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Alignment for radish unigene UN19960

               1      -     51
UN19960        --> GGGGGAAAAAAACACAAAAGGATTTCTTAGGGTTTGTTTGATTGATCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- ..................................................
FD967113       <-- ..................................................
EW717407       --> GGGGGAAAAAAACACAAAAGGATTTCTTAGGGTTTGTTTGATTGATCCAA
EX903555       --> ..GGGAAAAAAACACAAAAGGATTTCTTAGGGTTTGTTTGATTGATCCAA
EY900305       --> ...........ggACAAAAGGTTTTCTTAGGGTTTGTTTGATTGATCCAA
FD559579       --> ...........ggACAAAAGGTTTTCTTAGGGTTTGTTTGATTGATCCAA
FD946581       --> ....................GATTTCTTAGGGTTTGTTTGATTGATCCAA
FD578490       --> .........................CTTAGGGTTTGTTTGATTGATCCAA
FD937700       --> .....................................ggGATTGATCCAA
FD572034       --> ..................................................
FD988852       --> ..................................................
FD970854       --> ..................................................
FD972146       --> ..................................................

               51     -    101
UN19960        --> GCGGAAGAGAAAATCGAAAGAGAGAGAAGGCATGGAAGAAGCGTTGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- ..................................................
FD967113       <-- ..................................................
EW717407       --> GCGGAAGAGAAAATCGAAAGAGAGAGAAGGCATGGAAGAAGCGTTGATGA
EX903555       --> GCGGAAGAGAAAATCGAAAGAGAGAGAAGGCATGGAAGAAGCGTTGATGA
EY900305       --> GCGGAAGAGAAAATCGAAAGAGAGAGAAGGCATGGAAGAAGCGTTGATGA
FD559579       --> GCGGAAGAGAAAATCGAAAGAGAGAGAAGGCATGGAAGAAGCGTTGATGA
FD946581       --> GCGGAAGAGAAAATCGAAAGAGAGAGAAGGCATGGAAGAAGCGTTGATGA
FD578490       --> GCGGAAGAGAAAATCGAAAGAGAGAGAAGGCATGGAAGAATCGTTGATGA
FD937700       --> GCGGAAGAGAAAATCGAAAGAGAGAGAAGGCATGGAAGAAGCGTTGATGA
FD572034       --> .gggatccaagcggaagagaaaatcGAAGCCATGGAAGAAGCGTTGATGA
FD988852       --> ..........................................GTTGATGA
FD970854       --> ..................................................
FD972146       --> ..................................................

               101    -    151
UN19960        --> GCGCCTCAACAATCGCAGACCAGCGTCAGAAGATCGAACAGTACAAACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- ..................................................
FD967113       <-- ..................................................
EW717407       --> GCGCCTCAACAATCGCAGACCAGCGTCAGAAGATCGAACAGTACAAACTC
EX903555       --> GCGCCTCAACAATCGCAGACCAGCGTCAGAAGATCGAACAGTACAAACTC
EY900305       --> GCGCCTCAACAATCGCAGACCAGCGTCAGAAGATCGAACAGTACAAACTC
FD559579       --> GCGCCACAACAATCGCAGACCAGCGTCAGAAGATCGAACAGTACAAACTC
FD946581       --> GCGCCTCAACAATCGCAGACCAGCGTCAGAAGATCGAACAGTACAAACTC
FD578490       --> GCGCCTCAACAATCGCAGACCAGCGTCAGAAGATCGAACAGTACAAACTC
FD937700       --> GCGCCTCAACAATCGCATACCAGCGTCAGAAGATCGAACAGTACAAACTC
FD572034       --> GCGCCTCAACAATCGCAGACCAGCGTCAGAAGATCGAACAGTACAAACTC
FD988852       --> GCGCCTCAACAATCGCAGACCAGCGTCAGAAGATCGAACAGTACAAACTC
FD970854       --> ..................................................
FD972146       --> ..................................................

               151    -    201
UN19960        --> ATCCTCTCATCTGTTCTCTCCTCCAACGATCTTCTCCAATCCAAACACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- ..................................................
FD967113       <-- ..................................................
EW717407       --> ATCCTCTCATCTGTTCTCTCCTCCAACGATCTTCTCCAATCCAAACACTT
EX903555       --> ATCCTCTCATCTGTTCTCTCCTCCAACGATCTTCTCCAATCCAAACACTT
EY900305       --> ATCCTCTCATCTGTTCTCTCCTCCAACGACCTTCTCCAATCCAAACACTT
FD559579       --> ATCCTCTCATCTGTTCTCTCCTCCAACGACCTTCTCCAATCCAAACACTT
FD946581       --> ATCCTCTCATCTGTTCTCTCCTCCAACGATCTTCTCCAATCCAAACACTT
FD578490       --> ATCCTCTCATCTGTTCTCTCCTCCAACGATCTTCTCCAATCCAAACACTT
FD937700       --> ATCCTCTCATCTGTTCTCTCCTCCAACGATCTTCTCCAATCCAAACACTT
FD572034       --> ATCCTCTCATCTGTTCTCTCCTCCAACGATCTTCTCCAATCCGAACACTT
FD988852       --> ATCCTCTCATCTGTTCTCTCCTCCAACGATCTTCTCCAATCCAAACACTT
FD970854       --> ..................................................
FD972146       --> ..................................................

               201    -    251
UN19960        --> CATCGATCACATTCTGTCGGATGATGTGCCGTTGGTAGTTTCGAGGCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967113       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717407       --> CATCGATCACATTCTGTCGGATGATGTGCCGTTGGTAGTTTCGAGGCAGC  Raphanus sativus var. oleiformis
EX903555       --> CATCGATCACATTCTGTCGGATGATGTGCCGTTGGTAGTTTCGAGGCAGC  Raphanus sativus cv Rat-Tail Radish #3870
EY900305       --> CATCGATCACATTCTGTCGGATGATGTGCCGTTGGTAGTTTCGAGGCAGC  Raphanus raphanistrum subsp. maritimus
FD559579       --> CATCGATCACATTCTGTCGGATGATGTGCCGTTGGTAGTTTCGAGGCAGC  Raphanus raphanistrum subsp. landra
FD946581       --> CATCGATCACATTCTGTCGGATGATGTGCCGTTGGTAGTTTCGAGGCAGC  Raphanus sativus cv Early Scarlet Globe
FD578490       --> CATCGATCACATTCTGTCGGATGATGTGCCGTTGGTAGTTTCGAGGCAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD937700       --> CATCGATCACATTCTGTCGGATGATGTGCCGTTGGTAGTTTCGAGGCAGC  Raphanus sativus var. oleiformis
FD572034       --> CATCGATCACATTCTGTCGGATGATGTGGCGTTGGTGGTTTCGAGGCAGC  Raphanus sativus cv Early Scarlet Globe
FD988852       --> CATCGATCACATTCTGTCGGATGATGTGGCGTTGGTGGTTTCGAGGCAGC  Raphanus raphanistrum subsp. landra
FD970854       --> ......gCACATTCTGTCGGATGATGTGCCGTTGGTGGTTTCGAGGCAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972146       --> ......gCACATTCTGTCGGATGATGTGCCGTTGGTGGTTTCGAGGCAGC  Raphanus raphanistrum subsp. raphanistrum (MS)

               251    -    301
UN19960        --> TTTTGCAGTCTTTCGCACAAGAGGTCGGGAGGCTGGAACCAGAGACCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- ..................................................
FD967113       <-- ..................................................
EW717407       --> TTTTGCAGTCTTTCGCACAAGAGGTCGGGAGGCTGGAACCAGAGACCCAG
EX903555       --> TTTTGCAGCCTTTCGCACAAGAGGTCGGGAGGCTGGAACCAGAGACCCAG
EY900305       --> TTTTGCAGTCTTTCGCACAAGAGGTCGGGAGGCTGGAACCAGAGACCCAG
FD559579       --> TTTTGCAGTCTT-CGCACAAGAGGTCGGGAGGCTGGAACCAGAGACCCAG
FD946581       --> TTTTGCAGTCTTTCGCACAAGAGGTCGGGAGGCTGGAACCAGAGACCCAG
FD578490       --> TTTTGCAGTCTTTCGCACAAGAGGTCGGGAGGCTGGAACCAGAGACCCAG
FD937700       --> TTTTGCAGTCTTTCGCACAAGAGGTCGGGAGGCTGGAACCAGAGACCCAG
FD572034       --> TTTTGCAGTCTTTCGCACAAGAGGTCGGGAGGCTGGAACCAGAGACCCAG
FD988852       --> TTTTGCAGTCTTTCGCACAAGAGGTCGGGAGGCTGGAACCAGAGACCCAG
FD970854       --> TTTTGCAGTCATTCGCACAAGAGGTCGGGAGACTGGAACCAGAGACCCAG
FD972146       --> TTTTGCAGTCATTCGCACAAGAGGTCGGGAGACTGGAACCAGAGACCCAG

               301    -    351
UN19960        --> AAGGAGATTGCTCTCTTCACACTCACCCAGATTCAGCCCAGAGTTGTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- ..................................................
FD967113       <-- ..................................................
EW717407       --> AAGGAGATTGCTCTCTTCACACTCACCCAGATTCAGCCCAGAGTTGTCTC
EX903555       --> AAGGAGATTGCTCTCTTCACACTCACCCAGATTCAGCCCAGAGTTGTCTC
EY900305       --> AAGGAGATTGCTCTCTTCACACTCACCCAGATTCAGCCCAGAGTTGTCTC
FD559579       --> AAGGAGATTGCTCTCTTCACACTCACCCAGATTCAGCCCAGAGTTGTCTC
FD946581       --> AAGGAGGTTGCTCTCTTCACACTCACCCAGATTCAGCCCAGAGTTGTCTC
FD578490       --> AAGGAGATTGCTCTCTTCACACTCACCCAGATTCAGCCCAGAGTTGTCTC
FD937700       --> AAGGAGATTGCTCTCTTCACACTCACCCAGATTCAGCCCAGAGTTGTCTC
FD572034       --> AAGTAGATTGCTCTCTTCACACTCACCCAGATTCAGCCCAGAGTTGTCTC
FD988852       --> AAGGAGATTGCTCTCTTCACACTCACCCAGATTCAGCCCAGAGTTGTCTC
FD970854       --> AAGGAGATTGCTCTCTTCACACTCACCCAGATTCAGCCCAGAGTTGTCTC
FD972146       --> AAGGAGATTGCTCTCTTCACACTCACCCAGATTCAGCCCAGAGTTGTCTC

               351    -    401
UN19960        --> TTTCGAGGAACAGGCACTTGTTATTAGAGAAAAGCTTGCGGCTTTGTATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- ..................................................
FD967113       <-- ..................................................
EW717407       --> TTTCGAGGAACAGGCACTTGTTATTAGAGAAAAGCTTGCGGCTTTGTACG
EX903555       --> TTTCGAGGAACAGGCACTTGTTATTAGAGAAAAGCTTGCGGCTTTGTATG
EY900305       --> TTTCGAGGAACAGGCACTTGTTATTAGAGAAAAGCTTGCGGCTTTGTATG
FD559579       --> TTTCGAGGAACAGGCACTTGTTATTAGAGAAAAGCTTGCGGCTTTGTATG
FD946581       --> TTTCGAGGAACAGGCACTTGTTATTAGAGAAAAGCTTGCGGCTTTGTATG
FD578490       --> TTTCGAGGAACAGGCACTTGTTATTAGAGAAAAGCTTGCGGCTTTGTATG
FD937700       --> TTTCGAGGAACAGGCACTTGTTATTAGAGAAAAGCTTGCGGCTTTGTATG
FD572034       --> TTTCGAGGAACAGGCACTTGTTATTAGAGAAAAGCTTGCGGCTTTGTATG
FD988852       --> TTTCGAGGAACAGGCACTTGTTATTAGAGAAAAGCTTGCGGCTTTGCATG
FD970854       --> TTTCGAGGAACAGGCACTTGTTATTAGAGAAAAGCTTGCGGCTTTGTATG
FD972146       --> TTTCGAGGAACAGGCACTTGTTATTAGAGAAAAGCTTGCGGCTTTGTATG

               401    -    451
UN19960        --> AATCAGAGCAGGAATGGTCTAGAGCTGCCCAGATGTTGAGTGGCATTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- ..................................................
FD967113       <-- ..................................................
EW717407       --> AATCAGAGCAGGAATGGTCTAGAGCTGCCCAGATGTTGAGTGGCATTGAT
EX903555       --> AATCAGAGCAGGAATGGTCTAGAGCTGCCCAGATGTTGAGTGGCATTGAT
EY900305       --> AATCAGAGCAGGAATGGTCTAGAGCTGCCCAGATGTTGAGTGGCATTGAT
FD559579       --> AATCAGAGCAGGAATGGTCTAGAGCTGCCCAGATGTTGAGTGGCATTGAT
FD946581       --> AATCAGAGCAGGAATGGTCTAGAGCTGCCCAGATGTTGAGTGGCATTGAT
FD578490       --> AATCAGAGCAGGAATGGTCTAGAGCTGCCCAGATGTTGAGTGGCATTGAT
FD937700       --> AATCAGAGCAGGAATGGTCTAGAGCTGCCCAGATGTTGAGTGGCATTGAT
FD572034       --> AATCAGAGCAGGGATGGTCTAGAGCTGCCCAGATGTTGAGTGGCATTGAT
FD988852       --> AATCAGAGCAGGAATGGTCAAGAGCTGCCCAGATGTTGAGTGGCATTGAT
FD970854       --> AATCAGAGCAGGAATGGTCTAGAGCTGCCCAGATGTTGAGTGGCATTGAT
FD972146       --> AATCAGAGCAGGAATGGTCTAGAGCTGCCCAGATGTTGAGTGGCATTGAT

               451    -    501
UN19960        --> CTTGACTCTGGAATGAGGGCTGTTGACGAAAACTTCAAGCTCTCAAAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- ..................................................
FD967113       <-- ..................................................
EW717407       --> CTTGACTCTGGAATGAGGGCTGTTGACGAAAACTTCAAGCTCTCAAAGTG
EX903555       --> CTTGACTCTGGAATGAGGGCTGTTGACGAAAACTTCAAGCTCTCAAAGTG
EY900305       --> CTTGACTCTGGAATGAGGGCTGTTGACGAAAACTTCAAGCTCTCAAAGTG
FD559579       --> CTTGACTCTGGAATGAGGGCTGTTGACGAAAACTTCAAGCTCTCAAAGTG
FD946581       --> CTTGACTCTGGAATGAGGGCTGTTGACGAAAACTTCAAGCTCTCAAAGTG
FD578490       --> CTTGACTCTGGAATGAGGGCTGTTGACGAAAACTTCAAGCTCTCAAAGTG
FD937700       --> CTTGACTCTGGAATGAGGGCTGTTGACGAAAACTTCAAGCTCTCAAAGTG
FD572034       --> CTTGACTCTGGAATGAGGGCTGTTGACGAAAACTTCAAGCTCTCAAAGTG
FD988852       --> CTTGACTCTGGAATGAGGGCTGTTGACGAAAACTTCAAGCTCTCAAAGTG
FD970854       --> CTTGACTCTGGAATGAGGGCTGTTGACGAAAACTTCAAGCTCTCCAAGTG
FD972146       --> CTTGACTCTGGAATGAGGGCTGTTGACGAAAACTTCAAGCTCTCCAAGTG

               501    -    551
UN19960        --> TATCCAAATTGCTCGTTTGTATCTCGAGGATGATGATGCTGTAAATGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- ..................................................
FD967113       <-- ..................................................
EW717407       --> TATCCAAATTGCTCGTTTGTATCTCGAGGATGATGATGCTGTAAATGCAG
EX903555       --> TATCCAAATTGCTCGTTTGTATCTCGAGGATGATGATGCTGTAAATGCAG
EY900305       --> TATCCAAATTGCTCGTTTGTATCTCGAGGATGATGATGCTGTAAATGCAG
FD559579       --> TATCCAAATTGCTCGTTTGTATCTCGAGGATGATGATGCTGTAAATGCAG
FD946581       --> TATCCAAATTGCTCGTTTGTATCTCGAGGATGATGATGCTGTAAATGCAG
FD578490       --> TATCCAAATTGCTCGTTTGTATCTCGAGGATGATGATGCTGTAAATGCAG
FD937700       --> TATCCAAATTGCTCGTTTGTATCTCGAGGATGATGATGCTGTAAATGCAG
FD572034       --> TATCCAAATTGCTCGTTTGTATCTCGAGGATGATGATGCTGTAAATGCAG
FD988852       --> TATCCAAATTGCTCGTTTGTATCTCGAGGATGATGATGCTGTAAATGCAG
FD970854       --> TATCCAAATTGCTCGTTTGTATCTCGAGGATGATGATGCTGTAAATGCAG
FD972146       --> TATCCAAATTGCTCGTTTGTATCTCGAGGATGATGATGCTGTAAATGCAG

               551    -    601
UN19960        --> AGACCTATATAAATAAAGCTTCTTTCTTAGTGAACAGCAGTCAGAATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- ..................................................
FD967113       <-- ..................................................
EW717407       --> AGACCTATATAAATAAAGCTTCTTTCTTGGTG..................
EX903555       --> AGACTTATATAAATAAAGCTTCTTTCTTAGTGAACAGCAGTCAGAATGAA
EY900305       --> AGACTTATATAAATAAAGCTTCTTTCTTAGTGAACAGCAGTCAGAATGAA
FD559579       --> AGACTTATATAAATAAAGCTTCTTTCTTAGTGAACAGCAGTCAGAATGAA
FD946581       --> AGACCTATATAAATAAAGCTTCTTTCTTGGTGAACAGCAGTCAGAATGAA
FD578490       --> AGACTTATATAAATAAAGCTTCTTTCTTAGTGAACAGCAGTCAGAATGAA
FD937700       --> AGACCTATATAAATAAAGCTTCTTTCTTGGTGAACAGCAGTCAGAATGAA
FD572034       --> AGACGTGTATAAATAAAGCTTCTTTCTTAGTGAACAGCAGTCAGAATGAA
FD988852       --> AGACGTATATAGATAAAGCTTCTTTCTTAGTGAACAGCAGTCAGAATGAA
FD970854       --> AGACCTATATAAATAAAGCTTCTTTCTTAGTGAACAG---TCAGAATGAA
FD972146       --> AGACCTATATAAATAAAGCTTCTTTCTTAGTGAACAG---TCAGAATGAA

               601    -    651
UN19960        --> GTTTTAAATTTGCAGTACAAGGTCTGCCATGCTAGAATTCTGGACATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- ..................................................
FD967113       <-- ..................................................
EW717407       --> ..................................................
EX903555       --> GTTTTAAATTTGCAGTACAAGGTCTGCCATGCTAGAATTCTGGACATGAA
EY900305       --> GTTTTAAATTTGCAGTAC................................
FD559579       --> GTTTTAAATTTGCAGTACAAGGTCTGCCATGCTAGAATTCTGGACATGAA
FD946581       --> GTTTTAAATTTGCAGTACAAGGTCTGCCATGCTAGAATTCTGGACATGAA
FD578490       --> GTTTTAAATTTGCAGTACAAGGTCTGCCATGCTAGAATTCTGGACATGAA
FD937700       --> GTTTTAAATTTGCAGTACAAGGTCTGCCATGCTAGAATTCTGGACATGAA
FD572034       --> GTTTTAAATTTGCAGTACAAGGTCTGCCATGCTAGAATTCTGGACATGAA
FD988852       --> GTTTTAAATTTGCAGTACAAGGTCTGCCATGCTAGAATTCTGGACATGAA
FD970854       --> GTTTTAAATTTGCAGTACAAGGTCTGCCATGCTAGAATTCTGGACATGAA
FD972146       --> GTTTTAAATTTGCAGTACAAGGTCTGCCATGCTAGAATTCTGGACATGAA

               651    -    701
UN19960        --> AAGAAAGTTCTTAGACGCTGCACTTCGGTATTACAGCATATCTCAGATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- .........CTTAGACGCTGCACTTCGGTATTACAGCATATCTCAGATTG
FD967113       <-- ..................................................
EW717407       --> ..................................................
EX903555       --> AAGAAAGTTCTTAGACGCTGCACTTCGGTATTACAGCATATCTCAGATTG
EY900305       --> ..................................................
FD559579       --> AAGAAAGTTCTTAGACGCTGCACTTCGGTATTACAGCATATCTCAGATTG
FD946581       --> AAGAAAGTTCTTAGACGCTGCACTTCGGTATTACAGCATATCTCAGATTG
FD578490       --> AAGAAAGTTCTTAGACGCTGCACTTCGGTATTACAGCATATCTCAGATTG
FD937700       --> AAGAAAGTTCTTAGACGCTGCACTTCGGTATTACAGCATATCTCAGATTG
FD572034       --> AAGAAAGTTCTTAGACGCTGCACTTCGGTATTACAGCATATCTCAGATTG
FD988852       --> AAGAAAGTTCTTAGACGCTGCACTTCGGTATTACAGCATATCTCAGATTG
FD970854       --> AAGAAAGTTCTTAGACGCTGCACTTCGGTATTACAGCATATCTCAGATTG
FD972146       --> AAGAAAGTTCTTAGACGCTGCACTTCGGTATTACAGCATATCTCAGATTG

               701    -    751
UN19960        --> AAAA-CG-CCAAATAGGGGATGAAGAGATTGATGAGAATGCACTAGAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- AAAAACGCCCAAATAGGGGATGAAGAGATTGATGAGAATGCACTAGAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967113       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW717407       --> ..................................................  Raphanus sativus var. oleiformis
EX903555       --> AAAA-CG-CCAAATAGGG-ATGAAGAGATTGATGAGA-TGCACTAGAGCA  Raphanus sativus cv Rat-Tail Radish #3870
EY900305       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD559579       --> AAAA..............................................  Raphanus raphanistrum subsp. landra
FD946581       --> AAAA-CG...........................................  Raphanus sativus cv Early Scarlet Globe
FD578490       --> AAAA..............................................  Raphanus sativus cv Rat-Tail Radish #3870
FD937700       --> AAAAACG-CCAAATAGGGGATGAAGAGATTGATGAGAATGCACTA.....  Raphanus sativus var. oleiformis
FD572034       --> AAAA-CG-CCAAATAGGG-ATGAAGAGATTGATGAGAATGCACTAGAGCA  Raphanus sativus cv Early Scarlet Globe
FD988852       --> AAAA-C............................................  Raphanus raphanistrum subsp. landra
FD970854       --> AAAAACG-CCAAATAGGGGATGAAGAGATTGATGAGAATGCACTAGAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972146       --> AAAAACG-CCAAATAGGGGATGAAGAGATTGATGAGAATGCACTAGAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)

               751    -    801
UN19960        --> GGCCCTATCTGCTGCTGTCACATGTACCATATTAGCTGGAGCTGGTCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- GGCCCTATCTGCTGCTGTCACATGTACCATATTAGCTGGAGCTGGTCCTC
FD967113       <-- ..................................................
EW717407       --> ..................................................
EX903555       --> G--CCTATCTGCTGCTGTCACATGTAC-ATATTAGCTGGAGCTGGTCCTC
EY900305       --> ..................................................
FD559579       --> ..................................................
FD946581       --> ..................................................
FD578490       --> ..................................................
FD937700       --> ..................................................
FD572034       --> G-CCCTATCTGCTGCTGTGACATGT.........................
FD988852       --> ..................................................
FD970854       --> GGCCCTATCTGCTGCTGTCACATGTACCATATTAGCTGGAGCTGGTCCTC
FD972146       --> GGCCCTATCTGCTGCTGTCACATGTACCATATTAGCTGGAGCTGGTCCTC

               801    -    851
UN19960        --> AGCGTTCTCGTGTTCTTGCAACTTTATATAAAGATGAGCGCTGCTCCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- AGCGTTCTCGTGTTCTTGCAACTTTATATAAAGATGAGCGCTGCTCCAAG
FD967113       <-- ......CTCGTGTTCTTGCAACTTTATATAAAGATGAGCGCTGCTCCAAG
EW717407       --> ..................................................
EX903555       --> AGCGTTCTC.........................................
EY900305       --> ..................................................
FD559579       --> ..................................................
FD946581       --> ..................................................
FD578490       --> ..................................................
FD937700       --> ..................................................
FD572034       --> ..................................................
FD988852       --> ..................................................
FD970854       --> AGCGTTCTCGTGTTCTTGCAACTTTATATAAAGATGAGCGCTGCTCCAAG
FD972146       --> AGCGTTCTCGTGTTCTTGCAACTTTATATAAAGATGAGCGCTGCTCCAAG

               851    -    901
UN19960        --> CTTAAGATCTATCCCATCCTGCAGAAGGTTTATCTGGAAAGGATTTTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- CTTAAGATCTATCCCATCCTGCAGAAGGTTTATCTGGAAAGGATTTTAAG
FD967113       <-- CTTAAGATCTATCCCATCCTGCAGAAGGTTTATCTGGAAAGGATTTTAAG
EW717407       --> ..................................................
EX903555       --> ..................................................
EY900305       --> ..................................................
FD559579       --> ..................................................
FD946581       --> ..................................................
FD578490       --> ..................................................
FD937700       --> ..................................................
FD572034       --> ..................................................
FD988852       --> ..................................................
FD970854       --> CTTAAGATCTATCCCATCCTGCAGAAG-TTTATCTGGAAAGGATTTTAAG
FD972146       --> CTTAAGATCTATCCCATCCTGCAGAAAGTTTATCTGGAA...........

               901    -    951
UN19960        --> GAAACCAGAGATTGATGCTTTTGCGGAAGAATTAAGGCCACATCAGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- GAAACCAGAGATTGATGCTTTTGCGGAAGAATTAAGGCCACATCAGAAAG
FD967113       <-- GAAACCAGAGATTGATGCTTTTGCGGAAGAATTAAGGCCACATCAGAAAG
EW717407       --> ..................................................
EX903555       --> ..................................................
EY900305       --> ..................................................
FD559579       --> ..................................................
FD946581       --> ..................................................
FD578490       --> ..................................................
FD937700       --> ..................................................
FD572034       --> ..................................................
FD988852       --> ..................................................
FD970854       --> -AAACCAGAGATTGATGCTTTTGCGGAAGAATTAAG-CCACATCAGAAAG
FD972146       --> ..................................................

               951    -   1001
UN19960        --> CAACTTTGCCTGACAAATCCACTGTTCTTGACCGTGCCATGATTGAGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- CAACTTTGCCTGACAAATCCACTGTTCTTGACCGTGCCATGATTGAGCAT
FD967113       <-- CAACTTTGCCTGACAAATCCACTGTTCTTGACCGTGCCATGATTGAGCAT
EW717407       --> ..................................................
EX903555       --> ..................................................
EY900305       --> ..................................................
FD559579       --> ..................................................
FD946581       --> ..................................................
FD578490       --> ..................................................
FD937700       --> ..................................................
FD572034       --> ..................................................
FD988852       --> ..................................................
FD970854       --> CAACTTTGCCTGACAAATCCACTGTTCTTGAC-GTGCCATGATTGAGCAT
FD972146       --> ..................................................

               1001   -   1051
UN19960        --> AACCTTCTGAGTGCAAGCAAACTTTACACTAACATAAGGTTTGATGAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- AACCTTCTGAGTGCAAGCAAACTTTACACTAACATAAGGTTTGATGAGTT
FD967113       <-- AACCTTCTGAGTGCAAGCAAACTTTACACTAACATAAGGTTTGATGAGTT
EW717407       --> ..................................................
EX903555       --> ..................................................
EY900305       --> ..................................................
FD559579       --> ..................................................
FD946581       --> ..................................................
FD578490       --> ..................................................
FD937700       --> ..................................................
FD572034       --> ..................................................
FD988852       --> ..................................................
FD970854       --> AACCTTCTGAG.......................................
FD972146       --> ..................................................

               1051   -   1101
UN19960        --> GGGAACTCTACTGGGAATTGACCCAACTAAGGCGGAGAAGATAGCATTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- GGGAACTCTACTGGGAATTGACCCAACTAAGGCGGAGAAGATAGCATTTA
FD967113       <-- GGGAACTCTACTGGGAATTGACCCAACTAAGGCGGAGAAGATAGCATCTA
EW717407       --> ..................................................
EX903555       --> ..................................................
EY900305       --> ..................................................
FD559579       --> ..................................................
FD946581       --> ..................................................
FD578490       --> ..................................................
FD937700       --> ..................................................
FD572034       --> ..................................................
FD988852       --> ..................................................
FD970854       --> ..................................................
FD972146       --> ..................................................

               1101   -   1151
UN19960        --> ATATGATTGGCCAAGACAGAATGAGAGGTTCCATCGATCGGGAAGAGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- ATATGATTGGCCAAGACAGAATGAGAGGTTCCATCGATCGGGAAGAGGCT
FD967113       <-- ATATGATTGGCCAAGACAGAATGAGAGGTTCCATCGATCGGGAAGAGGCT
EW717407       --> ..................................................
EX903555       --> ..................................................
EY900305       --> ..................................................
FD559579       --> ..................................................
FD946581       --> ..................................................
FD578490       --> ..................................................
FD937700       --> ..................................................
FD572034       --> ..................................................
FD988852       --> ..................................................
FD970854       --> ..................................................
FD972146       --> ..................................................

               1151   -   1201
UN19960        --> GTGATACATTTTGAAGATGACATTGAGGAACTACAACAGTGGGATCATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- GTGATACATTTTGAAGATGACATTGAGGAACTACAACAGTGGGATCATCA
FD967113       <-- GTGATACATTTTGAAGATGACATTGAGGAACTACAACAGTGGGATCATCA
EW717407       --> ..................................................
EX903555       --> ..................................................
EY900305       --> ..................................................
FD559579       --> ..................................................
FD946581       --> ..................................................
FD578490       --> ..................................................
FD937700       --> ..................................................
FD572034       --> ..................................................
FD988852       --> ..................................................
FD970854       --> ..................................................
FD972146       --> ..................................................

               1201   -   1251
UN19960        --> GATATTTGGATTATGCCAAGCTCTCAACGATACCTGGATGGGATGGCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- GATATTTGGATTATGCCAAGCTCTCAACGATACCTGGATGGGATGGCGAA
FD967113       <-- GATATCTGGATTATGCCAAGCTCTCAACGATACCTGGATGGGATGGCGAA
EW717407       --> ..................................................
EX903555       --> ..................................................
EY900305       --> ..................................................
FD559579       --> ..................................................
FD946581       --> ..................................................
FD578490       --> ..................................................
FD937700       --> ..................................................
FD572034       --> ..................................................
FD988852       --> ..................................................
FD970854       --> ..................................................
FD972146       --> ..................................................

               1251   -   1301
UN19960        --> GAAAGGCCTACCTGTTCCTGTTTGATTCATTTACGAGCTGTGAGGTTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- GAAAGGCCTACCTGTTCCTGTTTGATTCATTTACGAGCTGTGAGGTTGAC
FD967113       <-- GAAAGGCCTACCTGTTCCTGTCTGATTCATTTACGAGCTGTGAGGTTGAC
EW717407       --> ..................................................
EX903555       --> ..................................................
EY900305       --> ..................................................
FD559579       --> ..................................................
FD946581       --> ..................................................
FD578490       --> ..................................................
FD937700       --> ..................................................
FD572034       --> ..................................................
FD988852       --> ..................................................
FD970854       --> ..................................................
FD972146       --> ..................................................

               1301   -   1351
UN19960        --> TTGAATATAAAGCCGAAGAGTCTCATATCCTAAGCTTTTGCCCTATGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- TTGAATATAAAGCCGAAGAGTCTCATATCCTAAGCTTTTGCCCTATGCTG
FD967113       <-- TTGAATATAAAGCCGAAGAGTCTCATATCCTAAGCTTTTGCCCTATGCTG
EW717407       --> ..................................................
EX903555       --> ..................................................
EY900305       --> ..................................................
FD559579       --> ..................................................
FD946581       --> ..................................................
FD578490       --> ..................................................
FD937700       --> ..................................................
FD572034       --> ..................................................
FD988852       --> ..................................................
FD970854       --> ..................................................
FD972146       --> ..................................................

               1351   -   1401
UN19960        --> TGTTTTGGAGACGATTTACATTTGTTCCATATTTGAAGTGTTTTTTTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- TGTTTTGGAGACGATTTACATTTGTTCCATATTTGAAGTGTTTTTTTACA
FD967113       <-- TGTTTTGGAGACGATTTACATTTGTTCCATATTTGAAGTGTTTTTTTACA
EW717407       --> ..................................................
EX903555       --> ..................................................
EY900305       --> ..................................................
FD559579       --> ..................................................
FD946581       --> ..................................................
FD578490       --> ..................................................
FD937700       --> ..................................................
FD572034       --> ..................................................
FD988852       --> ..................................................
FD970854       --> ..................................................
FD972146       --> ..................................................

               1401   -   1451
UN19960        --> AATTCATGTCCATCCCTTTAGGTTAATTTGATACTGAGAAAAAGATTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD968101       <-- AATTCATGTCCATCCCTTTAGGTTAATTTGATACTGAGAAAAAGATTGGG
FD967113       <-- AATTCATGTCCATCCCTTTAGGTTAATTTGATACTGAGAAAAAGATTGGG
EW717407       --> ..................................................
EX903555       --> ..................................................
EY900305       --> ..................................................
FD559579       --> ..................................................
FD946581       --> ..................................................
FD578490       --> ..................................................
FD937700       --> ..................................................
FD572034       --> ..................................................
FD988852       --> ..................................................
FD970854       --> ..................................................
FD972146       --> ..................................................

               1451   -   1501
UN19960        --> CATGGAATGAGGATTTTT
                   ~~~~~~~~~~~~~~~~~~
FD968101       <-- CATGGAATGAGGATTTTT
FD967113       <-- CATGGAATGAGGATTTTT
EW717407       --> ..................
EX903555       --> ..................
EY900305       --> ..................
FD559579       --> ..................
FD946581       --> ..................
FD578490       --> ..................
FD937700       --> ..................
FD572034       --> ..................
FD988852       --> ..................
FD970854       --> ..................
FD972146       --> ..................