RadishBase

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Alignment for radish unigene UN19878

               1      -     51
UN19878        --> AAAGTCACTTCCCCAAGTTTCTTTTCTAGTTAAGTTTTTCAGTAAATTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY948738       <-- ..................................................
EV528149       <-- ..................................................
EW731820       <-- ..................................................
FD965486       <-- ..................................................
EY898195       <-- ..................................................
FD578988       <-- ..................................................
FD980004       <-- ..................................................
EY912992       <-- ..................................................
FD989347       <-- ..................................................
EV532214       --> AAAGTCACTTCCCCAAGTTTCTTTTCTAGTTAAGTTTTTCAGTAAATTAC
FD961211       --> ..................................................
FD544444       --> ..................................................
FD985138       --> ..................................................
FD583052       --> ..................................................

               51     -    101
UN19878        --> ATTGATCATCGAGATGCAAGATAAATTGAGAAGAAACTAAAATGCAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY948738       <-- ..................................................
EV528149       <-- ..................................................
EW731820       <-- ..................................................
FD965486       <-- ..................................................
EY898195       <-- ..................................................
FD578988       <-- ..................................................
FD980004       <-- ..................................................
EY912992       <-- ..................................................
FD989347       <-- ..................................................
EV532214       --> ATTGATCATCGAGATGCAAGATAAATTGAGAAGAAACTAAAATGCAAAAA
FD961211       --> ...............GCAAGATAAATTGAGAAGAAACTAAAATGCAAAAA
FD544444       --> ...............................AGAAACTAAAATGCAAAAA
FD985138       --> ..................................................
FD583052       --> ..................................................

               101    -    151
UN19878        --> CAGCATTGGTAAAATCTGTGTGCAGCCTCTCTCTCTCTCTCTCTCTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY948738       <-- ..................................................
EV528149       <-- ..................................................
EW731820       <-- ..................................................
FD965486       <-- ..................................................
EY898195       <-- ..................................................
FD578988       <-- ..................................................
FD980004       <-- ..................................................
EY912992       <-- ..................................................
FD989347       <-- ..................................................
EV532214       --> CAGCATTGGTAAAATCTGTGTGCAGCCTCTCTCTCTCTCTCTCTCTCTCT
FD961211       --> CAGCATTGGTAAAATCTGTGTGCAGCCTCTCTCTCTCTCTCTCTCTCTCT
FD544444       --> CAGCATTGGTAAAATCTGTGTGCAGCCTCTCTCTCTCTCTCTCTCTCTCT
FD985138       --> .......aGTAAAATCTGTGTGCAGCCTCTCTCTCTCTCTCTCTCTCT--
FD583052       --> ..................................................

               151    -    201
UN19878        --> --GCAAATGCAGGTTAAAGATTACAATCTTCTTTTGTCATTCTTTTCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY948738       <-- .................agtaagatacatctcTTTGTCAT-C-TTTCAAC
EV528149       <-- ..................................................
EW731820       <-- ..................................................
FD965486       <-- ..................................................
EY898195       <-- ..................................................
FD578988       <-- ..................................................
FD980004       <-- ..................................................
EY912992       <-- ..................................................
FD989347       <-- ..................................................
EV532214       --> CTGCAAATGCAGGTTAAAGATTACAATCTTCTTTTGTCATTCTTTTCAAC
FD961211       --> --GCAAATGCAGGTTAAAGATTACAATCTTCTTTTGTCATTCTTTTCAAC
FD544444       --> --GCAAATGCAGGTTAAAGATTACAATCTTCTTTTGTCATTCTTTTCAAC
FD985138       --> --GCAAATGCAGGTTAAAGATTACAATCTTCTTTTGTCATTCTTTTCAAC
FD583052       --> ..................GATTACAATCTTCTTTTGTCATTCTTTTCAAC

               201    -    251
UN19878        --> GGTTCAAAACAGATGCTCTTGAGCAGAAGTACATTACAAATTCTCCTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY948738       <-- GGT-CAAAACAGATGCTCT-GAGCAGAAGTACAT-ACAAAT-CT-CTAAG
EV528149       <-- ..................................................
EW731820       <-- ..................................................
FD965486       <-- ..................................................
EY898195       <-- ..................................................
FD578988       <-- ..................................................
FD980004       <-- ..................................................
EY912992       <-- ..................................................
FD989347       <-- ..................................................
EV532214       --> GGTTCAAAACAGATGCTCTTGAGCAGAAGTACATTACAAATTCTCCTAAG
FD961211       --> GGTTCAAAACAGATGCTCTTGAGCAGAAGTACATTACAAATTCTCCTAAG
FD544444       --> GGTTCAAAACAGATGCTCTTGAGCAGAAGTACATTACAAATTCTCCTAAG
FD985138       --> GGTTCAAGACAGATGCTCTTGAGCAGAAGTACATTACAAATTCTCCTAAG
FD583052       --> GGTTCAAAACAGATGCTCTTGAGCAGAAGTACATTACAAATTCTCCTAAG

               251    -    301
UN19878        --> GAAGTGACAGAAACCTTACAGAACCGTGAAGCTTGTCAGACGATAAATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY948738       <-- GA-GTGACAGAAAC-TTACGGAACCGTGAAGCT-GTCAGACGATAA-TTT
EV528149       <-- ...............TTACAGAACCGTGAAGCT-GTCAGACGATAAATTT
EW731820       <-- ..................................................
FD965486       <-- ..................................................
EY898195       <-- ..................................................
FD578988       <-- ..................................................
FD980004       <-- ..................................................
EY912992       <-- ..................................................
FD989347       <-- ..................................................
EV532214       --> GAAGTGACAGAAACCTTACAGAACCGTGAAGCTTGTCAGACGATAAATTT
FD961211       --> GAAGTGACAGAAACCTTACAGAACCGTGAAGCTTGTCAGACGATAAATTT
FD544444       --> GAAGTGACAGAAACCTTACAGAACCGTGAAGCTTGTCAGACGATAAATTT
FD985138       --> GAAGTGACAGAAACCTTACAGAACCGTGAAGCTTGTCAGACGATAA-TTT
FD583052       --> GAAGTGACAGAAACCTTACAGAACCGTGAAGCTTGTCAGACGATAA-TTT

               301    -    351
UN19878        --> GAGCATTCGAGCAGTAGCTACACTTTCTATTCCTCCATAGGACCAGAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY948738       <-- GAGCAT-CGAGCAGTAGCTACACTTTCTATTCCTCCATAGGACCAGAACC
EV528149       <-- GAGCATTCGAGCAGTAGCTACACTTTCTATTCCTCCATAGGACCAGA-CC
EW731820       <-- ....................................ATAGGACCAGA-CC
FD965486       <-- ................................tctatcctcatagacaga
EY898195       <-- ..................................................
FD578988       <-- ..................................................
FD980004       <-- ..................................................
EY912992       <-- ..................................................
FD989347       <-- ..................................................
EV532214       --> GAGCATTCGAGCAGTAGCTACACTTTCTATTCCTCCATAGGACCAGAACC
FD961211       --> GAGCATTCGAGCAGTAGCTACACTTTCTATTCCTCCATAGGACCAGAACC
FD544444       --> GAGCATTCGAGCAGTAGCTACACTTTCTATTCCTCCATAGGACCAGAACC
FD985138       --> GAGCATTCGAGCAGTAGCTACACTTTCTATTCCTCCATAGGACCAGAACC
FD583052       --> GAGCATTCGAGCAGTAGCTACACTTTCTATTCCTCCATAGGACCAGAACC

               351    -    401
UN19878        --> GTCATTAACACCAGATGCAGGATCAGGAACTATCAGGCCTGCGGGAACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY948738       <-- GTCATTAACACCAGATGCAGGATCAGGAACTATCAGGCCTGCAGGAACCT
EV528149       <-- GTCATTAACACCAGATGCAGGATCAGGAACTATCAGGC-TGCGGGAACCT
EW731820       <-- GTCCATAACACCAGATGCAGGATCAGGAACTATCAGGC-TGCAGGAAC-T
FD965486       <-- ccgtcataacaCAGATGCAG-ATCAGGA-CTATCA--GCTGCG--GACCT
EY898195       <-- ..................................caGCCTGCGGGAACCT
FD578988       <-- ..................................................
FD980004       <-- ..................................................
EY912992       <-- ..................................................
FD989347       <-- ..................................................
EV532214       --> GTCATTAACACCAGATGCAGGATCAGGAACTATCAGGCCTGCGGGAACCT
FD961211       --> GTCATTAACACCAGATGCAGGATCAGGAACTATCAGGCCTGCGGGAACCT
FD544444       --> GTCATTAACACCAGATGCAGGATCAGGAACTATCAGGCCTGCGGGAACCT
FD985138       --> GTCATTAACACCAGATGCAGGATCAGGAACTATCAGGCCTGCAGGAACCT
FD583052       --> GTCATTAACACCAGATGCAGGATCAGGAACTATCAGGCCTGCAGGAACCT

               401    -    451
UN19878        --> GGCCAAACTTCAAAGCCTGTTCGAGTCTGGCAATTTCTTCTATCGTCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY948738       <-- GACCAAACTTCAAAGCCTGTTCGAGTCTGGCAATTTCTTCTATCGTCTGG
EV528149       <-- GGCCAAACTTCAAAGCCTGTTCGAGTCTGGCAATTTCTTCTATCGTCTGG
EW731820       <-- GACCAAACTTCAAAGCCTGTTCGAGTCTGGCAATTTCTTCTATCGTCTGG
FD965486       <-- G-CCAA-CT-CAAAGC-TGT-CGAGTCTG-CAATT-CT-CTATCGTCTGG
EY898195       <-- G-CCAAACTTCAAAGCCTGT-CGAGTCTGGCAATTTCTTCTATCGTCTGG
FD578988       <-- ..CCAAACTTCAAAGCCTGTTCGAGTCTGGCAATTTCTTCTATCGTCTGG
FD980004       <-- .............AGCCTGTTCGAGTCTGGCAATTTCTTCTATCGTCTGG
EY912992       <-- ...................gTCGAGTCTG-CAATTTCT-CTATCGTCTGG
FD989347       <-- ..................................................
EV532214       --> GGCCAAACTTCAAAGCCTGTTCGAGTCTGGCAATTTCTTCTATCGTCTGG
FD961211       --> GGCCAAACTTCAAAGCCTGTTCGAGTCTGGCAATTTCTTCTATCGTCTGG
FD544444       --> GGCCAAACTTCAAAGCCTGTTCGAGTCTGGCAATTTCTTCTATCGTCTGG
FD985138       --> GGCCAAACTTCAAAGCCTGTTCGAGTCTGGCAATTTCTTCTATCGTCTGG
FD583052       --> GACCAAACTTCAAAGCCTGTTCGAGTCTGGCAATTTCTTCTATCGTCTGG

               451    -    501
UN19878        --> GAATTGATAATTGCAGC-CTTGATTGCTAAAATTTGCTCCTGTGTTGGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY948738       <-- GAATTGATAATTGCAGC-CTTGATTGCTAAAATTTGCTCCTGTGTTGGGG
EV528149       <-- GAATTGATAATTGCAGC-CTTGATTGCTAAAATTTGCTCCTGTGTTGGGG
EW731820       <-- GAATTGATAATTGCAGC-CTTGATTGCTAAAATTTGCTCCTGTGTTGGGG
FD965486       <-- GAATTGATAATTGCAGC-GT-GATTGCTAAAATTTGCTC-TGTGTTGGGG
EY898195       <-- -AATTGATAATTGCAGCACTTGATTGCTAAAATTTGCTC-TGTGTTGGGG
FD578988       <-- GAACTGATAATTGCAGC--TTGATTGCTAAAATTTACTCCTGTGTTGGGG
FD980004       <-- GAATTGATAATTGCAGC-CTTGATTGCTAAAATTTGCTCCTGTGTTGGGG
EY912992       <-- GAATTGATAATTGCAGC--TTGATTGCTAAAATTTGCTCCTGTGTTGGGG
FD989347       <-- ..................................................
EV532214       --> GAATTGATAATTGCAGC-CTTGATTGCTAAAATTTGCTCCTGTGTTGGGG
FD961211       --> GAATTGATAATTGCAGC-CTTGATTGCTAAAATTTGCTCCTGTGTTGGGG
FD544444       --> GAATTGATAATTGCAGC-CTTGATTGCTAAAATTTGCTCCTGTGTTGGGG
FD985138       --> GAATTGATAATTGCAGC-CTTGATTGCTAAAATTTGCTCCTGTGTTGGGG
FD583052       --> GAACTGATAATTGCAGC-CTTGATTGCTAAAATTTACTCCTGTGTTGGGG

               501    -    551
UN19878        --> CCACAACTTTAGGAGCCTCTGCATCTTCTGTAGTATCCGACACTTTTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY948738       <-- CCACAACTTTAGGAGCCTCTGCATCTTCTGTAGTATCCGACACTTTTTGA
EV528149       <-- CCACAACTTTAGGAGCCTCTGCATCTTCTGTAGTATCCGACACTTTTTGA
EW731820       <-- CCACAACTTTAGGAGCCTCTGCATCTTCTGTAGTATCCGACACTTTTTGA
FD965486       <-- CCACAACTTTAGGAGCCTCTGCATCTTCTGTAGTATCCGACACTTTTTGA
EY898195       <-- CCACAACTTTAGGAGC-TCTGCATCTTCTGTAGTATCCGACACTTTTTGA
FD578988       <-- CCACAACTTTAGGAGCCTCTGCATCTTCTGTAGTATCCGACACTTTTTGA
FD980004       <-- CCACAACTTTAGGAGCCTCTGCATCTTCTGTAGTATCCGACACTTTTTGA
EY912992       <-- CCACAACTTTAGGAGCCTCTGCATCTTCTGTAGTATCCGACACTTTTTGA
FD989347       <-- ..................................................
EV532214       --> CCACAACTTTAGGAGCCTCTGCATCTTCTGTAGTATCCGACACTTTTTGA
FD961211       --> CCACAACTTTAGGAGCCTCTGCATCTTCTGTAGTATCCGACACTTTTTGA
FD544444       --> CCACAACTTTAGGAGCCTCTGCATCTTCTGTAGTATCCGACACTTTTTGA
FD985138       --> CCACAACTTTAGGAGCCTCTGCATCTTCTGTAGTATCCGACACTTTTTGA
FD583052       --> CCACAACTTTAGGAGCCTCTGCATCTTCTGTAGTATCCGACACTTTTTGA

               551    -    601
UN19878        --> ACCTCCTGCTGAGATACCTTCTTAACCTCTTCTTCTGCTTCCTTAGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY948738       <-- ACCTCCTGCCGAGATACCTTCTTAACCTCTTCTTCTGCTTCCTTAGATGA
EV528149       <-- ACCTCCTGCTGAGATACCTTCTTAACCTCTTCTTCTGCTTCCTTAGATGA
EW731820       <-- ACCTCCTGCTGAGATACCTTCTTAACCTCTTCTTCTGCTTCCTTAGATGA
FD965486       <-- ACCTCCTGCTGAGATACCTTCTTAACCTCTTCTTCTGCTTCCTTAGATGA
EY898195       <-- ACCTCCTGCTGAGATACCTTCTTAACCTCTTCTTCTGCTTCCTTAGATGA
FD578988       <-- ACCTCCTGCTGAGATACCTTCTTAACCTCTTCTTCTGCTTCCTTAGATGA
FD980004       <-- ACCTCCTGCTGAGATACCTTCTTAACCTCTTCTTCTGCTTCCTTAGATGA
EY912992       <-- ACCTCCTGCTGAGATACCTTCTTAACCTCTTCTTCTGCTTCCTTAGATGA
FD989347       <-- .........TGAGATACCTTCTTAACCTCTTCTTCTGCTTCCTTAGATGA
EV532214       --> ACCTCCTGCTGAGATACCTTCTTAACCTCTTCTTCTGCTTCCTTAGATGA
FD961211       --> ACCTCCTGCTGAGATACCTTCTTAACCTCTTCTTCTGCTTCCTTAGATGA
FD544444       --> ACCTCCTGCTGAGATACCTTCTTAACCTCTTCTTCTGCTTCCTTAGATGA
FD985138       --> ACCTCCTGCTGAGATACCTTCTTAACCTCTTCTTCTGCTTCCTTAGATGA
FD583052       --> ACCTCCTGCTGAGATACCTTCTTAACCTCTTCTTCTGCTTCCTTAGATGA

               601    -    651
UN19878        --> AAACAAAGCCGCAGCTTCAGCTCTCTCCTTGTCTTTGACTTTAATGAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY948738       <-- AAACAAAGCCGCAGCTTCAGCTCTCTCCTTGTCTTTGACTTTAATGAAAT
EV528149       <-- AAACAAAGCCGCAGCTTCAGCTCTCTCCTTGTCTTTGACTTTAATGAAAT
EW731820       <-- AAACAAAGCCGCAGCTTCAGCTCTCTCCTTGTCTTTGACTTTAATGAAAT
FD965486       <-- AAACAAAGCCGCAGCTTCAGCTCTCTCCTTGTCTTTGACTTTAATGAAAT
EY898195       <-- AAACAAAGCCGCAGCTTCAGCTCTCTCCTTGTCTTTGACTTTAATGAAAT
FD578988       <-- AAACAAAGCCGCAGCTTCAGCTCTCTCCTTGTCTTTGACTTTAATGAAAT
FD980004       <-- AAACAAAGCCGCAGCTTCAGCTCTCTCCTTGTCTTTGACTTTAATGAAAT
EY912992       <-- AAACAAAGCCGCAGCTTCAGCTCTCTCCTTGTCTTTGACTTTAATGAAAT
FD989347       <-- AAACAAAGCCGCAGCTTCAGCTCTCTCCTTGTCTTTGACTTTAATGAAAT
EV532214       --> AAACAAAGCCGCAGCTTCAGCTCTCTCCTTGTCTTTGACTTTAATGAAAT
FD961211       --> AAACAAAGCCGCAGCTTCAGCTCTCTCCTTGTCTTTGACTTTAATGAAAT
FD544444       --> AAACAAAGCCGCAGCTTCAGCTCTCTCCTTGTCTTTGACTTTAATGAAAT
FD985138       --> AAACAAAGCCGCAGCTTCAGCTCTCTCCTTGTCTTTGACTTTAATGAAAT
FD583052       --> AAACAAAGCCGCAGCTTCAGCTCTCTCCTTGTCTTTGACTTTAATGAAAT

               651    -    701
UN19878        --> CCAGTACCCGAAGCGATTTAAGCTTGTGAATCACATAAAGGCGATAATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY948738       <-- CCAGTACCCGAAGCGATTTAAGCTTGTGAATCACATAAAGGCGATAATTC  Raphanus sativus cv Rat-Tail Radish #3870
EV528149       <-- CCAGTACCCGAAGCGATTTAAGCTTGTGAATCACATAAAGACGATAATTC  Raphanus raphanistrum subsp. maritimus
EW731820       <-- CCAGTACCCGAAGCGATTTAAGCTTGTGAATCACATAAGGGCGATAATTC  Raphanus sativus cv Rat-Tail Radish #3870
FD965486       <-- CCAGTACCCGAAGCGATTTAAGCTTGTGAATCACATAAAGACGATAATTC  Raphanus raphanistrum subsp. maritimus
EY898195       <-- CCAGTACCCGAAGCGATTTAAGCTTGTGAATCACATAAAGACGATAATTC  Raphanus raphanistrum subsp. maritimus
FD578988       <-- CCAGTACCCGAAGCGATTTAAGCTTGTGAATCACATAAAGGCGATAATTC  Raphanus sativus cv Rat-Tail Radish #3870
FD980004       <-- CCAGTACCCGAAGCGATTTAAGCTTGTGAATCACATAAAGGCGATAATTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912992       <-- CCAGTACCCGAAGCGATTTAAGCTTGTGAATCACATAAAGACGATAATTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989347       <-- CCAGTACCCGAAGCGATTTAAGCTTGTGAATCACATAAAGGCGATAATTC  Raphanus raphanistrum subsp. landra
EV532214       --> CCAGTACCCGAAGCGATTTAAGCTTGTGAATCACATAAAGACGATAATTC  Raphanus raphanistrum subsp. maritimus
FD961211       --> CCAGTACCCGAAGCGATTTAAGCTTGTGAATCACATAAAGACGATAATTC  Raphanus raphanistrum subsp. maritimus
FD544444       --> CCAGTACCCGAAGCGATTTAAGCTTGTGAATCACATAAAGa.........  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985138       --> CCAGTACCCGAAGCGATTTAAGCTTGTGAATCACATAAAGGCGATAATTC  Raphanus raphanistrum subsp. landra
FD583052       --> CCAGTACCCGAAGCGATTTAAGCTTGTGAATCACATAAAGGCGATAATTC  Raphanus sativus cv Rat-Tail Radish #3870

               701    -    751
UN19878        --> GGCTTTTTGGTGATATTATTATCCAATAAACTAAGGTACTGAAGCTTCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY948738       <-- GGCTTTTTGGTGATATTATTATCCAATAAACTAAGGTACTGAAGCTTCGG  Raphanus sativus cv Rat-Tail Radish #3870
EV528149       <-- GGCTTCTTGGTGATATTATTATCCAATAAACTAAGGTACTGAAGCTTCGG  Raphanus raphanistrum subsp. maritimus
EW731820       <-- GGCTTTTTGGTGATATTATTATCCAATAAACTAAGGTACTGAAGCTTCGG  Raphanus sativus cv Rat-Tail Radish #3870
FD965486       <-- GGCTTTTTGGTGATATTATTATCCAATAAACTAAGGTACTGAAGCTTCGG  Raphanus raphanistrum subsp. maritimus
EY898195       <-- GGCTTCTTGGTGATATTATTATCCAATAAACTAAGGTACTGAAGCTTCGG  Raphanus raphanistrum subsp. maritimus
FD578988       <-- GGCTTTTTGGTGATATTATTATCCAATAAACTAAGGTACTGAAGCTTCGG  Raphanus sativus cv Rat-Tail Radish #3870
FD980004       <-- GGCTTTTTGGTGATATTATTATCCAATAAACTAAGGTACTGAAGCTTCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912992       <-- GGCTTCTTGGTGATATTATTATCCAATAAACTAAGGTACTGAAGCTTCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989347       <-- GGCCTTTTGGTGATATTATTATCCAATAAACTAAGGTACTGAAGCTTCGG  Raphanus raphanistrum subsp. landra
EV532214       --> GGCTTCTTGGTGATATTATTATCCAATAAACTAAGGTACTGA........  Raphanus raphanistrum subsp. maritimus
FD961211       --> GGCTTTTTGGTGATATTATTATCCAATAAACTAAG...............  Raphanus raphanistrum subsp. maritimus
FD544444       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985138       --> GGCCTTTTGGTGATATTATTATCCAATAAACTAAGGTACTGAAGCTTCGG  Raphanus raphanistrum subsp. landra
FD583052       --> GGCTTTTTGGTGATATTATTATCCAATAAACTAAGGTACTGAAGCTTCGG  Raphanus sativus cv Rat-Tail Radish #3870

               751    -    801
UN19878        --> AATGGAGGCAAGGGGATCGATCTCAACCAAATTCACAAGCCTGTTGTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY948738       <-- AATGGAGGCAAGGGGATCGATCTCAACCAAATTCACAAGCCTGTTGTTCG  Raphanus sativus cv Rat-Tail Radish #3870
EV528149       <-- TATTGAGGCAAGGGGATCGATCTCAACCAAATTCACAAGCCTGTTGTTCG  Raphanus raphanistrum subsp. maritimus
EW731820       <-- AATGGAGGCAAGGGGATCGATCTCAACAAAATTCACAAGCCTGTTGTTCG  Raphanus sativus cv Rat-Tail Radish #3870
FD965486       <-- TATTGAGGCAAGGGGATCGATCTCAACCAAATTCACAAGCCTGTTGTTCG  Raphanus raphanistrum subsp. maritimus
EY898195       <-- TATTGAGGCAAGGGGATCGATCTCAACCAAATTCACAAGCCTGTTGTTCG  Raphanus raphanistrum subsp. maritimus
FD578988       <-- AATGGAGGCAAGGGGATCGATCTCAACCAAATTCACAAACCTGTTGTTCG  Raphanus sativus cv Rat-Tail Radish #3870
FD980004       <-- AATGGAGGCAAGGGGATCGATCTCAACCAAATTCACAAGCCTGTTGTTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912992       <-- TATTGAGGCAAGGGGATCGATCTCAACCAAATTCACAAGCCTGTTGTTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989347       <-- AATGGAGGCAAGGGGATCGATCTCAACCAAATTCACAAGCCTGTTGTTCG  Raphanus raphanistrum subsp. landra
EV532214       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD961211       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD544444       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985138       --> AATGGAGGCAAGGGGATCGATCTCAACCAAATTCACAAGCCTGTTGTTCG  Raphanus raphanistrum subsp. landra
FD583052       --> AATGGAGGCAAGGGGATCGATCTCAACCAAATTCACAAACCTGTTGTTCG  Raphanus sativus cv Rat-Tail Radish #3870

               801    -    851
UN19878        --> TAAGAACCAAAGTGTGCAGCTTCGGTAGGAACTCTCCAATGTTAGGGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY948738       <-- TAAGAACCAAAGTGTGCAGCTTCGGTAGGAACTCTCCAATGTTAGGGTTT
EV528149       <-- TAAGAACCAAAGTGTGCAGCTTCGGTAGGAACTCTCCAATGTTAGGGTTT
EW731820       <-- TAAGAACCAAAGTGTGCAGCTTCGGTAGGAACTCTCCAATGTTAGGGTTT
FD965486       <-- TAAGAACCAAAGTGTGCAGCTTCGGTAGGAACTCTCCAATGTTAGGGTTT
EY898195       <-- TAAGAACCAAAGTGTGCAGCTTCGGTAGGAACTCTCCAATGTTAGGGTTT
FD578988       <-- TAAGAACCAAAGTGTGCAGCTTCGGTAGGAACTCTCCAATGTTAGGGTTT
FD980004       <-- TAAGAACCAAAGTGTGCAGCTTCGGTAGGAACTCTC-AATGTTAGGGTTT
EY912992       <-- TAAGAACCAAAGTGTGCAGCTTCGGTAGGAACTCTCCAATGTTAGGGTTT
FD989347       <-- TAAGAACCAAAGTGTGCAGCTTCGGTAGGAACTCTCCAATGTTAGGGTTT
EV532214       --> ..................................................
FD961211       --> ..................................................
FD544444       --> ..................................................
FD985138       --> TAAGAACCAAAGTGTGCAGCTTCGGTAGGAACTCTCCAATGTTAGGGTTT
FD583052       --> TAAGAACCAAAGTGTGCAGCTTCGGTAGGAACTCTCCAATGTTAGGGTTT

               851    -    901
UN19878        --> ATCCGAGTGATCCGATTGTTATTTACAATCAGAGTCCCTAACCGGTTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY948738       <-- ATCCGAGTGATCCGATTGTTATTTACAATCAGAGTCCCTAACCGGTTGAG
EV528149       <-- ATCCGAGTGATCCGATTGTTATTTACAATCAGAGTCCCTAATCGGTTGAG
EW731820       <-- ATCCGAGTGATCCGATTGTTATTTACAATCAGAGTCCCTAACCGGTTGAG
FD965486       <-- ATCCGAGTGATCCGATTGTTATTTACAATCAGAGTCCCTAACCGGTTGAG
EY898195       <-- ATCCGAGTGATCCGATTGTTATTTACAATCAGAGTCCCTAACCGGTTGAG
FD578988       <-- ATCCGAGTGATCCGATTGTTATTTACAATCAGAGTCCCTAACCGGTTGAG
FD980004       <-- ATCCGAGTGATCCGATTGTTATTTACAATCAGAGTCCCTAACCGGTTGAG
EY912992       <-- ATCCGAGTGATCCGATTGTTATTTACAATCAGAGTCCCTAACCGGTTGAG
FD989347       <-- ATCCGAGTGATCCGATTGTTATTTACAATCAGAGTCCCTAACCGGTTGAG
EV532214       --> ..................................................
FD961211       --> ..................................................
FD544444       --> ..................................................
FD985138       --> ATCCGAGTGATCCGATTGTTATTTACAATCAGAGTCCCTA-CCGGTTGAG
FD583052       --> ATCCGAGTGATCCGATTG................................

               901    -    951
UN19878        --> AAGTGGGAAGTTTTCCAGCTTAACTATCTCATTATCAGACAGATCTATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY948738       <-- AAGTGGGAAGTCTTCCAGCTTAACTATCTCATTATCAGACAGATCTATTG
EV528149       <-- AAGTGGGAAGTTTTCCAGCTTAACTATCTCATTATCAGACAGATCTATTG
EW731820       <-- AAGTGGGAAGTTTTCCAGCTTAACTATCTCATTATCAGACAGATCTATTG
FD965486       <-- AAGTGGGAAGTTTTCCAGCTTAACTATCTCATTATCAGACAGATCTATTG
EY898195       <-- AAGTGGGAAGTTTTCCAGCTTAACTATCTCATTATCAGACAGATCTATTG
FD578988       <-- AAGTGGGAAGTTTTCCAGCTTAACTATCTCATTATCAGACAGATCTATTG
FD980004       <-- AAGTGGGAAGTTTTCCAGCTTAACTATCTCATTATCAGACAGATCTATTG
EY912992       <-- AAGTGGGAAGTTTTCCAGCTTAACTATCTCATTATCAGACAGATCTATTG
FD989347       <-- AAGTGGGAAGTTTTCCAGCTTAACTATCTCATTATCAGACAGATCTATTG
EV532214       --> ..................................................
FD961211       --> ..................................................
FD544444       --> ..................................................
FD985138       --> AAGTGGGAAG........................................
FD583052       --> ..................................................

               951    -   1001
UN19878        --> TATCGAACTGGTCCTCGGTAGCACCCAAGTTCTCGATTACAGGAATCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY948738       <-- TATCGAACTGGTCCTCGGTAc.............................
EV528149       <-- TATCGAACTGGTCCTCGGTAGCACCCAAGTTCTCGATTACAGGAATCTTG
EW731820       <-- TATCGAACTGGTCCTCGGTAGCACCCAAGTTCTCGATTACAGGAATCTTG
FD965486       <-- TATCGAACTGGTCCTCGGTAGCACCCAAGTTCTCGATTACAGGAATCTTG
EY898195       <-- TATCGAACTGGTCCTCGGTAGCACCCAAGTTCTCGATTACAGGAATCTTG
FD578988       <-- TATCGAACTGGTCCTAGGTAGCACCCAAGTTCTCGATTACAGGAATCTTG
FD980004       <-- TATCGAACTGGTCCTCGGTAGCACCCAAGTTCTCGATTACAGGAATCTTG
EY912992       <-- TATCGAACTGGTCCTCGGTAGCACCCAAGTTCTCGATTACAGGAATCTTG
FD989347       <-- TATCGAACTGGTCCTCGGTAGCACCCAAGTTCTCGATTACAGGAATCTTG
EV532214       --> ..................................................
FD961211       --> ..................................................
FD544444       --> ..................................................
FD985138       --> ..................................................
FD583052       --> ..................................................

               1001   -   1051
UN19878        --> TTGCCTCTTAGCTCCAACTCTCGCTCCTTGATGGCATTGAAGAAGTGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY948738       <-- ..................................................
EV528149       <-- TTGCCTCTTAGCTCCAACTCTCGCTCCTTGATGGCATTGAAGAAGTGAGG
EW731820       <-- TTGCCTCTTAGCTCCAACTCTCGCTCCTTGATGGCATTGAAGAAGTGAGG
FD965486       <-- TTGCCTCTTAGCTCCAACTCTCGCTCCTTGATGGCATTGAAGAAGTGAGG
EY898195       <-- TTGCCTCTTAGCTCCAACTCTCGCTCCTTGATGGCATTGAAGAAGTGAGG
FD578988       <-- TTGCCTCTTAGCTCCAACTCTCGCTCCTTGATGGCATTGAAGAAGTGAGG
FD980004       <-- TTGCCTCTTAGCTCCAACTCTCGCTCCTTGATGGCATTGAAGAAGTGAGG
EY912992       <-- TTGCCTCTTAGCTCCAACTCTCGCTCCTTGATGGCATTGAAGAAGTGAGG
FD989347       <-- TTGCCTCTTAGCTCCAACTCTCGCTCCTTGATGGCATTGAAGAAGTGAGG
EV532214       --> ..................................................
FD961211       --> ..................................................
FD544444       --> ..................................................
FD985138       --> ..................................................
FD583052       --> ..................................................

               1051   -   1101
UN19878        --> ACTGTTCCAGATCAAATCAGCTGTGAGCTTCACCATTGTTCTACTTCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY948738       <-- ..................................................
EV528149       <-- ACTGTTCCAGATCAAATCAGCTGTGAGCTTCACCATTGTTCTACTTCTAG
EW731820       <-- GCTGTTCCAGATCAAATCAGCTGTGAGCTTCACCATTGTTCTACTTCTAG
FD965486       <-- ACTGTTCCAGATCAAATCAGCTGTGAGCTTCACCATTGTTCTACTTCTAG
EY898195       <-- ACTGTTCCAGATCAAATCAGCTGTGAGCTTCACCATTGTTCTACTTCTAA
FD578988       <-- ACTGTTCCAGATCAAATCAGCTGTGAGCTTCACCATTGTTCTACTTCTAG
FD980004       <-- ACTGTTCCAGATCAAATCAGCTGTGAGCTTCACCATTGTTCTACTTCTAG
EY912992       <-- ACTGTTCCAGATCAAATCAGCTGTGAGCTTCACCATTGTTCTACTTCTAG
FD989347       <-- ACTGTTCCAGATCAAATCAGCTGTGAGCTTCACCATTGTTCTACTTCTAG
EV532214       --> ..................................................
FD961211       --> ..................................................
FD544444       --> ..................................................
FD985138       --> ..................................................
FD583052       --> ..................................................

               1101   -   1151
UN19878        --> GGTTTTACAGCTTCT---CGCTCTCTGCTCCTCGGATTCAGAAGAAATAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY948738       <-- ..................................................
EV528149       <-- GGTTTTACcc........................................
EW731820       <-- GGTTTTACAGCTTCT---CGCTCTCTGCTCCTCcc...............
FD965486       <-- GGTTTTACAGCTTCT---CGCTCTCTG.......................
EY898195       <-- GGTTTTACAGCTTCT---CGCTCTCTGCTCCTCGGATTCAGAAGAAATAG
FD578988       <-- GGTTTTACAGCTTCc...................................
FD980004       <-- GGTTTTACAGCTTCTTCTCGCTCTCTGCTCCTCGGATTCAGAAGAAATAG
EY912992       <-- GGTTTTACAGCTTCT---CGCTCTCTGCTC....................
FD989347       <-- GGTTTTACAGCTTCT---CGCTCTCTGCTCCTCGGATTCAGAAGAAATAG
EV532214       --> ..................................................
FD961211       --> ..................................................
FD544444       --> ..................................................
FD985138       --> ..................................................
FD583052       --> ..................................................

               1151   -   1201
UN19878        --> AGAACCC...
                   ~~~~~~~~~~
EY948738       <-- ..........
EV528149       <-- ..........
EW731820       <-- ..........
FD965486       <-- ..........
EY898195       <-- AGAACagccc
FD578988       <-- ..........
FD980004       <-- AGAACCC...
EY912992       <-- ..........
FD989347       <-- AGAACagccc
EV532214       --> ..........
FD961211       --> ..........
FD544444       --> ..........
FD985138       --> ..........
FD583052       --> ..........