Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN19959

               1      -     51
UN19959        --> AAACCATCATAAATACCATCACCGGATTCACATGATTCCACAACTCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD584328       <-- ..................................................
EW730706       <-- ..................................................
EW738727       <-- ..................................................
EV545292       <-- ..................................................
EX900636       <-- ..................................................
EV572511       <-- ..................................................
FD984349       <-- ..................................................
EX769611       <-- ..................................................
EV549913       --> AAACCATCATAAATACCATCACCGGATTCACATGATTCCACAACTCTTCT
FD580562       --> AAACCATCATAAATACCATCACCGGATTCACCTGATTCCACAACTCTTCT
FD988472       --> ...ggATCATAAATACCATCACCGGATTCACATGATTCCACAACTCTTCT
EY949439       --> ..................................................
EV567604       --> ..................................................
EW733677       --> ..................................................
EX896756       --> ..................................................
FD957750       --> ..................................................
EX765900       --> ..................................................

               51     -    101
UN19959        --> GAATCTGTCACTTTCTTTTTTCATGTATCATTGTCTTATTAATTTTTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD584328       <-- ...............TTTTTTCATGTATCATTGTCTTATTAATTTTTGAA
EW730706       <-- .....................CATGTATCATTGTCTTATTAATTTTTGAA
EW738727       <-- .....................CATGTATCAT-GTCTTATTAATTTT-GAA
EV545292       <-- ..................................................
EX900636       <-- ..................................................
EV572511       <-- ..................................................
FD984349       <-- ..................................................
EX769611       <-- ..................................................
EV549913       --> GAATCTGTCACTTTCTTTTTTCATGTATCATTGTCTTATTAATTTTTGAA
FD580562       --> GAATCTGTCACTTTCTTTTTTCATGTATCATTGTCTTATTAATTTTTGAA
FD988472       --> GAATCTGTCACTTTCTTTTTTCATGTATCATTGTCTTATTAATTTTTGAA
EY949439       --> ...............TTTTTTCATGTATCATTGTCTTATTAATTTTTGAA
EV567604       --> .....................CATGTATCATTGTCTTATTAATTTTTGAA
EW733677       --> .....................CATGTATCATTGTCTTATTAATTTTTGAA
EX896756       --> ..........................................TTTTTGAA
FD957750       --> ..................................................
EX765900       --> ..................................................

               101    -    151
UN19959        --> TTTGTTTTTATTAGAGGTGGTGGAGTATTGAAAGCTATATGTCTTGAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD584328       <-- TTTGTTTTTATTAGAGGTGGTGGAGTATTGAAAGCTATATGTCTTGAAGG
EW730706       <-- TTTGTTTTTATTAGAGGTGGTGGAGTATTGAAAGCTATATGTCTTGAACG
EW738727       <-- TTTGTTTT-A-TAGAGGTGGTGGAGTAT-GAAAGCTATATGTCTTGAAGG
EV545292       <-- ............AGAGGTGGTGGAGTATTGAAAGCTATATGTCTTGAAGG
EX900636       <-- ............AGAGGTGGTGGAGTATTGAAAGCTATATGTCTTGAAGG
EV572511       <-- ..................................................
FD984349       <-- ..................................................
EX769611       <-- ..................................................
EV549913       --> TTTGTTTTTATTAGAGGTGGTGGAGTATTGAAAGCTATATGTCTTGAAGG
FD580562       --> TTTGTTTTTATTAGAGGTGGTGGAGTATTGAAAGCTATATGTCTTGAAGG
FD988472       --> TTTGTTTTTATTAGAGGTGGTGGAGTATTGAAAGCTATATGTCTTGAAGG
EY949439       --> TTTGTTTTTATTAGAGGTGGTGGAGTATTGAAAGCTATATGTCTTGAAGG
EV567604       --> TTTGTTTTTATTAGAGGTGGTGGAGTATTGAAAGCTATATGTCTTGAAGG
EW733677       --> TTTGTTTTTATTAGAGGTGGTGGAGTATTGAAAGCTATATGTCTTGAAGG
EX896756       --> TTTGTTTTTATTAGAGGTGGTGGAGTATTGAAAGCTATATGTCTTGAAGG
FD957750       --> ..................................................
EX765900       --> ..................................................

               151    -    201
UN19959        --> GTGTATGTATTAATGCCAGAGCCAGTCTTGCTTCTTAGCTTATTGTCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD584328       <-- GTGTATGTATTAATGCCAGAGCCAGTCTTGCTTCTTAGCTTATTGTCAAG
EW730706       <-- GTGTATGTATTAATGCCAGAGCCAGTCTTGCTTCTTAGCTTATTGTCAAG
EW738727       <-- GCGTATGTATTAATGCCAGAGCCAGTCTTGCTTCTTAGCTTATTGTCAAG
EV545292       <-- GTGTATGCATTAATGCCAGAGCCAGTCTTGCTTCTTAGCTTATTGTCAAG
EX900636       <-- GTGTATGTATTAATGCCAGAGCCAGTCTTGCTTCTTAGCTTATTGTCAAG
EV572511       <-- ..................GAGCCAGTCTTGCTTCTTAGCTTATTGTCAAG
FD984349       <-- .....................................GCTTATTGTCAAG
EX769611       <-- .......................................ggATTGTCAAG
EV549913       --> GTGTATGCATTAATGCCAGAGCCAGTCTTGCTTCTTAGCTTATTGTCAAG
FD580562       --> GTGTATGTATTAATGCCAGAGCCAGTCTTGCTTCTTAGCTTATTGTCAAG
FD988472       --> GTGTATGTATTAATGCCAGAGCCAGTCTTGCTTCTTAGCTTATTGTCAAG
EY949439       --> GTGTATGTATTAATGCCAGAGCCAGTCTTGCTTCTTAGCTTATTGTCAAG
EV567604       --> GTGTATGTATTAATGCCAGAGCCAGTCTTGCTTCTTAGCTTATTGTCAAG
EW733677       --> GCGTATGTATTAATGCCAGAGCCAGTCTTGCTTCTTAGCTTATTGTCAAG
EX896756       --> GTGTATGTATTAATGCCAGAGCCAGTCTTGCTTCTTAGCTTATTGTCAAG
FD957750       --> ..................................................
EX765900       --> ..................................................

               201    -    251
UN19959        --> TTGTTTTCTTTCTTAGTTACTTGACATATAAGGAACAAACGATATGAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD584328       <-- TTGTTTTCTTTCTTAGTTACCTGACATCTAAGGAACAAACGATATGAATA  Raphanus sativus cv Rat-Tail Radish #3870
EW730706       <-- TTGTTTTCTTTCTTAGTTACATGACATCTAAGGAACAAACGATATGAATA  Raphanus sativus cv Early Scarlet Globe
EW738727       <-- TTGTTTTCTTTCTTAGTTACTTGACATATAAGGAACAAACGATATGAATA  Raphanus sativus cv Rat-Tail Radish #3870
EV545292       <-- TTGTTTTCTTTCTTAGTTACTTGACATATAAGGAACAAACGATATGAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900636       <-- TTGTTTTCTTTCTTAGTTACCTGACATCTAAGGAACAAACGATATGAATA  Raphanus sativus cv Early Scarlet Globe
EV572511       <-- TTGTTTTCTTTCTTAGTTACTTGACATATAAGGAACAAACGATATGAATA  Raphanus raphanistrum subsp. landra
FD984349       <-- TTGTTTTCTTTCTTAGTTACTTGACATATAAGGAACAAACGATATGAATA  Raphanus raphanistrum subsp. landra
EX769611       <-- TTGTTTTCTTTCTTAGTTACTTGACATATAAGGAACAAACGATATGAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549913       --> TTGTTTTCTTTCTTAGTTACTTGACATATAAGGAACAAACGATATGAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD580562       --> TTGTTTTCTTTCTTAGTTACCTGACATCTAAGGAACAAACGATATGAATA  Raphanus sativus cv Rat-Tail Radish #3870
FD988472       --> TTGTTTTCTTTCTTAGTTACTTGACATATAAGGAACAAACGATATGAATA  Raphanus raphanistrum subsp. landra
EY949439       --> TTGTTTTCTTTCTTAGTTACCTGACATCTAAGGAACAAACGATATGAATA  Raphanus sativus cv Rat-Tail Radish #3870
EV567604       --> TTGTTTTCTTTCTTAGTTACTTGACATATAAGGAACAAACGATATGAATA  Raphanus raphanistrum subsp. landra
EW733677       --> TTGTTTTCTTTCTTAGTTACTTGACATATAAGGAACAAACGATATGAATA  Raphanus sativus cv Rat-Tail Radish #3870
EX896756       --> TTGTTTTCTTTCTTAGTTACCTGACATCTAAGGAACAAACGATATGAATA  Raphanus sativus cv Early Scarlet Globe
FD957750       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX765900       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               251    -    301
UN19959        --> GTGGTTCTTGTTCGTCTTTAATGGATGTGGGTTATGATCATCATCATCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD584328       <-- GTGGTTCTTGTTCGTCTTTAATGGATGTGGGTTATGATCATCATCATC--
EW730706       <-- GTGGTTCTTGTTCGTCTTTAATGGATGTGGGTTATGATCATCATCATC--
EW738727       <-- GTGGTTCTTGTTCGTCTTTAATGGATGTGGGTTATGATCATCATCATCAT
EV545292       <-- GTGGTTCTTGTTCGTCTTTAATGGATGTGGGTTATGATCATCATCATCAT
EX900636       <-- GTGGTTCTTGTTCGTCTTTAATGGATGTGGGTTATGATCATCATCATC--
EV572511       <-- GTGGTTCTTGTTCGTCTTTAATGGATGTGGGTTATGATCATCATCATCAT
FD984349       <-- GTGGTTCTTGTTCGTCTTTAATGGATGTGGGTTATGATCATCATCATCAT
EX769611       <-- GTGGTTCTTGTTCGTCTTTAATGGATGTGGGTTATGATCATCATCATCAT
EV549913       --> GTGGTTCTTGTTCGTCTTTAATGGATGTGGGTTATGATCATCATCATCAT
FD580562       --> GTGGTTCTTGTTCGTCTTTAATGGATGTGGGTTATGATCATCATCATCAT
FD988472       --> GTGGTTCTTGTTCGTCTTTAATGGATGTGGGTTATGATCATCATCATCAT
EY949439       --> GTGGTTCTTGTTCGTCTTTAATGGATGTGGGTTATGATCATCATCATCAT
EV567604       --> GTGGTTCTTGTTCGTCTTTAATGGATGTGGGTTATGATCATCATCATCAT
EW733677       --> GTGGTTCTTGTTCGTCTTTAATGGATGTGGGTTATGATCATCATCATCAT
EX896756       --> GTGGTTCTTGTTCGTCTTTAATGGATGTGGGTTATGATCATCATCATCAT
FD957750       --> ..................................................
EX765900       --> ..................................................

               301    -    351
UN19959        --> CATCATCAT---GGTCATGAAGAGCTTCATGTTTTGGCCGTGGATGATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD584328       <-- ----ATCAT---GGTCATGAAGAGCTTCATGTTTTGGCCGTGGATGATAA  Raphanus sativus cv Rat-Tail Radish #3870
EW730706       <-- ----ATCAT---GGTCATGAAGAGCTTCATGTTTTGGCCGTGGACGATAA  Raphanus sativus cv Early Scarlet Globe
EW738727       <-- CATCATCAT---GGTCATGAAGAGCTTCATGTTTTGGCCGTGGATGATAA  Raphanus sativus cv Rat-Tail Radish #3870
EV545292       <-- CATCATCAT---GGTCATGAAGAGCTTCATGTTTTGGCCGTGGATGATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900636       <-- ----ATCAT---GGTCATGAAGAGCTTCATGTTTTGGCCGTGGATGATAA  Raphanus sativus cv Early Scarlet Globe
EV572511       <-- CATCATCAT---AGTCATGAAGGGCTTCATGTTTTGGCCGTGGATGATAA  Raphanus raphanistrum subsp. landra
FD984349       <-- CATCATCATCATGGTCATGAAGAGCTTCATGTTTTGGCCGTGGATGATAA  Raphanus raphanistrum subsp. landra
EX769611       <-- CATCATCAT---GGTCATGAAGAGCTTCATGTTTTGGCCGTGGATGATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549913       --> CATCATCAT---GGTCATGAAGAGCTTCATGTTTTGGCCGTGGATGATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD580562       --> CAT---------GGTCATGAAGAGCTTCATGTTTTGGCCGTGGATGATAA  Raphanus sativus cv Rat-Tail Radish #3870
FD988472       --> CATCATCATCATGGTCATGAAGAGCTTCATGTTTTGGCCGTGGATGATAA  Raphanus raphanistrum subsp. landra
EY949439       --> CAT---------GGTCATGAAGAGCTTCATGTTTTGGCCGTGGATGATAA  Raphanus sativus cv Rat-Tail Radish #3870
EV567604       --> CATCATCAT---AGTCATGAAGGGCTTCATGTTTTGGCCGTGGATGATAA  Raphanus raphanistrum subsp. landra
EW733677       --> CATCATCAT---GGTCATGAAGAGCTTCATGTTTTGGCCGTGGATGATAA  Raphanus sativus cv Rat-Tail Radish #3870
EX896756       --> CAT---------GGTCATGAAGAGCTTCATGTTTTGGCCGTGGATGATAA  Raphanus sativus cv Early Scarlet Globe
FD957750       --> ...............CATGAAGAGCTTCATGTTTTGGCCGTGGATGATAA  Raphanus sativus cv Rat-Tail Radish #3870
EX765900       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               351    -    401
UN19959        --> TCTTATTGACCGTAAACTCGTAGAGAAGTTGCTCAAGATCTCCTCTTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD584328       <-- TCTTATTGACCGTAAACTCGTAGAGAAGTTGCTCAAGATCTCCTCTTGCA
EW730706       <-- TCTTATTGACCGTAAACTCGTAGAGAAGTTGCTTAAGATCTCCTCTTGCA
EW738727       <-- TCTTATTGACCGTAAACTCGTAGAGAAGCTGCTCAAGATCTCCTCTTGCA
EV545292       <-- TCTTATTGACCGTAAACTCGTAGAGAAGTTGCTCAAGATCTCCTCTTGCA
EX900636       <-- TCTTATTGACCGTAAACTCGTAGAGAAGTTGCTCAAGATCTCCTCTTGCA
EV572511       <-- TCTTATTGACCGTAAACTCGTAGAGAAGTTGCTCAAGATCTCCTCTTGCA
FD984349       <-- TCTTATTGACCGTAAACTCGTAGAGAAGTTGCTCAAGATCTCCTCTTGCA
EX769611       <-- TCTTATTGACCGTAAACTCGTAGAGAAGTTGCTCAAGATCTCCTCTTGCA
EV549913       --> TCTTATTGACCGTAAACTCGTAGAGAAGTTGCTCAAGATCTCCTCTTGCA
FD580562       --> TCTTATTGACCGTAAACTCGTAGAGAAGTTGCTCAAGATCTCCTCTTGCA
FD988472       --> TCTTATTGACCGTAAACTCGTAGAGAAGTTGCTCAAGATCTCCTCTTGCA
EY949439       --> TCTCATTGACCGTAAACTCGTAGAGAAGTTGCTCAAGATCTCCTCTTGCA
EV567604       --> TCTTATTGACCGTAAACTCGTAGAGAAGTTGCTCAAGATCTCCTCTTGCA
EW733677       --> TCTTATTGACCGTAAACTCGTAGAGAAGCTGCTCAAGATCTCCTCTTGCA
EX896756       --> TCTTATTGACCGTAAACTCGTAGAGAAGTTGCTCAAGATCTCCTCTTGCA
FD957750       --> TCT-ATTGACCGTAAACTCGTAGAGAAGTTGCTCAAGATCTCCTCTTGCA
EX765900       --> ..........................................CTCTTGCA

               401    -    451
UN19959        --> AAGTTACAACAGCAGAGAATGCGATTAGAGCATTGGAGTATTTGGGTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD584328       <-- AAGTTACAACAGCAGAGAATGCGATTAGAGCATTGGAGTATTTGGGTTTG
EW730706       <-- AAGTTACAACAGCAGAGAATGCAATTAGAGCATTGGTGTATTTGGGTTTG
EW738727       <-- AAGTTACAACAGCAGAGAATGCGATTAGAGCATTGGAGTATTTGGGTTTG
EV545292       <-- AAGTTACAACAGCAGAGAATGCGATTAGAGCATTGGAGTATTTGGGTTTG
EX900636       <-- AAGTTACAACAGCAGAGAATGCGATTAGAGCATTGGAGTATTTGGGTTTG
EV572511       <-- AAGTTACAACAGCAGAGAATGCGATTAGAGCATTGGAGTATTTGGGTTTG
FD984349       <-- AAGTTACAACAGCAGAGAATGCGATTAGAGCATTGGAGTATTTGGGTTTG
EX769611       <-- AAGTTACAACAGCAGAGGATGCGATTAGAGCATTGGAGTATTTGGGTTTG
EV549913       --> AAGTTACAACAGCAGAGAATGCGATTAGAGCATTGGAGTATTTGGGTTTG
FD580562       --> AAGTTACAACAGCAGAGAATGCGATTAGAGCATTGGAGTATTTGGGTTTG
FD988472       --> AAGTTACAACAGCAGAGAATGCGATTAGAGCATTGGAGTATTTGGGTTTG
EY949439       --> AAGTTACAACAGCAGAGAATGCGATTAGAGCATTGGAGTATTTGGGTTTG
EV567604       --> AAGTTACAACAGCAGAGAATGCGATTAGAGCATTGGAGTATTTGGGTTTG
EW733677       --> AAGTTACAACAGCAGAGAATGCGATTAGAGCATTGGAGTATTTGGGTTTG
EX896756       --> AAGTTACAACAGCAGAGAATGCGATTAGAGCATTGGAGTATTTGGGTTTG
FD957750       --> AAGTTACAACAGCAGAGAATGCGATTAGAGCATTGGAGTATTTGGGTTTG
EX765900       --> AAGTTACAACAGCAGAGGATGCGATTAGAGCATTGGAGTATTTGGGTTTG

               451    -    501
UN19959        --> GGAGATCAAAATCAGCATATTGATACACTGGCCAATAATGATTTGAAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD584328       <-- GGAGATCAAAATCAGCATATTGATACACTGGCCAATAATGATTTGAAGGT
EW730706       <-- GGAGATCAAAATCAGCATATTGATACACTGGCCAATAATGATTTGAAGGT
EW738727       <-- GGAGATCAAAATCAGCATATTGATACACTGGCCAATAATGATTTGAAGGT
EV545292       <-- GGAGATCAAAATCAGCATATTGATACACTGGCCAATAATGATTTGAAGGT
EX900636       <-- GGAGATCAAAATCAGCATATTGATACACTGGCCAATAATGATTTGAAGGT
EV572511       <-- GGAGATCAAAATCAGCATATTGATACACTGGCCAATAGTGATTTGAAGGT
FD984349       <-- GGAGATCAAAATCAGCATATTGATACACTGGCCAATAATGATTTGAAGGT
EX769611       <-- GGAGATCAAAATCAGCATATTGATACACTGGCCAATAATGATTTGAAGGT
EV549913       --> GGAGATCAAAATCAGCATATTGATACACTGGCCAATAATGATTTGAAGGT
FD580562       --> GGAGATCAAAATCAGCATATTGATACACTGGCCAATAATGATTTGAAGGT
FD988472       --> GGAGATCAAAATCAGCATATTGATACACTGGCCAATAATGATTTGAAGGT
EY949439       --> GGAGATCAAAATCAGCATATTGATACACTGGCCAATAATGATTTGAAGGT
EV567604       --> GGAGATCAAAATCAGCATATTGATACACTGGCCAATAGTGATTTGAAGGT
EW733677       --> GGAGATCAAAATCAGCATATTGATACACTGGCCAATAATGATTTGAAGGT
EX896756       --> GGAGATCAAAATCAGCATATTGATACACTGGCCAATAATGATTTGAAGGT
FD957750       --> GGAGATCAAAATCAGCATATTGATACACTGGCCAATAATGATTTGAAGGT
EX765900       --> GGAGATCAAAATCAGCATATTGATACACTGGCCAATAATGATTTGAAGGT

               501    -    551
UN19959        --> TAATCTAATCATCACAGACTATTGCATGCCAGGGATGACAGGCTTCGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD584328       <-- TAATCTAATCATCACAGACTATTGCATGCCAGGGATGACAGGCTTCGAGC
EW730706       <-- TAATCTAATCATCACAGACTATTGCATGCCAGGGATGACAGGCTTCGAGC
EW738727       <-- TAATCTAATCATCACAGACTATTGCATGCCAGGGATGACAGGCTTCGAGC
EV545292       <-- TAATCTAATCATCACAGACTATTGCATGCCAGGGATGACAGGCTTCGAGC
EX900636       <-- TAATCTAATCATCACAGACTATTGCATGCCAGGGATGACAGGCTTCGAGC
EV572511       <-- TAATCTAATCATCACAGACTATTGCATGCCAGGGATGACAGGCTTCGAGC
FD984349       <-- TAATCTAATCATCACAGACTATTGCATGCCAGGGATGACAGGCTTCGAGC
EX769611       <-- TAATCTAATCATCACAGACTATTGCATGCCAGGGATGACAGGCTTCGAGC
EV549913       --> TAATCTAATCATCACAGACTATTGCATGCCAGGGATGACAGGCTTCGAGC
FD580562       --> TAATCTAATCATCACAGACTATTGCATGCCAGGGATGACAG-CTTCGAGC
FD988472       --> TAATCTAATCATCACAGACTATTGCATGCCAGGGATGACAGGCTTCGAGC
EY949439       --> TAATCTAATCATCACAGACTATTGCATGCCAGGGATGACAGGCTTCGAGC
EV567604       --> TAATCTAATCATCACAGACTATTGCATGCCAGGGATGACAGGCTTCGAGC
EW733677       --> TAATCTAATCATCACAGACTATTGCATGCCAGGGATGACAGGCTTCGAGC
EX896756       --> TAATCTAATCATCACAGACTATTGCATGCCAGGGATGACAGGCTTCGAGC
FD957750       --> TAATCTAATCATCACAGACTATTGCATGCCAGGGATGACAGGCTTCGAGC
EX765900       --> TAATCTAATCATCACAGACTATTGCATGCCAGGGATGACAGGCTTCGAGC

               551    -    601
UN19959        --> TACTAAAGAAGGTGAAG---GAGTCATCATATCTGAAAGAGGTCCCTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD584328       <-- TACTAAAGAAGGTGAAG---GAGTCATCATATCTGAAAGAGGTCCCTGTT
EW730706       <-- TACTACAGAAGGTGAAG---GAGTCATCATATCTGAAAGAGGTCCCTGTT
EW738727       <-- TACTAAAGAAGGTGAAG---GAGTCATCATATCTGAAAGAGGTCCCTGTT
EV545292       <-- TACTAAAGAAGGTGAAG---GAGTCATCATATCTGAAAGAGGTCCCTGTT
EX900636       <-- TACTAAAGAAGGTGAAGCAGGAGTCATCATATTTGAAAGAGGTCCCTGTT
EV572511       <-- TACTAAAGAAGGTGAAGCAGGAGTCATCATATCTGAAAGAGGTCCCTGTT
FD984349       <-- TATTAAAGAAGGTGAAG---GAGTCATCATATCTGAAAGAGGTCCCTGTT
EX769611       <-- TACTAAAGAAGGTGAAG---GAGTCATCATATTTGAAAGAGGTCCCTGTT
EV549913       --> TACTAAAGAAGGTGAAG---GAGTCATCATATCTGAAAGAGGTCCCTGTT
FD580562       --> TACTAAAGAAAGTGA...................................
FD988472       --> TATTAAAGAAGGTGAAG---GAGTCATCATATCTGAAAGAGGTCCCTGTT
EY949439       --> TACTAAAGAAGGTGAAG---GAGTCATCATATCTGAAAGAG-TCCCTGTT
EV567604       --> TACTAAAGAAGGTGAAGCAGGAGTCATCATATCTGAAAGAGGTCCCTGTT
EW733677       --> TACTAAAGAAGGTGAAG---GAGTCATCATATCTGAAAGAGGTCCCTGTT
EX896756       --> TACTAAAGAAGGTGAAGCAGGAGTCATCATATCTGAAAGAGGTCCCTGTT
FD957750       --> TACTAAAGAAGGTGAAG---GAGTCATCATATCTGAAAGAGGTCCCTGTT
EX765900       --> TACTAAAGAAGGTGAAG---GAGTCATCATATCTGAAAGAGGTCCCTGTT

               601    -    651
UN19959        --> GTGATAATGTCTTCAGAGAACATTCCTACTCGCATCAACAAATGTTTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD584328       <-- GTGATAATGTCTTCAGAGAACATTCCTACTCGCATCAACAAATGTTTAGC
EW730706       <-- GTGATAGTGTCTTCAGAGAACATTCCTACTCGCATCAACAAATGTTTAGC
EW738727       <-- GTGATAATGTCTTCAGAGAACATTCCTGCTCGCATCAACAAATGTTTAGC
EV545292       <-- GTGATAATGTCTTCAGAGAACATTCCTACTCGCATCAACAAATGTTTAGC
EX900636       <-- GTGATAATGTCTTCAGAGAACATTCCTACTCGCATCAACAAATGTTTAGC
EV572511       <-- GTGATAATGTCTTCAGAGAACATTCCTACTCGCATCAACAAATGTTTAGC
FD984349       <-- GTGATAATGTCTTCAGAGAACATTCCTACTCGCATCAACAAATGTTTAGC
EX769611       <-- GTGATAATGTCTTCAGAGAACATTCCTACTCGCATCAACGAATGTTTAGC
EV549913       --> GTGATAATGTCTTCAGAGAACATTCCTACTCGCATCAACAAATGTTTAGC
FD580562       --> ..................................................
FD988472       --> GTGATAATGTCTTCAGAGAACATTCCTACTCGCATCAACAAATGTTTAGC
EY949439       --> GTGATAATGTCTTCAGAGAACATTCTTACTCGCATCAACAAATGTTTAGC
EV567604       --> GTGATAATGTCTTCAGAGAACATTCCTACTCGCATCAACAAATGTTTAGC
EW733677       --> GTGATAATGTCTTCAGAGAACATTCCTGCTCGCATCAACAAATGTTTAGC
EX896756       --> GTGATAATGTCTTCAGAGAACATTCCTACTCGCATCAACAAATGTTTAGC
FD957750       --> GTGATAATGTCTTCAGAGAACATTCCTACTCGCATCAACAAATGTTTAGC
EX765900       --> GTGATAATGTCTTCAGAGAACATTCCTACTCGCATCAACGAATGTTTAGC

               651    -    701
UN19959        --> TAGTGGAGCTCAAATGTTTATGCAGAAGCCTCTGAAACTATCGGATGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD584328       <-- TAGTGGAGCTCAAATGTTTATGCAGAAGCCTCTGAAACTATCGGATGTTG
EW730706       <-- TAGTGGAGCTCAAATGTTTATGCAGAAGCCTCTGAAACTATCGGATGTTG
EW738727       <-- TAGTGGAGCTCAAATGTTTATGCAGAAGCCTCTGAAACTATCGGATGTTG
EV545292       <-- TAGTGGAGCTCAAATGTTTATGCAGAAGCCTCTGAAACTATCGGATGTTG
EX900636       <-- TAGTGGAGCTCAAATGTTTATGCAGAAGCCTCTGAAACTATCGGATGTTG
EV572511       <-- TAGTGGAGCTCAAATGTTTACGCAGAAGCCTCTGAAACTATCGGATGTTG
FD984349       <-- TAGTGGAGCTCAAATGTTTATGCAGAAGCCTCTGAAACTATCGGATGTTG
EX769611       <-- TAGTGGAGCTCAAATGTTTATGCAGAAGCCTCTGAAACTATCGGATGTTG
EV549913       --> TAGTGGAGCTCAAATGTTTATGCAGAAGCCTCTGAAACTATCGGATGTTG
FD580562       --> ..................................................
FD988472       --> TAGTGGAGCTCAAATGTTTATGCAGAAGCCTCTGAAACTATCGGATGTTG
EY949439       --> TAGTGGAGCTCAA-TGTTTATGCAGAAGCCTCTGAAACTATCGGATGTTG
EV567604       --> TAGTGGAGCTCAAATGTTTACGCAGAAGCCTCTGAAACTATCGGATG...
EW733677       --> TAGTGGAGCTCAAATGTTTATGCAGAAGCCTCTGAAACTATCGGATGTTG
EX896756       --> TAGTGGAGCTCAAATGTTTATGCAGAAGCCTCTGAAACTATCGGATGTTG
FD957750       --> TAGTGGAGCTCAAATGTTTATGCAGAAGCCTCTGAAACTATCGGATGTTG
EX765900       --> TAGTGGAGCTCAAATGTTTATGCAGAAGCCTCTGAAACTATCGGATGTTG

               701    -    751
UN19959        --> AGAAACTTAAATGCCATCTCATGAACTGTAGAAGCTGACAATTACATGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD584328       <-- AGAAACTTAAATGCCATCTCATGAACTGTAGAAGCTGACAATTACATGTA
EW730706       <-- AGAAACTTAAATGCCATCTCATGAACTGTAGAAGCTGACAATTACATGTA
EW738727       <-- AGAAACTTAAATGCCATCTCATGAACTGTAGAAGCTGACAATTACATGTA
EV545292       <-- AGAAACTTAAATGCCATCTCATGAACTGTAGAAGCTGACAATTACATGTA
EX900636       <-- AGAAACTTAAATGCCATCTCATGAACTGTAGAAGCTGACAATTACATGTA
EV572511       <-- AGAAACTTAAATGCCATCTCATGAACTGTAGAAGCTGACAATTACATGTA
FD984349       <-- AGAAACTTAAATGCCATCTCATGAACTGTAGAAGCTGACAATTACATGTA
EX769611       <-- AGAAACTTAAATGCCATCTCATGAACTGTAGAAGCTGACAATTACATGTA
EV549913       --> AGAAACTTAAATGCCATCTCATGAACTGTAGAAGCTGACA-TTACATGTA
FD580562       --> ..................................................
FD988472       --> AGAAACTTAAATGCCATCTCATGAACTGTAGAAGCTGACAATTACATGTA
EY949439       --> AGAAACTTAAATGCCATCTCATGAACTGTAGAAGCTG.............
EV567604       --> ..................................................
EW733677       --> AGAAACTTAAATGCCATCTCATGAACTGTAGAAGCTGACAATTACATGTA
EX896756       --> AGAAACTTAAATGCCATCTCATGAACTGTAGAAGCTGACAATTACATGTA
FD957750       --> AGAAACTTAAATGCCATCTCATGAACTGTAGAAGCTGACAATTACATGTA
EX765900       --> AGAAACTTAAATGCCATCTCATGAACTGTAGAAGCTGACAATTACATGTA

               751    -    801
UN19959        --> GCCCTAACCATAAAATATTTCCTTATCTTGGTTCCTTATTTGATTGTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD584328       <-- GCCCTAACCATAAAATATTTCCTTATCTTGGTTCCTTATTTGATTGTGTT
EW730706       <-- GCCCTAACCAT.......................................
EW738727       <-- GCCCTAACCATAAAATATTTCCTTATCTTGGTTCCTTATTTGATTGTGTT
EV545292       <-- GCCCTAACCATAAAATATTTCCTTATCTTGGTTCCTTATTTGATTGTGTT
EX900636       <-- GCCCTAACCATAAAATATTTCCTTATCTTGGTTCCTTATTTGATTGTGTT
EV572511       <-- GCCCTAACCATAAAATATTTCCTTATCTTGGTTCCTTATTTGATTGTGTT
FD984349       <-- GCCCTAACCATAAAATATTTCCGTATCTTGGTTCCTTATTTGATTGTGTT
EX769611       <-- GCCCTAACCATAAAATATTTCCTTATCTTGGTTCCTTATTTGATTGTGTT
EV549913       --> GCCCTAACCATAAA-TATTTCCTTATCTgg....................
FD580562       --> ..................................................
FD988472       --> GCCCTAACCATAAAATATTTCCGTATCTTG....................
EY949439       --> ..................................................
EV567604       --> ..................................................
EW733677       --> GCCCTAACCATAAA-TATTTCCTTATCTTGGTTCCTTATTTGAT-GTG-T
EX896756       --> GCCCTAACCATAAAATATTTCCTTATCTTGGTTCCTTATTTGATTGTGTT
FD957750       --> GCCCTAACCATAAAATATTTCCTTATCTTGGTTCCTTATTTGATTGTGTT
EX765900       --> GCCCTAACCATAAAATATTTCCTTATCTTGGTTCCTTATTTGATTGTGTT

               801    -    851
UN19959        --> ACACGTTTTTTGTGTCTTCTGAAAATCAAGTCATGTTTTCAAAATAGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD584328       <-- ACACGTT...........................................
EW730706       <-- ..................................................
EW738727       <-- ACACGTTTTTTGTGTCTTCTGAAAATCAAGTCATGTTTTCAGAATAGCAA
EV545292       <-- ACACGTTTTTTGTGTCTTCTGAAAATCAAGTCATGTTTTCAAAATAGCAA
EX900636       <-- ACACGTTTTTTGTGTCTTCTGAAAATCAAGTCATGTTTTCAAAATAGCAA
EV572511       <-- ACACGTTTTTTGTGTCTTCTGAAAATCAAGTCATGTTTTCAAAATAGCAA
FD984349       <-- ACACGTTTTTTGTGTCTTCTGAAAATCAAGTCATGTTTTCGAAATAGCAA
EX769611       <-- ACACGTTTTTTGTGTCTTTTGAAAATCAAGTCATGTTTTCAAAATAGCAA
EV549913       --> ..................................................
FD580562       --> ..................................................
FD988472       --> ..................................................
EY949439       --> ..................................................
EV567604       --> ..................................................
EW733677       --> ACACGTTTTT-GTGTCTTCTGAAA-TCAAGTCATGTTT-C-AGATAGC-A
EX896756       --> ACACGTTTTTTGTGT...................................
FD957750       --> ACACGTTTTTTGTGTCTTCTGAAAATCAAGTCATGTTTTCAAAATAGCAA
EX765900       --> ACACGTTTTTTGTGTCTTCTGAAAATCAAGTCATGTTTTCAAAATAGCAA

               851    -    901
UN19959        --> ATCTTAAGCTACACACACAAAAAGAAATGTAAGGAATATATAAAATGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD584328       <-- ..................................................
EW730706       <-- ..................................................
EW738727       <-- ATCTTAAGCTACACACACAAAAAGAAATGTAAGGAATATATAAAATGATT
EV545292       <-- ATCTTAAGCTACACACACAAAAAGAAATGTAAGGAATATATAAAATGATT
EX900636       <-- ATCTTAAGCTACACACACAAAAAGAAATGTAAGGAATATATAAAATGATT
EV572511       <-- ATCTTAAGCTACACACACAAAAAGAAATGTAAGGAATATATAAAATGATT
FD984349       <-- ATCTTAAGCTACACACACAAAAAGAAATGTAAGGAATATATAAAATGATT
EX769611       <-- ATCTTAAGCTACACACACAAAAAGAAATGTAAGGAATATATAAAATGATT
EV549913       --> ..................................................
FD580562       --> ..................................................
FD988472       --> ..................................................
EY949439       --> ..................................................
EV567604       --> ..................................................
EW733677       --> ATCTT-AGCTA-ACACACA...............................
EX896756       --> ..................................................
FD957750       --> ATCTTAAGCTACACACACAAAAAGAAATGTAAGGAATATATAAAATGATT
EX765900       --> ATCTTAAGCTACACACACAAAA-GAAATGTAAG-AATATATAAAATGATT

               901    -    951
UN19959        --> ATGGTTCTGAAG
                   ~~~~~~~~~~~~
FD584328       <-- ............
EW730706       <-- ............
EW738727       <-- ATGGTTCTGAAG
EV545292       <-- ATGGTTCTG...
EX900636       <-- ATGGTTCTG...
EV572511       <-- ATGGTTC.....
FD984349       <-- ATGGTTCTG...
EX769611       <-- ATGGTTCTG...
EV549913       --> ............
FD580562       --> ............
FD988472       --> ............
EY949439       --> ............
EV567604       --> ............
EW733677       --> ............
EX896756       --> ............
FD957750       --> ATGGTTCT....
EX765900       --> ATGGTTCTG...