1 - 51
UN19936 --> GGGGCTGTAATGGCACAAGTTTCTATGAGGAACTTTCAGTGCGTTGGATA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544798 <-- ..................................................
EX891540 <-- ..................................................
EX767444 <-- ..................................................
FD977760 <-- ..................................................
FD548644 --> GGGGCTGTAATGGCACAAGTTTCTATGAGGAACTTTCAGTGCGTTGGATA
EX763353 --> ......ggAATGGCACAAGTTCCTATGAGGAACTTTCAGTGTGTTGGATA
EX887377 --> .....gggAATGGCACAAGTTTCTATGAGGAACTTTCAGTGCGTTGGATA
FD982140 --> ......ggAATGGCACAAGTTTCTATGAGGAACTTTCAGTGCGTTGGATA
FD939032 --> .........ggGGCACAAGTTTCTATGAGGAACTTTCAGTGCGTTGGATA
EV813531 --> ..................................................
51 - 101
UN19936 --> GCCTGACACGAGAAAGCTGATCTTACCCGTTACTTACTTGTATATTACAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544798 <-- .......ACGAGAAAGCTGATCTTACCCGTTACTTACTTGTATATTACAA
EX891540 <-- ..................................................
EX767444 <-- ..................................................
FD977760 <-- ..................................................
FD548644 --> GCCTGACACGAGAAAGCTGATCTTACCCGTTACTTACTTGTATATTACAA
EX763353 --> GCCTGACACGAGAA-GCTGATCTTACCCGTTACTTACTTGTATATTACAA
EX887377 --> GCCTGACACGAGAAAGCTGATCTTACCCGTTACTTACTTGTATATTACAA
FD982140 --> GCCTGACACGAGAAAGCTGATCTTACCCGTTACTTACTTGTATATTACAA
FD939032 --> GCCTGACACGAGAAAGCTGATCTTACCCGTTACTTACTTGTATATTACAA
EV813531 --> ..................................................
101 - 151
UN19936 --> TCGCCGTTTAAGAATATTTGGAAGCCCTTCTCTCTCTCCTTGAACACACA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544798 <-- TCGCCGTTTAAGAATATTTGGAAGCCCTTCTCTCTCTCCTTGAACACACA
EX891540 <-- .............................CTCTCTCTCCTTGAACACACA
EX767444 <-- ..................................................
FD977760 <-- ..................................................
FD548644 --> TCGCCGTTTAAGAATATTTGGAAGCCCTTCTCTCTCTCCTTGAACACACA
EX763353 --> TCGCCGTTTAAGAATATTTGGAAGCCCTTCTCTCTCTCCTTGAACACACA
EX887377 --> TCGCCGTTTAAGAATATTTGGAAGCCCTTCTCTCTCTCCTTGAACACACA
FD982140 --> TCGCCGTTTAAGAATATTTGGAAGCCCTTTTCTCTCTCCTTGAACACACA
FD939032 --> TCGCCGTTTAAGAATATTTGGAAGCCCTTCTCTCTCTCCTTGAACACACA
EV813531 --> ........TAAGAATATTCGGAAGCCCTTCTCTCTCTCCTTGAACACACA
151 - 201
UN19936 --> CACACACACAC--GACACGCGTGAATACAATCTCCCATGGCTGCATTTGC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544798 <-- CACA----CAC--GACACGCGTGAATACAATCTCCCATGGCTGCATTTGC Raphanus raphanistrum subsp. raphanistrum (NY)
EX891540 <-- CACACACACAC--GACACGCGTGAATACAATCTCCCATGGCTGCATTTGC Raphanus sativus var. oleiformis
EX767444 <-- .................................................. Raphanus raphanistrum subsp. raphanistrum (NY)
FD977760 <-- .................................................. Raphanus raphanistrum subsp. raphanistrum (NY)
FD548644 --> CACACAC------GACACGCGTGAATACAATCTCCCATGGCTGCATTTGC Raphanus raphanistrum subsp. raphanistrum (NY)
EX763353 --> CACACAC------GACACGCGTGAATACAATCTCCCATGGCTGCATTTGC Raphanus raphanistrum subsp. raphanistrum (NY)
EX887377 --> CACACACACAC--GACACGCGTGAATACAATCTCCCATGGCTGCATTTGC Raphanus sativus var. oleiformis
FD982140 --> CACACAC------GACACGCGTGAATACAATCTCCCATGGCTGCATTTGC Raphanus raphanistrum subsp. raphanistrum (NY)
FD939032 --> CACACACACACACGACACGCGTGAATACAATCTCCCATGGCTGCATTTGC Raphanus sativus var. oleiformis
EV813531 --> CACACACACAC--GACACGCGTGAATACAATCTCCCATGGCTGCATTTGC Raphanus sativus cv Zaosheng60tian
201 - 251
UN19936 --> AACAGCAGAAGCGTGTGACAGCAACGCAGAACTAATATCAAACGGAGACC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544798 <-- AACAGCAGAAGCGTGTGACAGCAACGCAGAACTAATATCAAACGGAGACC
EX891540 <-- AACAGCAGAAGCGTGTGACAGCAACGCAGAACTAATATCAAACGGAGACC
EX767444 <-- ................................TAATATCAAACGGAGACC
FD977760 <-- ..................................................
FD548644 --> AACAGCAGAAGCGTGTGACAGCAACGCAGAACTAATATCAAACGGAGACC
EX763353 --> AACAGCAGAAGCGTGTGACAGCAACGCAGAACTAATATCAAACGGAGACC
EX887377 --> AACAGCAGAAGCGTGTGACAGCAACGCAGAACTAATATCAAACGGAGACC
FD982140 --> AACAGCAGAAGCGTGTGACAGCAACGCAGAACTAACATCAAACGGAGACC
FD939032 --> AACAGCAGAAGCGTGTGACAGCAACGCAGAACTAATATCAAACGGAGACC
EV813531 --> AACAGCAGAAGCGTGTGACAGCAACGCAGAACTAATATCAAACGGAGACC
251 - 301
UN19936 --> TACGGGCTCTCCAACCAACCTTCAAGATCTATGGACAAAGAAGATGCTTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544798 <-- TACGGGCTCTCCAACCAACCTTCAAGATCTATGGACAAAGAAGGTGCTTC
EX891540 <-- TACGGGCTCTCCAACCAACCTTCAAGATCTATGGACAAAGAAGATGCTTC
EX767444 <-- TACGGGCTCTCCAACCAACCTTCAAGATTTATGGACAAAGAAGATGCTTC
FD977760 <-- ..................................................
FD548644 --> TACGGGCTCTCCAACCAACCTTCAAGATCTATGGACAAAGAAGGTGCTTC
EX763353 --> TACGGGCTCTCCAACCAACCTTCAAGATCTATGGACAAAGAAGATGCTTC
EX887377 --> TACGGGCTCTCCAACCAACCTTCAAGATCTATGGACAAAGAAGATGCTTC
FD982140 --> TACGGGCCCTCCAACCAACCTTCAAGATCTATGGACAAAGAAGATGCTTC
FD939032 --> TACGGGCTCTCCAACCAACCTTCAAGATCTATGGACAAAGAAGGTGCTTC
EV813531 --> TACGGGCTCTCCAACCAACCTTCAAGATCTATGGACAAAGAAGATGCTTC
301 - 351
UN19936 --> TCCGGACCAATCGTGACACTCAAGGTCTTTGAAGACAACGTCCTAGTCAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544798 <-- TCCGGACCAATCGTGACACTCAAGGTCTTTGAAGACAACGTCCTAGTCAG
EX891540 <-- TCCGGACCAATCGTGACACTCAAGGTCTTTGAAGACAACGTCCTAGTCAG
EX767444 <-- TCCGGACCAATCGTGACACTCAAGGTCTTTGAAGACAACGTCCTAGTCAG
FD977760 <-- ..................................................
FD548644 --> TCCGGACCAATCGTGACACTCAAGGTCTTTGAAGACAACGTCCTAGTCAG
EX763353 --> TCCGGACCAATCGTGACACTCAAGGTCTTTGAAGACAACGTCCTAGTCAG
EX887377 --> TCCGGACCAATCGTGACACTCAAGGTCTTTGAAGACAACGTCCTAGTCAG
FD982140 --> TCCGGACCAATCGTGACACTCAAGGTCTTTGAAGACAACGTCCTAGTCAG
FD939032 --> TCCGGACCAATCGTGACACTCAAGGTCTTTGAAGACAACGTCCTAGTCAG
EV813531 --> TCCGGACCAATCGTGACACTCAAGGTCTTTGAAGACAACGTCCTAGTCAG
351 - 401
UN19936 --> AAACCAACTAGAGACAAAAGGAGAAGGCGCGGTCTTAGTTATAGACGGTG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544798 <-- AAACCAACTAGAGACAAAAGGAGAAGGCGCGGTCTTAGTTATAGACGGTG
EX891540 <-- AAACCAACTAGAGACAAAAGGAGAAGGCGCGGTCTTAGTTATAGACGGTG
EX767444 <-- AAACCAACTAGAGACAAAAGGAGAAGGGGCGGTTTTAGTTATAGACGGTG
FD977760 <-- ..................................................
FD548644 --> AAACCAACTAGAGACAAAAGGAGAAGGCGCGGTCTTAGTTATAGACGGTG
EX763353 --> AAACCAACTAGAGACAAAAGGAGAAGGCGCGGTCTTAGTTATAGACGGTG
EX887377 --> AAACCAACTAGAGACAAAAGGAGAAGGCGCGGTCTTAGTTATAGACGGTG
FD982140 --> AAACCAACTAGAGACAAAAGGAGAAGGCGCGGTCTTAGTTATAGACGGTG
FD939032 --> AAACCAACTAGAGACAAAAGGAGAAGGCGCGGTCTTAGTTATAGACGGTG
EV813531 --> AAACCAACTAGAGACAAAAGGAGAAGGCGCGGTCTTAGTTATAGACGGTG
401 - 451
UN19936 --> GTGGAAGCATGAGGTGCGCACTTGTTGGAGGAAACCTCGGACAGTTAGCT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544798 <-- GTGGAAGCATGAGGTGCGCACTTGTTGGAGGAAACCTCGGACAGTTAGCT
EX891540 <-- GTGGAAGCATGAGGTGCGCACTTGTTGGAGGAAACCTCGGACAGTTAGCT
EX767444 <-- GTGGAAGCATGAGGTGCGCACTTGTTGGAGGAAACCTCGGACAGTTAGCT
FD977760 <-- ..................................................
FD548644 --> GTGGAAGCATGAGGTGCGCACTTGTTGGAGGAAACCTCGGACAGTTAGCT
EX763353 --> GTGGAAGCATGAGGTGCGCACTTGTTGGAGGAAACCTCGGACAGTTAGCT
EX887377 --> GTGGAAGCATGAGGTGCGCACTTGTTGGAGGAAACCTCGGACAGTTAGCT
FD982140 --> GTGGAAGCATGAGGTGCGCACTTGTTGGAGGAAACCTCGGACAGTTAGCT
FD939032 --> GTGGAAGCATGAGATGCGCACTTGTTGGAGGAAACCTCGGACAGTTAGCT
EV813531 --> GTGGAAGCATGAGGTGCGCACTTGTTGGAGGAAACCTCGGACAGTTAGCT
451 - 501
UN19936 --> CAGAACAACGGGTGGGTAGGGATTTTGGTGAATGGGTGCGTTAGAGATGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544798 <-- CAGAACAACGGGTGGGTAGGGATTTTGGTGAATGGGTGCGTTAGAGATGT
EX891540 <-- CGGAACAACGGGTGGGTAGGGATTTTGGTGAATGGGTGCGTTAGAGATGT
EX767444 <-- CAGAACAACGGGTGGGTAGGGATTTTGGTGAATGGGTGCGTTAGAGATGT
FD977760 <-- ..................................................
FD548644 --> CAGAACAACGGGTGGGTAGGGATTTTGGTGAATGGGTGCGTTAGAGATGT
EX763353 --> CAGAACAACGGGTGGGTAGGGATTTTGGTGAATGGGTGCGTTAGAGATGT
EX887377 --> CGGAACAACGGGTGGGTAGGGATTTTGGTGAATGGGTGCGTTAGAGATGT
FD982140 --> CAGAACAACGGGTGTGTAGGGATTTTGGTGAATGGGTGCGTTAGAGATGT
FD939032 --> CAGAACAACGGGTGGGTAGGGATTTTGGTGAATGGGTGCGTTAGAGATGT
EV813531 --> CAGAACAACGGGTGGGTAGGGATTTTGGTGAATGGGTGCGTTAGAGATGT
501 - 551
UN19936 --> GGATGAGATCAATGACTGTGATGTTGGGGTTAGGGCATTGGGTTCTAACC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544798 <-- GGATGAGATCAATGACTGTGATGTTGGGGTTAGGGCATTGGGTTCTAACC
EX891540 <-- GGATGAGATCAATGACTGTGATGTTGGGGTTAGGGCATTGGGTTCTAACC
EX767444 <-- GGATGAGATCAATGACTGTGATGTTGGGGTTAGGGCATTGGGTTCTAACC
FD977760 <-- ..................................................
FD548644 --> GGATGAGATCAATGACTGTGATGTTGGGGTTAGGGCATTGGGTTCTAACC
EX763353 --> GGATGAGATCAATGACTGTGATGTTGGGGTTAGGGCATTGGGTTCTAACC
EX887377 --> GGATGAGATCAATGACTGTGATGTTGGGGTTAGGGCATTGGGTTCTAACC
FD982140 --> GGATGAGATCAATGACTGTGATGTTGGGGTTAGGGCATTGGGTTCTAACC
FD939032 --> GGATGAGATCAATGACTGTGATGTTGGGGTTAGGGCATTGGGTTCTAACC
EV813531 --> GGATGAGATCAATGACTGTGATGTTGGGGTTAGGGCATTGGGTTCTAACC
551 - 601
UN19936 --> CGTTGAAGTCTAGTAAGAAAGGTCAGGGTGAGAAGAATGTGCCGGTTTAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544798 <-- CGTTGAAGTCTAGT---AAAGGTCAGGGTGAGAAGAATGTGCCGGTTTAT
EX891540 <-- CGTTGAAGTCTAGTAAGAAAGGTCAGGGTGAGAAGAATGTGCCGGTTTAT
EX767444 <-- CGTTGAAGTCTAGTAAGAAAGGTCAGGGTGAGAAGAATGTGCCGGTTTAT
FD977760 <-- ................GAAAGGTCAGGGTGAGAAGAATGTGCCGGTTTAT
FD548644 --> CGTTGAAGTCTAGTAA---AGGTCAGGGTGAGAAGAATGTGCCGGTTTAT
EX763353 --> CGTTGAAGTCTAGTAAGAAAGGTCAGGGTGAGAAGAATGTGCCGGTTTAT
EX887377 --> CGTTGAAGTCTAGTAAG.................................
FD982140 --> CGTTGAAGTCTAGTAAGAAAGGTCAGGGTGAGAAGAATGTGCCGGTTTAT
FD939032 --> CGTTGAAGTCTAGTAAGAAAGG............................
EV813531 --> CGTTGAAGTCTAGTAAGAAAGGTCAGGGTGAGAAGAATGTGCCGGTTTAT
601 - 651
UN19936 --> ATTGGAGGGACTTTGATTAGGGATGGTGAATGGCTTTATGCTGATAGTGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544798 <-- ATTGGAGGGACTTTGATTAGGGATGGTGAATGGCTTTATGCTGATAGTGA
EX891540 <-- ATTGGAGGGACTTTGATTAGGGATGGTGAATGGCTTTATGCTGATAGTGA
EX767444 <-- ATTGGAGGGACTTTGATTAGGGATGGTGAATGGCTTTATGCTGATAGTGA
FD977760 <-- ATTGGAGGGACTTTGATTAGGGATGGTGAATGGCTTTATGCTGATAGTGA
FD548644 --> ATTGGAGGGACTTTGATTAGGGATGGTGAATGGCTTTATGCTGATAGTGA
EX763353 --> ATTGGAGGGACTTTGATTAGGGATGGTGAATGGCTTTATGCTGATAGTGA
EX887377 --> ..................................................
FD982140 --> ATTGGAGGGACTTTGATTAGGGATGGTGAATGGCTTTATGCTGATAGTGA
FD939032 --> ..................................................
EV813531 --> ATTGGAGGGACTTTGATTAGGGATGGTGAATGGCTTTATGCTGATAGTGA
651 - 701
UN19936 --> TGGTATCTTGATCTCCAAGACCGAACTCTCCGTCTGATCCAGAATGTTCT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544798 <-- TGGTATCTTGATCTCCAAGACCGAACTCTCCGTCTGATCCAGAATGTCCT
EX891540 <-- TGGTATCTTGATCTCCAAGACCGAACTCTCCGTCTGATCCAGAATGTTCT
EX767444 <-- TGGTATCTTGATCTCCAAGACCGAACTCTCCGTCTGATCCAGAATGTTCT
FD977760 <-- TGGTATCTTGATCTCCAAGACCGAACTCTCCGTCTGATCCAGAATGTTCT
FD548644 --> TGGTATCTTGATCTCCAAGACCGAACTCTCCGTCTGATCCAGAATGTCCT
EX763353 --> TGGTATCTTGATCTCCAAGACCGAACTCTCCGTCTGATCCAGAATGTTCT
EX887377 --> ..................................................
FD982140 --> TGGTATCTTGATCTCCAAGACCGAACTCTCCGTCTGATCCAGAATGTTCT
FD939032 --> ..................................................
EV813531 --> TGGTATCTTGATCTCCAAGACCGAACTCTCCGTCTGATCCAGAATGTTCT
701 - 751
UN19936 --> TCTGCTAAGAGATTACTGTTGGAGCTGGTTTATGTGGAATTAGTAATATT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544798 <-- TCTGCTAAGAGATTACTGTTGGAGCTGGTTTATGTGGAATTAGTAATATT
EX891540 <-- TCTGCTAAGAGATTACTGTTGGAGCTGGTTTATGTGGAATTAGTAATATT
EX767444 <-- TCTGCTAAGAGATTACTGTTGGAGCTGGTTTATGTGGAATTAGTAATATT
FD977760 <-- TCTGCTAAGAGATTACTGTTGGAGCTGGTTTATGTGGAATTAGTAATATT
FD548644 --> TCTGCTAAGAGATTACTGTTGGAGCTGGTTTATGTGGAAT..........
EX763353 --> TCTGCTAAGAGATTACTGTTGGAGCTGGTTTATGTGGAATTAGTAATATT
EX887377 --> ..................................................
FD982140 --> TCTGC.............................................
FD939032 --> ..................................................
EV813531 --> TCTGCTAAGAGATTACTGTTGGAGCTGGTTTATGTGGAATTAGTAATATT
751 - 801
UN19936 --> CGGTTTAATATTCTCAGATGAAAACGTTTTCTGCAATTTGTGAAACAATA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544798 <-- CGGTTTAATATTCTCAGATGAAAACGTTTTCTGCAATTTGTGAAACAATA
EX891540 <-- CGGTTTAATATTCTCAGATGAAAACGTTTTCTGCAATTTGTGAAACAATA
EX767444 <-- CGGTTTAATATTTTCAGATGAAAACGTTTTCTGCAATTTGTGAAACAATA
FD977760 <-- CGGTTTAATATTCTCAGATGAAAACGTTTTCTGCAATTTGTGAAACAATA
FD548644 --> ..................................................
EX763353 --> CGGTTTAATATTC.....................................
EX887377 --> ..................................................
FD982140 --> ..................................................
FD939032 --> ..................................................
EV813531 --> CGGTTTA...........................................
801 - 851
UN19936 --> TAATAATTACAAAATGTTGTTATTTTTTTTTATTCGAAACGAGCTGAAAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD544798 <-- TAATAATTAC........................................
EX891540 <-- TAATAATTACAAAATGTTGTTATTTTTTCTTATTCGAAACGAGCTGAAAC
EX767444 <-- TAATAATTACAAAATGTTGTT.............................
FD977760 <-- TAATAATTACAAAATGTTGTTATTTTTTTTTATTCGAAACGAGCTGAAAC
FD548644 --> ..................................................
EX763353 --> ..................................................
EX887377 --> ..................................................
FD982140 --> ..................................................
FD939032 --> ..................................................
EV813531 --> ..................................................
851 - 901
UN19936 --> CTTTATTTATTTTGTTACTTCTCC
~~~~~~~~~~~~~~~~~~~~~~~~
FD544798 <-- ........................
EX891540 <-- CTTTATTTATTTTGTTACTTCTCC
EX767444 <-- ........................
FD977760 <-- CTTTATTTATTTTGTT........
FD548644 --> ........................
EX763353 --> ........................
EX887377 --> ........................
FD982140 --> ........................
FD939032 --> ........................
EV813531 --> ........................
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