCGTGGGTGACTTTGCGGTCGGA  Raphanus sativus cv Sakurajima Daikon var. niger
EW728049       --> CCTTTGACTTGAAGTCTGAGTGAATACTAGTGGGTGACTTTGCGGTCGGA  Raphanus sativus cv Early Scarlet Globe
FD935003       --> CCTTTGACTTGAAGTCTGAGTGAATACTAGTGGGTGACTTTGCGGTCGGA  Raphanus sativus var. oleiformis

               249    -    299
UN19802        --> GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722786       <-- GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
EW716098       <-- GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
FD579768       <-- GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
EY921851       <-- GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
EX894777       <-- GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
EW716360       <-- GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
EX761853       <-- GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
EW716891       <-- GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAACCATGGTAGAAAC
FD965421       <-- GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
FD572331       <-- GAAACA------GAGCTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
EW724000       <-- GAAACAGAGCTGAATTTACGGGACAAGGGATTTTGAAACATGGTAGAAAC
FD534696       <-- GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
EX763091       <-- GAAACAGAGCTGAATTTACGG-ACAAGG-ATATTGAAACATGGTAGAAAC
EY900564       <-- GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
FD954878       <-- GAAACAGAGCTGAATTTATGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
FD938687       <-- GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
EX906093       <-- ..................................................
EW720394       --> GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
EW721338       --> GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAACCATGGTAGAAAC
EX766242       --> GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
FD530555       --> GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
EX769310       --> GAAACAGAGCTGATTTTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
EX899048       --> GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
EX909715       --> GAAACAGAGCTGATTTTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
FD583693       --> GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
FD951037       --> GAAACAGAGCTGAATTTATGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
EW718548       --> GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
EW718810       --> GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
EX767231       --> GAAACAGAGCTGAATTTACGG-ACAAGG-ATATTGAAACATGGTAGAAAC
AB447963       --> GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAAACATGGT......
EW728049       --> GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC
FD935003       --> GAAACAGAGCTGAATTTACGG-ACAAGG-ATTTTGAAACATGGTAGAAAC

               299    -    349
UN19802        --> AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTATGAGCCACCCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722786       <-- AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTATGAGCCACCCTAG  Raphanus sativus cv Early Scarlet Globe
EW716098       <-- AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTATGAGCCACCCTAG  Raphanus sativus var. oleiformis
FD579768       <-- AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTACGAGCCACCCTAG  Raphanus sativus cv Rat-Tail Radish #3870
EY921851       <-- AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTATGAGCCACCCTAG  Raphanus raphanistrum subsp. landra
EX894777       <-- AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTATGAGCCACCCTAG  Raphanus sativus cv Early Scarlet Globe
EW716360       <-- AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTATGGGCCACCCTAG  Raphanus sativus var. oleiformis
EX761853       <-- AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTACGAGCCACCCTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716891       <-- AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTATGAGCCACCCTAG  Raphanus sativus var. oleiformis
FD965421       <-- AGGACGTACAGTCCAACGACCACAAATGGGGTCGCTATGAGCCACCCTAG  Raphanus raphanistrum subsp. maritimus
FD572331       <-- AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTATGAGCCACCCTAG  Raphanus sativus cv Early Scarlet Globe
EW724000       <-- AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTATGAGCCACCCTAG  Raphanus sativus cv Early Scarlet Globe
FD534696       <-- AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTACGAGCCACCCTAG  Raphanus raphanistrum subsp. maritimus
EX763091       <-- AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTACGAGCCACCCTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY900564       <-- AGAATGTACAGTCCAACGACCACAAATGGGGTCGCTATGAGCCACCCTAG  Raphanus raphanistrum subsp. maritimus
FD954878       <-- AGGATGTACAGTCCAACGACCACAAATGGGGTCGTTACGAGCCACCCTAG  Raphanus sativus cv Rat-Tail Radish #3870
FD938687       <-- AGGATGTACAGTCCAACGACCACAAATGGTGTCGCTATGAGCCACCCTAG  Raphanus sativus var. oleiformis
EX906093       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW720394       --> AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTATGAGCCACCCTAG  Raphanus sativus var. oleiformis
EW721338       --> AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTATGAGCCACCCTAG  Raphanus sativus var. oleiformis
EX766242       --> AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTACGAGCCACCCTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD530555       --> AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTACGAGCCACCCTAG  Raphanus raphanistrum subsp. maritimus
EX769310       --> AGGGTGTACAGTCCAACGACCACAAATGGGGTCGCTACGAGCCACCCTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899048       --> AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTATGAGCCACCCTAG  Raphanus sativus cv Early Scarlet Globe
EX909715       --> AGGGTGTACAGTCCAACGACCACAAATGGGGTCGCTACGAGCCACCCTAG  Raphanus sativus cv Rat-Tail Radish #3870
FD583693       --> AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTACGAGCCACCCTAG  Raphanus sativus cv Rat-Tail Radish #3870
FD951037       --> AGGATGTACAGTCCAACGACCACAAATGGGGTCGTTACGAGCCACCCTAG  Raphanus sativus cv Rat-Tail Radish #3870
EW718548       --> AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTATGAGCCACCCTAG  Raphanus sativus var. oleiformis
EW718810       --> AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTATGAGCCACCCTAG  Raphanus sativus var. oleiformis
EX767231       --> AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTACGAGCCACCCTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
AB447963       --> ..................................................  Raphanus sativus cv Sakurajima Daikon var. niger
EW728049       --> AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTATGAGCCACCCTAG  Raphanus sativus cv Early Scarlet Globe
FD935003       --> AGGATGTACAGTCCAACGACCACAAATGGGGTCGCTATGAGCCACCCTAG  Raphanus sativus var. oleiformis

               349    -    399
UN19802        --> TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722786       <-- TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
EW716098       <-- TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
FD579768       <-- TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
EY921851       <-- TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
EX894777       <-- TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
EW716360       <-- TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
EX761853       <-- TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
EW716891       <-- TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
FD965421       <-- TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
FD572331       <-- TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
EW724000       <-- TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
FD534696       <-- TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
EX763091       <-- TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
EY900564       <-- TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
FD954878       <-- TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
FD938687       <-- TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
EX906093       <-- ..................................................
EW720394       --> TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
EW721338       --> TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
EX766242       --> TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
FD530555       --> TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
EX769310       --> TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
EX899048       --> TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
EX909715       --> TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
FD583693       --> TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
FD951037       --> TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
EW718548       --> TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
EW718810       --> TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
EX767231       --> TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
AB447963       --> ..................................................
EW728049       --> TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA
FD935003       --> TAGCGCATTACCAATGCTTAAAAAGACTTCTCTGGAAGCTTGGCCTGTGA

               399    -    449
UN19802        --> AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722786       <-- AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
EW716098       <-- AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
FD579768       <-- AAAC-CTTCTTTAGAGCATTGGTCGTTAGAGGAAAATGAGGTCCACCGGT
EY921851       <-- AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
EX894777       <-- AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
EW716360       <-- AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
EX761853       <-- AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
EW716891       <-- AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
FD965421       <-- AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
FD572331       <-- AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
EW724000       <-- AAACTCTTCTTTAGAGCATCGGTCGTTAGAG...................
FD534696       <-- AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
EX763091       <-- AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
EY900564       <-- AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
FD954878       <-- AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
FD938687       <-- AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
EX906093       <-- ..................................................
EW720394       --> AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
EW721338       --> AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
EX766242       --> AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
FD530555       --> AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
EX769310       --> AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
EX899048       --> AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
EX909715       --> AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
FD583693       --> AAAC-CTTCTTTAGAGCATTGGTCGTTAGAGGAAAATGAGGTCCACCGGT
FD951037       --> AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
EW718548       --> AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
EW718810       --> AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
EX767231       --> AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
AB447963       --> ..................................................
EW728049       --> AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT
FD935003       --> AAAC-CTTCTTTAGAGCATCGGTCGTTAGAGGAAAATGAGGTCCACCGGT

               449    -    499
UN19802        --> TAGTTTTTCGCCAAGACGTAAGAAAGGCACCATAAGACTTAGTTCAATAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722786       <-- TAGTTTTTCGCCAAGACGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus sativus cv Early Scarlet Globe
EW716098       <-- TAGTTTTTCGCCAAGACGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus sativus var. oleiformis
FD579768       <-- TAGTTTTTCGCCAAGCCGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus sativus cv Rat-Tail Radish #3870
EY921851       <-- TAGTTTTTCGCCAAGCCGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus raphanistrum subsp. landra
EX894777       <-- TAGTTTTTCGCCAAGACGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus sativus cv Early Scarlet Globe
EW716360       <-- TAGTTTTTCGCCAAGACGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus sativus var. oleiformis
EX761853       <-- TAGTTTTTCGCCAAGACGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716891       <-- TAGTTTTTCGCCAAGACGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus sativus var. oleiformis
FD965421       <-- TAGTTTTTCGCCAAGCCGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus raphanistrum subsp. maritimus
FD572331       <-- TAGTTTTTCGCCAAGACGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus sativus cv Early Scarlet Globe
EW724000       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD534696       <-- TAGTTTTTCGCCAAGCCGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus raphanistrum subsp. maritimus
EX763091       <-- TAGTTTTTCGCCAAGACGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY900564       <-- TAGTTTTTCGCCAAGCCGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus raphanistrum subsp. maritimus
FD954878       <-- TAGTTTTTCGCCAAGCCGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus sativus cv Rat-Tail Radish #3870
FD938687       <-- TAGTTTTTCGCCAAGCCGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus sativus var. oleiformis
EX906093       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW720394       --> TAGTTTTTCGCCAAGACGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus sativus var. oleiformis
EW721338       --> TAGTTTTTCGCCAAGACGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus sativus var. oleiformis
EX766242       --> TAGTTTTTCGCCAAGACGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD530555       --> TAGTTTTTCGCCAAGCCGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus raphanistrum subsp. maritimus
EX769310       --> TAGTTTTTCGCCAAGCCGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899048       --> TAGTTTTTCGCCAAGACGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus sativus cv Early Scarlet Globe
EX909715       --> TAGTTTTTCGCCAAGCCGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus sativus cv Rat-Tail Radish #3870
FD583693       --> TAGTTTTTCGCCAAGCCGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus sativus cv Rat-Tail Radish #3870
FD951037       --> TAGTTTTTCGCCAAGCCGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus sativus cv Rat-Tail Radish #3870
EW718548       --> TAGTTTTTCGCCAAGACGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus sativus var. oleiformis
EW718810       --> TAGTTTTTCGCCAAGACGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus sativus var. oleiformis
EX767231       --> TAGTTTTTCGCCAAGACGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus raphanistrum subsp. raphanistrum (NY)
AB447963       --> ..................................................  Raphanus sativus cv Sakurajima Daikon var. niger
EW728049       --> TAGTTTTTCGCCAAGACGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus sativus cv Early Scarlet Globe
FD935003       --> TAGTTTTTCGCCAAGCCGTAAGAAAGGCACCATAAGACTTAGTTCAATAG  Raphanus sativus var. oleiformis

               499    -    549
UN19802        --> GAGTGGCAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722786       <-- GAGTAGCAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus sativus cv Early Scarlet Globe
EW716098       <-- GAGTGGTAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus sativus var. oleiformis
FD579768       <-- GAGTGGCGAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY921851       <-- GAGTAGCAATGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus raphanistrum subsp. landra
EX894777       <-- GAGTAGCAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus sativus cv Early Scarlet Globe
EW716360       <-- GAGTGGCAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus sativus var. oleiformis
EX761853       <-- GAGTGGCAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716891       <-- GAGTGGCAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus sativus var. oleiformis
FD965421       <-- GAGTAGCAATGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus raphanistrum subsp. maritimus
FD572331       <-- GAGTAGCAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus sativus cv Early Scarlet Globe
EW724000       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD534696       <-- GAGTGGCAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus raphanistrum subsp. maritimus
EX763091       <-- GAGTGGCAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY900564       <-- GAGTAGCAATGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus raphanistrum subsp. maritimus
FD954878       <-- GAGTGGCAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD938687       <-- GAGTAGCAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus sativus var. oleiformis
EX906093       <-- .........................GACAGTTGGAGCATGACAAAGAGAT  Raphanus sativus cv Rat-Tail Radish #3870
EW720394       --> GAGTGGTAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus sativus var. oleiformis
EW721338       --> GAGTGGCAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus sativus var. oleiformis
EX766242       --> GAGTGGCAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD530555       --> GAGTGGCAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus raphanistrum subsp. maritimus
EX769310       --> GAGTGGCAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899048       --> GAGTAGCAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus sativus cv Early Scarlet Globe
EX909715       --> GAGTGGCAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD583693       --> GAGTGGCGAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD951037       --> GAGTGGCAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus sativus cv Rat-Tail Radish #3870
EW718548       --> GAGTGGCAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus sativus var. oleiformis
EW718810       --> GAGTGGCAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus sativus var. oleiformis
EX767231       --> GAGTGGCAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
AB447963       --> ..................................................  Raphanus sativus cv Sakurajima Daikon var. niger
EW728049       --> GAGTAGCAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGA...  Raphanus sativus cv Early Scarlet Globe
FD935003       --> GAGTAGCAAGGAAGTTAAACAACATGACAGTTGGAGCATGACAAAGAGAT  Raphanus sativus var. oleiformis

               549    -    599
UN19802        --> CCAAGCGACGCAATAGCTACTCCACACAGCAACACGGTAACACCACAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722786       <-- CCAAGCGACGCAATAGCTACTCCACACAGCAACACGGTAACACCACAGAT
EW716098       <-- CCAAGCGAGGCAATAGCTACTCCACACAGCAACACCGTAACACCACAGAT
FD579768       <-- CCAAGCGACGCAATAGCTACTCCACACAGCAACACGGTAACACCACAGAT
EY921851       <-- CCAAGCGACGCAATAGCTACTCCACACAGCAACACCGTAACACCACAGAT
EX894777       <-- CCAAGCGACGCAATAGCTACTCCACACAGCAACACGGTAACACCACAGAT
EW716360       <-- CCAAGCGAGGCAATAGCTACTCCACACAGCAACACCGTAACACCACAGAT
EX761853       <-- CCAAGCGAGGCAATTGCTACTCCACACAGCAACACCGTAACACCACAGAT
EW716891       <-- CCAAGCGAGGCAATAGCTACTCCACACAGCAACACCGTAACACCACAGAT
FD965421       <-- CCAAGCGACGCAATAGCTACTCCACACAGCAACACCGTAACACCACAGAT
FD572331       <-- CCAAGCGACGCAATAGCTACTCCACACAGCAACACGGTAACACCACAGAT
EW724000       <-- ..................................................
FD534696       <-- CCAAGCGACGCAATAGCTACTCCACACAGCAACACGGTAACACCACAGAT
EX763091       <-- CCAAGCGAGGCAATAGCTACTCCACACAGCAACACCGTAACACCACAGAT
EY900564       <-- CCAAGCGACGCAATAGCTACTCCACACAGCAACACCGTAACACCACAGAT
FD954878       <-- CCAAGCGACGCAATGGCTACTCCACACAGCAACACGGTAACACCACAGAT
FD938687       <-- CCAAGCGACGCAATAGCTACTCCACACAGCAACACGGTAACACCACAGAT
EX906093       <-- CCAAGCGACGCAATAGCTACTCCACACAGCAACACGGTAACACCACAGAT
EW720394       --> CCAAGCGAGGCAATAGCTACTCCACACAGCAACACCGTAACACCACAGAT
EW721338       --> CCAAGCGAGGCAATAGCTACTCCACACAGCAACACCGTAACACCACAGAT
EX766242       --> CCAAGCGAGGCAATTGCTACTCCACACAGCAACACCGTAACACCACAGAT
FD530555       --> CCAAGCGACGCAATAGCTACTCCACACAGCAACACGGTAACACCACAGAT
EX769310       --> CCAAGCGACGCAATAGCTACTCCACACAGCAACACGGTAACACCACAGAT
EX899048       --> CCAAGCGACGCAATAGCTACTCCACACAGCAACACGGTAACACCACAGAT
EX909715       --> CCAAGCGACGCAATAGCTACTCCACACAGCAACACGGTAACACCACAGAT
FD583693       --> CCAAGCGACGCAATAGCTACTCCACACAGCAACACGGTAACACCACAGAT
FD951037       --> CCAAGCGACGCAATGGCTACTCCACACAGCAACACGGTAACACCACAGAT
EW718548       --> CCAAGCGAGGCAATAGCTACTCCACACAGCAACACCGTAACACCACAGAT
EW718810       --> CCAAGCGAGGCAATAGCTACTCCACACAGCAACACCGTAACACCACAGAT
EX767231       --> CCAAGCGAGGCAATAGCTACTCCACACAGCAACACCGTAACACCACAGAT
AB447963       --> ..................................................
EW728049       --> ..................................................
FD935003       --> CCAAGCGACGCAATAGCTACTCCACACAGCAACACGGTAACACCACAGAT

               599    -    649
UN19802        --> TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAGAAAGCCAGCTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722786       <-- TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAGAAAGCCAGCTGCT
EW716098       <-- TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAGAAAGCCAGCTGCT
FD579768       <-- TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAGAAAGCCAGCTGCT
EY921851       <-- TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAGAAAGCCAGCTGCT
EX894777       <-- TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAGAAAGCCAGCTGCT
EW716360       <-- TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAGAAAGCCAGCTGCT
EX761853       <-- TGGAAATACTCCCATGGTAACGCCCAATACAGCAGAGAAAGCCAGCTGCT
EW716891       <-- TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAGAAAGCCAGCTGCT
FD965421       <-- TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAGAAAGCCAGCTGCT
FD572331       <-- TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAGAAAGCCAGCTGCT
EW724000       <-- ..................................................
FD534696       <-- TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAGAAAGCCAGCTGCT
EX763091       <-- TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAGAAAGCCAGCTGCT
EY900564       <-- TGGAAATACTCCCATGGTAAAGCCCAATGCAGCAGAGAAAGCCAGCTGCT
FD954878       <-- TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAGAAAGCCAGCTGCT
FD938687       <-- TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAGAAAGCCAGCTGCT
EX906093       <-- TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAGAAAGCCAGCTGCT
EW720394       --> TGGAAATACTCCCATGGTAACGCCCAATGCAGCAAAGAAAGCCAGCTGCT
EW721338       --> TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAGAAAGCCAGCTGCT
EX766242       --> TGGAAATACTCCCATGGTAACGCCCAATACAGCAGAGAAAGCCAGCTGCT
FD530555       --> TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAGAAAGCCAGCTGCT
EX769310       --> TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAGAAAGCCAGCTGCT
EX899048       --> TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAGAAAGCCAGCTGCT
EX909715       --> TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAGAAAGCCAGCTGCT
FD583693       --> TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAGAAAGCCAGCTGCT
FD951037       --> TGGAAATACTCCCATGGTAACGCCCAAT......................
EW718548       --> TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAGAAAGCCAGCTGCT
EW718810       --> TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAGAAAGCCAGCTGCT
EX767231       --> TGGAAATACTCCCATGGTAACGCCCAATGCAGCAGAAAAAGCCAGCTGCT
AB447963       --> ..................................................
EW728049       --> ..................................................
FD935003       --> TGGAAATACTCCCATGGTAACGCCCAATGC....................

               649    -    699
UN19802        --> TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722786       <-- TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
EW716098       <-- TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGCTCGGTGATTTTC
FD579768       <-- TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
EY921851       <-- TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
EX894777       <-- TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
EW716360       <-- TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
EX761853       <-- TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
EW716891       <-- TTGGCTCAGCACC--TGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
FD965421       <-- TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
FD572331       <-- TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
EW724000       <-- ..................................................
FD534696       <-- TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
EX763091       <-- TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
EY900564       <-- TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
FD954878       <-- TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
FD938687       <-- TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
EX906093       <-- TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
EW720394       --> TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGCTCGGTGATTTTC
EW721338       --> TTGGCTCAGCACCT--GCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
EX766242       --> TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
FD530555       --> TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
EX769310       --> TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
EX899048       --> TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
EX909715       --> TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
FD583693       --> TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
FD951037       --> ..................................................
EW718548       --> TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
EW718810       --> TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
EX767231       --> TTGGCTCAGCACCTCTGCGCAGGATCTGGACAAGAGGTTCGGTGATTTTC
AB447963       --> ..................................................
EW728049       --> ..................................................
FD935003       --> ..................................................

               699    -    749
UN19802        --> TTTTCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCACGATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722786       <-- TTATCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCACGATTA  Raphanus sativus cv Early Scarlet Globe
EW716098       <-- TTTTCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCACGATTA  Raphanus sativus var. oleiformis
FD579768       <-- TTTTCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCACGATTA  Raphanus sativus cv Rat-Tail Radish #3870
EY921851       <-- TTTTCGAACCAAACTTTCAATCTAACTAT-GGAGATCGCCATCACGATTA  Raphanus raphanistrum subsp. landra
EX894777       <-- TTATCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCACGATTA  Raphanus sativus cv Early Scarlet Globe
EW716360       <-- TTTTCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCACGATTA  Raphanus sativus var. oleiformis
EX761853       <-- TTATCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCACGATTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716891       <-- TTATCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCACGATTA  Raphanus sativus var. oleiformis
FD965421       <-- TTTTCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCACGATTA  Raphanus raphanistrum subsp. maritimus
FD572331       <-- TTATCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCACGATTA  Raphanus sativus cv Early Scarlet Globe
EW724000       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD534696       <-- TTTTCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCACGATTA  Raphanus raphanistrum subsp. maritimus
EX763091       <-- TTATCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCACGATTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY900564       <-- TTTTCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCACGATTA  Raphanus raphanistrum subsp. maritimus
FD954878       <-- TTTTCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCACGATTA  Raphanus sativus cv Rat-Tail Radish #3870
FD938687       <-- TTATCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCACGATTA  Raphanus sativus var. oleiformis
EX906093       <-- TTTTCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCACGATTA  Raphanus sativus cv Rat-Tail Radish #3870
EW720394       --> TTTTCGAACCAAACTTTCAATCTAACTTTTGGAGATCGCCATCACGATTA  Raphanus sativus var. oleiformis
EW721338       --> TTATCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCACGATTA  Raphanus sativus var. oleiformis
EX766242       --> TTATCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCACGATTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD530555       --> TTTTCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCA......  Raphanus raphanistrum subsp. maritimus
EX769310       --> TTTTCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCACGATTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899048       --> TTa...............................................  Raphanus sativus cv Early Scarlet Globe
EX909715       --> TTTTCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCACGAT-A  Raphanus sativus cv Rat-Tail Radish #3870
FD583693       --> TTTT..............................................  Raphanus sativus cv Rat-Tail Radish #3870
FD951037       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW718548       --> TTTTCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCACGATTA  Raphanus sativus var. oleiformis
EW718810       --> TTTTCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCACGATTA  Raphanus sativus var. oleiformis
EX767231       --> TTATCGAACCAAACTTTCAATCTAACTTT-GGAGATCGCCATCACGATTA  Raphanus raphanistrum subsp. raphanistrum (NY)
AB447963       --> ..................................................  Raphanus sativus cv Sakurajima Daikon var. niger
EW728049       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD935003       --> ..................................................  Raphanus sativus var. oleiformis

               749    -    799
UN19802        --> CTCTTCGGATAAAGATTTGATAATGTTCTCTCAGTTAAGTAAAACCTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722786       <-- CTCTTTGGATAAAGATTTGATAATGTTCTCTCAGTTAAGTAAAACCTGAA
EW716098       <-- CTCTTCGGATAAAGATTTGATAATGTTCTCTCAGTTAAGTAAAACCTGAA
FD579768       <-- CTCTTTGGATAAAGATTTGATAATGTTCTCTCcc................
EY921851       <-- CTCTTCGGATc.......................................
EX894777       <-- CTCTTTGGATAAAGATTTGATAATGTTCTCcc..................
EW716360       <-- CTCTTCGGATAAAGATTTGATAATGTTCTCTCAGTTAAGTAAAACCTGAA
EX761853       <-- CTCTTCGGATAAAGATTTGATAATGTTCTCTCAGTTAAGTAAAACCTGAA
EW716891       <-- CTCTTCGGATAAAGATTTGATAATGTTCTCTCAGTTAAGTAAAACCTGAA
FD965421       <-- CTCTTCGGATAAAGATTTGATAATcc........................
FD572331       <-- CTCTTTGGATAAAGATTTGATAATGTTCTCTCAGTTAAGTAAAACCTGAA
EW724000       <-- ..................................................
FD534696       <-- CTCTTTGGATAAAGATTTGATAATGTTCTCTCAGTTAAGTAAAACCTGAA
EX763091       <-- CTCTTCGGATAAAGATTTGATAATGTTCTCTCAGTTAAGTAAAACCTGAA
EY900564       <-- CTCTTCGGATAAAGATTTGATAATGTTCTCTCAGTTAAGTAAAACCTGAA
FD954878       <-- CTCTTTGGATAAAGATTTGATAATGTTCTCTCcc................
FD938687       <-- CTCTTTGGATAAAGATTTGATAATGTTCTCTCAGTTAAGTAAAACCTGAA
EX906093       <-- CTCTTTGGATcc......................................
EW720394       --> CTCTTCGGATAAAGATTTGATAATGTTCTCTCAGTTAAGTAAAACCTGAA
EW721338       --> CTCTTCGGATAAAGATTTGATAATGTTCTCTCAGTTAAGTAAAACCTGAA
EX766242       --> CTCTTCGGATAAAGATTTGATAATGTTCTCTCAGTTAAG...........
FD530555       --> ..................................................
EX769310       --> CTCTTTGGATcc......................................
EX899048       --> ..................................................
EX909715       --> CTCTTTGGATcc......................................
FD583693       --> ..................................................
FD951037       --> ..................................................
EW718548       --> CTCTTCGGATAAAGATTTGATAATGTTCTCTCAGTTAAGTAAAACCTGAA
EW718810       --> CTCTTCGGATAAAGATTTGATAATGTTCTCTCAGTTAAGTAAAACCTGAA
EX767231       --> CTCTTCGGATAAAGATTTGATAATGTTCTCTCAGTTAAGTAAA-CCTGAA
AB447963       --> ..................................................
EW728049       --> ..................................................
FD935003       --> ..................................................

               799    -    849
UN19802        --> CAAACTC-TAATGTC----C-CAAATCCGCTTTCCTTGTTTAACCTGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722786       <-- Ccc...............................................  Raphanus sativus cv Early Scarlet Globe
EW716098       <-- Ccc...............................................  Raphanus sativus var. oleiformis
FD579768       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY921851       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX894777       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW716360       <-- CAAACTC-TAATGTC----C-CAAATCCGCTTTCCTTGTTTAACCTGTGT  Raphanus sativus var. oleiformis
EX761853       <-- CAA-CTCTTAATGTC----T-CAAATCCGCTTTCCTTGTTTAACCTGTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716891       <-- CAA-CTCTTAATGTC----T-CAAATCCGCTTTCCTTcc...........  Raphanus sativus var. oleiformis
FD965421       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD572331       <-- CAAACTC-TAATGTC----C-CAAATCCGCTTTCCTTGTTTAACCTGTGT  Raphanus sativus cv Early Scarlet Globe
EW724000       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD534696       <-- CAAACTC-TAATGTC----C-CAAATCCGCTTTCCTTGTTTAACCTGTGT  Raphanus raphanistrum subsp. maritimus
EX763091       <-- CAA-CTCTTAATGTC----T-CAAATCCGCTTTCCTTGTTTAACCTGTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY900564       <-- CAA-CTCTTAATGTCTCAACTCAAATCCGCTTTCCTTGTTTAACCTGTGT  Raphanus raphanistrum subsp. maritimus
FD954878       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD938687       <-- CAAACTC-TAATGTC----C-CAAATCCGCTTTCCTTGTTTAACCTGTGT  Raphanus sativus var. oleiformis
EX906093       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW720394       --> Ccc...............................................  Raphanus sativus var. oleiformis
EW721338       --> CAA-CTCTTAATGTC----T-CAAATCC......................  Raphanus sativus var. oleiformis
EX766242       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD530555       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX769310       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899048       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX909715       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD583693       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD951037       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW718548       --> CAAACTC-TAATGTC----C-CAAATCCGCTTTCCTTGTATAACCTGTGT  Raphanus sativus var. oleiformis
EW718810       --> CAAACTC-TAATGTC----C-CAAATCCGCTTTCCTTGTATAACCTGTGT  Raphanus sativus var. oleiformis
EX767231       --> CAA-CTC-TTATGTC----T-CAAATCCGCTTTCCTTGTTTAAC-TGTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
AB447963       --> ..................................................  Raphanus sativus cv Sakurajima Daikon var. niger
EW728049       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD935003       --> ..................................................  Raphanus sativus var. oleiformis

               849    -    899
UN19802        --> GCCTCCACCGCTTACACGCAACCACCAGTCTTTGGTTTCTTATTTGCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW722786       <-- ..................................................
EW716098       <-- ..................................................
FD579768       <-- ..................................................
EY921851       <-- ..................................................
EX894777       <-- ..................................................
EW716360       <-- GCCTCCACCcc.......................................
EX761853       <-- GC................................................
EW716891       <-- ..................................................
FD965421       <-- ..................................................
FD572331       <-- GCCTCCc...........................................
EW724000       <-- ..................................................
FD534696       <-- GCCTCCACCcc.......................................
EX763091       <-- GCCTCCACTGCTTc....................................
EY900564       <-- GCCTCCACCGCTTcc...................................
FD954878       <-- ..................................................
FD938687       <-- GCCTCCACCcc.......................................
EX906093       <-- ..................................................
EW720394       --> ..................................................
EW721338       --> ..................................................
EX766242       --> ..................................................
FD530555       --> ..................................................
EX769310       --> ..................................................
EX899048       --> ..................................................
EX909715       --> ..................................................
FD583693       --> ..................................................
FD951037       --> ..................................................
EW718548       --> GCCTCCACCGCTTACACGCAACCACCAGTCTTTGGTTTCTTATTTGCCTT
EW718810       --> GCCTCCACCGCTTACACGCAACCACCAGTCTTTGGTTTCTTATTTGCCTT
EX767231       --> GC................................................
AB447963       --> ..................................................
EW728049       --> ..................................................
FD935003       --> ..................................................

               899    -    949
UN19802        --> CGTTCAC
                   ~~~~~~~
EW722786       <-- .......
EW716098       <-- .......
FD579768       <-- .......
EY921851       <-- .......
EX894777       <-- .......
EW716360       <-- .......
EX761853       <-- .......
EW716891       <-- .......
FD965421       <-- .......
FD572331       <-- .......
EW724000       <-- .......
FD534696       <-- .......
EX763091       <-- .......
EY900564       <-- .......
FD954878       <-- .......
FD938687       <-- .......
EX906093       <-- .......
EW720394       --> .......
EW721338       --> .......
EX766242       --> .......
FD530555       --> .......
EX769310       --> .......
EX899048       --> .......
EX909715       --> .......
FD583693       --> .......
FD951037       --> .......
EW718548       --> CGTTCAC
EW718810       --> CGTTCAC
EX767231       --> .......
AB447963       --> .......
EW728049       --> .......
FD935003       --> .......