1 - 51
UN20012 --> ATAGTTTTGGGCTTTGATAAATATCATTAATAAAATCATACATTTAATGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW724228 <-- ..................................................
EV551999 <-- ..................................................
FD979400 <-- ..................................................
FD948519 <-- ..................................................
EX901877 --> ATAGTTTTGGGCTTTGATAAATATCATTAATAAAATCATACATTTAATGA
EV547001 --> ........GGGCTTTGATAAATATCATTAATAAAATCATACATTTAATGA
FD565605 --> ........GGGCTTTGATAAATATCATTAATAAAATCATACATTTAATGA
FD936921 --> ........GGGCTTTGATAAATATCATTAATAAAATCATACATTTAATGA
FD944290 --> ........GGGCTTTGATAAATATCATTAATAAAATCATACATTTAATGA
FD975441 --> ........GGGCTTTGATAAATATCATTAATAAAATCATACATTTAATGA
51 - 101
UN20012 --> TAAATCTATCATAATATGAGAAAAGGAAACAGAGAGAGCTAGGGTGAGAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW724228 <-- .................................................. Raphanus sativus cv Early Scarlet Globe
EV551999 <-- .................................................. Raphanus raphanistrum subsp. raphanistrum (NY)
FD979400 <-- .................................................. Raphanus raphanistrum subsp. raphanistrum (NY)
FD948519 <-- .................................................. Raphanus sativus cv Early Scarlet Globe
EX901877 --> TAAATCTATCATAATATGAGAAAAGGAAACAGAGAGGGCTAGGGTGAGAT Raphanus sativus cv Early Scarlet Globe
EV547001 --> TAAATCTATCATAATATGAGAAAAGGAAACAGAAAGAGCTAGGGTGAGAT Raphanus raphanistrum subsp. raphanistrum (NY)
FD565605 --> TAAATCTATCATAATATGAGAAAAGGAAACAGAAAGAGCTAGGGTGAGAT Raphanus sativus var. oleiformis
FD936921 --> TAAATCTATCATAATATGAAAAAAGGAAACAGAAAGAGCTAGGGTGAGAT Raphanus sativus var. oleiformis
FD944290 --> TAAATCTATCATAATATGAGAAAAGGAAACAGAGAGAGCTAGGGTGAGAT Raphanus sativus cv Early Scarlet Globe
FD975441 --> TAAATCTATCATAATATGAGAAAAGGAAACAGAGAGAGCTAGGGTGAGAT Raphanus raphanistrum subsp. raphanistrum (NY)
101 - 151
UN20012 --> GCTGTAAATTACAATCAACTCATCTCCTAGTCTCTTGTGTATATCCATAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW724228 <-- ..................................................
EV551999 <-- ..................................................
FD979400 <-- ..................................................
FD948519 <-- ..................................................
EX901877 --> GCTGTAAATTA.......................................
EV547001 --> GCTGTAAATTACAATCAACTCATCTCCTAGTCTCTTGTGTATATCCATAC
FD565605 --> GCTGTAAATTACAATCAACTCATCTCCTAGTCTCTTGTGTATATCCATAC
FD936921 --> GCTGTAAATTACAATCAACTCATCTCCTAATCTCTTGTGTATATCCATAC
FD944290 --> GCTGTAGATTACAATCAACTCGTCTCCTAGTCTCTTGTGTATATCCATAC
FD975441 --> GCTGTAGATTACAATCAACTCATCTCCTAGTCTCTTGTGTATATCCATAC
151 - 201
UN20012 --> ATCTCTATTGCTTTGGGTGAGAGTATTCCTAAGGATCTGAATACGTGATC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW724228 <-- ...............GGTGAGAGTATTC-TAAGGATCTGGATACGTGATC
EV551999 <-- ..................................................
FD979400 <-- ..................................................
FD948519 <-- ..................................................
EX901877 --> ..................................................
EV547001 --> ATCTCTATTGCTTTGGGTGAGAGTATTCCTAAGGATCTGAATACGTGATC
FD565605 --> ATCTCTATTGCTTTGGGTGAGAGTCTTCCTAAGGATCTGAATACGTGATC
FD936921 --> ATCTCTATTGCTTTGGGTGAGAGTCTTCCTAAGGATCTGAATACGTGATC
FD944290 --> ATCTCTATTGCTTTGGGTGAGAGTATTCCTAAGGACCTGAATACGTGATC
FD975441 --> ATCTCTATTGATTTGGGTGAGAGTATTCCTAAGGATCTGAATACGTGATC
201 - 251
UN20012 --> AAGTGTGTTTGTGTTCTAGAGTAACAATAAGCTATAACCATTTGACTGAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW724228 <-- AAGTGTGTTTGTGTTCTAGAGTAACAATAAGCTATAACCATTTGACTGAT
EV551999 <-- ............GTTCTAGAGTAACAATAAGCTATAACCATTTGACTGAT
FD979400 <-- ..................................................
FD948519 <-- ..................................................
EX901877 --> ..................................................
EV547001 --> AAGTGTGTTTGTGTTCTAAAGTAACAATAAGCTATAACCATTTGACTGAT
FD565605 --> AAGTGTGTTTGTGTTCTAGAGTAACAATAAGCTATAACCATTTGACTGAT
FD936921 --> AAGTGTGTTTGTGTTCTAAAGTAACAATAAGCTATAACCATTTGACTGAT
FD944290 --> AAGTGTGTTTGTGTTCTAGAGTAACAATAAGCTATAACCATTTGACTGAT
FD975441 --> AAGTGTGTTTGTGTTCTAGAGTAACAATAAGCTATAACCATTTGACTGAT
251 - 301
UN20012 --> GCCTCCTCCAAATGTCTCCCACTCACTCATCATCACCTCCTTCCTCCGCG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW724228 <-- GC-TCCTCCAAACGTCTCCCACTCACTCATCATCACCTCCTTCCTCCGCG
EV551999 <-- GCCTCCTCCAAATGTCTCCCACTCACTCATCATCACCTCCTTCCTCCGCG
FD979400 <-- ......................................tCTTCCTCCGCG
FD948519 <-- ..................................................
EX901877 --> ..................................................
EV547001 --> GCCTCCTCCAAATGTCTCCCACTCACTCATCATCACCTCCTTCCTCCGCG
FD565605 --> GCCTCCTCCAAATGTCTCCCACTCACTCATCATCACCTCCTTCCTCCGCG
FD936921 --> GCCTCCTCCAAATGTCTCCCACTCACTCATCATCACCTCCTTCCTCCGCG
FD944290 --> GCCTCCTCCAAATGTCTCCCACTCACTCATCATCACCTCCTTCCTCCGCG
FD975441 --> GCCTCCTCCAAATGTCTCCCACTCACTCATCATCACCTCCTTCCTCCGCG
301 - 351
UN20012 --> TTGTCCTGCTCTTCGACCTGGGTTTCTTGAAAACTGGATCTGCAAATTTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW724228 <-- TTGTCCTGCTCTTCGACCTGGGTTTCTTGAAAACTGGATCTGCAAATTTT
EV551999 <-- TTGTC-TGCTCTTCGACCTGGGTTTCTTGAAAACTGGATCTGCAAATTTT
FD979400 <-- T-GT-CTGCTCT-CGA-CTGGGTTTCT-GAAAGCTGGATCCGCAAATTTT
FD948519 <-- ..................................................
EX901877 --> ..................................................
EV547001 --> TTGTCCTGCTCTTCGACCTGGGTTTCTTGAAAACTGGATCTGCAAATTTT
FD565605 --> TTGTCCTGCTCT......................................
FD936921 --> TTGTCCTGCTCTTCGACCTGGGTTTCTTGAAAACTGGATCTGCAAATTTT
FD944290 --> TTGTCCTGCTCTTCGACCTGGGTTTCTTGAAAACTGGATCTGCAAATTTT
FD975441 --> TTGTCCTGCTCTTCGACCTGGGTTTCTTGAAAGCTGGATCCGCAAATTTT
351 - 401
UN20012 --> TGGAGTCCGGTTCATTTTCATCC-ATTCTATAGCCTTGCAGGGCGGTACG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW724228 <-- TGGAGTCCGGTTCATTTTCATCCCATTCTATAGCCTTGCAGGGCGGTACG
EV551999 <-- TGGAGTCCGGTTCATTTTCATCC-ATTCTATAGCCTTGCAGGGCGGTACG
FD979400 <-- -GGAGTCCGGTTCATTTTCATCC-ATTCTATAGCCTTGCAGGGCGGTACG
FD948519 <-- ...................ATCC-ATTCTATAGCCTTGCAGGGCGGTACG
EX901877 --> ..................................................
EV547001 --> TGGAGTCCGGTTCATTTTCATCC-ATTCTATAGCCTTGCAGGGCGGTACG
FD565605 --> ..................................................
FD936921 --> TGGAGTCCGGTTCATTTTCATCC-ATTCTATAGCCTTGCAGGGCGGTACG
FD944290 --> TGGAGTCCGGTTCATTTTCATCC-ATTCTATAGCCTTGCAGGGCGGTACG
FD975441 --> TGGAGTCCGGTTCATTTTCATCC-ATTCTATAGCCTTGCAGGGCGGTACG
401 - 451
UN20012 --> AGCAGTTGCTGCACATGCAGGGCTTTCAAAATCAACAAAACATAGAACAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW724228 <-- AGCAGTTGCTGCACATGCAGGGCTTTCAAAATCAACAAAACATAGAACAA
EV551999 <-- AGCAGTTGCTGCACATGCAGGGCTTTCAAAATCAACAAAACATAGAACAA
FD979400 <-- AGCAGTTGCTGCACATGCAGGGCTTTCAAAATCAGCAAAACATAGAACAA
FD948519 <-- AGCAGTTGCTGCACATGCAGGGCTTTCAAAATCAACAAAACATAGAACAA
EX901877 --> ..................................................
EV547001 --> AGCAGTTGCTGCACATGCAGGGCTTTCAAAATCAACAAAACATAAAACAA
FD565605 --> ..................................................
FD936921 --> AACAGTTGCTGCACATGCAGGGCTTTCAAAATCAACAAAACATAAAACAA
FD944290 --> AGCAGTTGCTGCACATGCAGGGCTTTCAAAATCAACAAAACATAGAACAA
FD975441 --> AGCAGTTGCTGCACATGCAGGGCTTTCAAAATCAGCAAAACATAGAACAA
451 - 501
UN20012 --> CAGGATCTCCATTCCTTTGCTTTGTATCTTTGGTCACAAGTCTCGCTTCT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW724228 <-- CAGGATCTCCATTCCTTTGCTTTGTATCTTTGGTCACAAGTCTCGCTTCT
EV551999 <-- CAGGATCTCCATTCCTTTGCTTTGTATCTTTGGTCACAAGTCTCGCTTCT
FD979400 <-- CAGGATCTCCATTCCTTTGCTTTGTATCTTTGGTCACAAGTCTCGCTTCT
FD948519 <-- CAGGATCTCCATTCCTTTGCTTTGTATCTTTGGTCACAAGTCTCGCTTCT
EX901877 --> ..................................................
EV547001 --> CAGGATCTCCATTCCTTTGCTTTGTATCTTTGGTCACAAGTCTCGCTTCT
FD565605 --> ..................................................
FD936921 --> CAGGATCTC.........................................
FD944290 --> CAGGATCTCCATTCCTTTGCTTTGTATCTTTGGTCACAAGTCTCGCTTCT
FD975441 --> CAGGATCTCCATTCCTTTGCTTTGTATCTTTGGTCACAAGTCTCGCTTCT
501 - 551
UN20012 --> TTATATCCCAAAAACGGTCGAAATATATGAGATACTTCCCTCCTGGAGCA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW724228 <-- TTATATCCCAAAAATGGTCGAAATATATGAGATACTTCCCTCCTGGAGCA
EV551999 <-- TTATATCCCAAAAACGGTCGAAATATATGAGATACTTCCCTCCTGGAGCA
FD979400 <-- TTATATCCCAAAAACGGTCGAAATATATGAGATACTTCCCTCCTGGAGCA
FD948519 <-- TTATATCCCAAAAATGGTCGAAATATATGAGATACTTCCCTCCTGGAGCA
EX901877 --> ..................................................
EV547001 --> TTATATCCCAAAAACGGTCGAAATATATGAGATACTTCCCTCCTGGAGCA
FD565605 --> ..................................................
FD936921 --> ..................................................
FD944290 --> TTATATCCCAAAAA....................................
FD975441 --> TTATATCCCAAAAACGGTCGAAATATATGAGATACTTCCCTCCTGGAGCA
551 - 601
UN20012 --> ATTAGAAGGAAGTCCTTCAACAAAAAGAGTGTTGGATGCATCTGGAGGCA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW724228 <-- ATTAGAAGGAAGCCCTTCAACAAATAGAGTGTTGGATGCATCTGGAGGCA
EV551999 <-- ATTAGAAGGAAGTCCTTCAACAAAAAGAGTGTTGGATGCATCTGGAGGCA
FD979400 <-- ATTAGAAGGAAGTCCTTCAACAAAAAGAGTGTTGGATGCATCTGGAGGCA
FD948519 <-- ATTAGAAGGAAGCCCTTCAACAAATAGAGTGTTGGATGCATCTGGAGGCA
EX901877 --> ..................................................
EV547001 --> ATTAGAAGGAAGTCCTTCAAC.............................
FD565605 --> ..................................................
FD936921 --> ..................................................
FD944290 --> ..................................................
FD975441 --> ATTAGAAGGAAGTCCTTCAACAAAAAGAGTGTTGGATGCATCTGGAGGCA
601 - 651
UN20012 --> GACGAAGCAGTTCCCGTCCAGG--T-CTACCAACTAAATCTTGTTGACCA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW724228 <-- GACGAAGCAGTTCCCTTCCAGGCCTCCTACCAACTAAATCTTGTTGACCA
EV551999 <-- GACGAAGCAGTTCCCGTCCAGG--T-CTACCAACTAAATCTTGTTGACCA
FD979400 <-- GACGAAGCAGTTCCCGTCCAGG--T-CTACCAACTAAATCTTGTTGACCA
FD948519 <-- GACGAAGCAGTTCCCTTCCAGGCCTCCTACCAACTAAATCTTGTTGACCA
EX901877 --> ..................................................
EV547001 --> ..................................................
FD565605 --> ..................................................
FD936921 --> ..................................................
FD944290 --> ..................................................
FD975441 --> GACGAAGCAGTTCCCGTCCAGG--T-CTACCAACTAAATCTTGTTGACCA
651 - 701
UN20012 --> AACCCCAAATCTCGACCATTTGGAGGCCCAAAATCTGGATGCTGAACTCC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW724228 <-- AACCCCAAATCTCGACCATTTGGAGGCCCAAAATCTGGATGCGGAACTCC
EV551999 <-- AAGCCCAAATCTCGACCATTTGGAGGCCCAAAATCTGGATGCTGAACTCC
FD979400 <-- AAACCCAAATCTCGACCATTTGGAGGCCCAAAATCTGGATGCTGAACTCC
FD948519 <-- AACCCCAAATCTCGACCATTTGGAGGCCCAAAATCTGGATGCGGAACTCC
EX901877 --> ..................................................
EV547001 --> ..................................................
FD565605 --> ..................................................
FD936921 --> ..................................................
FD944290 --> ..................................................
FD975441 --> AAACCCAAATCTCGACCATTTGGAGGCCCAAAATCTGGATGCTGAACTCC
701 - 751
UN20012 --> ACCACGCCCAGACATAAGCTCACCCATGTCACCTCCTCTGCCGACACCAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW724228 <-- ACCACGCCCAGACATAAGCTCACCCATGTCACCTCCTCTGCCGACACCAT
EV551999 <-- ACCACGCCCAGACATAAGCTCACCCATGTCACCTCCTCTGCCGACACCAT
FD979400 <-- ACCACGCCCAGACATAAGCTCACCCATGTCACCTCCTCTGCCGACACCAT
FD948519 <-- ACCACGCCCAGACATAAGCTCACCCATGTCACCTCCTCTGCCGACACCAT
EX901877 --> ..................................................
EV547001 --> ..................................................
FD565605 --> ..................................................
FD936921 --> ..................................................
FD944290 --> ..................................................
FD975441 --> ACCACGCCCAGACATAA.................................
751 - 801
UN20012 --> GATACCGACCAGCTTCTTCAGATGGCCTAGAAGACGTTTGCGCACTCTGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW724228 <-- GATACCGACCAGCTTCTTCAGATGGCCTAGAAGACGTTTGCGCACTCTGA
EV551999 <-- GAAACCGACCAGATTCTTCAGATGGCCTAGAAGACGTTTGCGCACTCTGA
FD979400 <-- GAAACCGACCAGATTCTTCAGATGGCCTAGAAGACGTTTGCGCACTCTGA
FD948519 <-- GATACCGACCAGCTTCTTCAGATGGCCTAGAAGACGTTTGCGCACTCTGA
EX901877 --> ..................................................
EV547001 --> ..................................................
FD565605 --> ..................................................
FD936921 --> ..................................................
FD944290 --> ..................................................
FD975441 --> ..................................................
801 - 851
UN20012 --> AGGTAGCGATCATAAGCTGAGCCAATAGTTCTCGTATCTCTTACTGAATG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW724228 <-- AGGTAGCGATCATAAGCTGAGCCAATAGTTCTCGTATCTCTTACTGAATG
EV551999 <-- AGGTAGCGATCATAAGCTGAGCCAATAGTTCTCGTATCTCTTACTGAATG
FD979400 <-- AGGTAGCGATCATAAGCTGAGCCAATAGTTCTCGTATCTCTTACTGAATG
FD948519 <-- AGGTAGCGATCATAAGCTGAGCCAATAGTTCTCGTATCTCTTACTGAATG
EX901877 --> ..................................................
EV547001 --> ..................................................
FD565605 --> ..................................................
FD936921 --> ..................................................
FD944290 --> ..................................................
FD975441 --> ..................................................
851 - 901
UN20012 --> AAGGATACCTCTATCCTCATCCCGTGACACGTAATCATGTTCGAAGTCAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW724228 <-- AAGGATACCTCGATCCTCATCCCGTGACACGTAATCATGGTCGAAGTCAG
EV551999 <-- AAGGATACCTCTATCCTCATCCCGTGACACGTAATCATGTTCGAAGTCAG
FD979400 <-- AAGGATACCTCTATCCTCATCCCGTGACACGTAATCATGTTCGAAGTCAG
FD948519 <-- AAGGATAGCTCGATCCTCATCCCGTGACACGTAATCATGGTCGAAGTCAG
EX901877 --> ..................................................
EV547001 --> ..................................................
FD565605 --> ..................................................
FD936921 --> ..................................................
FD944290 --> ..................................................
FD975441 --> ..................................................
901 - 951
UN20012 --> AACGGTGACGTTTCAGAGGACCTCCGTGGGGGATCGACGACATCGGAGGC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW724228 <-- AACGGTGACGTTTCAGAGGACCTCCGTGGGGGATCGAC............
EV551999 <-- AACGGTGACGTTTCAGAGGACCTCCGTGGGGGATCGACGACATCGGAGGC
FD979400 <-- AACGGTGACGTTTCAGAGGACCTCCGTGGGGGATCGACGACATCGGAGGC
FD948519 <-- AACGGTGACGTTTCAGAGGACCTCCGTGGGGGATCGACAACATCGGAGGC
EX901877 --> ..................................................
EV547001 --> ..................................................
FD565605 --> ..................................................
FD936921 --> ..................................................
FD944290 --> ..................................................
FD975441 --> ..................................................
951 - 1001
UN20012 --> TGGTTCCAGTACCCATCTCCCATTGACGACGACTGAAACAATACTTTCTA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW724228 <-- ..................................................
EV551999 <-- TGGTTCCAGTACCCATCTCCCATTGACGACGACTGAAACAATACTTTCTA
FD979400 <-- TGGTTCCAGTACCCATCTCCCATTGACGACGACTGAAACAATACTTTCTA
FD948519 <-- TGGTTCCAGTACCCATCTCCCATTGACGACGACTGAAACAATACTTTCTA
EX901877 --> ..................................................
EV547001 --> ..................................................
FD565605 --> ..................................................
FD936921 --> ..................................................
FD944290 --> ..................................................
FD975441 --> ..................................................
1001 - 1051
UN20012 --> ATTTTCGCCCGATTTCCC
~~~~~~~~~~~~~~~~~~
EW724228 <-- ..................
EV551999 <-- ATTTTCGCCCGATTTCCC
FD979400 <-- ATTTTCGCCCccc.....
FD948519 <-- ATTTTCGCCCcc......
EX901877 --> ..................
EV547001 --> ..................
FD565605 --> ..................
FD936921 --> ..................
FD944290 --> ..................
FD975441 --> ..................
| 
