Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN20034

               1      -     51
UN20034        --> CAGCGTTGCACTTGCTGTTACAAATGATTCTCCCCACTAACGAACGACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569213       <-- ..................................................
EV570128       <-- ..................................................
EX764980       <-- ..................................................
EV538026       <-- ..................................................
EV567720       <-- ..................................................
FD559028       <-- ..................................................
EY901179       <-- ..................................................
EY932811       <-- ..................................................
EV572601       --> CAGCGTTGCACTTGCTGTTACAAATGATTCTCCCCACTAACGAACGACAG
EX898633       --> ..................................................
EY896548       --> ..................................................
EV573802       --> ..................................................
FD554807       --> ..................................................
FD547243       --> ..................................................
EY928445       --> ..................................................

               51     -    101
UN20034        --> CGGAAGTGTCTTTATTCGAGTCATCAAAATCTATCAAATAGTAATCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569213       <-- ..................................................
EV570128       <-- ..................................................
EX764980       <-- ..................................................
EV538026       <-- ..................................................
EV567720       <-- ..................................................
FD559028       <-- ..................................................
EY901179       <-- ..................................................
EY932811       <-- ..................................................
EV572601       --> CGGAAGTGTCTTTATTCGAGTCATCAAAATCTATCAAATAGTAATCAACA
EX898633       --> .............................................CAACA
EY896548       --> .................................................A
EV573802       --> ..................................................
FD554807       --> ..................................................
FD547243       --> ..................................................
EY928445       --> ..................................................

               101    -    151
UN20034        --> AAAAAATAAAGATCACATTTCATTAATATATATCCTTTCCAATCATCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569213       <-- ..AAAATAAAGATCACATTTCATTAATATATATCCTTTCCAATCATCTCG
EV570128       <-- ..AAAATAAAGATCACATTTCATTAATATATATCCTTTCCAATCATCTCG
EX764980       <-- ..................................................
EV538026       <-- ..................................................
EV567720       <-- ..................................................
FD559028       <-- ..................................................
EY901179       <-- ..................................................
EY932811       <-- ..................................................
EV572601       --> AAAAAATAAAGATCACATTTCATTAATATATATCCTTTCCAATCATCTAG
EX898633       --> AAAAAATAAAGATCACATTTCATTAATATATATCCTTTCCAATCATCTCG
EY896548       --> AAAAAATAAAGATCACATTTCATTAATATATATCCTTTCCAATCATCTCG
EV573802       --> ..AAAATAAAGATCACATTTCATTAATATATATCCTTTCCAATCATCTCG
FD554807       --> ..AAAATAAAGATCACATTTCATTAATATATATCCTTTCCAATCATCTCG
FD547243       --> ...AAATAAAGATCACATTTCATTAATATATATCCTTTCCAATCATCCCG
EY928445       --> ...................TCATTAATATATATCCTTTCCAATCATCTCG

               151    -    201
UN20034        --> AATATCCGTCCGTACATGTATAAAACCTAAAA-CATA--CACC-ATACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569213       <-- AATATCCGTCCGTACATGTATAAAACCTAAAAACATA--CACCCATACAC
EV570128       <-- AATATCCGTCCGTACATGTATAAAACCTAAAA-CATA--CACC-ATACAC
EX764980       <-- .........................caTAAAA-CATA--CACC-ATACAC
EV538026       <-- ..............................AA-CATA--CACC-ATACAC
EV567720       <-- ..................................................
FD559028       <-- ..................................................
EY901179       <-- ..................................................
EY932811       <-- ..................................................
EV572601       --> AATATCCGTCCGTACATGTATAAAACCTAAAA-CATA--CACC-ATACAC
EX898633       --> AATATCCGTCCGTACATGTATAAAACCTAAAA-CATA--CACC-ATACAC
EY896548       --> AATATCCGTCCGTACATGTATAAAACCTAAAA-CATATACACC-ATACAC
EV573802       --> AATATCCGTCCGTACATGTATAAAACCTAAAA-CATA--CACC-ATACAC
FD554807       --> AATATCCGTCCGTACATGTATAAAACCTAAAA-CATA--CACC-ATACAC
FD547243       --> AAAATCCGTCCGTACATGTATAAAACCTAAAA-CATA--CCCC-ATACAC
EY928445       --> AATATCCGTCCGTACATGTATAAAACCTAGAA-CATATACACC-ATACAC

               201    -    251
UN20034        --> GACGCTTTAGG-CATTATACGATGATATTAATCAA-TTATTACATCC-AA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569213       <-- GACGCTTTAGGGCATTATACGATGATATTAATCAAATTATTACATCCCAA
EV570128       <-- GACGCTTTAGG-CATTATACGATGATATTAATCAA-TTATTACATCC-AA
EX764980       <-- GACGCTTTAGG-CATTATACGATGATATTAATCAA-TTATTACATCC-AA
EV538026       <-- GACGCTTTAGG-CATTATACGATGATATTAATCAA-TTATTACATCC-AG
EV567720       <-- ..................................................
FD559028       <-- ..................................................
EY901179       <-- ..................................................
EY932811       <-- ..................................................
EV572601       --> GACGCTTTAGG-CATTATACGATGATATTAATCAA-TTATTACATCC-AA
EX898633       --> GACGCTCTAGG-CATTATACGATGATATTAATCAA-TTATTACATCC-AA
EY896548       --> GACGCTTTAGG-CATTATACGATGATATTAATCAA-TTATTACATCC-AG
EV573802       --> GACGCTTTAGG-CATTATACGATGATATTAATCAA-TTATTACATCC-AA
FD554807       --> GACGCTTTAGG-CATTATACGATGATATTAATCAA-TTATTACATCC-AA
FD547243       --> GACGCTTTAGG-CATTATACGATGATATTAATCAA-TTATTACATCC-AA
EY928445       --> GACGCTTTAGG-CATTATATGATGATATTAATCAA-TTATTACATCC-AG

               251    -    301
UN20034        --> ATCATTTAATCAGAAGTAATAATTCGACAATGGTGGGGGTTGGGGCGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569213       <-- ATCATTTAATCAGAAGTAATAATTCGACAAatgg................
EV570128       <-- ATCATTTAATCAGAAGTAATAATTCGACAATGGTGGGGGTTGGGGCGAAG
EX764980       <-- ATCATTTAATCAGAAGTAATAATTCGACAATGGTGGGGGTTGGGGCGAAG
EV538026       <-- ATCATTTAATCAGAAGTAATAATTCGACAACGGTGGGGGTTGGGGCGAAG
EV567720       <-- .........................GACAATGGTGGGGGTTGGGGCGAAG
FD559028       <-- ..................................................
EY901179       <-- ..................................................
EY932811       <-- ..................................................
EV572601       --> ATCATTTAATCAGAAGTAATAATTCGACAATGGTGGGGGTTGGGGCGAAG
EX898633       --> ATCATTTAATCAGAAGTAATAATTCGACAATGGTGGGGGTTGGGGCGAAG
EY896548       --> ATCATTTAATCAGAAGTAATAATTCGACAATGGTGGGGGTTGGGGCGAAG
EV573802       --> ATCATTTAATCAGAAGTAATAATTCGACAATGGTGGGGGTTGGGGCGAAG
FD554807       --> ATCATTTAATCAGAAGTAATAATTCGACAATGGTGGGGGTTGGGGCGAAG
FD547243       --> ATCATTTAATCAAAAGTAATAATTCGACAATGGGGGGGGTTGGGGCGAAG
EY928445       --> ATCATTTAATCAGAAGTAATAATTCGACAATGGTGGGGGTTGGGGCGAAG

               301    -    351
UN20034        --> TGTCTTCCTCGTTAAGCTTCACCTTAATACCAAACGTCTTAAAAATAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569213       <-- ..................................................
EV570128       <-- TGTCTTCCTCGTTAAGCTTCACCTTAATACCAAACGTCTTAAAAATAGTT
EX764980       <-- TGTCTTCCTCGTTAAGCTTCACCTTAATACCAAACGTCTTAAAAATAGTT
EV538026       <-- TGTCTTCCTCGTTAAGCTTCACCTTAATACCAAACGTCTTAAAAATAGTT
EV567720       <-- TGTCTTCCTCGTTAAGCTTCACTTTAATACCAAACGTCTTAAAAATAGTT
FD559028       <-- .....TCCTCGTTAAGCTTCAC-TTAATACCAAACGTCTTAAAAATAGTT
EY901179       <-- ..........................ATACAAAACGTCTTAAAAATAGTT
EY932811       <-- ..........................................AAATAGTT
EV572601       --> TGTCTTCCTCGTTAAGCTTCACCTTAATACCAAACGTCTTAAAAATAGTT
EX898633       --> TGTCTTCCTCGTTAAGCTTCACCTTAATACCAAACGTCTTAAAAATAGTT
EY896548       --> TGTCTTCCTCGTTAAGCTTCACCTTAATACAAAACGTCTTAAAAATAGTT
EV573802       --> TGTCTTCCTCGTTAAGCTTCACCTTAATACCAAACGTCTTAAAAATAGTT
FD554807       --> TGTCTTCCTCGTTAAGCTTCACCTTAATACCAAACGTCTTAAAAATAGTT
FD547243       --> TGTCTTCCTCGTTAAGCTTCACCTTAATACCAAACGTCTTAAAAATAGTT
EY928445       --> TGTCTTCCTCGTTAAGCTTCACCTTAATACAAAACGTCTTAAAAATAGTT

               351    -    401
UN20034        --> TTCAAACCATTGAACACATCAAACGTATTACTGCTTAGATTCTTCCCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569213       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV570128       <-- TTCAAACCATTGAACACATCAAACGTATTACTGCTTAGATTCTTCCCAAC  Raphanus raphanistrum subsp. landra
EX764980       <-- TTCAAACCATTGAACACATCAAACGTATTACTGCTTAGATTCTTCCCAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV538026       <-- TTCAAACCATTGAACACATCAAACGTATTACTGCTTAGATTCTTCCCAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV567720       <-- TTCAAACCATTGAACACATCAAACGTATTACTGCTTAGATTCTTCCCAAC  Raphanus raphanistrum subsp. landra
FD559028       <-- TTCAAACCATTGAACACATCAAACGTATTACTGCTTAGATTCTTCCCAAC  Raphanus raphanistrum subsp. landra
EY901179       <-- TTCAAACCATTGAAGACATCAAACGTATTACTGCTTAGATTCTTCCCAAC  Raphanus raphanistrum subsp. maritimus
EY932811       <-- T-CAAACCATTGAAGACATCAAACGTATTACTGCTTAGATTCTTCCCAAC  Raphanus sativus var. oleiformis
EV572601       --> TTCAAACCATTGAACACATCAAACGTATTACTGCTTAGATTCTTCCCAAC  Raphanus raphanistrum subsp. landra
EX898633       --> TTCAAACCATTGAACACATCAAACGTATTACTGCTTAGATTCTTCCCAAC  Raphanus sativus cv Early Scarlet Globe
EY896548       --> TTCAAACCATTGAAGACATCAAACGTATTACTGCTTAAATTCTTCCCAAC  Raphanus raphanistrum subsp. maritimus
EV573802       --> TTCAAACCATTGAACACATCAAACGTATTACTGCTTAGATTCTTCCCAAC  Raphanus raphanistrum subsp. landra
FD554807       --> TTCAAACCATTGAACACATCAAACGTATTACTGCTTAGATTCTTCCCAAC  Raphanus raphanistrum subsp. landra
FD547243       --> TTCAAACCATTGAACACATCAAACGTATTACTGCTTAAATTCTTCCCAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928445       --> TTCAAACCATTGAAGACATCAAACGTATTACTGCTTAGATTCTTCCCAAC  Raphanus sativus var. oleiformis

               401    -    451
UN20034        --> ACTGATCCCAGTCTCCACTTCCTTCAACAGATTCTTATCATCAATATCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569213       <-- ..................................................
EV570128       <-- ACTGATCCCAGTCTCCACTTCCTTCAACAGATTATTATCATCAATATCAT
EX764980       <-- ACTGATCCCAGTCTCCACTTCCTTCAACAGATTCTTATCATCAATATCAT
EV538026       <-- ACTGATCCCAGTCTCCACTTCCTTCAACAGATTCTTATCATCAATATCAT
EV567720       <-- ACTGATCCCAGTCTCCACTTCCTTCAACAGATTCTTATCATCAATATCAT
FD559028       <-- ACTGATCCCAGTCTCCACTTCCTTCAACAGATTCTTATCATCAATATCAT
EY901179       <-- ACTGATCCCAGTCTCCACTTCCTTCAACAGATTCTTATCATCAATATCAT
EY932811       <-- ACTGATCCCAGTCTCCACTTCTTTCAACAGATTCTTATCATCAATATCAT
EV572601       --> ACTGATCCCAGTCTCCACTTCCTTCAACAGATTCTTATCATCAATATCAT
EX898633       --> ACTGATCCCAGTCTCCACTTCCTTCAACAGATTCTTATCATCAATATCAT
EY896548       --> ACTGATCCCAGTCTCCACTTCCTTCAACAGATTCTTATCATCAATATCAT
EV573802       --> ACTGATCCCAGTCTCCACTTCCTTCAACAGATTATTATCATCAATATCAT
FD554807       --> ACTGATCCCAGTCTCCACTTCCTTCAACAGATTCTTATCATCAATATCAT
FD547243       --> ACTGATCCCAGTCTCCACTTCCTTCAACAAATTCTTATCATCAATATCAT
EY928445       --> ACTGATCCCAGTCTCCACTTCCTTCAACAGATTCTTATCATCAATATCAT

               451    -    501
UN20034        --> CCAAACAAGTCCAGTGATACCCCATGATCGACATCAACGTCTTCTTACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569213       <-- ..................................................
EV570128       <-- CCAAACAAGTCCAGTGATACCCCATGATCGACATCAACGTCTTCTTACAC
EX764980       <-- CCAAACAAGTCCAGTGATACCCCATGATCGACATCAACGTCTTCTTACAC
EV538026       <-- CCAAACAAGTCCAGTGATACCCCATGATCGACATCAACGTCTTCTTACAC
EV567720       <-- CCAAACAAGTCCAGTGATACCCCATGATCGACATCAACGTCTTCTTACAC
FD559028       <-- CCAAACAAGTCCAGTGATACCCCATGATCGACATCAACGTCTTCTTACAC
EY901179       <-- CCAAACAAGTCCAGTGATACCCCATGATCGACATCAACGTCTTCTTACAC
EY932811       <-- CCAAACAAGTCCAGTGATACCCCATGATCGACATCAACGTCTTCTTACAC
EV572601       --> CCAAACAAGTCCAGTGATACCCCATGATCGACATCAACGTCTTCTTACAC
EX898633       --> CCAAACAAGTCCAGTGATACCCCATGATCGACATCAACGTCTTCTTACAC
EY896548       --> CCAAACAAGTCCAGTGATACCCCATGATCGACATCAACGTCTTCTTACAC
EV573802       --> CCAAACAAGTCCAGTGATACCCCATGATCGACATCAACGTCTTCTTACAC
FD554807       --> CCAAACAAGTCCAGTGATACCCCATGATCGACATCAACGTCTTCTTACAC
FD547243       --> CCAAACAAGTCCAGTGATACCCCATGATCGACATCAACGTCTTCTTACAC
EY928445       --> CCAAACAAGTCCAGTGATACCCCATGATCGACATCAACGTCTTCTTACAC

               501    -    551
UN20034        --> GTGAAATAGTTATGAGCCAACGTCGTTACATCTTTCCCCGTAGCGTTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569213       <-- ..................................................
EV570128       <-- GTGAAATAGTTATGAGCCAACGTCGTTACATCTTTCCCCGTAGCGTTCCA
EX764980       <-- GTGAAATAGTTATGAGCCAACGTCGTTACATCTTTCCCCGTAGCGTTCCA
EV538026       <-- GTGAAATAGTTATGAGCCAACGTCGTTACATCTTTCCCCGTAGCGTTCCA
EV567720       <-- GTGAAATAGTTATGAGCCAACGTCGTTACATCTTTCCCCGTAGCGTTCCA
FD559028       <-- GTGAAATAGTTATGAGCCAACGTCGTTACATCTTTCCCCGTAGCGTTCCA
EY901179       <-- GTGAAATAGTTATGAGCCAACGTCGTTACATCTTTCCCCGTAGCGTTCCA
EY932811       <-- GTGAAATAGTTATGAGCCAACGTCGTTACATCTTTCCCCGTAGCGTTCCA
EV572601       --> GTGAAATAGTTATGAGCCAACGTCGTTACATCTTTCCCCGTAGCGTTCCA
EX898633       --> GTGAAATAGTTATGAGCCAACGTCGTTACATCTTTCCCCGTAGCGTTCCA
EY896548       --> GTGAAATAGTTATGAGCCAACGTCGTTACATCTTTCCCCGTAGCGTTCCA
EV573802       --> GTGAAATAGTTATGAGCCAACGTCGTTACATCTTTCCCCGTAGCGTTCCA
FD554807       --> GTGAAATAGTTATGAGCCAACGTCGTTACATCTTTCCCCGTAGCGTTCCA
FD547243       --> GTGAAATAGTT.......................................
EY928445       --> GTGAAATAGTTATGAGCCAACGTCGTTACATCTTTCCCCGTAGCGTTCCA

               551    -    601
UN20034        --> AAACTCGGCGAAATCTTCCAACGCGTAGTTCAGGTTTTTCTGGCAGCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569213       <-- ..................................................
EV570128       <-- AAACTCGGCGAAATCTTCCAACGCGTAGTTCAGGTTTTTCTGGCAGCTGT
EX764980       <-- AAACTCGGCGAAATCTTCCAACGCGTAGTTCAGGTTTTTCTGGCAGCTGT
EV538026       <-- AAAATCGGCGAAATCTTCTAACGCGTAGTTCAGATTTTTCTGGCAGCTGT
EV567720       <-- AAACTCGGCGAAATCTTCCAACGCGTAGTTCAGGTTTTTCTGGCAGCTGT
FD559028       <-- AAACTCGGCGAAATCTTCCAACGCGTAGTTCAGGTTTTTCTGGCAGCTGT
EY901179       <-- AAACTCGGCGAAATCTTCCAACGCGTAGTTCAGGTTTTTCTGGCAGCTGT
EY932811       <-- AAACTCGGCGAAATCTTCCAACGCGTAGTTCAGGTTTTTCTGGCAGCTGT
EV572601       --> AAACTCGGCGAAATCTTCCAACGCGTAGTTCAGGTTTTTCTGGCAGCTGT
EX898633       --> AAACTCGGCGAAATCTTCCAACGCGTAGTTCAGGTTTTTCTGGCAGCTGT
EY896548       --> AAACTCGGCGAAATCTTCCAACGCGTAGTTCAGGTT..............
EV573802       --> AAACTCGGCGAAATCTTCCAACGCGTAGTTCAGGTTTTTCTGGCAGCTGT
FD554807       --> AAACTCGGCGAAATCTTCCAACGCGTAGTTCAGGTTTTTCTGGCAGCTGT
FD547243       --> ..................................................
EY928445       --> AAACTCGGCGAAATCTTCCAACGCGTAGTTCAGGTTTTTCTGGCAGCTGT

               601    -    651
UN20034        --> AGATCGCTGCAGCTGCGGTTGCGTTCGATTTGTGTTTTGGTTTGATCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569213       <-- ..................................................
EV570128       <-- AGATCGCTGCAGCTGCGGTTGCGTTCGATTTGTGTTTTGGTTTGATCTCG
EX764980       <-- AGATCGCTGCAGCTGCGGTTGCGTTCGATTTGTGTTTTGGTTTAATCTCG
EV538026       <-- AGATCGCTGCAGCTGCGGTTGCGTTCGATTTGTGTTTTGGTTTGATCTCG
EV567720       <-- AGATCGCTGCAGCTGCGGTTGCGTTCGATTTGTGTTTTGGTTTGATCTCG
FD559028       <-- AGATCGCTGCAGCTGCGGTTGCGCTCGATTTGTGTTTTGGTTTGATCTCG
EY901179       <-- AGATCGCTGCAGCTGCGGTTGCGTTCGATTTGTGTTTTGGTTTGATCTCG
EY932811       <-- AGATCGCTGCAGCTGCGGTTGCGTTCGATTTGTGTTTTGGTTTGATCTCG
EV572601       --> AGATCGCTGCAGCTGCGGTTGCGTTCGATTTGTGTTTTGGTTTGATCTCG
EX898633       --> AGATCGCTGCAGCTGCGGTTGCGTTCGATTTGTGTTTTGGTTTGATCTCG
EY896548       --> ..................................................
EV573802       --> AGATCGCTGCAGCTGCGGTTGCGTTCGATTTGTGTTTTGGTTTGATCTCG
FD554807       --> AGATCGCTGCAGCTGCGGTTGCGCTCGATTTGTGTTTTGGTTTGATCTCG
FD547243       --> ..................................................
EY928445       --> AGATCGCTGCAGCTGCGGTTGCGTTCGATTTGTGTTTTGGTTTGATCTCG

               651    -    701
UN20034        --> GAGAGGAAAGTTACACTTCTTTTCACGGAAGATTCAGTCGCAGCCGCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569213       <-- ..................................................
EV570128       <-- GAGAGGAAAGTTACACTTCTTTACACGGAAGATTCAGTCGCAGCCGCTAA
EX764980       <-- GAGAGGAAAGTTACACTTCTTTTCACGGAAGATTCAGTCGCAGCCGCTAA
EV538026       <-- GAGAGGAAAGTTACACTTCTTTTCACGGAAGATTTAGTAGCAGCCGCTAA
EV567720       <-- GAGAGGAAAGTTACACTTCTTTTCACGGAAGATTCAGTCGCAGCCGCTAA
FD559028       <-- GAGAGGAAAGTTACACTTCTTTTCACGGAAGATTCAGTCGCAGCCGCTAA
EY901179       <-- GAGAGGAAAGTTACACTTCTTTTCACGGAAGATTCAGTCGCAGCCGCTAA
EY932811       <-- GAGAGGAAAGTTACACTTCTTTTCACGGAAGATTCAGTCGCAGCCGCTAA
EV572601       --> GAGAGGAAAGTTACACTTCTTTTCACGGAAGATTCAGTCGCAGCCGCTAA
EX898633       --> GAGAGGAAAGTTACACTTCTTTTCACGGAAGATTCAGTCGCAGCCGCTAA
EY896548       --> ..................................................
EV573802       --> GAGAGGAAAGTTACACTTCTTTACACGGAAGATTCAGTCGCAGCCGCTAA
FD554807       --> GAGAGGAAAGTTACACTTCTTTTCACGGAAGATTCAGTCGCAGCCGCTAA
FD547243       --> ..................................................
EY928445       --> GAGAGGAAAGTTACACTTCTTTTCACGGAAGATTCAGTCGCAGCCGCTAA

               701    -    751
UN20034        --> CGCTCGGATCAATTCGATGGGGTCATTTGTAGGAACGTGTTTAAGGGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569213       <-- ..................................................
EV570128       <-- CGCTCGGATCAATTCGATGGGGTCATTTGTAGGAACGTGTTTAAGGGTTT
EX764980       <-- CGCTCGGATCAATTCGATGGGGTCATTTGTAGGAACGTGTTTAAGGGTTT
EV538026       <-- CACTCGGATCAATTCGATGGGGTCATTGGTAGGAACGTGTTTAAGGGTTT
EV567720       <-- CGCTCGGATCAATTCGATGGGGTCATTTGTAGGAACGTGTTTAAGGGTTT
FD559028       <-- CGCTCGGATCAATTCGATGGGGTCATTTGTAGGAACGTGTTTAAGGGTTT
EY901179       <-- CGCTCGGATCAATTCGATGGGGTCATTTGTAGGAACGTGTTTAAGGGTTT
EY932811       <-- CGCTCGGATCAATTCGATGGGGTCATTTGTAGGAACGTGTTTAAGGGTTT
EV572601       --> CGCTCGGATCAA......................................
EX898633       --> CGCTCGGATCAATTCGATGGGGTCATTGGTAGGAACGTGTTTAAGGGTTT
EY896548       --> ..................................................
EV573802       --> CGCTCGGATCAATTCGATGGGGTCATTTGTAGGAACGTGTTTAAGGGTTT
FD554807       --> CGCTCGGA..........................................
FD547243       --> ..................................................
EY928445       --> CGCTCGGATCAATTCGATGGGGTCATTTGTAGGAACGTGTT.........

               751    -    801
UN20034        --> TGCAGCATAGACTTGTGTTTGTTATGACGACGGTGCATACTCCCGCGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569213       <-- ..................................................
EV570128       <-- TGCAGCATAGACTTGTGTTTGTTATGACGACGGTGCATACTCCCGCGACT
EX764980       <-- TGCAGCATAGACTTGTGTTTGTTATGACGACGGTGC..............
EV538026       <-- TGCAGCATAGACTTGTGTTTGTTACGACGACGGTGCATACTCCCGCGACT
EV567720       <-- TGCGGCATAGACTTGTGTTTGTTATGACGACGGTGCATACTCCCGCGACT
FD559028       <-- TGCAGCATAGACTTGTGTTTGTTATGACGACGGTGCATACTCCCGCGACT
EY901179       <-- TGCAGCATAGACTTGTGTTTGTTATGACGACGATGCATACTCCCGCGACT
EY932811       <-- TGCAGCATAGACTTGTGTTTGTTATGACGACGGTGCATACTCCCGCGACT
EV572601       --> ..................................................
EX898633       --> TGCAGCATAGACTCGTGTTTGTTACGACGACGGTGCATATTCCCGCGAAT
EY896548       --> ..................................................
EV573802       --> TGCAGCATAGACTTGTGTTTGTTATGACGACGGTGCATACTCCCGCGACT
FD554807       --> ..................................................
FD547243       --> ..................................................
EY928445       --> ..................................................

               801    -    851
UN20034        --> GCTTTTGCATGCGGTGTGAAAAGGTAGTTCCTGCGTTTGGCTTTGGGTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569213       <-- ..................................................
EV570128       <-- GC................................................
EX764980       <-- ..................................................
EV538026       <-- GCTTTTGCATGCGGTGTGAAAAGGTAGTTCCTGCGTTTGGCTTTGGGTGC
EV567720       <-- GCTTTTGCATGCGGTGTGAAAAGGTAGTTCCTGCGTTTGGCTTTGGGTGC
FD559028       <-- GCTTTTGCATGCGGTGTGAAAAGGTAGTTCCTGCGTTTGGCTTTGGGTGC
EY901179       <-- GCTTTTGCATGCGGTGTGAAAAGGTAGTTCCTGCGTTTGGCTTTGGGTGC
EY932811       <-- GCTTTTGCATGCGGTGTGAAAAGGTAGTTCCTGCGTTTGGCTTTGGGTGC
EV572601       --> ..................................................
EX898633       --> GCTTTTGCATGCGGGGTGAAAAGGTAGTTCCTGCGTTTGGCTTTGGGTGC
EY896548       --> ..................................................
EV573802       --> GC................................................
FD554807       --> ..................................................
FD547243       --> ..................................................
EY928445       --> ..................................................

               851    -    901
UN20034        --> AGCGGTTGCAGTTGCTGTGAGGGTTAAGAGGAGAAAGGCTAGTTTGATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569213       <-- ..................................................
EV570128       <-- ..................................................
EX764980       <-- ..................................................
EV538026       <-- AGCGGTTGCAGTTGCTGTGAGGGTTAAGAGGAGAAAGGCTAGTTTGATTG
EV567720       <-- AGCGGTTGCAGTTGCTGTGAGGGTTAAGAGGAGAAAGGCTAGTTTGATTG
FD559028       <-- AGCGGTTGCAGTTGCTGTGAGGGTTAAGAGGAGAAAGGCTAGTTTGATTG
EY901179       <-- AGCGGTTGCAGTTGCTGTGAGGGTTAAGAGGAGAAAGGCTAGTTTGATTG
EY932811       <-- AGCGGTTGCAGTTGCTGTGAGGGTTAAGAGGAGAAAGGCTAGTTTGATTG
EV572601       --> ..................................................
EX898633       --> AGCGGTTGCAGTTGCTGTGAGGGT-AAGAGGAGA................
EY896548       --> ..................................................
EV573802       --> ..................................................
FD554807       --> ..................................................
FD547243       --> ..................................................
EY928445       --> ..................................................

               901    -    951
UN20034        --> GAGTGATCATGATCGTGTGTTCTCCTATATGGACGGAGACAAAAAAAA-G
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569213       <-- ..................................................
EV570128       <-- ..................................................
EX764980       <-- ..................................................
EV538026       <-- GAGTGATCATGATCGTGTGTTCTCCTA--TGGACGGAGACCAAAAAA--G
EV567720       <-- GAGTGATCATGATCGTGTGTTCTCCTATATGGACGGAGACAAAAAAAA-G
FD559028       <-- GAGTGATCATGATCGTGTGTTCTCCTATATGGACGGAGACAAAAAAAAAG
EY901179       <-- GAGTGATCATGATCGTGTGTTCTCCTATATGGACGGAGACAAAAAAAA-G
EY932811       <-- GAGTGATCATGATCGTGTGTTCTCCTATATGGACGGAGACAAAAAAAA-G
EV572601       --> ..................................................
EX898633       --> ..................................................
EY896548       --> ..................................................
EV573802       --> ..................................................
FD554807       --> ..................................................
FD547243       --> ..................................................
EY928445       --> ..................................................

               951    -   1001
UN20034        --> GATCGGAAAGGAACGGATCAGGAGGAAGGAGAGAGAGCTTCCGATACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569213       <-- .................................................
EV570128       <-- .................................................
EX764980       <-- .................................................
EV538026       <-- GATCGGAAAGGAACGGGTCCGGAGGAAGGAGAGAGAGCTTCCGATACCC
EV567720       <-- GATCGGAAAGGAACGGATCAGGAGGAAGGAGAGGGAGCTTCCGATcc..
FD559028       <-- GATCGGAAAGGAACGGATCAGGAGGAAGGAGAGAGAGCTTCCGATACCC
EY901179       <-- GATCGGAAAGGAACGGATCAGGAGGAAGGAGAGAGAGCTTCCGATACCC
EY932811       <-- GATCGGAAAGGAACGGATCAGGAGGAAGGAGAGAGAGCTTCCGATcc..
EV572601       --> .................................................
EX898633       --> .................................................
EY896548       --> .................................................
EV573802       --> .................................................
FD554807       --> .................................................
FD547243       --> .................................................
EY928445       --> .................................................