RadishBase

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Alignment for radish unigene UN19994

               1      -     51
UN19994        --> GTTGAAAAACCATGTGTATTTCTTCTGTTCTGAGTACAATATATTATATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- ..................................................
EY938834       <-- ..................................................
EV567578       <-- ..................................................
FD551917       <-- ..................................................
FD986585       <-- ..................................................
EW731811       <-- ..................................................
EV549055       <-- ..................................................
EV570346       <-- ..................................................
EY915366       <-- ..................................................
FD535545       <-- ..................................................
EX770321       <-- ..................................................
EV572494       --> GTTGAAAAACCATGTGTATTTCTTCTGTTCTGAGTACAATATATTATATA
EX774534       --> ..cGAAAAACCATGTGTATTTCTTCTGTTCTGAGTACAATATATTATATA
EV529846       --> ..............TGTATTTCTTCTGTTATTAGTACAAGATATTATATT
FD531183       --> ..................................................
FD982815       --> ..................................................
EW736446       --> ..................................................

               51     -    101
UN19994        --> AAA-CATCCAGCACAATAATACTTCCACGGAAAGAAAGAAAAGTTTAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- ..................................................
EY938834       <-- ..................................................
EV567578       <-- ..................................................
FD551917       <-- ..................................................
FD986585       <-- ..................................................
EW731811       <-- ..................................................
EV549055       <-- ..................................................
EV570346       <-- ..................................................
EY915366       <-- ..................................................
FD535545       <-- ..................................................
EX770321       <-- ..................................................
EV572494       --> AAA-CATCCAGCACAATAATACTTCCACGGAAAGAAAGAAAAGTTTAATA
EX774534       --> AAA-CATCCAGCACAATAATACTTCCACGGAAAGAAA---AAGTTTAATA
EV529846       --> AAATCATCCAGCACAATAATACTTCCACGGAAAGAAAGAAAAGTTTAATA
FD531183       --> ........................CCACGGAAAGAAAGAAAAGTTTAATA
FD982815       --> .........................................gGTTTAATA
EW736446       --> ..................................................

               101    -    151
UN19994        --> TTTGAATCTTTATTCAATTGTGTGATATTTACCTGAGATCGATCACATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- ...........................................CACATTT
EY938834       <-- ..................................................
EV567578       <-- ..................................................
FD551917       <-- ..................................................
FD986585       <-- ..................................................
EW731811       <-- ..................................................
EV549055       <-- ..................................................
EV570346       <-- ..................................................
EY915366       <-- ..................................................
FD535545       <-- ..................................................
EX770321       <-- ..................................................
EV572494       --> TTTGAATCTTTATTCAATTGTGTGATATTTACCTGAGATCGATCACATTT
EX774534       --> TTTGAATATTTATTCAATTGTGTGATATTTACCTGAGATCGATCACATTT
EV529846       --> TTTGAATCTTTATTTCATTGTGTGATATTTACCTGAGACCGATCACATTT
FD531183       --> TTTGAATCTTTATTTCATTGTGTGATATTTACCTGAGACCGATCACATTT
FD982815       --> TTTGAATCTTTATTCAATTGTGTGAT--TTACCTGAGATCGATCACATTT
EW736446       --> ..................................................

               151    -    201
UN19994        --> TATTCTCGAGAGAAAACCACAATGGAGAAGATGAGATAGAGATTTAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- TATTCTCGAGAGAAAACCACAATGGAGAAGATAAGATAGAGATTTAAGGA  Raphanus raphanistrum subsp. maritimus
EY938834       <-- ...TCTCGAGAGAAA-CCACA-TGAA-AAGAT-AGATAGAGATTTAAGGA  Raphanus sativus cv Early Scarlet Globe
EV567578       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD551917       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986585       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW731811       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV549055       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570346       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY915366       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535545       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX770321       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV572494       --> TATTCTCGAGAGAAAACCACAATGGAGAAGATGAGATAGAGATTTAAGGA  Raphanus raphanistrum subsp. landra
EX774534       --> TATTCTCGAGAGAAAACCACAATGGAGAAGATGAGATAGAGATTTAAGGA  Raphanus raphanistrum subsp. landra
EV529846       --> TATTCTCGAGAGAAAACCACAATGGAGAAGATAAGATAGAGATTTAAGGA  Raphanus raphanistrum subsp. maritimus
FD531183       --> TATTCTCGAGAGAAAACCACAATGGAGAAGATAAGATAGAGATTTAAGGA  Raphanus raphanistrum subsp. maritimus
FD982815       --> TATTCTCGGGAGAAAACCACAATGGAGAAGATGAGATAGAGATTTAAGGA  Raphanus raphanistrum subsp. landra
EW736446       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               201    -    251
UN19994        --> TCAAAGAGCTGCCATGGAGTGCACTGAATCAATGACAGCGTCGATAAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- TCAAAGAGCTGCCATGGAGTGCACTGAATCAATGACAGCGTCGATAAGGT  Raphanus raphanistrum subsp. maritimus
EY938834       <-- TCAAAGAGCTGCCATGGAGTGCACTGAATCAATGACAGCGTCGATAAGGT  Raphanus sativus cv Early Scarlet Globe
EV567578       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD551917       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986585       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW731811       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV549055       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570346       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY915366       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535545       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX770321       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV572494       --> TCAAAGAGCTGCCATGGAGTGCACTGAATCAATGACAGAGTCGATAAGGT  Raphanus raphanistrum subsp. landra
EX774534       --> TCAAAGAGCTGCCATGGAGTGCACTGAATCAATGACAGAGTCGATAAGGT  Raphanus raphanistrum subsp. landra
EV529846       --> TCAAAGAGCTGCCATGGAGTGCACTGAATCAATGACAGCGTCGATAAGGT  Raphanus raphanistrum subsp. maritimus
FD531183       --> TCAAAGAGCTGCCATGGAGTGCACTGAATCAATGACAGCGTCGATAAGGT  Raphanus raphanistrum subsp. maritimus
FD982815       --> TCAAAGAGCTGCCATGGAGTGCACTGAATCAATGACAGAGTCGATAAGGT  Raphanus raphanistrum subsp. landra
EW736446       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               251    -    301
UN19994        --> CATGAGACTTGCTTGTACCTGCAAGCGTCAGATGTTTTGGTGCTTCTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- CATGAGACTTGCTTGTACCTGCAAGCGTCAGATGTTTTGGTGCTTCTGCT  Raphanus raphanistrum subsp. maritimus
EY938834       <-- CATGAGACTTGCTTGTAC-TGCAAGCGTCAGATGTTTTGGTGCTTCTGCT  Raphanus sativus cv Early Scarlet Globe
EV567578       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD551917       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986585       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW731811       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV549055       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570346       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY915366       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535545       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX770321       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV572494       --> CATGAGACTTGCTCGTACCTGCAAGTGTCAGATGTTTTGGTGCTTCAGCT  Raphanus raphanistrum subsp. landra
EX774534       --> CATGAGACTTGCTCGTGCCTGCAAGTGTCAAATGTTTTGGTGCTTCAGCT  Raphanus raphanistrum subsp. landra
EV529846       --> CATGAGACTTGCTTGTACCTGCAAGCGTCAGATGTTTTGGTGCTTCTGCT  Raphanus raphanistrum subsp. maritimus
FD531183       --> CATGAGACTTGCTTGTACCTGCAAGCGTCAGATGTTTTGGTGCTTCTGCT  Raphanus raphanistrum subsp. maritimus
FD982815       --> CATGAGACTTGCTCGTACCTGCAAGTGTCAGATGTTTTGGTGCTTCAGCT  Raphanus raphanistrum subsp. landra
EW736446       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               301    -    351
UN19994        --> CTATCGAAATAGAATGCACCAGAGACGAGCTTCTCCTTAGGCTGAAGTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- CTATCGAAATAGAATGCACCAGAGACGAGCTTCTCCTTAGGCTGAAGTGC
EY938834       <-- CTATCGAAATAGAATGCACCAGAGACGAGCTTCTCCTTAGGCTGAAGTGC
EV567578       <-- ...............GCACCAGAGACGAGCT-CT-CTTAGGCTGAAGTGC
FD551917       <-- ..................................................
FD986585       <-- ..................................................
EW731811       <-- ..................................................
EV549055       <-- ..................................................
EV570346       <-- ..................................................
EY915366       <-- ..................................................
FD535545       <-- ..................................................
EX770321       <-- ..................................................
EV572494       --> CTATCGAAATAGAATGCACCAGAGACGAGCTTCTCCTTAGGCTGAAGTGC
EX774534       --> CTATCGAAATAGAATGCACCAAAGACGAGCTTCTCCTTAGGCTGAAGTGC
EV529846       --> CTATCGAAATAGAATGCACCAGAGACGAGCTTCTCCTTAGGCTGAAGTGC
FD531183       --> CTATCGAAATAGAATGCACCAGAGACGAGCTTCTCCTTAGGCTGAAGTGC
FD982815       --> CTATCGAAATAGAATGCACCAGAGACGAGCTTCTCCTTAGGCTGAAGTGC
EW736446       --> ............................GCTTCTCCTTAGGCTGAAGTGC

               351    -    401
UN19994        --> TAGCCATACGACAGTGTCTGCTCCTTCTTCGCTTGTTCTAAGCTTACCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- TAGCCATACGACAGTGTCTGCTCCTTCTTCGCTTGTTCTAAGCTTACCAG  Raphanus raphanistrum subsp. maritimus
EY938834       <-- TAGCCATACGACAGTGTCTGCTCCTTCTTCGCTTGTTCTAAGCTTACCAG  Raphanus sativus cv Early Scarlet Globe
EV567578       <-- TAGCCATACCACAGTGTCTGCTC-TTCTTCGCTTGTTCTAAGCTTACCAG  Raphanus raphanistrum subsp. landra
FD551917       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986585       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW731811       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV549055       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570346       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY915366       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535545       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX770321       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV572494       --> TAGCCATACCACAGTGTCTGCTCCTTCTTCGCTTGTTCTAAGCTTACCAG  Raphanus raphanistrum subsp. landra
EX774534       --> TAGCCATACCACAGTGTCTGCTCCTTCTTCGCTTGTTCTAAGCTTACCAG  Raphanus raphanistrum subsp. landra
EV529846       --> TAGCCATACGACAGTGTCTGCTCCTTCTTCGCTTGTTCTAAGCTTACCAG  Raphanus raphanistrum subsp. maritimus
FD531183       --> TAGCCATACGACAGTGTCTGATCCTTCTTCGCTTGTTCTAAGCTTACCAG  Raphanus raphanistrum subsp. maritimus
FD982815       --> TAGCCATACCACAGTGTCTGCTCCTTCTTCGCTTGTTCTAAGCTTACCAG  Raphanus raphanistrum subsp. landra
EW736446       --> TAGCCATACGACAGTGCCTGCTCCTTCTTCGCTTGTTCTAAGCTTACCAG  Raphanus sativus cv Rat-Tail Radish #3870

               401    -    451
UN19994        --> AGAACGATTCTTTGAAACTGGGCAAACTCCTGGCGACACC-AGGTGTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- AGAACGATTCTTTGAAACTGGGCAAACTCCTGGCGACACC-AGGTGTCTC  Raphanus raphanistrum subsp. maritimus
EY938834       <-- AGAACGATTCTTTGAAACTGGGCAAACTCCTGGCGACACC-AGGTGTCTC  Raphanus sativus cv Early Scarlet Globe
EV567578       <-- AGAACGATTCTTTGAAACTGGGCAAACTCCTGGCCACACCCAGGTGTCTC  Raphanus raphanistrum subsp. landra
FD551917       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986585       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW731811       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV549055       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570346       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY915366       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535545       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX770321       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV572494       --> AGAACGATTCTTTGAAACTGGGCAAACTCCTGGCCACACC-AGGTGTCTC  Raphanus raphanistrum subsp. landra
EX774534       --> AGAACGATTCTTTGAAACTGGGCAAACTCCTGGCCACACC-AGGTGTCTC  Raphanus raphanistrum subsp. landra
EV529846       --> AGAACGATTCTTTGAAACTGGGCAAACTCCTGGCGACACC-AGGTGTCTC  Raphanus raphanistrum subsp. maritimus
FD531183       --> AGAACGATTCTTTGAAACTGGGCAAACTCCTGGCGACACC-AGGTGTCTC  Raphanus raphanistrum subsp. maritimus
FD982815       --> AGAACGATTCTTTGAAACTGGGCAAACTCCTGGCCACACC-AGGTGTCTC  Raphanus raphanistrum subsp. landra
EW736446       --> AAAACGATTCTTTGAAACTGGGCAAACTCCTGGCGACACC-AGGTGTCTC  Raphanus sativus cv Rat-Tail Radish #3870

               451    -    501
UN19994        --> AGCCCAGCCAGGGTGCATTGAGTAGAAACCTATGCCTTTGTTCTTGTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- AGCCCAGCCAGGGTGCATCGAGTAGAAACCTATGCCTTTGTTCTTGTACT  Raphanus raphanistrum subsp. maritimus
EY938834       <-- AGCCCAGCCAGGGTGCATCGAGTAGAAACCTATGCCTTTGTTCTTGTACT  Raphanus sativus cv Early Scarlet Globe
EV567578       <-- AGCCCAGCCAGGGTGCATTGAGTAGAAACCTATGCCTTTGTCTTTGTACT  Raphanus raphanistrum subsp. landra
FD551917       <-- ...CCAGCCAGGGTGCAT-GAGTAGAAAC-TATGCCTTTGTTCT-GTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986585       <-- .........................................cCTTGTACT  Raphanus raphanistrum subsp. landra
EW731811       <-- ...........................................cTGTACT  Raphanus sativus cv Rat-Tail Radish #3870
EV549055       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570346       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY915366       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535545       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX770321       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV572494       --> AGCCCAGCCAGGGTGCATTGAGTAGAAACCTATGCCTTTGTCCTTGTACT  Raphanus raphanistrum subsp. landra
EX774534       --> AGCCCAGCCAGGGTGCATTGAGTAGAAACCTATGCCTTTGTCCTTGTACT  Raphanus raphanistrum subsp. landra
EV529846       --> AGCCCAGCCAGGGTGCATCGAGTAGAAACCTATGCCTTTGTTCTTGTACT  Raphanus raphanistrum subsp. maritimus
FD531183       --> AGCCCAGCCAGGGTGCATCGAGTAGAAACCTATGCCTTTGTTCTTGTACT  Raphanus raphanistrum subsp. maritimus
FD982815       --> AGCCCAGCCAGGGTGCATTGAGTAGAAACCTATGCCTTTGTCCTTGTACT  Raphanus raphanistrum subsp. landra
EW736446       --> AGCCCAGCCAGGGTGCATCGAGTAGAAACCTATGCCTTTGTTCTTGTACT  Raphanus sativus cv Rat-Tail Radish #3870

               501    -    551
UN19994        --> TATCAGCCC-ATTTTTCTGTCAGAGCCACCTGGATTCTTTTATTCCGTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- TATCAGCCC-ATTTTTCTGTCAGAGCCACCTGGATTCTTTTATTCCGTGC
EY938834       <-- TATCAGCCC-ATTTTTCTGTCAGAGCCACCTGGATTCTTTTATTCCGTGC
EV567578       <-- TATCAGCCCCATTTTTCTGTCGGAGCCACCTGGATTCTTTTATTCCGTGC
FD551917       <-- TATCAGACC-ATTTT-CTGTCAGAGCCACCTGGATTCTTT-ATTCCGTGC
FD986585       <-- TATCAGCCC-ATTTT-CTGTCAGAGCCACCTGGATTCTTTTATTCCGTGC
EW731811       <-- -ATCAGCCC-ATTTT-CTGTCAGAGCCACCTGGATTCTTT-ATTCCGTGC
EV549055       <-- ................CTGTCAGAGCCACCTGGATTCTTTTATTCCGTGC
EV570346       <-- ................CTGTCAGAGCCACCTGGATTCTTTTATTCCGTGC
EY915366       <-- .........................................ATTCCGTGC
FD535545       <-- ...........................................TCCGTGC
EX770321       <-- ..................................................
EV572494       --> TATCAGCCC-ATTTTTCTGTCGGAGCCACCTGGATTCTTTTATTCCGTGC
EX774534       --> TATCAGCCC-ATTTTTCTGTCAGAGCCACCTGGATTCTTTTATTCCGTGC
EV529846       --> TATCAGCCC-ATTTTTCTGTCAGAGCCACCTGGATTCTTTTATTCCGTGC
FD531183       --> TATCGGCCC-ATTTTTCTGTCAGAGCCACCTGGATTCTTTTATTCCGTGC
FD982815       --> TATCAGCCC-ATTTTTCTGTCAGAGCCACCTGGATTCTTTTATTCCGTGC
EW736446       --> TATCAGCCC-ATTTTTCTGTCAGAACCACCTGGATTCTTTTATTCCGTGC

               551    -    601
UN19994        --> GTATTGTAACACTCCATCGAACTTTTCACCACTAAACTGAAGATCTGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- GTATTGTAACACTCCATCGAACTTTTCACCACTAAACTGAAGATCTGTTG
EY938834       <-- GTATTGTAACACTCCATCGAACTTTTCACCACTAAACTGAAGATCTGTTG
EV567578       <-- GTATTGTAACACTCCATCGAACTTTTCACCACTAAACTGAAGATCTGTTG
FD551917       <-- GTATTGTAACACTCCATCAAACTTTTCATCACTAAACTGCAGATCTGTTG
FD986585       <-- GTATTGTAACACTCCATCGAACTTTTCACCACTAAACTGAAGATCTGTTG
EW731811       <-- GTATTGTAACACTCCATCGAACTTTTCACCACTAAACTGAAGATCTGTTG
EV549055       <-- GTATTGTAACACTCCATCGAACTTTTCACCACTAAACTGAAGATCTGTTG
EV570346       <-- GTATTGTAACACTCCATCGAACTTTTCACCACTAAACTGAAGATCTGTTG
EY915366       <-- GTATTGTAACACTCCATCGAACTTTTCACCACTAAACTGAAGATCTGTTG
FD535545       <-- GTGTTGTAACACTCCATCGAACTTTTCACCACTAAACTGAAGATCTGTTG
EX770321       <-- ......gtACACTCCATCGAACTTT-CA-CACTAAACTGAAGATCTGT-G
EV572494       --> GTATTGTAACACTCCATCGAACTTTTCACCACTAAACTGAAGATCTGTTG
EX774534       --> GTATTGTAACACTCCATCGAACTTTTCACCACTAAACTGAAGATCTGTTG
EV529846       --> GTATTGTAACACTCCATCGAACTTTTCACCACTAAACTGAAGATCTGTTG
FD531183       --> GTGTTGTAACACTCCATCGAACTTTTCACCACTAAACTGAAGATCTGTTG
FD982815       --> GTATTGTAACACTCCATCGAACTTTTCACCACTAAACTGAAGATCTGTTG
EW736446       --> GTATTGTAACACTCCATCGAACTTTTCACCACTAAACTGAAGATCTGTTG

               601    -    651
UN19994        --> TAAGTGGCGACGTGTACATTCCACC-AGAGGAGACGGTGATGACTTTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- TAAGTGGCGACGTGTACATTCCACC-AGAGGAGACGGTGATGACTTTGGA
EY938834       <-- TAAGTGGCGACGTGTACATTCCACC-AGAGGAGACGGTGATGACTTTGGA
EV567578       <-- TAAGTGGCGACGTGTACATTCCACC-AGAGGAGACGGTGATGACTTTGGA
FD551917       <-- TAAGTGGCGACGTGTACATTCCACC-AGAGGAGACGGTGATGACTTTGGA
FD986585       <-- TAAGTGGCGACGTGTACATTCCACC-AGAGGAGACGGTGATGACTTTGGA
EW731811       <-- TAAGTGGCGACGTGTACATTCCACCCAGAGGAGACGGTGATGACTTTGGA
EV549055       <-- TAAGTGGCGACGTGTACATTCCACC-AGAGGAGACGGTGATGACTTTGGA
EV570346       <-- TAAGTGGCGACGTGTACATTCCACC-AGAGGAGACGGTGATGACTTTGGA
EY915366       <-- TAAGTGGCGACGTGTACATTCCACC-AGAGGAGACGGTGATGACTTTGGA
FD535545       <-- TAAGTGGCGACGTGTACATTCCACC-AGAGGAGACGGTGATGACTTTGGA
EX770321       <-- TAAGTGGCGACGTGTACATTCCACC-AGAG-AGACGGTGATGACTTTGGA
EV572494       --> TAAGTGGCGACGTGTACATTCCACC-AGAGGAGACGGTGATGACTTTGGA
EX774534       --> TAAGTGGCGACGTGTACATTCCACC-AGAGGAGACGGTGATGACTTTGGA
EV529846       --> TAAGTGGCGACGTGTACATTCCACC-AGAGGAGACGGTGATGACTTTGGA
FD531183       --> TAAGTGGCGACGTGTACATTCCACC-AGAGGAGACGGTGATGACTTTGGA
FD982815       --> TAAGTGGCGA........................................
EW736446       --> TAAGTGGCGACGTGTACATTCCACC.........................

               651    -    701
UN19994        --> GTCAGGTGAGGCTTTCTCCAACAGTGGAAGCATCAGCTCTGTCATCGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- GTCAGGTGAGGCTTTCTCCAACAGTGGAAGCATCAGCTCTGCCATCGTGT
EY938834       <-- GTCAGGTGAGGCTTTCTCCAACAGTGGAAGCATCAGCTCTGTCATCGTGT
EV567578       <-- GTCAGGTGAGGCTTTCTCCAACAGTGGAAGCATCAGCTCTGTCATCGTGT
FD551917       <-- GTCAGGTGAGGCTTTCTCCAACAGTGGAAGCATCAGCTCTGTCATCGTGT
FD986585       <-- GTCAGGTGAGGCTTTCTCCAACAGTGGAAGCATCAGCTCTGTCATCGTGT
EW731811       <-- GTCAGGTGAGGCTTTCTCCAACAGTGGAAGCATCAGCTCTGTCATCGTGT
EV549055       <-- GTCAGGTGAGGCTTTCTCCAAAAGTGGAAGCACCAGCTCTGTCATCGTGT
EV570346       <-- GTCAGGTGAGGCTTTCTCCAACAGTGGAAGCATCAGCTCTGTCATTGTGT
EY915366       <-- GTCAGGTGAGGCTTTCTCCAACAGTGGAAGCATCAGCTCTGTCATCGTGT
FD535545       <-- GTCAGGTGAGGCTTTCTCCAACAGTGGAAGCATCAGCTCTGTCATCGTGT
EX770321       <-- GTCAGGTGAGGCTTTCTCCAACAGTGGAAGCATCAGCTCTGTCATCGTGT
EV572494       --> GTCAGGTGAGGCTTTCTCCAACAGTGGAAGCATCAGCTCTGTCATCGTGT
EX774534       --> G.................................................
EV529846       --> GTCAGGTGAGGCTTTCTCCAACAGTGGAAGCATCAGCTCTGCCATCGTGT
FD531183       --> GTCAGGTGAGGCTTTCTCCAACAGTGGAAGCATCAGCTCTGTCATCGTGT
FD982815       --> ..................................................
EW736446       --> ..................................................

               701    -    751
UN19994        --> ATGTCCCAAGTACATTTATTGCGAAGTTAAGCTCGAATCCTTCGGGTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- ATGTCCCAAGTACATTTATTGCGAAGTTAAGCTCGAATCCATCGGGTGTA  Raphanus raphanistrum subsp. maritimus
EY938834       <-- ATGTCCCAAGTACATTTATTGCGAAGTTAAGCTCGAATCCATCGGGTGTA  Raphanus sativus cv Early Scarlet Globe
EV567578       <-- ATGTCCCAAGTACATTTATTGCGAAGTTCAGCTCGAATCCTTCGGGTGTA  Raphanus raphanistrum subsp. landra
FD551917       <-- ATGTCCCAAGTACATTTATTGCGAAGTTCAGCTCGAATCCTTCAGGTGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986585       <-- ATGTCCCAAGTACATTTATTGCGAAGTTCAGCTCGAATCCTTCGGGTGTA  Raphanus raphanistrum subsp. landra
EW731811       <-- ATGTCCCAAGTACATTTATTGCGAAGTTAAGCTCGAATCCATCGGGTGTA  Raphanus sativus cv Rat-Tail Radish #3870
EV549055       <-- ATGTCCCAAGTACATTTACTGCGAAGTTGAGCTCGAATCCTTCAGGTGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570346       <-- ATGTCCCAAGTACATTTATTGCGAAGTTCAACTCGAATCCTTCGGGTGTA  Raphanus raphanistrum subsp. landra
EY915366       <-- ATGTCCCAAGTACATTTATTGCGAAGTTAAGCTCGAATCCATCGGGTGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD535545       <-- ATGTCCCAAGTACATTTATTGCGAAGTTAAGCTCGAATCCATCGGGTGTA  Raphanus raphanistrum subsp. maritimus
EX770321       <-- ATGTCCCAAGTACATTTATTGCGAAGTTCAGCTCGAATCCTTCGGGTGTA  Raphanus raphanistrum subsp. landra
EV572494       --> ATGTCCCAAGTACATTTATTGCGAAGTTCAGCTCGAATCCTTCGGGTGTA  Raphanus raphanistrum subsp. landra
EX774534       --> ..................................................  Raphanus raphanistrum subsp. landra
EV529846       --> ATGTCCCAAGTACATTTATTGCGAAGTTAAGCTCGAATCCATCGGGTGTA  Raphanus raphanistrum subsp. maritimus
FD531183       --> ATGTCCCAAGTACATTTATTGCGAAGTTAAGCTCGAATCCATCGGGTGTA  Raphanus raphanistrum subsp. maritimus
FD982815       --> ..................................................  Raphanus raphanistrum subsp. landra
EW736446       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               751    -    801
UN19994        --> GTAGTCCGTTTGTTCTCGAGCAAACCGGCGTTATTAACCAGGACATGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- GTAGTCCGTTTGTTCTCGAGCAGACCGGCGTTATTAACCAGGACATGAAC
EY938834       <-- GTAGTCCGTTTGTTCTCGAGCAAACCGGCGTTATTAACCAGGACATGAAC
EV567578       <-- GTAGTCCGTTTGTTCTCGAGCAAACCGGCGTTATTAACCAGGACATGAAC
FD551917       <-- GTAGTCCGTTTGTTCTCGAGCAAACCGGCGTTATTAACCAGGACATGAAC
FD986585       <-- GTAGTCCGTTTGTTCTCGAGCAAAACGGCGTTATTAACCAGGACATGAAC
EW731811       <-- GTAGTCCGTTTGTTCTCGAGCAAACCGGCGTTATTAACCAGGACATGAAC
EV549055       <-- GTAGTCCGTTTGTTCTCGAGCAAACCGGCGTTATTAACCAGGACATGAAC
EV570346       <-- GTAGTCCGTTTGTTCTCGAGCAAACCGGCGTTATTAACCAGGACATGAAC
EY915366       <-- GTAGTCCGTTTGTTCTCGAGCAAAACGGCGTTATTAACCAGGACATGAAC
FD535545       <-- GTAGTCCGTTTGTTCTCGAGCAAACCGGCGTTATTAACCAGGACATGAAC
EX770321       <-- GTAGTCCGTTTGTTCTCGAGCAAACCGGCGTTATTAACCAGGACATGAAC
EV572494       --> GTAGTCCGTTTGTTCTCGAGCAAACCGGCGTTATTAACCAGGACATGAAC
EX774534       --> ..................................................
EV529846       --> GTAGTCCGTTTGTTCTCGAGCAGACCGGCGTTATTAACCAGGACATGAAC
FD531183       --> GTAGTCCGTTTGTTCTCGAGCAAACCGGCGTTATTAACCAGGACATGAAC
FD982815       --> ..................................................
EW736446       --> ..................................................

               801    -    851
UN19994        --> AGGAACATCCTTGGAAGCAAAAGTCGAAGCAAATGACTTTATATCATTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- AGGAACATCCTTGGAAGCAAAAGTCGAAGCAAATGACTTTATATCATTAA
EY938834       <-- AGGAACATCCTTGGAAGCAAAAGTCGAAGCAAATGACTTTATATCATTAA
EV567578       <-- AGGAACATCCTTGGAAGCAAAAGTCGAAGCAAATGACTTTATATCATTAA
FD551917       <-- AGGAACATCCTTGGAAGCAAAAGTCGAAGCAAATGACTTTATATCGTTAA
FD986585       <-- AGGAACATCCTTGGAAGCAAAAGTCGAAGCAAATGACTTTATATCATTAA
EW731811       <-- AGGAACATCCTTGGAAGCAAAAGTCGAAGCAAATGACTTTATATCATTAA
EV549055       <-- AGGAACATCCTTGGAAGCAAAAGTCGAAGCAAATGACTTTATATCATTAA
EV570346       <-- AGGAACATCCTTGGAAGCAAAAGTCGAAGCAAATGACTTTATATCATTAA
EY915366       <-- AGGAACATCCTTGGAAGCAAAAGTCGAAGCAAATGACTTTATATCATTAA
FD535545       <-- AGGAACATCCTTGGAAGCAAAAGTCGAAG-AAATGACTTTATATCATTAA
EX770321       <-- AGGAACATCCTTGGAAGCAAAAGTCGAAGCAAATGACTTTATATCATTAA
EV572494       --> AGGAACATCCTTGGAAGCAAAAGTCGAAGCAAATGACTTTATATCATTAA
EX774534       --> ..................................................
EV529846       --> AGGAACATCCTTGGAAGCAAAAGTCGAAGCAAATGACTTTATATCATTAA
FD531183       --> AGGAACATCCTTGGAAGCAAAAGTCGAAG-AAATGACTTTATATCATTAA
FD982815       --> ..................................................
EW736446       --> ..................................................

               851    -    901
UN19994        --> CAGAAGACAAATCACAAACTTCAAGGTAGACATTCTGGTTTCCTGTAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- CAGAAGACAAAT......................................
EY938834       <-- CAGAAGACAAATCACAAACTTCAAGGTAGACATTCTGGTTTCCTGTAGAG
EV567578       <-- CAGAAGACAAATCACAAACTTCAAGGTAGACATTCTGGTTTCCTGTAGAG
FD551917       <-- CAGAAGACAAATCAAAAACTTCAAGGTAGACATTCTGGTTTCCTGTAGAG
FD986585       <-- CAGAAGACAAATCACAAACTTCAAGGTAGACATTCTGGTTTCCTGTAGAG
EW731811       <-- CAGAAGACAAATCACAAACTTCAAGGTAGACATTCTGGTTTCCTGTAGAG
EV549055       <-- CAGAAGACAAATCACAAACTTCAAGGTAGACATTCTGGTTTCCTGTAGAG
EV570346       <-- CAGAAGACAAATCACAAACTTCACGGTAGACATTCTGGTTTCCTGTAGAG
EY915366       <-- CAGAAGACAAATCACAAACTTCAAGGTAGACATTCTGGTTTCCTGTAGAG
FD535545       <-- CAGAAGACAAATCACAAACTTCAAGGTAGACATTCTGGTTTCCTGTAGAG
EX770321       <-- CAGAAGACAAATCACAAACTTCAAGGTAGACATTCTGGTTTCCTGTAGAG
EV572494       --> CA................................................
EX774534       --> ..................................................
EV529846       --> CAGAAGACAAATCACAAACTT.............................
FD531183       --> CAGAAGACAAATCACAAACTTCAAG-TAGACATTCTGGTTTCCTGTAGAG
FD982815       --> ..................................................
EW736446       --> ..................................................

               901    -    951
UN19994        --> TTTTGAATCTTAGAAAGAGCCTCTTCTCCTCTTTCCTTGTTCCGACACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- ..................................................
EY938834       <-- TTTTGAAT..........................................
EV567578       <-- TTTTGAATCTTAGAAAGAGCCTCTTCTCCTCTTTCCTTGTTCCGACACAC
FD551917       <-- TTTTGAATCTTAGAAAGAGCCTCTTGTCCTCTTTCTTTGTTCCGACACAC
FD986585       <-- TTTTGAATCTTAGAAAGAGCCTCTTCTCCTCTTTCCTTGTTCCGACACAC
EW731811       <-- TTTTGAATCTTAGAAAGAGCCTCTTCTCCTCTTTCCTTGTTCCGACACAC
EV549055       <-- TTTTGAATCTTAGAAAGAGCCTCTTCTCCTCTTTCCTTGTTCCGACACAC
EV570346       <-- TTTTGAATCTTAGAAAGAGCCTCTTCTCCTCTTTCCTTGTTCCGACACAC
EY915366       <-- TTTTGAATCTTAGAAAGAGCCTCTTCTCCTCTTTCCTTGTTCCGACACAC
FD535545       <-- TTTTGAATCTTAGAAAGAGCCTCTTCTCCTCTTTCCTTGTTCCGACACAC
EX770321       <-- TTTTGAATCTTAGAAAGAGCCTCTTCTCCTCTTTCCTTGTTCCGACACAC
EV572494       --> ..................................................
EX774534       --> ..................................................
EV529846       --> ..................................................
FD531183       --> TTT-G-ATCTTAGAAAGAGC-TCTTCTC-TCTTTCCTgtcc.........
FD982815       --> ..................................................
EW736446       --> ..................................................

               951    -   1001
UN19994        --> CATGTAAACATTTGCTCCACGTGAAGCAAGACCTTCAGCAGCGGCGTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- ..................................................
EY938834       <-- ..................................................
EV567578       <-- CATGTAAACATTTGCTCCACGTGAAGCAAGACCTTCAGCAGCGGCGTAAC
FD551917       <-- CATGTAAACATTTGCTCCACGAGAAGCAAGACCTTCAGCAGCGGCGTAAC
FD986585       <-- CATGTAAACATTTGCTCCACGTGAAGCAAGACCTTCAGCAGCGGCGTAAC
EW731811       <-- CATGTAAACATTGGCTCCACGTGAAGCGAGACCTTCAGCAGCGGCGTAAC
EV549055       <-- CATGTAAACATTTGCTCCACGTGAAGCAAGACCTTCAGCAGCGGCGTAAC
EV570346       <-- CATGTAAACATTTGCTCCACGTGAAGCAAGACCTTCAGCAGCGGCGTAAC
EY915366       <-- CATGTAAACATTTGCTCCACGTGAAGCAAGACCTTCAGCAGCGGCGTAAC
FD535545       <-- CATGTAAACATTGGCTCCACGTGAAGCAAGACCTTCAGCAGCGGCGTAAC
EX770321       <-- CATGTAAACATTTGCTCCACGTGAAGCAAGACCTTCAGCAGCGGCGTAAC
EV572494       --> ..................................................
EX774534       --> ..................................................
EV529846       --> ..................................................
FD531183       --> ..................................................
FD982815       --> ..................................................
EW736446       --> ..................................................

               1001   -   1051
UN19994        --> CAATACCAGAGTTAGCTCCAGTGACCACACAATTCTTTCCTTGTATTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- ..................................................
EY938834       <-- ..................................................
EV567578       <-- CAATACCAGAGTTAGCTCCAGTGACCACACAATTCTTTCCTTGTATTTGT
FD551917       <-- CAATACCAGAGTTAGCTCCAGTGACCACACAATTCTTTCCTTGTATTTGT
FD986585       <-- CAATACCAGAGTTAGCTCCAGTGACCACACAATTCTTTCCTTGTATTTGT
EW731811       <-- CAATACCAGAGTTAGCTCCAGTGACCACACAATTCTTTCCTTGTATTTGT
EV549055       <-- CAATACCAGAGTTAGCTCCAGTGACCACACAATTCTTTCCTTGTATTTGT
EV570346       <-- CAATACCAGAGTTAGCTCCAGTGACCACACAATTCTTTCCTTGTATTTGT
EY915366       <-- CAATACCAGAGTTAGCTCCAGTGACCACACAATTCTTTCCTTGTATTTGT
FD535545       <-- CAATACCAGAGTTAGCTCCAGTGACCACACAATTCTTTCCTTGTATTTGT
EX770321       <-- CAATACCAGAGTTAGCTCCAGTGACCACACAATTCTTTCCTTGTATTTGT
EV572494       --> ..................................................
EX774534       --> ..................................................
EV529846       --> ..................................................
FD531183       --> ..................................................
FD982815       --> ..................................................
EW736446       --> ..................................................

               1051   -   1101
UN19994        --> ATCTGCATATCTTCAGGTTTGAACTTCTTTGAATGGTCTAGGAAACCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- ..................................................
EY938834       <-- ..................................................
EV567578       <-- ATCTGCATATCTTCAGGTTTGAACTTCTTTGAATGGTCTAGGAAACCATT
FD551917       <-- ATCTGCATATCTTCAGGTTTGAACTTCTTTGAATGGTCTAGGAAACCATT
FD986585       <-- ATCTGCATATCTTCAGGTTTGAACTTCTTTGAATGGTCTAGGAAACCATT
EW731811       <-- ATCTGCATATCTTCAGGTTTGAACTTCTTTGAATGGTCTAGGAAACCATT
EV549055       <-- ATCTGCATATCTTCAGGTTTGAACTTCTTTGAATGATCTAGGAAACCATT
EV570346       <-- ATCTGCATATCTTCAGGTTTGAACTTCTTTGAATGGTCTAGGAAACCATT
EY915366       <-- ATCTGCATATCTTCAGGTTTGAACTTCTTTGAATGGTCTAGGAAACCATT
FD535545       <-- ATCTGCATATCTTCAGGTTTGAACTTCTTTGAATGGTCTAGGAAACCATT
EX770321       <-- ATCTGCATATCTTCAGGTTTGAACTTCTTTGAATGGTCTAGGAAACCATT
EV572494       --> ..................................................
EX774534       --> ..................................................
EV529846       --> ..................................................
FD531183       --> ..................................................
FD982815       --> ..................................................
EW736446       --> ..................................................

               1101   -   1151
UN19994        --> CTTGGTGAAATTCATATAGCCATAAATCCCGAAAGCGGTTGATCTCCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- ..................................................
EY938834       <-- ..................................................
EV567578       <-- CTTGGTGAAATTCATATAGCCATAAATCCCGAAAGCGGTTGATCTCCATG
FD551917       <-- CTTGGTGAAATTCATATAGCCATAAATCCCGAAAGCGGTTGATCTCCATG
FD986585       <-- CTTGGTGAAATTCATATAGCCATAAATCCCGAAAGCGGTTGATCTCCATG
EW731811       <-- CTTGGTGAAATTCATATAGCCATAAATCCCGAAAGCGGTTGATCTCCATG
EV549055       <-- CTTGGTGAAATTCATATAGCCATAAATCCCGAAAGCGGTTGATCTC....
EV570346       <-- CTTGGTGAAATTCATATAGCCATAAATCCCGAAAGCGGTTGATCTCCATG
EY915366       <-- CTTGGTGAAATTCATATAGCCATAAATCCCGAAAGCGGTTGATCTCCATG
FD535545       <-- CTTGGTGAAATTCATATAGCCATAAATCCCGAAAGCGGTTGATCTCCATG
EX770321       <-- CTTGGTGAAATTCATATAGCCATAAATCCCGAAAGCGGTTGATCTCCATG
EV572494       --> ..................................................
EX774534       --> ..................................................
EV529846       --> ..................................................
FD531183       --> ..................................................
FD982815       --> ..................................................
EW736446       --> ..................................................

               1151   -   1201
UN19994        --> TCTTTAAGAGGAACATTTTGGTTTAGTTACGGAAGATGAT---AAGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- ..................................................
EY938834       <-- ..................................................
EV567578       <-- TCTTTAAGAGGAACATTTTGGTTTAGTTACcc..................
FD551917       <-- TCTTTAAGAGGAACATTTTGGTTTAGTTACGGAAGATGATGATAAGATGA
FD986585       <-- TCTTTAAGAGGAACATTTTGGTTTAGTTACGGAAGATGAT---AAGATGA
EW731811       <-- TCTTTAAGAGGAACATTTTGGTTTAGTTACGGAAGATGATGATAAGATGA
EV549055       <-- ..................................................
EV570346       <-- TCTTTAAGAGGAACATTTTGGTTTAGTTACGGAAGATGAT---AAGATAA
EY915366       <-- TCTTTAAGAGGAACATTTTGGTTTAGTTACGGAAGATGAT---AAGATGA
FD535545       <-- TCTTTAAGAGGAATATTTTGGTTTAGTTACGGAAGATGATGATAAGATGA
EX770321       <-- TCTTTAAGAGGAACATTTTGGTTTAGTTACGGAAGATGAT---AAGATGA
EV572494       --> ..................................................
EX774534       --> ..................................................
EV529846       --> ..................................................
FD531183       --> ..................................................
FD982815       --> ..................................................
EW736446       --> ..................................................

               1201   -   1251
UN19994        --> TGCGAGTTCCTGAGTTGGTGGAGTGCGAGAGAGGTGTTAGATTAGTAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524991       <-- ..................................................
EY938834       <-- ..................................................
EV567578       <-- ..................................................
FD551917       <-- TGCGAGTTCCTGAGTTGGTGGA--GAGAGAGAGGTGTTAGATTcc.....
FD986585       <-- TGCGAGTTCCTGAGTTGGTGGAGTGCGAGAGAGGTGTTAGATTAGTAGTA
EW731811       <-- TGCGAGTTCCTGAGTTGGTGGA--GAGAGAGAGGTGTTAGATTAGTCGTA
EV549055       <-- ..................................................
EV570346       <-- TGCGAGTTCCTGAGTTGGTGGAGTGCGAGAGAGGTGTTAGATTAGTAGTA
EY915366       <-- TGCGAGTTCCTGAGTTGGTGGGGTGCGAGAGAGGTGTTAGATTcc.....
FD535545       <-- TGCGAGTTCCTGAGTTGGTGGA--GAGAGAGAGGTGTTAGATTAGTCGTA
EX770321       <-- TGCGAGTCCCTGAGTTGGTGGAGTGCGAGAGAGGTGTTAGATTcc.....
EV572494       --> ..................................................
EX774534       --> ..................................................
EV529846       --> ..................................................
FD531183       --> ..................................................
FD982815       --> ..................................................
EW736446       --> ..................................................

               1251   -   1301
UN19994        --> ACGGTTCCCCC
                   ~~~~~~~~~~~
EV524991       <-- ...........
EY938834       <-- ...........
EV567578       <-- ...........
FD551917       <-- ...........
FD986585       <-- ACGGTTCCCC.
EW731811       <-- ACGGTg.....
EV549055       <-- ...........
EV570346       <-- ACGGTTCCCCC
EY915366       <-- ...........
FD535545       <-- ...........
EX770321       <-- ...........
EV572494       --> ...........
EX774534       --> ...........
EV529846       --> ...........
FD531183       --> ...........
FD982815       --> ...........
EW736446       --> ...........