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Alignment for radish unigene UN19949

               1      -     51
UN19949        --> ATACAATCAGAGAGCATTATTATGTTCTTTGCCTCCACAATCCAAATCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD981094       <-- ..................................................
EX765899       <-- ..................................................
EV569660       <-- ..................................................
EV552553       <-- ..................................................
FD558299       <-- ..................................................
EV568334       <-- ..................................................
EY898989       <-- ..................................................
EX746530       <-- ..................................................
EY897791       <-- ..................................................
EX750406       <-- ..................................................
FD990102       <-- ..................................................
FD554227       --> ATACAATCAGAGAGCATTATTATGTTCTTTGCCTCCACAATCCAAATCCG
EY894880       --> ..................................................
FD985793       --> ..................................................
EX769609       --> ..................................................
EV574151       --> ..................................................
EY894003       --> ..................................................

               51     -    101
UN19949        --> AAAGGTATAAGATACTCTCTGTTTAAACCATTGTGAAACTGCCCCATCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD981094       <-- ............................acaTGTGAAACTGCCC-ATCCA
EX765899       <-- ..................................................
EV569660       <-- ..................................................
EV552553       <-- ..................................................
FD558299       <-- ..................................................
EV568334       <-- ..................................................
EY898989       <-- ..................................................
EX746530       <-- ..................................................
EY897791       <-- ..................................................
EX750406       <-- ..................................................
FD990102       <-- ..................................................
FD554227       --> AAAGGTATAAGATACTCTCTGTTTAAACCATTGTGAAACTGCCCCATCCA
EY894880       --> ...GGTATAAGATACTCTCTGTTTAAACCATTGTGAAACTGCCCCATCAA
FD985793       --> ........AAGATACTCTCTGTTTAAACCATTGTGAAACTGCCCCATCCA
EX769609       --> ..................................................
EV574151       --> ..................................................
EY894003       --> ..................................................

               101    -    151
UN19949        --> AATACAGCAAGCAATGTAACGTAAGAATATTAAGTATCCCACAAAACCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD981094       <-- A-TACAGCAAGCAATGTAACGTAAGAATAT-AAGTATCCCACAAAACCCC
EX765899       <-- ..................................................
EV569660       <-- ..................................................
EV552553       <-- ..................................................
FD558299       <-- ..................................................
EV568334       <-- ..................................................
EY898989       <-- ..................................................
EX746530       <-- ..................................................
EY897791       <-- ..................................................
EX750406       <-- ..................................................
FD990102       <-- ..................................................
FD554227       --> AATACAGCAAGCAATGTAACGTAAGAATATTAAGTATCCCACAAAACCCC
EY894880       --> AATACAGCAAGCAATGTAACGTAAGAATATTAAGTATCCCACAAAACCCC
FD985793       --> AATACAGCAAGCAATGTAACGTAAGAATATTAAGTATCCCACAAAACCCC
EX769609       --> ...................................ATCCCACAAAACCCC
EV574151       --> .....................................CCCACAAAACCCC
EY894003       --> .....................................CCCACAAAACCCC

               151    -    201
UN19949        --> CTCTTATTCATATCATAAATATAACGAAGCGTGAGAGA--CACACACACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD981094       <-- -TCTTAT-CATATCATAA-TATAACGAAGCGTGAG-GA--CACACACACA
EX765899       <-- ..................................................
EV569660       <-- ..................................................
EV552553       <-- ..................................................
FD558299       <-- ..................................................
EV568334       <-- ..................................................
EY898989       <-- ..................................................
EX746530       <-- ..................................................
EY897791       <-- ..................................................
EX750406       <-- ..................................................
FD990102       <-- ..................................................
FD554227       --> CTCTTATTCATATCATAAATATAACGAAGCGTGAGAGA--CACACACACA
EY894880       --> CTCTTATTCATATCATAAATATAACGAAGCGTGAGAGAAACACACACACA
FD985793       --> CTCTTATTCATATCATAAATATAACGAAGCGTGAGAGA--CACACACACA
EX769609       --> CTCTTATTCATATCATAAATATAACGAAGCGTGAGAGA--CACACACACA
EV574151       --> CTCTTATTCATATCATAAATATAACGAAGCGTGAGAGA--CACACACACA
EY894003       --> CTCTTATTCATATCATAAATATAACGAAGCGTGAGAGA--CACACACACA

               201    -    251
UN19949        --> CACTCCTTTAGTTTCAGCATACTCAATACAATGTCACAACTCTTTTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD981094       <-- CACTCCTTTAGTT-CAGCATACTCAATACAATGTCACAACTCTTTTTTT-
EX765899       <-- ...........................................TTTTTTT
EV569660       <-- ..................................................
EV552553       <-- ..................................................
FD558299       <-- ..................................................
EV568334       <-- ..................................................
EY898989       <-- ..................................................
EX746530       <-- ..................................................
EY897791       <-- ..................................................
EX750406       <-- ..................................................
FD990102       <-- ..................................................
FD554227       --> CACTCCTTTAGTTTCAGCATACTCAATACAATGTCACAACTCTTTTTTTT
EY894880       --> CACTCCATTAGTTTCAGCATACTCAATACAATGTCACAACTCTTTTTTTT
FD985793       --> C--TCCTTTAGTTTCAGCATACTCAATACAATGTCACAACTCTTTTTTTT
EX769609       --> CACTCCTTTAGTTTCAGCATACTCAATACAATGTCACAACTCTTTTTTTT
EV574151       --> C--TCCTTTAGTTTCAGCATACTCAATACAATGTCACAACTCTTTTTTTT
EY894003       --> C--TCCATTAGTTTCAGCATACTCAATACAATGTCACAACTCTTTTTTTT

               251    -    301
UN19949        --> CAGTTGTATTCTGCTGCTATTTCCTGTAGCAGTTGAGAAAGCTGTTGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD981094       <-- CAGTTGTATTCTGCTGCTATTTCCTGTAGCAGTTGAGAAAGCTGTTGAGG
EX765899       <-- CAGT-GTA-TCTGCTGCTAT--TCTGTAGCAGT-GAGAAAGCTGT-GAGG
EV569660       <-- CAGTTGTAT-CTGCTGCTATTTCCTGTAGCAGTTGAGAAAGCTGTTGAGG
EV552553       <-- ..................ATTTCCTGTAGCAGTTGAGAAAGCTGTTGAGG
FD558299       <-- .........................GTAGCAGT-GAGAAAGCTGT-GAGG
EV568334       <-- ...........................AGCAGTTGAGAAAGCTGTTGAGG
EY898989       <-- ..................................................
EX746530       <-- ..................................................
EY897791       <-- ..................................................
EX750406       <-- ..................................................
FD990102       <-- ..................................................
FD554227       --> CAGTTGTATTCTGCTGCTATTTCCTGTAGCAGTTGAAAAAGCTGTTGAGG
EY894880       --> CAGTTGTATTCTGCTGCTATTTCCTGTAGCAGTTGAAAAAGCTGTTGAGG
FD985793       --> CAGTTGTATTCTGATGCTATTTCCTGTAGCAGTTGAAAAAGCTGTTGAGG
EX769609       --> CAGTTGTATTCTGCTGCTATTTCCTGTAGCAGTTGAAAAAGCTGTTGAGG
EV574151       --> CAGTTGTATTCTGCTGCTATTTCCTGTAGCAGTTGAGAAAGCTGTTGAGG
EY894003       --> CAGTTGTATTCTGCTGCTATTTCCTGTAGCAGTTGAGAAAGCTGTTGAGG

               301    -    351
UN19949        --> TTTAGTGATCATAGCCATGTGACCAGCTTCTTCAACCACTTTCACTTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD981094       <-- TTTAGTGATCATAGCCATGTGACCAGCTTCTTCAACCACTTTTACTTCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765899       <-- TTTAGTGATCATAGCCATGTGACCAGCT-CTTCAACCACTTT-ACTTC-A  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569660       <-- TTTAGTGATCATAGCCATGTGACCAGCTTCTTCAACCACTTTTACTTCAT  Raphanus raphanistrum subsp. landra
EV552553       <-- TTTAGTGATCATAGCCATGTGACCAGCTTCTTCAACCACTTTCACTTCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD558299       <-- TT-AGTGATCATAGCCATGTGACCAGCT-C-TCAACCACTT-CACTTCGT  Raphanus raphanistrum subsp. landra
EV568334       <-- TTTAGTGATCATAGCCATGTGACCAGCTTCTTCAACCACTTTCACTTCGT  Raphanus raphanistrum subsp. landra
EY898989       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX746530       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY897791       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX750406       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD990102       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD554227       --> TTTAGTGATCATAGCCATGTGACCAGCTTCTTCAACCACTTTCACTTCGT  Raphanus raphanistrum subsp. landra
EY894880       --> TTTAGTGATCATAGCCATGTGACCAGCTTCTTCAACCACTTTCACTTCGT  Raphanus raphanistrum subsp. maritimus
FD985793       --> TTTAGTGATCATAGCCATGTGACCAGCTTCTTCAACCACTTTCACTTCGT  Raphanus raphanistrum subsp. landra
EX769609       --> TTTAGTGATCATAGCCATGTGACCAGCTTCTTCAACCACTTTTACTTCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV574151       --> TTTAGTGATCATAGCCATGTGACCAGCTTCTTCAACCACTTTTACTTCAT  Raphanus raphanistrum subsp. landra
EY894003       --> TTTAGTGATCATAGCCATGTGACCAGCTTCTTCAACCACTTTCACTTCGT  Raphanus raphanistrum subsp. maritimus

               351    -    401
UN19949        --> TAGGTTCGTAGTTACTAATCATCCACTTCTGAATCTCCTCTGGAACCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD981094       <-- TAGGTTCGTAGTTACTAATCATCCACTTCTGAATCTCCTCTGGAACCACA
EX765899       <-- TAGG-TCGTAGTTACTAATCATCCACTTCTGAATCTC-TCTGGAACCACA
EV569660       <-- TAGGTTCGTAGTTACTAATCATCCACTTCTGAATCTCCTCTGGAACCACA
EV552553       <-- TAGGTTCGTAGTTACTAATCATCCACTTTTGAATCTCCTCTGGAACCACA
FD558299       <-- -AGGTTCGTAGT-ACT-ATCATCCACT-CTG-ATCTCCTCTGGAACCACA
EV568334       <-- TAGGTTCGTAGTTACTAATCATCCACTTCTAAATCTCCTCTGGAACCACA
EY898989       <-- ..................................................
EX746530       <-- ..................................................
EY897791       <-- ..................................................
EX750406       <-- ..................................................
FD990102       <-- ..................................................
FD554227       --> TAGGTTCGTAGTTACTAATCATCCACTTCTGAATCTCCTCTGGAACCACA
EY894880       --> TAGGTTCGTAGTTACTAATCATCCACTTCTGAATCTCCTCTGGAACCACA
FD985793       --> TAGGTTCGTAGTTACTAATCATCCACTTCTGAATCTCCTCTGGAACCACA
EX769609       --> TAGGTTCGTAGTTACTAATCATCCACTTCTGAATCTCCTCTGGAACCACA
EV574151       --> TAGGTTCGTAGTTACTAATCATCCACTTCTGAATCTCCTCTGGAACCACA
EY894003       --> TAGGTTCGTAGTTACTAATCATCCACTTCTGAATCTCCTCTGGAACCACA

               401    -    451
UN19949        --> TTGTCGCCTTCGCAGACGATATACACTCTCTTCCCAGATCCATACCCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD981094       <-- TTGTCGCCTTCGCAGACGATATACGCTCTCTTCCCAGATCCATACCCTTC
EX765899       <-- TTGTCGC-TTCGCAGACGATATACGCTCTCTTCCCAGATCCATACCCTTC
EV569660       <-- TTGTCGCCTTCGCAGACGATATACGCTCTCTTCCCAGATCCATACCCTTC
EV552553       <-- TTGTCGCTTTCGCGGACGATATACACTCTCTTCCCAGATCCATACCCCTC
FD558299       <-- TTGTCGC-TTCGCAGACGATATACACTCTCTTCCCAGATCCATACCCTTC
EV568334       <-- TTGTCGCCTCCGCAGACGATATACACTCTCTTCCCAGATCCATACCCTTC
EY898989       <-- ..................................................
EX746530       <-- ..................................................
EY897791       <-- ..................................................
EX750406       <-- ..................................................
FD990102       <-- ..................................................
FD554227       --> TTGTCGCCTTCGCAGACGATATACACTCTCTTCCCAGATCCATACCCTTC
EY894880       --> TTGTCGCCTTCGCAGACGA...............................
FD985793       --> TTGTCGCCTTCGCAGACGATATACACTCTCTTCCCAGATCCATACCCTTC
EX769609       --> TTGTCGCCTTCGCAGACGATATACGCTCTCTTCCCAGATCCATACCCTTC
EV574151       --> TTGTCGCCTTCGCAGACGATATACGCTCTCTTCCCAGATCCATACCCTTC
EY894003       --> TTGTCGCCTTCGCAGACGATATACACTCTCTTCCCAGATCCATACCCTTC

               451    -    501
UN19949        --> CTTGGTCAGCAAATCTTTACTTTCCATTTCCTTTGGGTATAACCAGCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD981094       <-- CTTGGTCAGCAAATCTTTACTTTCCATTTCCTTTGGGTATAACCAGCTCG
EX765899       <-- CTTGGTCAGCAAATCTTTACTTTCCATTTCCTTTGGGTATAACCAGCTCG
EV569660       <-- CTTGGTCAGCAAATCTTTACTTTCCATTTCCTTTGGGTATAACCAGCTCG
EV552553       <-- CTTGGTCAGCAAATCTTTACTTTCCATTTCCTTTGGGTATAACCAGCTCG
FD558299       <-- CTTGGTCAGCAAATCTTTACTTTCCATTTCCTTTGGGTATAACCAGCTCG
EV568334       <-- CTTGGTCAGCAAATCTTTACTTTCCATTTCCTTTGGGTATAACCAGCTCG
EY898989       <-- ...GGTCAGCAAATCTTTACTTTCCATTTCCTTTGGGTATAACCAGCTCG
EX746530       <-- ....GTCAGCAAATCTTTACTTTCCATTTCCTTTGGGTATAACCAGCTCG
EY897791       <-- .....TCAGCAAATCTTTACTTTCCATTTCCTTTGGGTATAACCAGCTCG
EX750406       <-- ........................ccaTTCCTTTGGGTATAACCAGTTCG
FD990102       <-- ...........................tttCTTTGGGTATAACCAGCTCG
FD554227       --> CTTGGTCAGCAAATCTTTACTTTCCATTTCCTTTGGGTATAACCAGCTCG
EY894880       --> ..................................................
FD985793       --> CTTGGTCAGCAAATCTTTACTTTCCATTTCCTTTGGGTATAACCAGCTCG
EX769609       --> CTTGGTCAGCAAATCTTTACTTTCCATTTCCTTTGGGTATAACCAGCTCG
EV574151       --> CTTGGTCAGCAAATCTTTACTTTCCATTTCCTTTGGGTATAACCAGCTCG
EY894003       --> CTTGGTCAGCAAATCTTTACTTTCCATTTCCTTTGGGTATAACCAGCTCG

               501    -    551
UN19949        --> GTTTCACCAACGCCATGGCTAGTTCTATATCCTCTGACTGGCAATTACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD981094       <-- GTTTCACCAACGCCATGGCTAGTTCTATATCCTCTGACTGGCAATTACTG
EX765899       <-- GTTTCACCAACGCCATGGCTAGTTCTATATCCTCTGACTGGCAATTACTG
EV569660       <-- GTTTCGCCAACGCCATGGCTAGTTCTATATCCTCTGACTGGCAATTACTG
EV552553       <-- GTTTCACCAACGCCATGGCTAGTTCTATATCCTCTGACTGGCAATTACTG
FD558299       <-- GTTCCACCAACGCCATGGCTAGTTCTATATCCTCTGACTGGCAATTACTG
EV568334       <-- GTTTCACCAACGCCATGGCTAGTTCTATATCCTCTGACTGGCAATTACTG
EY898989       <-- GTTTCACCAACGCCATGGCTAGTTCTATATCCTCTGACTGGCAATTACTG
EX746530       <-- GTTTCACCAACGCCATGGCTAGTTCTATATCCTCTGACTGGCAATTACTG
EY897791       <-- GTTTCACCAACGCCATGGCTAGTTCTATATCCTCTGACTGGCAATTACTG
EX750406       <-- GTTTCACCAACGCCATGGCTAGTTCTATATCCTCTGACTGGCAATTACTG
FD990102       <-- GTTTCACCAACGCCATGGCTAGTTCTATATCCTCTGACTGGCAATTACTG
FD554227       --> GTTCCACCAACGCCATGGCTAGTTCTATATCCTCTGACTGGCAATTACTG
EY894880       --> ..................................................
FD985793       --> GTTTCACCAACGCCATGGCTAGTTCTATATCCTCTGACTGGCAATTACTG
EX769609       --> GTTTCACCAACGCCATGGCTAGTTCTATATCCTCTGACTGGCAATTACTG
EV574151       --> GTTTCGCCAACGCCATGGCTAGTTCTATATCCTCTGACTGGCAATTACTG
EY894003       --> GTTTCACCAACGCCATGGCTAGTTCTATATCCTCTGACTGGCAATTACTG

               551    -    601
UN19949        --> TAAGCCTTCTCCTTCATGAAACTATTACCGAACATAACTGAACTTGGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD981094       <-- TAAGCCTTCTCCTTCATGAAACTATTACCGAACATAACTGAACTTGGCGG
EX765899       <-- TAAGCCTTCTCCTTCATGAAACTATTACCGAACATAACTGAACTTGGCGG
EV569660       <-- TAAGCCTTCTCCTTCATGAAACTATTACCGAACATAACTGAACTTGGCGG
EV552553       <-- TATGCCTTCTCCTTCATGAAACTATTACCGAACATAACTGAACTTGGCGG
FD558299       <-- TAAGCCTTCTCCTTCATGAAACTATTACCGAGCATAACTGAACTTGGCGG
EV568334       <-- TAAGCCTTCTCCTTCATGAAACTATTACCGAACATAACTGAACTTGGCGG
EY898989       <-- TAAGCCTTCTCCTTCATGAAACTATTACCGAACATAACTGAACTTGGCGG
EX746530       <-- TAAGCCTTCTCCTTCATGAAACTATTACCGAACATAACTGAACTTGGCGG
EY897791       <-- TAAGCCTTCTCCTTCATGAAACTATTACCGAACATAACTGAACTTGGCGG
EX750406       <-- TAAGCCTTCTCCTTCATGAAACTATTACCGAACATAACTGAACTTGGCGG
FD990102       <-- TAAGCCTTCTCCTTCATGAAACTATTACCGAACATAACTGAACTTGGCGG
FD554227       --> TAAGCCTTCTCCTTCATGAAACTATTACCGAGCATAACTGAACTTGGCGG
EY894880       --> ..................................................
FD985793       --> TAAGCCTTCTCCTTCATGAAACTATTACCGAACATAACTGAACTTGGCGG
EX769609       --> TAAGCCTTCTCCTTCATGAAACTATTACCGAACATAACTGAACTTGGCGG
EV574151       --> TAAGCCTTCTCCTTCATGAAACTATTACCGAACATAACTGAACTTGGCGG
EY894003       --> TAAGCCTTCTCCTTCATGAAACTATTACCGAACATAACTGAACTTGGCGG

               601    -    651
UN19949        --> CTGTCCTGGTCCTTCCTCGAATGTAAACTCACAATCCATGGCGAATCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD981094       <-- CTGTCCTGGTCCTTCCTCGAATGTAAACTCACAATCCATGGCGAATCCAT
EX765899       <-- CTGTCCTGGTCCTTCCTCGAATGTAAACTCACAATCCATGGCGAATCCAT
EV569660       <-- CTGTCCTGGTCCTTCCTCGAATGTAAACTCACAATCCATGGCGAATCCAT
EV552553       <-- CTGTCCTGGTCCTTCCTCGAATGTAAACTCACAATCCATGGCGAATCCAT
FD558299       <-- CTGTCCTGGTCCTTCCTCGAATGTAAACTCACAATCCATGGCGAATCCAT
EV568334       <-- CTGTCCTGGTCCTTCCTCGAATGTAAACTCACAATCCATGGCGAATCCAT
EY898989       <-- CTGTCCTGGTCCTTCCTCGAATGTAAACTCACAATCCATGGCGAATCCAT
EX746530       <-- CTGTCCTGGTCCTTCCTCGAATGTAAACTCACAATCCATGGCGAATCCAT
EY897791       <-- CTGTCCTGGTCCTTCCTCGAATGTAAACTCACAATCCATGGCGAATCCAT
EX750406       <-- CTGTCCTGGTCCTTCCTCGAATGTAAACTCACAATCCATGGCGAATCCAT
FD990102       <-- CTGTCCTGGTCCTTCCTCGAATGTAAACTCACAATCCATGGCGAATCCAT
FD554227       --> CTGTCCTGGTCCTTCCTCGAATGTAAACTCACAATCCATGGCGAAT....
EY894880       --> ..................................................
FD985793       --> CTGTCCTGGTCCTTCCTCGAATGTAAACTCACAATCCATGGCGAATCCAT
EX769609       --> CTGTCCTGGTCCTTCCTCGAATGTAAACTCACAATCCATGGCGAATCCAT
EV574151       --> CTGTCCTGGTCCTTCCTCGAATGTAAACTCACAATCCATGGCGAATCCAT
EY894003       --> CTGTCCTGGTCCTTCCTCGAATGTAAACTCACAATCCATGGCGAATCCAT

               651    -    701
UN19949        --> CAGGGAGACGTTTGAAATACTCTTGAATGAGAACGGAAGGAGGAGACTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD981094       <-- CAGGGAGACGTTTGAAATACTCTTGAATGAGAACGGAAGGAGGAGACTCA
EX765899       <-- CAGGGAGACGTTTGAAATACTCTTGAATGAGAACGGAAGGAGGAGACTCA
EV569660       <-- CAGGGAGACGTTTGAAATACTCTTGAATGAGAACGGAAGGAGGAGACTCA
EV552553       <-- CAGGGAGACGTTTGAAATACTCTTGAATGAGAACGGAAGGAGGAGACTCA
FD558299       <-- CAGGGAGACGTTTGAAATACTCTTGAATGAGAACGGAAGGAGGAGACTCA
EV568334       <-- CAGGGAGACGTTTGAAATACTCTTGAATGAGAACGGAAGGAGGAGACTCA
EY898989       <-- CAGGGAGACGTTTGAAATACTCTTGAATGAGAACGGAAGGAGGAGACTCA
EX746530       <-- CAGGGAGACGTTTGAAATACTCTTGAATGAGAACGGAAGGAGGAGACTCA
EY897791       <-- CAGGGAGACGTTTGAAATACTCTTGAATGAGAACGGAAGGAGGAGACTCA
EX750406       <-- CAGGGAGACGTTTGAAATACTCTTGAATGAGAACGGAAGGAGGAGACTCA
FD990102       <-- CAGGGAGACGTTTGAAATACTCTTGAATGAGAACGGAAGGAGGAGACTCA
FD554227       --> ..................................................
EY894880       --> ..................................................
FD985793       --> CAGGGAGACGTTTGAAATACTCTTGAATGAGAACGGAAGGAGGAGACTCA
EX769609       --> CAGGGAGACGTTTGAAATACTCTTGAATGAAAACGGAAGGAGGAGACTCA
EV574151       --> CAGGGAGACGTTTGAAATACTCTTGAATGAGAACGGAAGGAGGAGACTCA
EY894003       --> CAGGGAGACGTTTGAAATACTCTTGAATGAGAACGGAAGGAGGAGACTCA

               701    -    751
UN19949        --> TGGTGTGGCATATAAGCAGAGATGAAGATTCCGACAGAGATTTTGGTCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD981094       <-- TGGTGTGGCATATAAGCAGAGATGAAGATTCCGACAGAGATTTTGGTCGG
EX765899       <-- TGGTGTGGCATATAAGCAGAGATGAAGATTCCGACAGAGATTTTGGTCGG
EV569660       <-- TGGTGTGGCATATAAGCAGAGATGAAGATTCCGACAGAGATTTTGGTCGG
EV552553       <-- TGGTGTGGCATATAAGCAGAGATGAAGATTCCGACAGAGATTTTGGTCGG
FD558299       <-- TGGTGTGGCATATAAGCAGAGATGAAGATTCCGACAGAGATTTTGGTCGG
EV568334       <-- TGGTGTGGCATATAAGCAGAGATGAAGATTCCGACAGAGATTTTGGTCGG
EY898989       <-- TGGTGTGGCATATAAGCAGAGATGAAGATTCCGACAGAGATTTTGGTCGG
EX746530       <-- TGGTGTGGCATATAAGCAGAGATGAAGATTCCGACAGAGATTTTGGTCGG
EY897791       <-- TGGTGTGGCATATAAGCAGAGATGAAGATTCCGACAGAGATTTTGGTCGG
EX750406       <-- TGGTGTGGCATATAAGCAGAGATGAAGATTCCGACAGAGATTTTGGTCGG
FD990102       <-- TGGTGTGGCATATAAGCAGAGATGAAGATTCCGACAGAGATTTTGGTCGG
FD554227       --> ..................................................
EY894880       --> ..................................................
FD985793       --> TGGT..............................................
EX769609       --> TGGTGTGGCATATAA...................................
EV574151       --> TGGTGTGGCATATAAGCAGAGATGAAGATTCCGACAGAGATTTTGGTCGG
EY894003       --> TGGTGTGGCATATAAGCAGAGATGAAGATTCCGACAGAGATTTTGGTCGG

               751    -    801
UN19949        --> AAACCTTTCCATAGCGAGAGAGGTTCCAATGCCACCATAGCTATGACCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD981094       <-- AAACCTTTCCATAGCGAGAGAGGTTCCAATGCCACCATAGCTATGACCAA
EX765899       <-- AAACCTTTCCATAGCGAGAGAGGTTCCAATGCCACCATAGCTATGACCAA
EV569660       <-- AAACCTTTCCATAGCGAGAGAGGTTCCAATGCCACCATAGCTATGACCAA
EV552553       <-- AAACCTTTCCATTGCGAGAGAGGTTCCAATGCCACCATAGCTATGACCAA
FD558299       <-- AAACCTTTCCATAGCGAGAGAGGTTCCAATGCCACCATAGCTATGACCAA
EV568334       <-- AAACCTTTCCATAGCGAGAGAGGTTCCAATGCCACCATAGCTATGACCAA
EY898989       <-- AAACCTTTCCATAGCGAGAGAGGTTCCAATGCCACCATAGCTATGACCAA
EX746530       <-- AAACCTTTCCATAGCGAGAGAGGTTCCAATGCCACCATAGCTATGACCAA
EY897791       <-- AAACCTTTCCATAGCGAGAGAGGTTCCAATGCCACCATAGCTATGACCAA
EX750406       <-- AAACCTTTCCATAGCGAGAGAGGTTCCAATGCCACCATAGCTATGACCAA
FD990102       <-- AAACCTTTCCATAGCGAGAGAGGTTCCAATGCCACCATAGCTATGACCAA
FD554227       --> ..................................................
EY894880       --> ..................................................
FD985793       --> ..................................................
EX769609       --> ..................................................
EV574151       --> AAACCTTTCCATAGCGAGAGAGGTTCCAATGCCACCATAGCTATGACCAA
EY894003       --> AAACCTTTCCATAGCGAGAGAGGTTCCAATGCCACCATAG..........

               801    -    851
UN19949        --> CAAGGACCACCTTCTCTTCCTCAGGAAGGGCCTCCATGAAACTCATCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD981094       <-- CAAGGACCACCTTCTCTTCCTCAGGAAGGGCCTCCATGAAACTCATCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765899       <-- CAAGGACCACCTTCTCTTCCTCAGGAAGGGCCTCCATGAAACTCATCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV569660       <-- CAAGGACCACCTTCTCTTCCTCAGGAAGGGCCTCCATGAAACTCATCAAA  Raphanus raphanistrum subsp. landra
EV552553       <-- CAAGGACCACCTTCTCTTCCTCAGGAAGGGCCTCCATGAAACTCATCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD558299       <-- CAAGGACCACCTTCTCTTCCTCAGGAAGGGCCTCCATGAAACTCATCAAA  Raphanus raphanistrum subsp. landra
EV568334       <-- CAAGGACCACCTTCTCTTCCTCAGGAAGGGCCTCCATGAAACTCATCAAA  Raphanus raphanistrum subsp. landra
EY898989       <-- CAAGGACCACCTTTTCTTCCTCAGGAAGGGCCTCCATGAAACTCATCAAA  Raphanus raphanistrum subsp. maritimus
EX746530       <-- CAAGGACCACCTTTTCTTCCTCAGGAAGGGCCTCCATGAAACTCATCAAA  Raphanus raphanistrum subsp. maritimus
EY897791       <-- CAAGGACCACCTTTTCTTCCTCAGGAAGGGCCTCCATGAAACTCATCAAA  Raphanus raphanistrum subsp. maritimus
EX750406       <-- CAAGGACCACCTTTTCTTCCTCAGGAAGGGCCTCCATGAAACTCATCAAA  Raphanus raphanistrum subsp. maritimus
FD990102       <-- CAAGGACCACCTTCTCTTCCTCAGGAAGGGCCTCCATGAAACTCATCAAA  Raphanus raphanistrum subsp. landra
FD554227       --> ..................................................  Raphanus raphanistrum subsp. landra
EY894880       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD985793       --> ..................................................  Raphanus raphanistrum subsp. landra
EX769609       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV574151       --> CAAGGACCACCTTCTCTTCCTCAGGAAGGGCCTCCATGAAACTCATCAAA  Raphanus raphanistrum subsp. landra
EY894003       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               851    -    901
UN19949        --> GGCTCTAGATACTCGGAAACAGAACGAACCTCGTCGAGCCTCCTCTTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD981094       <-- GGCTCTAGATACTCGGAAACAGAACGAACCTCc.................
EX765899       <-- GGCTCTAGATACTCGGAAACAGAACGAACCTCGTCGAGCCTCCTCTTGTC
EV569660       <-- GGCTCTAGATACTCGGAAACAGAACGAACCTCGTCGAGCCTCCTCTTGTC
EV552553       <-- GGCTCTAGATACTCGGAAACAGAACGAACCTCGTCGAGCCTCCTCTTGTC
FD558299       <-- GGCTCTAGATACTCGGAAACAGAACGAACCTCGTCGAGCCTCCTCTTGTC
EV568334       <-- GGCTCTAGATACTCGGAAACAGAACGAACCTCGTCGAGCCTCCTCTTGTC
EY898989       <-- GGCTCTAGATACTCGGAAACAGAACGAACCTCGTCGAGCCTCCTCTTGTC
EX746530       <-- GGCTCTAGATACTCGGAAACAGAACGAACCTCGTCGAGCCTCCTCTTGTC
EY897791       <-- GGCTCTAGATACTCGGAAACAGAACGAACCTCGTCGAGCCTCCTCTTGTC
EX750406       <-- GGCTCTAGATACTCGGAAACAGAACGAACCTCGTCGAGCCTCCTCTTGTC
FD990102       <-- GGCTCTAGATACTCGGAAACAGAACGAACCTCGTCGAGCCTCCTCTTGTC
FD554227       --> ..................................................
EY894880       --> ..................................................
FD985793       --> ..................................................
EX769609       --> ..................................................
EV574151       --> GGCTCTAGATACTCGGAAACAGAACGAACCTCGTCGAGCCTCCTCTTGTC
EY894003       --> ..................................................

               901    -    951
UN19949        --> GATACCGGACCCACCTAGTTCAATAGCTGTCACTCGTTGACCGTTGGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD981094       <-- ..................................................
EX765899       <-- GATACCGGACCCACCTAGTTCAATAGCTGTCACTCGTTGACCGTTGGCCT
EV569660       <-- GATACCGGACCCACCTAGTTCAATAGCTGTCACTCGTTGACCGTTGGCCT
EV552553       <-- GATACCGGACCCGCCTAGTTCAATAGCTGTCACTCGTTGACCGTTGGCCT
FD558299       <-- GATACCGGACCCACCTAGTTCAATAGCTGTCACTCGTTGACCGTTGGCCT
EV568334       <-- GATACCGGACCCACCTAGTTCAATAGCTGTCACTCGTTGACCGTTGGCCT
EY898989       <-- GATACCGGACCCACCTAGTTCAATAGCTGTCACTCGTTGACCGTTGGCCT
EX746530       <-- GATACCGGACCCACCTAGTTCAATAGCTGTCACTCGTTGACCGTTGGCCT
EY897791       <-- GATACCGGACCCACCTAGTTCAATAGCTGTCACTCGTTGACCGTTGGCCT
EX750406       <-- GATACCGGACCCACCTAGTTCAATAGCTGTCACTCGTTGACCGTTGGCCT
FD990102       <-- GATACCGGACCCACCTAGTTCAATAGCTGTCACTCGTTGACCGTTGGCCT
FD554227       --> ..................................................
EY894880       --> ..................................................
FD985793       --> ..................................................
EX769609       --> ..................................................
EV574151       --> GATACCGGACCCACCTAGTTCAATAGCTGTCACTCGTTGACCGTTGGCCT
EY894003       --> ..................................................

               951    -   1001
UN19949        --> TGAGCTTTCCAGCCAGCTTGAACCAGCACCATGCTCCATGACATGATCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD981094       <-- ..................................................
EX765899       <-- TGAGCTTTCCAGCCAGCTTGAACCAGCACCATGCTCCATGACATGATCCG
EV569660       <-- TGAGCTTTCCAGCCAGCTTGAACCAGCACCATGCTCCATGACATGATCCG
EV552553       <-- TGAGCTTTCCAGCCAGCTTGAACCAGCACCATGCTCCATGACATGATCCG
FD558299       <-- TGAGCCTTCCAGCCAGCTTGAACCAGCACCATGCTCCATGACATGATCCG
EV568334       <-- TGAGCTTTCCAGCCAGCTTGAACCAGCACCATGCTCCATGACATGATCCG
EY898989       <-- TGAGCTTTCCAGCCAGCTTGAACCAGCACCATGCTCCATGACATGATCCG
EX746530       <-- TGAGCTTTCCAGCCAGCTTGAACCAGCACCATGCTCCATGACATGATCCG
EY897791       <-- TGAGCTTTCCAGCCAGCTTGAACCAGCACCATGCTCCATGACATGATCCG
EX750406       <-- TGAGCTTTCCAGCCAGCTTGAACCAGCACCATGCTCCATGACATGATCCG
FD990102       <-- TGAGCTTTCCAGCCAGCTTGAACCAGCACCATGCTCCATGACATGATCCG
FD554227       --> ..................................................
EY894880       --> ..................................................
FD985793       --> ..................................................
EX769609       --> ..................................................
EV574151       --> TGAGCTTTCCAGCCAGCTTGAACCAGCACCATGCTCCATGACATGATCCG
EY894003       --> ..................................................

               1001   -   1051
UN19949        --> TGGACAAGCACGAAATGGTGGTGGTGGTGTTGTTGCATGTGCTGTGTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD981094       <-- ..................................................
EX765899       <-- TGGACAAGCACGAAATGGTGGTGGTGGTGTTGTTGCATGTGCTGTGTTTG
EV569660       <-- TGGACAAGCACGAAATGGTGGTGGTGGTGTTGTTGCATGTGCTGTGTTTG
EV552553       <-- TGGACAAGCACGAAATGGTGGTGGTGGTGGTGTTGCATGTGCTGTGTTTG
FD558299       <-- TGGACAAGCACGAAATGGTGGTGGTGGTGTTGTTGCATGTGTTGTGTTTG
EV568334       <-- TGGACAAGCACGAAATGGTGGTGGTGGTGTTGTTGCATGTGCTGTGTTTG
EY898989       <-- TGGACAAGCACGAAATGGTGGTGGTGGTGTTGTTGCATGTGCTGTGTTTG
EX746530       <-- TGGACAAGCACGAAATGGTGGTGGTGGTGTTGTTGCATGTGCTGTGTTTG
EY897791       <-- TGGACAAGCACGAAATGGTGGTGGTGGTGTCGTTGCATGTGCTGTGTTTG
EX750406       <-- TGGACAAGCACGAAATGGTGGTGGTGGTGTTGTTGCATGTGCTGTGTTTG
FD990102       <-- TGGACAAGCACGAAATGGTGGTGGTGGTGTTGTTGCATGTGCTGTGTTTG
FD554227       --> ..................................................
EY894880       --> ..................................................
FD985793       --> ..................................................
EX769609       --> ..................................................
EV574151       --> TG-ACAAGCACGAAATGGTGGT............................
EY894003       --> ..................................................

               1051   -   1101
UN19949        --> CATTTGATATTGTTTGGTAAGCGATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD981094       <-- ...........................
EX765899       <-- CATTTGATATTGTTTGGTAAGCGATCC
EV569660       <-- CATTTGATATTGTTTGGTAAGCGATCC
EV552553       <-- CATTTGATATTGTTTGGccc.......
FD558299       <-- CATTTGATATTGTTTGGTAAGCGATCC
EV568334       <-- CATTTGATATTGTTTGGTAAGCGATCC
EY898989       <-- CATTTGATATTGTTTGGTAAGCGcc..
EX746530       <-- CATTTGATATTGTTTGGTAAGCcc...
EY897791       <-- CATT-GATATTGTTTGGTAAGCcc...
EX750406       <-- CATTTGATATTGTTTGGTAAGCcc...
FD990102       <-- CATTTGATATTGTTTGGTAAGCcc...
FD554227       --> ...........................
EY894880       --> ...........................
FD985793       --> ...........................
EX769609       --> ...........................
EV574151       --> ...........................
EY894003       --> ...........................