1      -     51
UN19852        --> GTATGATTGCTGAAGCAATGAGCAGAGTTGGCAGGAAGGGTGTGGTGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- ..................................................
EW727128       <-- ..................................................
EW722481       --> GTATGATTGCTGAAGCAATGAGCAGAGTTGGCAGGAAGGGTGTGGTGACA
EW722570       --> GTATGATTGCTGAAGCAATGAGCAGAGTTGGCAGGAAGGGTGTGGTGACA
FD941961       --> ..................................................
FD540677       --> ..................................................
EX754512       --> ..................................................

               51     -    101
UN19852        --> CTTGAGGCGGGTAAAAGTGCCGAGAACGCTCTCTACGTTGTGGAAGGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- ..................................................
EW727128       <-- ..................................................
EW722481       --> CTTGAGGCGGGTAAAAGTGCCGAGAACGCTCTCTACGTTGTGGAAGGAAT
EW722570       --> CTTGAGGCGGGTAAAAGTGCCGAGAACGCTCTCTACGTTGTGGAAGGAAT
FD941961       --> ..................................................
FD540677       --> ..................................................
EX754512       --> ..................................................

               101    -    151
UN19852        --> GCAATTTGATCGCGGTTACGTCTCCCCTTACTTTGTGACAGACAGTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- ..................................................
EW727128       <-- ..................................................
EW722481       --> GCAATTTGATCGCGGTTACGTCTCCCCTTACTTTGTGACAGACAGTGAGA
EW722570       --> GCAATTTGATCGCGGTTACGTCTCCCCTTACTTTGTGACAGACAGTGAGA
FD941961       --> ..................................................
FD540677       --> ..................................................
EX754512       --> ..................................................

               151    -    201
UN19852        --> AAATGTCGGTTGAGTTCGACAATTGCAAGTTGCTTCTTGTTGACAAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- ..................................................
EW727128       <-- ..................................................
EW722481       --> AAATGTCGGTTGAGTTCGACAATTGCAAGTTGCTTCTTGTTGACAAGAAG
EW722570       --> AAATGTCGGTTGAGTTCGACAATTGCAAGTTGCTTCTTGTTGACAAGAAG
FD941961       --> ..................................................
FD540677       --> ..................................................
EX754512       --> ..................................................

               201    -    251
UN19852        --> ATTACCAATGCAAGGGATCTTGTTGGTGTTTTGGAGGATGCAATTAGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- ..................................................
EW727128       <-- ..................................................
EW722481       --> ATTACCAATGCAAGGGATCTTGTTGGTGTTTTGGAGGATGCAATTAGAGG
EW722570       --> ATTACCAATGCAAGGGATCTTGTTGGTGTTTTGGAGGATGCAATTAGAGG
FD941961       --> ..................................................
FD540677       --> ..................................................
EX754512       --> ..................................................

               251    -    301
UN19852        --> AGGATACCCGATTTTAATAATTGCAGAAGACATTGAGCAGGAGGCTTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- ..................................................
EW727128       <-- ..................................................
EW722481       --> AGGATACCCGATTTTAATAATTGCAGAAGACATTGAGCAGGAGGCTTTAG
EW722570       --> AGGATACCCGATTTTAATAATTGCAGAAGACATTGAGCAGGAGGCTTTAG
FD941961       --> ..............................................gTAG
FD540677       --> ..................................................
EX754512       --> ..................................................

               301    -    351
UN19852        --> CGACCCTTGTTGTTAACAAGCTTAGAGGCACACTGAAGATTGCAGCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- ..................................................
EW727128       <-- ..................................................
EW722481       --> CGACCCTTGTTGTTAACAAGCTTAGAGGCACACTGAAGATTGCAGCTCTC
EW722570       --> CGACCCTTGTTGTTAACAAGCTTAGAGGCACACTGAAGATTGCAGCTCTC
FD941961       --> CGACCCTTGTTGTTAACAAGCTTAGAGGCACACTGAAGATTGCAGCTCTC
FD540677       --> .................gAGCTTAGAGGCACACTGAAGATTGCAGCTCTC
EX754512       --> ..................................................

               351    -    401
UN19852        --> AAGGCTCCAGGATTTGGAGAGCGCAAGAGCCAATACCTTGACGATATTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- ..................................................
EW727128       <-- ..................................................
EW722481       --> AAGGCTCCAGGATTTGGAGAGCGCAAGAGCCAATACCTTGACGATATTGC
EW722570       --> AAGGCTCCAGGATTTGGAGAGCGCAAGAGCCAATACCTTGACGATATTGC
FD941961       --> AAGGCTCCAGGATTTGGAGAGCGCAAGAGCCAATACCTTGACGATATTGC
FD540677       --> AAGGCTCCAGGATTTGGAGAGCGCAAGAGCCAATACCTTGACGATATTGC
EX754512       --> ............................................gATTGC

               401    -    451
UN19852        --> CATCCTCACTGGAGCAACTGTGATTCGTGAGGAATTTGGTCTTTCACTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- .............GCAACTGTGATTCGTGAGGAATTTGGTCTTTCACTTG  Raphanus sativus cv Early Scarlet Globe
EW727128       <-- ......................................GTCTTTCACTTG  Raphanus sativus cv Early Scarlet Globe
EW722481       --> CATCCTCACTGGAGCAACTGTGATTCGTGAGGAATTTGGTCTTTCACTTG  Raphanus sativus cv Early Scarlet Globe
EW722570       --> CATCCTCACTGGAGCAACTGTGATTCGTGAGGAATTTGGTCTTTCACTTG  Raphanus sativus cv Early Scarlet Globe
FD941961       --> CATCCTCACTGGAGCAACTGTGATTCGTGAGGAAGTTGGTCTTTCACTTG  Raphanus sativus var. oleiformis
FD540677       --> CATCCTCACTGGAGCAACTGTGATTCGTGAGGAAGTTGGTCTTTCACTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX754512       --> CATCCTCACTGGAGCAACTGTGATTCGTGAGGAAGTTGGTCTTTCACTTG  Raphanus raphanistrum subsp. raphanistrum (MS)

               451    -    501
UN19852        --> ACAAAGCTGGAAAAGAGGTTCTTGGACATGCCGCAAAGGTGGTCCTCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- ACAAAGCTGGAAAAGAGGTTCTTGGACATGCCGCAAAGGTGGTCCTCACC
EW727128       <-- ACAAAGCTGGAAAAGAGGTTCTTGGACATGCCGCAAAGGTGGTCCTCACC
EW722481       --> ACAAAGCTGGAAAAGAGGTTCTTGGACATGCCGCAAAGGTGGTCCTCACC
EW722570       --> ACAAAGCTGGAAAAGAGGTTCTTGGACATGCCGCAAAGGTGGTCCTCACC
FD941961       --> ACAAAGCTGGAAAAGAGGTTCTTGGACATGCCGCAAAGGTGGTCCTCACT
FD540677       --> ACAAAGCTGGAAAAGAGGTTCTTGGACATGCCGCAAAGGTGGTCCTCACT
EX754512       --> ACAAAGCTGGAAAAGAGGTTCTTGGACATGCCGCAAAGGTGGTCCTCACC

               501    -    551
UN19852        --> AAGGAGACTTCGACCATTGTGGGTGATGGGAGCACACAGGACGCAGTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- AAGGAGACTTCGACCATTGTGGGTGATGGGAGCACACAGGACGCAGTGCA
EW727128       <-- AAGGAGACTTCGACCATTGTGGGTGATGGGAGCACACAGGACGCAGTGCA
EW722481       --> AAGGAGACTTCGACCATTGTGGGTGATGGGAGCACACAGGACGCAGTGCA
EW722570       --> AAGGAGACTTCGACCATTGTGGGTGATGGGAGCACACAGGACGCAGTGCA
FD941961       --> AAGGAGACTTCGACCATTGTGGGTGATGGGAGCACACGGGACGCAGTGCA
FD540677       --> AAGGAGACTTCGACCATTGTGGGTGATGGGAGCACACAGGACGCAGTGCA
EX754512       --> AAGGAGACTTCGACCATTGTGGGTGATGGGAGCACACAGGACGCAGTGCA

               551    -    601
UN19852        --> AAAGCGTGTTACACAGATTAAGAACCTTATTGAGCAAGCAGAGCAAGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- AAAGCGTGTTACACAGATTAAGAACCTTATTGAGCAAGCAGAGCAAGATT
EW727128       <-- AAAGCGTGTTACACAGATTAAGAACCTTATTGAGCAAGCAGAGCAAGATT
EW722481       --> AAAGCGTGTTACACAGATTAAGAACCTTATTGAGCAAGCAGAGCAAGATT
EW722570       --> AAAGCGTGTTACACAGATTAAGAACCTTATTGAGCAAGCAGAGCAAGATT
FD941961       --> AAAGCGTGTTACACAAATTAAGAACCTTATTGAGCAAGCAGAGCAAGATT
FD540677       --> AAAGCGTGTTACACAAATTAAGAACCTTATTGAGCAAGCAGAGCAAGATT
EX754512       --> AAAGCGTGTTACACAGATTAAGAACCTTATTGAGCAAGCAGAGCAAGATT

               601    -    651
UN19852        --> ATGAGAAGGAGAAACTGAATGAGAGAATTGCAAAGCTCTCTGGTGG-AGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- ATGAGAAGGAGAAACTGAATGAGAGAATTGCAAAGCTCTCTGGTGG-AGT
EW727128       <-- ATGAGAAGGAGAAACTGAATGAGAGAATTGCAAAGCTCTCTGGTGG-AGT
EW722481       --> ATGAGAAGGAGAAACTGAATGAGAGAATTGCAAAGCTCTCTGGTGGGAGT
EW722570       --> ATGAGAAGGAGAAACTGAATGAGAGAATTGCAAAGCTCTCTGGTGG-AGT
FD941961       --> ATGAGAAAGAGAAACTGAATGAGAGAATTGCAAAGCTCTCTGGTGG-AGT
FD540677       --> ATGAGAAGGAGAAACTGAATGAGAGAATTGCAAAGCTCTCTGGTGG-AGT
EX754512       --> ATGAGAAGGAAAAACTGAATGAGAGAATTGCAAAGCTCTCTGGTGG-AGT

               651    -    701
UN19852        --> TGCTGTGATTCAGGTCGGAGCACAAACGGAGACAGAACTCAAAGAGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- TGCTGTGATTCAGGTCGGAGCACAAACGGAGACAGAACTCAAAGAGAAGA
EW727128       <-- TGCTGTGATTCAGGTCGGAGCACAAACGGAGACAGAACTCAAAGAGAAGA
EW722481       --> TGCTGTGAT.........................................
EW722570       --> TGCTGTGATTCACGTCGGAGCACAAACGGAGACAGAACTCAAAGAGAAGA
FD941961       --> TGCTGTGATTCAGGTCGGAGCACAAACGGAGACAGAACTCAAAGAGAAGA
FD540677       --> TGCTGTAATTCAGGTCGGAGCACAAACGGAGACAGAACTCAAAGAGAAGA
EX754512       --> TGCTGTGATTCAGGCCGGAGCACAAACGGAGACGGAACTCAAAGAGAAGA

               701    -    751
UN19852        --> AACTGAGAGTTGAAGATGCTCTTAATGCTACAAAGGCTGCTGTTGAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- AACTGAGAGTTGAAGATGCTCTTAATGCTACAAAGGCTGCTGTTGAGGAA
EW727128       <-- AACTGAGAGTTGAAGATGCTCTTAATGCTACAAAGGCTGCTGTTGAGGAA
EW722481       --> ..................................................
EW722570       --> AACTGAGAGTTGAAGATGCTCTTAATGCTAC...................
FD941961       --> AACTGAGAGTTGAAGATGCTCTTAATGCTACAAAGGCTGCTGTTGAGGAA
FD540677       --> AACTGAGAGTTGAAGATGCTCTCAATGCTACAAAGGCCGCTGTTGAGGAA
EX754512       --> AACTGAGAGTTGAAGATGCTCTTAATGCTACAAAGGCTGCTGTTGAGGAA

               751    -    801
UN19852        --> GGTATTGTCGTTGGTGGTGGCTGTACTCTGCTTCGTCTTGCTTCCAAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- GGTATTGTCGTTGGTGGTGGCTGTACTCTGCTTCGTCTTGCTTCCAAGGT
EW727128       <-- GGTATTGTCGTTGGTGGTGGCTGTACTCTGCTTCGTCTTGCTTCCAAGGT
EW722481       --> ..................................................
EW722570       --> ..................................................
FD941961       --> GGTATTGTCGTTGGTGGTGGCTGCACTCTGCTTCGTCTTGCTTCCAAGGT
FD540677       --> GGTATTGTCGTTGGTGGTGGCTGTACTCTGCTTCGTCTTGCTTCCAAGGT
EX754512       --> GGTATTGTCGTTGGTGGTGGCTGCACTCTGCTTCGTCTTGCTTCCAAGGT

               801    -    851
UN19852        --> TGATGCCATTAAAGCCGGTCTTGACAATGATGAAGAAAAGGTTGGAGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- TGATGCCATTAAAGCCGGTCTTGACAATGATGAAGAAAAGGTTGGAGCGG
EW727128       <-- TGATGCCATTAAAGCCGGTCTTGACAATGATGAAGAAAAGGTTGGAGCGG
EW722481       --> ..................................................
EW722570       --> ..................................................
FD941961       --> GGATGCTATTAAAGCCGGTCTTGACAATGATGAAGAAAAGGTTGGAGCGG
FD540677       --> TGATGCCATTAAAGCCGGTCTTGACAATGATGAAGAAAAGGTTGGAGCGG
EX754512       --> GGATGCCATTAAAGCCGGTCTTGACAATGATGAAGAAAAGGTTGGAGCAG

               851    -    901
UN19852        --> ATATCGTGAAAAGAGCACTGAGTTACCCTCTGAAACTGATTGCCAAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- ATATCGTGAAAAGAGCACTGAGTTACCCTCTGAAGCTGATTGCCAAGAAC
EW727128       <-- ATATCGTGAAAAGAGCACTGAGTTACCCTCTGAAGCTGATTGCCAAGAAC
EW722481       --> ..................................................
EW722570       --> ..................................................
FD941961       --> ATATCGTGAAAAGAGCACTGAGTTACCCTCTGAAACTGATTGCCAAGAAC
FD540677       --> ATATCGTGAAAAGAGCACTGAGTTATCCTCTGAAACTGATTGCCAAGAAC
EX754512       --> ATATAGTGAAAAGAGCACTGAGTTACCCTCTGAAACTGATTGCCAAGAAC

               901    -    951
UN19852        --> GCCGGAGTCAATGGAAGCGTAGTTAGCGAGAAGGTGCTTTCTAACGATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- GCCGGAGTCAATGGAAGCGTAGTTAGCGAGAAGGTGCTTTCTAACGATAA
EW727128       <-- GCCGGAGTCAATGGAAGCGTAGTTAGCGAGAAGGTGCTTTCTAACGATAA
EW722481       --> ..................................................
EW722570       --> ..................................................
FD941961       --> GCCGGAGTCAATGGAAGCGTAGTTAGCGAGAAAGTGCTTTCTAACGATAA
FD540677       --> GCTGGAGTCAATGGAAGCGTAGTTAGCGAGAAGGTGCTTTCTAACGATAA
EX754512       --> GCTGGAGTCAATGGAAGCGTAGTTAGCGAGAAGGTGCTTTCTAACGATAA

               951    -   1001
UN19852        --> TGTGAAGTACGGTTACAATGCTGCAACCGGCAAGTACGAGGATCTAATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- TGTGAAGTACGGTTACAATGCTGCAACCGGAAAGTACGAGGATCTAATGG
EW727128       <-- TGTGAAGTACGGTTACAATGCTGCAACCGGAAAGTACGAGGATCTAATGG
EW722481       --> ..................................................
EW722570       --> ..................................................
FD941961       --> TGTGAAGTACGGTTACAATGCTGCAACCGGCAAGTACGAG-ATCTAATGG
FD540677       --> TGTGAAGTACGGTTACAATGCTGCAACCGGCAAGTACGAGGATCTAATGG
EX754512       --> TGTGAAGTACGGTTACAATGCTGCAACTGGCAAGTACGAGGATCTAATGG

               1001   -   1051
UN19852        --> CTGCAG-AATCATCGATCCAACTAAGGTTGTGAGATGTTGCTTGGAACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- CTGCAGGAATCATCGATCCAACTAAGGTTGTGAGATGTTGCTTGGAACAC
EW727128       <-- CTGCAGGAATCATCGATCCAACTAAGGTTGTGAGATGTTGCTTGGAACAC
EW722481       --> ..................................................
EW722570       --> ..................................................
FD941961       --> CTGCAG-AATCATCGATCCAACTAAG-TTGTGAGATGTTGCT-GGAACAC
FD540677       --> CTGCAG-AATCATCGATCCAACTAAG-TTGTGAGATGTTGCT-GGAACAC
EX754512       --> CTGCAG-AATCATCGATCCAACTAAAGTTGTGAGATGTTGCTTGGAACAC

               1051   -   1101
UN19852        --> GCAGCTTCG-TTGCAAAGACATTCTTGATGTCTGACTGTGTCGTTGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- GCAGCTTCGGTTGCAAAGACATTCTTGATGTCTGACTGTGTCGTTGTTGA
EW727128       <-- GCAGCTTCGGTTGCAAAGACATTCTTGATGTCTGACTGTGTCGTTGTTGA
EW722481       --> ..................................................
EW722570       --> ..................................................
FD941961       --> GCAGCTTCG-TTGCAAAGACATTCTTGATGTCTGACTGTGTCGTTGTTGA
FD540677       --> GCAGCTTCG-TTGCAA-GACATTCTTGATGTCTGACTGTGTCGTgtgaga
EX754512       --> GCAGCTTCG-TTGCAAAGACATTCTTGATGTCTGACTGTGTCGTTGTTGA

               1101   -   1151
UN19852        --> GATCAAGGAGCCTGAGCCAGTTCCTGTAGGCAACCCAATGGACAACTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- GATCAAGGAGCCTGAGCCAGTTCCTGTAGGCAACCCAATGGACAACTCAG
EW727128       <-- GATCAAGGAGCCTGAGCCAGTTCCTGTAGGCAACCCAATGGACAACTCAG
EW722481       --> ..................................................
EW722570       --> ..................................................
FD941961       --> GAT...............................................
FD540677       --> ..................................................
EX754512       --> GATCAAG-AGC-TGAGCCAGT-CCTGTAG-CA-CCCA-TGGACA-CTCAG

               1151   -   1201
UN19852        --> GTTATGGATACTGAGGTGATAGGGGAATAAAGTAACACTGCCAGAAACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- GTTATGGATACTGAGGTGATAGGGGAATAAAGTAACACTGCCAGAAACTT
EW727128       <-- GTTATGGATACTGAGGTGATAGGGGAATAAAGTAACACTGCCAGAAACTT
EW722481       --> ..................................................
EW722570       --> ..................................................
FD941961       --> ..................................................
FD540677       --> ..................................................
EX754512       --> --TATGGATACTGAG...................................

               1201   -   1251
UN19852        --> TGATTCCTTTTAGCTTTGTAATGGATGAGCAAGTGTAATGATTTTGAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- TGATTCCTTTTAGCTTTGTAATGGATGAGCAAGTGTAATGATTTTGAACA
EW727128       <-- TGATTCCTTTTAGCTTTGTAATGGATGAGCAAGTGTAATGATTTTGAACA
EW722481       --> ..................................................
EW722570       --> ..................................................
FD941961       --> ..................................................
FD540677       --> ..................................................
EX754512       --> ..................................................

               1251   -   1301
UN19852        --> AGAGAATGTGCTTTGTACTGAAAATTTTGAACCGGTCATATGAATAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727428       <-- AGAGAATGTGCTTTGTACTGAAAATTTTGAACCGGTCATATGAATAAATC
EW727128       <-- AGAGAATGTGCTTTGTACTGAAAATTTTGAACCGGTCATATGAATAAATC
EW722481       --> ..................................................
EW722570       --> ..................................................
FD941961       --> ..................................................
FD540677       --> ..................................................
EX754512       --> ..................................................

               1301   -   1351
UN19852        --> ATGATTCCTTAGTAAAAT
                   ~~~~~~~~~~~~~~~~~~
EW727428       <-- ATGATTCCTTAGTAAAAT
EW727128       <-- ATGATTCCTTAGTAAAAT
EW722481       --> ..................
EW722570       --> ..................
FD941961       --> ..................
FD540677       --> ..................
EX754512       --> ..................