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Alignment for radish unigene UN19853

               1      -     51
UN19853        --> GGACCAATGAACACTTCCACACTGCTCTAGGGAACAGCAACCCATCTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- ..................................................
EX893031       <-- ..................................................
EY935546       <-- ..................................................
EY893706       <-- ..................................................
FD960931       <-- ..................................................
EV545250       <-- ..................................................
FD965104       --> GGACCAATGAACACTTCCACACTGCTCTAGGGAACAGCAACCCATCTGCA
EX763176       --> ..............................................gGCA
EV549480       --> ..................................................
EY897364       --> ..................................................
FD949606       --> ..................................................
EX889264       --> ..................................................
EV549864       --> ..................................................

               51     -    101
UN19853        --> CTTCGTGAAACTGTTGTTGAGGTTCCCAATGTTTCTTGGGATGACATTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- ..................................................
EX893031       <-- ..................................................
EY935546       <-- ..................................................
EY893706       <-- ..................................................
FD960931       <-- ..................................................
EV545250       <-- ..................................................
FD965104       --> CTTCGTGAAACCGTTGTTGAGGTTCCCAATGTTTCTTGGGATGACATTGG
EX763176       --> CTTCGTGAAACTGTTGTTGAGGTTCCCAATGTTTCTTGGGATGACATTGG
EV549480       --> ..................................................
EY897364       --> ..................................................
FD949606       --> ..................................................
EX889264       --> ..................................................
EV549864       --> ..................................................

               101    -    151
UN19853        --> AGTTCTTGAGAATGTCAAGAGAGAGCTCCAGGAGACTGTTCAATACCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- ..................................................
EX893031       <-- ..................................................
EY935546       <-- ..................................................
EY893706       <-- ..................................................
FD960931       <-- ..................................................
EV545250       <-- ..................................................
FD965104       --> AGGTCTTGAGAATGTCAAGAGAGAGCTCCAGGAGACTGTTCAATACCCTG
EX763176       --> AGTTCTTGAGAATGTCAAGAGAGAGCTCCAGGAGACTGTTCAATACCCAG
EV549480       --> ..................................................
EY897364       --> ..................................................
FD949606       --> ..................................................
EX889264       --> ..................................................
EV549864       --> ..................................................

               151    -    201
UN19853        --> TCGAGCACCCAGAGAAGTTTGAGAAATTCGGTATGTCTCCGTCTAAGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- ..................................................
EX893031       <-- ..................................................
EY935546       <-- ..................................................
EY893706       <-- ..................................................
FD960931       <-- ..................................................
EV545250       <-- ..................................................
FD965104       --> TCGAGCACCCAGAGAAGTTTGAGAAATTCGGTATGTCTCCGTCTAAGGGA
EX763176       --> TCGAGCACCCAGAGAAGTTTGAGAAATTCGGCATGTCTCCGTCTAAGGGA
EV549480       --> ..................................................
EY897364       --> ..................................................
FD949606       --> ..................................................
EX889264       --> ..................................................
EV549864       --> ..................................................

               201    -    251
UN19853        --> GTTCTTTTCTACGGTCCTCCTGGATGTGGTAAAACTCTTTTGGCCAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- ..................................................
EX893031       <-- ..................................................
EY935546       <-- ..................................................
EY893706       <-- ..................................................
FD960931       <-- ..................................................
EV545250       <-- ..................................................
FD965104       --> GTCCTTTTCTACGGTCCTCCTGGATGTGGTAAAACTCTTTTGGCCAAAGC
EX763176       --> GTTCTTTTCTACGGTCCTCCTGGATGTGGTAAAACTCTTTTGGCCAAAGC
EV549480       --> ...................................gCTTTTGGCCAAAGC
EY897364       --> ..................................................
FD949606       --> ..................................................
EX889264       --> ..................................................
EV549864       --> ..................................................

               251    -    301
UN19853        --> TATAGCCAACGAATGCCAAGCAAACTTCATCAGTGTCAAAGGTCCTGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- ..................................................
EX893031       <-- ..................................................
EY935546       <-- ..................................................
EY893706       <-- ..................................................
FD960931       <-- ..................................................
EV545250       <-- ..................................................
FD965104       --> TATAGCCAACGAGTGCCAAGCAAACTTCATCAGTGTCAAAGGTCCTGAGC
EX763176       --> TATAGCCAACGAATGCCAAGCAAACTTCATCAGTGTCAAAGGTCCTGAGC
EV549480       --> TATAGCCAACGAATGCCAAGCAAACTTCATCAGTGTCAAAGGTCCTGAGC
EY897364       --> .............................gCAGTGTCAAAGGTCCTGAGC
FD949606       --> ..................................................
EX889264       --> ..................................................
EV549864       --> ..................................................

               301    -    351
UN19853        --> TTCTCACTATGTGGTTTGGTGAGAGTGAAGCGAATGTCCGTGAAATCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- ..................................................
EX893031       <-- ..................................................
EY935546       <-- ..................................................
EY893706       <-- ..................................................
FD960931       <-- ..................................................
EV545250       <-- ..................................................
FD965104       --> TTCTCACTATGTGGTTTGGTGAGAGTGAAGCGAATGTCCGTGAAATCTTT
EX763176       --> TTCTCACTATGTGGTTTGGTGAGAGTGAAGCGAATGTCCGTGAAATCTTT
EV549480       --> TTCTCACTATGTGGTTTGGTGAGAGTGAAGCGAATGTCCGTGAAATCTTT
EY897364       --> TTCTCACTATGTGGTTTGGTGAGAGTGAAGCGAATGTCCGTGAAATCTTT
FD949606       --> ..................................................
EX889264       --> ..................................................
EV549864       --> ..................................................

               351    -    401
UN19853        --> GACAAGGCCCGTCAGTCTGCTCCATGTGTTCTCTTCTTTGACGAGCTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- ..................................................
EX893031       <-- ..................................................
EY935546       <-- ..................................................
EY893706       <-- ..................................................
FD960931       <-- ..................................................
EV545250       <-- ..................................................
FD965104       --> GACAAGGCTCGTCAGTCTGCTCCATGTGTTCTCTTCTTTGACGAGCTCGA
EX763176       --> GACAAGGCCCGTCAGTCTGCTCCATGTGTTCTCTTCTTTGACGAGCTCGA
EV549480       --> GACAAGGCCCGTCAGTCTGCTCCATGTGTTCTCTTCTTTGACGAGCTCGA
EY897364       --> GACAAGGCTCGTCAGTCTGCTCCATGTGTTCTCTTCTTTGACGAGCTCGA
FD949606       --> .gCAAGGCCCGTCAGTCTGCTCCATGTGTTCTCTTCTTTGACGAGCTCGA
EX889264       --> ..................................................
EV549864       --> ..................................................

               401    -    451
UN19853        --> CTCCATTGCGACTCAGAGAGGAGGTGGAAGCGGAGGTGATGGTGGCGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- ..................................................
EX893031       <-- ..................................................
EY935546       <-- ..................................................
EY893706       <-- ..................................................
FD960931       <-- ..................................................
EV545250       <-- ..................................................
FD965104       --> CTCCATTGCGACTCAGAGAGGAGGTGGAAGCGGAGGTGATGGTGGCGGTG
EX763176       --> CTCCATTGCGACTCAGAGAGGAGGTGGAAGCGGAGGTGATGGTGGCGGTG
EV549480       --> CTCCATTGCGACTCAGAGAGGAGGTGGAAGCGGAGGTGATGGTGGCGGTG
EY897364       --> CTCCATTGCGACTCAGAGAGGAGGTGGAAGCGGAGGTGATGGTGGCGGTG
FD949606       --> CTCCATTGCGACTCAGAGAGGAGGTGGAAGCGGAGGTGATGGTGGCGGTG
EX889264       --> ..................................................
EV549864       --> ..................................................

               451    -    501
UN19853        --> CAGCTGATAGAGTCCTGAACCAGCTTTTGACTGAGATGGATGGAATGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- ..............ccGAACCAGCTTTTGACTGAGATGGATGGAATGAAC
EX893031       <-- ..................................................
EY935546       <-- ..................................................
EY893706       <-- ..................................................
FD960931       <-- ..................................................
EV545250       <-- ..................................................
FD965104       --> CAGCTGATAGAGTCCTGAACCAGCTTTTGACTGAGATGGATGGAATGAAC
EX763176       --> CAGCTGATAGAGTCCTGAACCAGCTTTTGACTGAGATGGATGGAATGAAC
EV549480       --> CAGCTGATAGAGTCCTGAACCAGCTTTTGACTGAGATGGATGGAATGAAC
EY897364       --> CAGCTGATAGAGTCCTGAACCAGCTTTTGACTGAGATGGATGGAATGAAC
FD949606       --> CAGCTGATAGAGTCCTGAACCAGCTTTTGACTGAGATGGATGGAATGAAC
EX889264       --> ...............................gGAGATGGATGGGATGAAC
EV549864       --> ..................................................

               501    -    551
UN19853        --> GCCAAGAAAACCGTCTTCATCATCGGAGCAACCAACAGACCCGACATCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- GCCAAGAAAACCGTCTTCATCATCGGAGCAACCA----ACACGACATCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893031       <-- ...............TTCATCATCGGAGCAACCAACAGACCCGACATCAT  Raphanus sativus var. oleiformis
EY935546       <-- ...............TTCATCATCGGAGCAACCAACAGACCCGACATTAT  Raphanus sativus cv Early Scarlet Globe
EY893706       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD960931       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV545250       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD965104       --> GCCAAGAAAACCGTCTTCATCATCGGAGCAACCAACAGACCCGACATCAT  Raphanus raphanistrum subsp. maritimus
EX763176       --> GCCAAGAAAACCGTCTTCATCATCGGAGCAACCAACAGACCCGACATTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549480       --> GCCAAGAAAACCGTCTTCATCATCGGAGCAACCAACAGACCCGACATTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897364       --> GCCAAGAAAACCGTCTTCATCATCGGAGCAACCAACAGACCCGACATCAT  Raphanus raphanistrum subsp. maritimus
FD949606       --> GCCAAGAAAACCGTCTTCATCATCGGAGCAACCAACAGACCCGACATTAT  Raphanus sativus cv Early Scarlet Globe
EX889264       --> GCCAAGAAAACCGTCTTCATCATCGGAGCAACCAACAGACCCGACATCAT  Raphanus sativus var. oleiformis
EV549864       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN19853        --> TGACTCTGCTCTTCTCCGACCAGGAAGGCTCGACCAGCTCATTTACATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- TGACTCTGCTCTTCTCCGACCAGGAAGGCTCGACCAGCTCATTTACATTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893031       <-- TGACTCTGCTCTTCTCCGACCAGGAAGGCTCGACCAGCTCATTTACATTC  Raphanus sativus var. oleiformis
EY935546       <-- TGACTCTGCTCTTCTCCGACCAGGGAGGCTCGACCAGCTCATTTACATTC  Raphanus sativus cv Early Scarlet Globe
EY893706       <-- .............................TCGACCAGCTCATTTACATTC  Raphanus raphanistrum subsp. maritimus
FD960931       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV545250       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD965104       --> TGACTCTGCTCTTCTCCGACCAGGAAGGCTCGACCAGCTCATTTACATTC  Raphanus raphanistrum subsp. maritimus
EX763176       --> TGACTCTGCTCTTCTCCGACCAGGGAGGCTCGACCAGCTCATTTACATTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549480       --> TGACTCTGCTCTTCTCCGACCAGGGAGGCTCGACCAGCTCATTTACTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897364       --> TGACTCTGCTCTTCTCCGACCAGGAAGGCTCGACCAGCTCATTTACATTC  Raphanus raphanistrum subsp. maritimus
FD949606       --> TGACTCTGCTCTTCTCCGACCAGGGAGGCTCGACCAGCTCATTTACATTC  Raphanus sativus cv Early Scarlet Globe
EX889264       --> TGACTCTGCTCTTCTCCGACCAGGAAGGCTCGACCAGCTCATTTACATTC  Raphanus sativus var. oleiformis
EV549864       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN19853        --> CGCTGCCGGACGAGGATTCACGTCTCAATATCTTCAAGGCCGCCTTGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- CGCTGCCGGACGAGGATTCACGTCTCAATATCTTCAAGGCCGCCTTGAGG
EX893031       <-- CGCTGCCGGACGAGGATTCACGTCTCAATATCTTCAAGGCCGCCTTGAGG
EY935546       <-- CGCTGCCGGACGAGGATTCACGTCTCAATATCTTCAAGGCCGCCTTGAGG
EY893706       <-- CGCTGCCGGACGAGGATTCACGTCTCAATATCTTCAAGGCCGCCTTGAGG
FD960931       <-- ..................................................
EV545250       <-- ..................................................
FD965104       --> CGCTGCCGGACGGGGATTCACGTCTCAATATCTTCAAGGCCGCCTTGAGG
EX763176       --> CGCTGCCGGACGAGGATTCACGTCTCAATATCTTCAAGACCGCCTTGAGG
EV549480       --> CGCTGCCGGACGAGGATTCACGTCTCAATATCTTCAAGGCCGCCTTGAGG
EY897364       --> CGCTGCCGGACGAGGATTCACGTCTCAATATCTTCAAGGCCGCCTTGAGG
FD949606       --> CGCTGCCGGACGAGGATTCACGTCTCAATATCTTCAAGGCCGCCTTGAGG
EX889264       --> CGCTGCCGGACGAGGATTCACGTCTCAATATCTTCAAGGCCGCCTTGAGG
EV549864       --> ..................................................

               651    -    701
UN19853        --> AAGTCTCCTATTGCTAAAGATGTAGACATCAACGCTCTCGCTAAGTACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- AAGTCTCCTATTGCTAAAGATGTAGACATCAACGCTCTCGCTAAGTACAC
EX893031       <-- AAGT---CTATTGCTAAAGATGTAGACATCAACGCTCTCGCTAAGTACAC
EY935546       <-- AAGTCTCCTATTGCTAAAGATGTAGACATCAACGCTCTCGCTAAGTACAC
EY893706       <-- AAGTCTCCTATTGCTAAAGATGTAGACATCAACGCTCTCGCTAAGTACAC
FD960931       <-- ..................................................
EV545250       <-- ..................................................
FD965104       --> AAGTCTCCTATTGCTAAAGATGTAGACATCAACGCTCTCGCTAAGTACAC
EX763176       --> AAGTCTCCTATTGCTAAAGATGTAGACATCAACGCTCTCGCTAAGTACAC
EV549480       --> AAGTCTCCTATTGCTAAAGATGTAGACATCAACGCTCTCGCTAAGTACAC
EY897364       --> AAGTCTCCTATTGCTAAAGATGTAGACATCAACGCTCTCGCTAAGTACAC
FD949606       --> AAGTCTTCTATTGCTAAAGATGTAAACATCAACGCTCTCGCTAAGTACAC
EX889264       --> AAGTCT---ATTGCTAAAGATGTAGACATCAACGCTCTCGCTAAGTACAC
EV549864       --> ..................................................

               701    -    751
UN19853        --> ACAGGGATTCAGTGGTGCTGATATAACTGAGATTTGCCAGAGGGCTTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- ACAGGGATTCAGTGGTGCTGATATAACTGAGATTTGCCAGAGGGCTTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893031       <-- ACAGGGATTCAGTGGTGCTGATATAACTGAGATTTGCCAGAGGGCTTGCA  Raphanus sativus var. oleiformis
EY935546       <-- ACAGGGATTCAGTGGTGCTGATATCACTGAGATTTGCCAGAGGGCTTGCA  Raphanus sativus cv Early Scarlet Globe
EY893706       <-- ACAGGGATTCAGTGGTGCTGATATAACTGAGATTTGCCAGAGGGCTTGCA  Raphanus raphanistrum subsp. maritimus
FD960931       <-- ............................GAGATTTGCCAGAGGGCTTGCA  Raphanus raphanistrum subsp. maritimus
EV545250       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD965104       --> ACAGGGATTCAGTGGTGCTGATATAACTGAGATTTGCCAGAGGGCTTGCA  Raphanus raphanistrum subsp. maritimus
EX763176       --> ACAGGGATTCAGTGGTGCTGATATCACTGAGATTTGCCAGAGGGC.....  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549480       --> ACAGGGATTCAGTGGTGCTGATATCACTGAGATTTGCCAGAGGGCTTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897364       --> ACAGGGATTCAGTGGTGCTGATATAACTGAGATTTGCCAGAGGGCTTGCA  Raphanus raphanistrum subsp. maritimus
FD949606       --> ACAGGGATTCAGTGGTGCTGATATCACTGAGATTTGCCAGAGGGCTTGCA  Raphanus sativus cv Early Scarlet Globe
EX889264       --> ACAGGGATTCAGTGGTGCTGATATAACTGAGATTTGCCAGAGGGCTTGCA  Raphanus sativus var. oleiformis
EV549864       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               751    -    801
UN19853        --> AATACGCCATCAGAGAAAACATCGAGAAGGACATTGAGAAGGAGAAGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- AATACGCCATCAGAGAAAACATCGAGAAGGACATTGAGAAGGAGAAGAGG
EX893031       <-- AATACGCCATCAGAGAAAACATCGAGAAGGACATTGAGAAGGAGAAGAGG
EY935546       <-- AATACTCCATCAGAGAAAATATCGAGAAGGACATTGAGAAGGAGAAGAGG
EY893706       <-- AATACGCCATCAGAGAAAACATCGAGAAGGACATTGAGAAGGAGAAGAGG
FD960931       <-- AATACGCCATCAGAGAAAACATCGAGAAGGACATTGAGAAGGAGAAGAGG
EV545250       <-- ..................................................
FD965104       --> AATACGCCATCAGAGAAAACATCGAGAAAGACATTG..............
EX763176       --> ..................................................
EV549480       --> AATACGCCATCAGAGAAAATATCGAGAAGGACATTGAGAAGGAGAAGAGG
EY897364       --> AATACGCCATCAGAGAAAACATCGAGAAGGACATTGAGAAGGAGAAGAGG
FD949606       --> AATACGCCATCAGAGAAAATATCGAGAAGGACATTGAGAAGGAGAAGAGG
EX889264       --> AATACGCCATCAGAGAAAACATCGAGAAGGACATTGAGAAGGAGAAGAGG
EV549864       --> ..................................................

               801    -    851
UN19853        --> AGGAGCGAGAACCCTGAAGCCATGGAGGAAGATGGAGTTGATGAAGTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- AGGAGCGAGAACCCTGAAGCCATGGAGGAAGATGGAGTTGATGAAGTGTC
EX893031       <-- AGGAGCGAGAACCCTGAAGCCATGGAGGAAGATGGAGTTGATGAAGTGTC
EY935546       <-- AGGAGCGAGAACCCAGAAGCCATGGAGGAAGATGGAGTTGATGAAGTATC
EY893706       <-- AGGAGCGAGAACCCTGAAGCCATGGAGGAAGATGGAGTTGATGAAGTGTC
FD960931       <-- AGGAGCGAGAACCCTGAAGCCATGGAGGAAGATGGAGTTGATGAAGTGTC
EV545250       <-- ..................................................
FD965104       --> ..................................................
EX763176       --> ..................................................
EV549480       --> AGGAGCGAGAACCCAGAAGCCATGGAGGAAGATGGAGTGGATGAAGTATC
EY897364       --> AGGAGCGAGAACCCTGAAGCCATGGAGGAAGATGGAGTTGATGAAGTGTC
FD949606       --> AGGAGCGAGAACCCAGAAGCCATGGAGGAAGATGGAGTGGATGAAGTATC
EX889264       --> AGGAGCGAGAACCCTGAAGCCATGGAGGAAGATGGAGTTGATGAAGTGTC
EV549864       --> ..................................................

               851    -    901
UN19853        --> AGAGATAAAAGCTGCACACTTTGAGGAGTCGATGAAGTACGCACGCAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- AGAG--AAAAGCTGCACACTTTGAGGAGTCGATGAAGTACGCACGCAGGA
EX893031       <-- AGAGATAAAAGCTGCACACTTTGAGGAGTCGATGAAGTACGCACGCAGGA
EY935546       <-- AGAGATAAAAGCTGCACACTTTGAGGAGTCGATGAAGTACGCACGCAGGA
EY893706       <-- AGAGATAAAAGCTGCACACTTTGAGGAGTCGATGAAGTACGCACGCAGGA
FD960931       <-- AGAGATAAAAGCTGCACACTTTGAGGAGTCGATGAAGTACACACGCAGGA
EV545250       <-- ..................................................
FD965104       --> ..................................................
EX763176       --> ..................................................
EV549480       --> AGAGATAAAAGCTGCACACTTTGAGGAGTCGATGAAGTACGCACGCAGGA
EY897364       --> AGAGATAAAAGCTGCACACTTTGAGGAGTCGATGAAGTACGCACGCACGA
FD949606       --> AGAGATAAAAGTTGCACACTTTGAGGAGTCGATGAAGTACGCACGCAGGA
EX889264       --> AGAGATAAAAGCTGCACACTTTGAGGAGTCGATGAAGTACGCACGCAGGA
EV549864       --> ..................................................

               901    -    951
UN19853        --> GTGTGAGCGATGCAGACATCAGGAAGTACCAAGCTTTTGCTCAGACGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- GTGTGAGCGATGCAGACATCAGGAAGTACCAAGCTTTTGCTCAGACGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893031       <-- GTGTGAGCGATGCAGACATCAGGAAGTACCAAGCTTTTGCTCAGACGCTT  Raphanus sativus var. oleiformis
EY935546       <-- GTGTGAGCGATGCAGACATCAGGAAATACCAAGCCTTTGCTCAGACGCTG  Raphanus sativus cv Early Scarlet Globe
EY893706       <-- GTGTGAGCGATGCAGACATCAGGAAGTACCAAGCTTTTGCTCAGACGCTT  Raphanus raphanistrum subsp. maritimus
FD960931       <-- GTGTGAGCGATGCAGACATCAGGAAGTACCAAGCTTTTGCTCAGACGCTT  Raphanus raphanistrum subsp. maritimus
EV545250       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD965104       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX763176       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549480       --> GTGTGAGTGATGCAGACATCACGAAATACCAAGCCTTTGCTCAGACGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897364       --> GTGTGAGCGATGCAGACA................................  Raphanus raphanistrum subsp. maritimus
FD949606       --> GTGTGAGTGATGCAGACATCAGGAAATACCAAGCCTTTGCTCAGACGCTG  Raphanus sativus cv Early Scarlet Globe
EX889264       --> GTGTGAGCGATGCAGACATCAGGAAGTACCAAGCTTTTGCTCAGACGCTT  Raphanus sativus var. oleiformis
EV549864       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               951    -   1001
UN19853        --> CAGCAGTCTAGAGGGTTTGGTTCCGAGTTCAGGTTCGAGACTAATGCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- CAGCAGTCTAGAGGGTTTGGTTCCGAGTTCAGGTTCGAGACTAATGCTGG
EX893031       <-- CAGCAGTCTAGAGGGTTTGGTTCCGAGTTCAGGTTCGAGACTAATGCTGG
EY935546       <-- CAGCAGTCTAGAGGGTTTGGTTCCGAGTTCAGGTTCGTGACTAATGCTGG
EY893706       <-- CAGCAGTCTAGAGGGTTTGGTTCCGAGTTCAGGTTCGAGACTAATGCTGG
FD960931       <-- CAGCAGTCTAGAGGGTTTGGTTCCGAGTTCAGGTTCGAGACTAATGCTGG
EV545250       <-- ..................................................
FD965104       --> ..................................................
EX763176       --> ..................................................
EV549480       --> CAGCAGTCTAGAGGGTTTGGTTCCGAGT......................
EY897364       --> ..................................................
FD949606       --> CAGCAGTCTAGAGGGTTTGGTTCCGAGT......................
EX889264       --> CAGCAGTCTAGAGGGTTTGGTTCCGAGTTCAGGTTCGAGACTAATGCTGG
EV549864       --> ..................................................

               1001   -   1051
UN19853        --> TTCAGGTGTAACCACTGGAGTCGCTGATCCTTTTGCCACGTCTGCAGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- TTCAGGTGTAACCACTGGAGTCGCTGATCCTTTTGCCACGTCTGCAGCTG
EX893031       <-- TTCAGGTGTAACCACTGGAGTCGCTGATCCTTTTGCCACGTCTGCAGCTG
EY935546       <-- TTCAGGTGCAACCACTGGAGTCGCTGATCCTTTTGCCACGTCTGCAGCTG
EY893706       <-- TTCAGGTGTAACCACTGGAGTCGCTGATCCTTTTGCCACGTCTGCAGCTG
FD960931       <-- TTCAGGTGTAACCACTGGAGTCGCTGATCCTTTTGCTACGTCTGCAGCTG
EV545250       <-- ..................................................
FD965104       --> ..................................................
EX763176       --> ..................................................
EV549480       --> ..................................................
EY897364       --> ..................................................
FD949606       --> ..................................................
EX889264       --> TTCAGGTGTAACCACTGGAGTCGCTGATCCTTTTGCCACGTCTGCAGCTG
EV549864       --> ..................................................

               1051   -   1101
UN19853        --> CTACTGCGGACGATGATGATCTCTACAATTAGTGATCCAGTTTATCATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- CTACTGCGGACGATGATGATCTCTACAATTAGTGATCCAGTTTATCATAC
EX893031       <-- CTACTGCGGACGATGATGATCTCTACGATTAGTGATCCAGTTTATCATAC
EY935546       <-- CTACTGCGGACGATGATGATCTCTACAATTAGTGATCCAGTTTATCATAC
EY893706       <-- CTACTGCGGACGATGATGATCTCTACAATTAGTGATCCAGTTTATCATAC
FD960931       <-- CTACTGCGGACGATGATGATCTCTACAATTAGTGATCCAGTTTATCATAC
EV545250       <-- .......GGACGATGATGATCTCTACAATTAGTGATCAAGTTTATCATAC
FD965104       --> ..................................................
EX763176       --> ..................................................
EV549480       --> ..................................................
EY897364       --> ..................................................
FD949606       --> ..................................................
EX889264       --> CTACTGCGGACGATGATGATCTCTACGATTAGTGATCCAGTTTATCATAC
EV549864       --> .......GGACGATGATGATCTCTACAATTAGTGATCAAGTTTATCATAC

               1101   -   1151
UN19853        --> TTTGTTATTTAAGTTTTCAGTTGGATTCTCTCTTGCTTCTGGATACCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- TTTGTTATTTAAGTTTTCAGTTGGATTCTCTCTTGCTTCTGGATACCTTG
EX893031       <-- TTTGTTATTTAAGTTTTCAGTTGGATTCTCTCTTGCTTCTGGATACCTTG
EY935546       <-- TTTGTTATTTAAGTTTTCAGTTGGATTCTCTCTTGCTTCTGGATACCTTG
EY893706       <-- TTTGTTATTTAAGTTTTCAGTTGGATTCTCTCTTGCTTCTGGATACCTTG
FD960931       <-- TTTGTTATTTAAGTTTTCAGTTGGATTCTCTCTTGCTTCTGGATACCTTG
EV545250       <-- TCTGTTATTTAAGTTTTCAGTCGGATTCTCTCTTGCTTCTGGATACCTTG
FD965104       --> ..................................................
EX763176       --> ..................................................
EV549480       --> ..................................................
EY897364       --> ..................................................
FD949606       --> ..................................................
EX889264       --> TTTGTTATTTAAGTTTTCAGTTGGATTCTCTCTTGCTTCTGGATACC...
EV549864       --> TCTGTTATTTAAGTTTTCAGTCGGATTCTCTCTTGCTTCTGGATACCTTG

               1151   -   1201
UN19853        --> TGTTTCTTTAAGTTATCAGAATTATGTTGGTGCTTTTAATCAATGTTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- TGTTTCTTTAAGTTATCAGAATTATGTTGGTGCTTTc.............
EX893031       <-- TTTTTCTTTAAGTTATCAGAATTATGTTGGTGCTTTTAATCAATGTTCTC
EY935546       <-- TGTTTCTTTAAGTTATCAGAATTATGTTGGTGCTTTTAATCAATGTTCTC
EY893706       <-- TGTTTCTTTAAGTTATCAGAATTATGTTGGTGCTTTTAATCAATGTTCTC
FD960931       <-- TGTTTCTTTAAGTTATCAGAATTATGTTGGTGCTTTT.............
EV545250       <-- TGTTTCTTTAAGTTATCAGAATTATGTTGGTGCTTTTAATCAATGTTCTC
FD965104       --> ..................................................
EX763176       --> ..................................................
EV549480       --> ..................................................
EY897364       --> ..................................................
FD949606       --> ..................................................
EX889264       --> ..................................................
EV549864       --> TGTTTCTTTAAGTTATCAGAATTATGTTGGTGCTTTTAATCAATGTTCTC

               1201   -   1251
UN19853        --> AATTG-ACGACTCTTGTTCATTCGTAATGACTATGATTTACAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD975911       <-- ..............................................
EX893031       <-- AATTGGACGACTCTTGTTCATTCGTAATGACTATGATTTACAAATC
EY935546       <-- AATTG-ACGACTag................................
EY893706       <-- AATTGGACGACTCTTGTcc...........................
FD960931       <-- ..............................................
EV545250       <-- AGTTG-ACtcc...................................
FD965104       --> ..............................................
EX763176       --> ..............................................
EV549480       --> ..............................................
EY897364       --> ..............................................
FD949606       --> ..............................................
EX889264       --> ..............................................
EV549864       --> AGTTG-ACtcc...................................