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Alignment for radish unigene UN20045

               1      -     51
UN20045        --> GGGAGCTAGCTTTCGAGTGAAACTTGAAGAAAAACAGATTCGTCATTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- ..................................................
FD950309       <-- ..................................................
FD565001       <-- ..................................................
FD942130       <-- ..................................................
EY937928       <-- ..................................................
FD945920       --> GGGAGCTAGCTTTCGAGTGAAACTTGAAGAAAAACAGATTCGTCATTTCT
FD572404       --> .GGAGCTAGCTTTCGAGTGAAACTTGAAGAAAAACAGATTCGTCATTTCT
FD560629       --> ......ggagcTTCGAGTGAAACTTGAAGAAAAACAGATTCGTCATTTCT
FD953970       --> ................GTGAAACTTGAAGAAAAACAGATTCGTCATTTCT
FY454615       --> ..................................................
EY934166       --> ..................................................

               51     -    101
UN20045        --> TACTGTTCGGTCTGAAAGCTACCTACCTTCCTGTTCCCTGGAGATGTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- ..................................................
FD950309       <-- ..................................................
FD565001       <-- ..................................................
FD942130       <-- ..................................................
EY937928       <-- ..................................................
FD945920       --> TACTGTTCGGTCTGAAAGCAACCTACCTTCCTGTTCCCTGGAGATGTCTG
FD572404       --> TACTGTTCGGTCTGAAAGCAACCTACCTTCCTGTTCCCTGGAGATGTCTG
FD560629       --> TACTGTTCGGTCTGAAAGCTACCTACCTTCCTGTTCCCTGGAGATGTCTG
FD953970       --> TACTGTTCGGTCTGAAAGCTACCTACCTTCCTGTTCCCTGGAGATGTCTG
FY454615       --> ..................................................
EY934166       --> ..................................................

               101    -    151
UN20045        --> TCTTTGATGATGATTCGTTCGTTATACTCGGAGATGATGCATCTGAGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- ..................................................
FD950309       <-- ..................................................
FD565001       <-- ..................................................
FD942130       <-- ..................................................
EY937928       <-- ..................................................
FD945920       --> TCTTTGATGATGATTCGTTCGTTATACTCGGAGATGATGCATCTGAGTCT
FD572404       --> TCTTTGATGATGATTCGTTCGTTATACTCGGAGATGATGCATCTGAGTCT
FD560629       --> TCTTTGATGATGATTCGTTCGTTATACTCGGAGATGATGCATCTGAGTCT
FD953970       --> TCTTTGATGATGATTCGTTCGTTATACTCGGAGATGATGCATCTGAGTCT
FY454615       --> ..................................................
EY934166       --> ..................................................

               151    -    201
UN20045        --> GTTCCTCAGGTCTCAGCCCAAGTAGATGATTCGATCAATGATGACGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- ........GGTCTCAGCCCAAGTAGATGATTCGATCAATGATGACGTTTT
FD950309       <-- ..................................................
FD565001       <-- ..................................................
FD942130       <-- ..................................................
EY937928       <-- ..................................................
FD945920       --> GTTCCTCAGGTCTCAGCCCAAGTAGATGATTCGATCAATGATGACGTTTT
FD572404       --> GTTCCTCAGGTCTCAGCCCAAGTAGATGATTCGATCAATGATGACGTTTT
FD560629       --> GTTCCTCAGGTCTCAGCCCAAGTAGATGATTCGATCGATGATGACGTTTT
FD953970       --> GTTCCTCAGGTCTCAGCCCAAGTAGATGATTCGATCGATGATGACGTTTT
FY454615       --> ..................................................
EY934166       --> ..................................................

               201    -    251
UN20045        --> CGCGGCGCCGTCTTCAGACTACGGCGGTTACTCTAACGGAGACGACGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- CGCGGCGCCGTCTTCAGACTACGGCGGTTACTCTAACGGAGACGACGGTC
FD950309       <-- ............TTCAGACTACGGCGGTTACTCTAACGGAGACGACGGTC
FD565001       <-- ..................................................
FD942130       <-- ..................................................
EY937928       <-- ..................................................
FD945920       --> CGCGGCGCCGTCTTCAGACTACGGCGGTTACTCTAACGGAGACGACGGTC
FD572404       --> CGCGGCGCCGTCTTCAGACTACGGCGGTTACTCTAACGGAGACGACGGTC
FD560629       --> CGCGGCGCCGTCTTCAGACTACGGCGGTTACTCTAACGGAGACGACGGTC
FD953970       --> CGCGGCGCCGTCTTCAGACTACGGCGGTTACTCTAACGGAGACGACGGTC
FY454615       --> ..................................................
EY934166       --> ..................................................

               251    -    301
UN20045        --> CTATCTTGCCTCCTCCTTCGGAGATGGAGTCTGATGAGGGAGCTGCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- CTATCTTGCCTCCTCCTTCGGAGATGGAGACTGATGAGGGAGCTGCTCTC
FD950309       <-- CTATCTTGCCTCCTCCTTCGGAGATGGAGTCTGATG-GGGAGCTGCTCTC
FD565001       <-- ..................................................
FD942130       <-- ..................................................
EY937928       <-- ..................................................
FD945920       --> CTATCTTGCCTCCTCCTTCGGAGATGGAGACTGATGAGGGAGCTGCTCTC
FD572404       --> CTATCTTGCCTCCTCCTTCGGAGATGGAGACTGATGAGGGAGCTGCTCTC
FD560629       --> CTATCTTGCCTCCTCCTTCGGAGATGGAGTCTGATGAGGGAGCTGCTCTC
FD953970       --> CTATCTTGCCTCCTCCTTCGGAGATGGAGTCTGATG-GGGAGCTGCTCTC
FY454615       --> ..................................................
EY934166       --> ..................................................

               301    -    351
UN20045        --> AGAGAATGGAGAAGACAGAATGCGATTCAACTTGAGGAGAAGGAGAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- AGAGAATGGAGAAGACAGAATGCGATTCAACTTGAGGAGAAGGAGAAGAG
FD950309       <-- AGAGAATGGAGAAGACAGAACGCGATTCAACTTGAGGAGAAGGAGAAGAG
FD565001       <-- AGAGAATGGAGAAGCCAGAATGCGATTCAACTTGAGGAGAAGGAGAAGAG
FD942130       <-- AGAGAATGGAGAAGACAGAATGCGATTCAACTTGAGGAGAAGGAGAAGAG
EY937928       <-- ..................................................
FD945920       --> AGAGAATGGAGAAGACAGAATGCGATTCAACTTGAGGAGAAGGAGAAGAG
FD572404       --> AGAGAATGGAGAAGACAGAATGCGATTCAACTTGAGGAGAAGGAGAAGAG
FD560629       --> AGAGAATGGAGAAGCCAGAATGCGATTCAACTTGAGGAGAAGGAGAAGAG
FD953970       --> AGAGAATGGAGAAGACAGAACGCGATTCAACTTGAGGAGAAGGAGAAGAG
FY454615       --> ..................................................
EY934166       --> ..................................................

               351    -    401
UN20045        --> AGAAAAGGAGTTGCGGAACCAAATAATCGAGGAAGCTGATCAGTTCAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- AGAAAAGGAGTTGCGGAACCAAATAATCGAGGAAGCTGATCAGTTCAAAG
FD950309       <-- AGAAAAGGAGTTGCGGAACCAAATAATCGAGGAAGCTGATCAGTTCAAAG
FD565001       <-- AGAAAAGGAGTTGCGGAACCAAATAATCGAGGAAGCTGATCAGTTCAAAG
FD942130       <-- AGAAAAGGAGTTGCGGAACCAAATAATCGAGGAAGCTGATCAGTTCAAAG
EY937928       <-- ..................................................
FD945920       --> AGAAAAGGAGTTGCGGAACCAAATAATCGAGGAAGCTGATCAGTTCAAAG
FD572404       --> AGAAAAGGAGTTGCGGAACCAAATAATCGAGGAAGCTGATCAGTTCAAAG
FD560629       --> AGAAAAGGAGTTGCGGAACCAAATAATCGAGGAAGCTGATCAGTTCAAAG
FD953970       --> AGAAAAGGAGTTGCGGAACCAAATAATCGAGGAAGCTGATCAGTTCAAAG
FY454615       --> ..................................................
EY934166       --> ..................................................

               401    -    451
UN20045        --> AGGAGTTCCATAAGAAGAGGGAGTTGGCTTGTGAAAACAACAAAGCAGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- AGGAGTTCCATAAGAAGAGGGAGTTGGCTTGTGAAAACAACAAAGCAGCG
FD950309       <-- AGGAGTTCCATAAGAAGAGGGAGTTGGCTTGTGAAAACAACAAAGCAGCG
FD565001       <-- AGGAGTTCCATAAGAAGAGGGAGTTGGCTTGTGAAAACAACAAAGCAGCG
FD942130       <-- AGGAGTTCCATAAGAAGAGGGAGTTGGCTTGTGAAAACAACAAAGCAGCT
EY937928       <-- ..................................................
FD945920       --> AGGAGTTCCATAAGAAGAGGGAGTTGGCTTGTGAAAACAACAAAGCAGCT
FD572404       --> AGGAGTTCCATAAGAAGAGGGAGTTGGCTTGTGAAAACAACAAAGCAGCG
FD560629       --> AGGAGTTCCATAAGAAGAGGGAGTTGGCTTGTGAAAACAACAAAGCAGCG
FD953970       --> AGGAGTTCCATAAGAAGAGGGAGTTGGCTTGTGAAAACAACAAAGCAGCG
FY454615       --> ..................................................
EY934166       --> ..................................................

               451    -    501
UN20045        --> AACAGGGAGAAACAAAAGCTGTATGTGGAGACCCAAGAGAAGTTTTACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- AACAGGGAGAAACAAAAGCTGTATGTGGAGGCCCAAGAGAAGTTTTACGC
FD950309       <-- AACAGGGAGAAACAAAAGCTGTATGTGGAGACCCAAGAGAAGTTTTACGC
FD565001       <-- AACAGGGAGAAACAAAAGCTGTATGTGGAGACCCAAGAGAAGTTTTACGC
FD942130       <-- AACAGGGAGAAACAAAAGCTGTATGTGGAGACCCAAGAGAAGTTTTACGC
EY937928       <-- ..................................................
FD945920       --> AACAGGGAGAAACAAAAGCTGTATGTGGAGACCCAAGAGAAGTTCTACGC
FD572404       --> AACAGGGAGAAACAAAAGCTGTATGTGGAGGCCCAAGAGAAGTTCTACGC
FD560629       --> AACAGGGAGAAACAAAAGCTGTATGTGGAGACCCAAGAGAAGTTTTACGC
FD953970       --> AACAGGGAGAAACAAAAGCTGTATGTGGAGACCCAAGAGAAGTTTTACGC
FY454615       --> ....................................GAGAAGTTTTACGC
EY934166       --> ..................................................

               501    -    551
UN20045        --> GGAAGCAAGCAAGAACTACTGGAAGGCAATAGCAGAGCTAGTGCCTAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- GGAAGCAAGCAAGAACTACTGGAAGGCAATAGCAGAGCTGGTGCCTAAAG
FD950309       <-- GGAAGCAAGCAAGAACTACTGGAAGGCAATAGCAGAGCTAGTGCCTAAAG
FD565001       <-- GGAAGCAAGCAAGAACTACTGGAAGGCAATAGCAGAGCTAGTGCCTAAAG
FD942130       <-- GGAAGCAAGCAAGAACTACTGGAAGGCAATAGCAGAGCTAGTGCCTAAAG
EY937928       <-- ..................................................
FD945920       --> GGAAGCAAGCAAGAACTACTGGAAGGCAATAGCAGAGCTAGTGCCTAAAG
FD572404       --> GGAAGCAAGCAAGAACTACTGGAAGGCAATAGCAGAGCTGGTGCCTAAAG
FD560629       --> GGAAGCAAGCAAGAACTACTGGAAGGCAATAGCAGAGCTAGTGCCTAAAG
FD953970       --> GGAAGCAAGCAAGAACTACTGGAAGGCAATAGCAGAGCTAGTGCCTAAAG
FY454615       --> GGAAGCAAGCAAGAACTACTGGAAGGCAATAGCAGAGCTAGTGCCTAAAG
EY934166       --> ..................................................

               551    -    601
UN20045        --> AGGTTCCAATTATAGAGAAAACAAGAAGAGGGAAGAAGAAAGAGGAAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- AGGTTCCAACTATAGAGAAAACAAGAAGAGGGAAGAAGAAAGAGGAAGAT  Raphanus sativus cv Early Scarlet Globe
FD950309       <-- AGGTTCCAATTATAGAGAAAACAAGAAGAGGGAAGAAGAAAGAGGAAGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD565001       <-- AGGTTCCAATTATAGAGAAAACAAGAAGAGGGAAGAAGAAAGAGGAAGAT  Raphanus sativus var. oleiformis
FD942130       <-- AGGTTCCAACTATAGAGAAAACAAGAAGAGGGAAGAAGAAAGAGGAAGAT  Raphanus sativus cv Early Scarlet Globe
EY937928       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD945920       --> AGGTTCCAACTATAGAGAAAACAAGAAGAGGGAAGAAGAAAGAGGAAGAT  Raphanus sativus cv Early Scarlet Globe
FD572404       --> AGGTTCCAACTATAGAGAAAACAAGAAGAGGGAAGAAGAAAGAGGAAGAT  Raphanus sativus cv Early Scarlet Globe
FD560629       --> AGGTTCCAATTATAGAGAAAACAAGAAGAGGGAAGAAGAAAGAGGAAGAT  Raphanus sativus var. oleiformis
FD953970       --> AGGTTCCAATTATAGAGAAAACAAGAAGAGGGAAGAAGAA..........  Raphanus sativus cv Rat-Tail Radish #3870
FY454615       --> AGGTTCCAATTATAGAGAAAACAAGAAGAGGGAAGAAGAAAGAGGAAGAT  Raphanus sativus cv GSK3-1
EY934166       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               601    -    651
UN20045        --> CCCAAGAAGCCTACTACAATCTCTGTGATTCAAGGACCAAAGCCTGGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- CCCAATAAGCCTACTACAATCTCTGTGATTCAAGGACCAAAGCCTGGTAA  Raphanus sativus cv Early Scarlet Globe
FD950309       <-- CCCAAGAAGCCAACAACAATCTCTGTGA---TTGGACCAAAGCCTGGTAA  Raphanus sativus cv Rat-Tail Radish #3870
FD565001       <-- CCCAAGAAGCCAACAACAATTTCTGTGA---TTGGACCAAAGCCTGGTAA  Raphanus sativus var. oleiformis
FD942130       <-- CC-AAGAAGCCTACTACAATTTTTGTGATTCAAGGACCAAAGCCTGGTAA  Raphanus sativus cv Early Scarlet Globe
EY937928       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD945920       --> CC-AAGAAGCCTACTACAATCTCTGTGATTCAAGGACCAAAGCCTGGTAA  Raphanus sativus cv Early Scarlet Globe
FD572404       --> CCCAATAAGCCTACTACAATCTCTGTGATTCAAGGACCAAAGCCTGGTAA  Raphanus sativus cv Early Scarlet Globe
FD560629       --> CCCAAGAAGCCAACAACAATCTCTGTGATT---GGACCAAAGCCTGGTAA  Raphanus sativus var. oleiformis
FD953970       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY454615       --> CCCAAGAAGCCAACAACAATCTCTGTGATT---GGACCAAAGCCTGGTAA  Raphanus sativus cv GSK3-1
EY934166       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN20045        --> GCCAACCGATCTCTCGAGAATGAGACAGATATTGCTGAAGCTCAAACAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- GCCAACCGATCTCTCGAGAATGAGACAGATATTGCTGAAGCTCAAACAGA
FD950309       <-- GCCAACCGATCTCTCGAGAATGAGACAGATATTGCTGAAGCTCAAACAGA
FD565001       <-- GCCAACCGATCTCTCGAGAATGAGACAGATATTGCTGAAGCTCAAACAGA
FD942130       <-- GCCAACCGATCTTTCGAGAATGAGACAGATATTGCTGAAGCTCAAACAGA
EY937928       <-- ..................................................
FD945920       --> GCCAACCGATCTCTCGAGAATGAGACAGATATTGCTGAAGCTCAAACAGA
FD572404       --> GCCAACCGATCTCTCGAGA-TGAGACAGATATTGCTGAAGCTCAAACAGA
FD560629       --> GCCAACCGATCTCTCGAGAATGAGACAGATATTGCTGAAGCTCAAACAGA
FD953970       --> ..................................................
FY454615       --> GCCAACCGATCTCTCGAGAATGAGACAGATATTGCTGAAGCTCAAACAGA
EY934166       --> ..................................................

               701    -    751
UN20045        --> ACCCGCCTGCTCACCTCAAACTCACTCCTCAACCTCCTCCATCTGAGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- ACCCGCCTGCTCACCTCAAACTCACTCCTCAACCTCCTCCATCTGAGGCT
FD950309       <-- ACCCGCCTGCTCACCTCAAACTCACTCCTCAACCTCCTCCATCTGAGGCT
FD565001       <-- ACCCGCCTGCTCACCTCAAACTCACTCCTCAACCTCCTCCATTTGAGGCT
FD942130       <-- ACCCGCCTGCTCACCTCAAACTCACTCCTCAACCTCCTCCATTTGAGGCT
EY937928       <-- ..................................................
FD945920       --> ACCCGCCTGCTCACCTCAAACTCACTCCTCAACCTCCTCCATCTGAG-CT
FD572404       --> ACCCGCCTGCTCACC...................................
FD560629       --> ACCCGCCTGCTCAC-TCAAACTCACTCCTCA-CCTCCTCCATCTGAGctg
FD953970       --> ..................................................
FY454615       --> ACCCGCCTGCTCACCTCAAACTCACTCCTCAACCTCCTCCATCTGAGGCT
EY934166       --> ..................................................

               751    -    801
UN20045        --> GCTCCTCCAGAGAATGTTCCTCAAACCAAGCCCGCCGAGGCTGTTGCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- GCTCCTCCAAAGAATGTTCCTCAAACCAAGCCCGCCGAGGCTGTTGCTGC
FD950309       <-- GCTCCTCCAGAGAATGTTCCTCAAACCAAGCCCGCCGAGGCTGTTGCTGC
FD565001       <-- GCTCCTCCAGAGAATGTTCCTCAAACCAAGCCCGCCGAGGCTGTTGCTGC
FD942130       <-- GCTCCTCCAAAGAATGTTCCTCAAACCAAGCCCGCCGAGGCTGTTGCTGC
EY937928       <-- ..................................................
FD945920       --> GCTCCTCCAAAGAATGTTCCTCAAAC-AAGCCCGCCGAG-CTG-TGCTGC
FD572404       --> ..................................................
FD560629       --> c.................................................
FD953970       --> ..................................................
FY454615       --> GCTCCTCCAGAGAATGTTCCTCAAACCAAGCCCGCCGAGGCTGTTGCTGC
EY934166       --> ..................................................

               801    -    851
UN20045        --> TTCTTAGGAAGCCATCTTCGCTTTTGTTATTCGTTTCTTATGTGTTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- TTCTTAGGAAGCCATCTTCGCTTTTGTTATTCGTTTCTTATGTGTTTGTT
FD950309       <-- TTCTTAGGAAGCCATCTTCGCTTTTGTTATTCGTTTCTTATGTGTTTGTT
FD565001       <-- TTTTTAGGAAGCCATCTTCGTTTTTGTTATTCGTTTCTTATGTGTTTGTT
FD942130       <-- TTTTTAGGAAGCCATTTTCGCTTTTGTTATTCGTTTTTTATGTGTTTGTT
EY937928       <-- ..................................................
FD945920       --> Tctagagcatctcgctttgtatcgttcta.....................
FD572404       --> ..................................................
FD560629       --> ..................................................
FD953970       --> ..................................................
FY454615       --> TTCTTAGGAAGCCATCTTCGCTTTTGTTATTCGTTTCTTATGTGTTTGTT
EY934166       --> ..................................................

               851    -    901
UN20045        --> ATATATACAGCTGAGATATTGTAAGGGGCACATGTGTGTTA-TATTATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- ATAT--ACAGCTGAGATATTGTAAGGGGCACATGTGTGTTA---TTATTA
FD950309       <-- ATATATACAGCTGAGATATTGTAAGGGGCACATGTGTGTTACTATTATTA
FD565001       <-- ATATATACAGCTGAGATATTGTAAGGGGCACATGTGTGTTACTATTATTA
FD942130       <-- ATAT--ACAGGTGAGATATTGTAAGGGGCACATGTGTGTTA---TTATTA
EY937928       <-- ....................GTAAGGGGCACATGTGTGTTA---TTATTA
FD945920       --> ..................................................
FD572404       --> ..................................................
FD560629       --> ..................................................
FD953970       --> ..................................................
FY454615       --> ATATATACAGCTGAGATATTGTAAGGGGCACATGTGTGTTACTATTATTA
EY934166       --> ....................GTAAGGGGCACATGTGTGTTA-T--TATTA

               901    -    951
UN20045        --> ACTGTTATGTTATGTTCGATGATACTTGATAACTCAAATCAGAAATCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- ACTGTTATGTTATGTTCGATGAT...........................
FD950309       <-- ACAGTTATGTTATGTTCGATG.............................
FD565001       <-- ACAGTTATGTTATGTTCGATG.............................
FD942130       <-- ACTGTTATGTTATGTTCG................................
EY937928       <-- ACTGTTATGTTATGTTCGATGATACTTGATAACTCAAATCAGAAATCATT
FD945920       --> ..................................................
FD572404       --> ..................................................
FD560629       --> ..................................................
FD953970       --> ..................................................
FY454615       --> ACAGTTATGTTATGTTCGATGATACTTGATt...................
EY934166       --> ACTGTTATGTTATGTTCGATGATACTTGATAACTCAAATCAGAAATCATT

               951    -   1001
UN20045        --> AAAAAAAGTGGTTAAATTATCTCAAACAATCAGATAACAACAAGAAATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- ..................................................
FD950309       <-- ..................................................
FD565001       <-- ..................................................
FD942130       <-- ..................................................
EY937928       <-- AAAAAAAGTGGTTAAATTATCTCAAACAATCAGATAACAACAAGAAATAC
FD945920       --> ..................................................
FD572404       --> ..................................................
FD560629       --> ..................................................
FD953970       --> ..................................................
FY454615       --> ..................................................
EY934166       --> AAAAAAAGTGGTTAAATTATCTCAAACAATCAGATAACAACAAGAAATAC

               1001   -   1051
UN20045        --> CATAGAGGCGACTTCAGGTTAGACAGATATCATCATCAATCTCGTGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- ..................................................
FD950309       <-- ..................................................
FD565001       <-- ..................................................
FD942130       <-- ..................................................
EY937928       <-- CATAGAGGCGACTTCAGGTTAGACAGATATCATCATCAATCTCGTGTGAA
FD945920       --> ..................................................
FD572404       --> ..................................................
FD560629       --> ..................................................
FD953970       --> ..................................................
FY454615       --> ..................................................
EY934166       --> CATAGAGGCGACTTCAGGTTAGACAGATATCATCATCAATCTCGTGTGAA

               1051   -   1101
UN20045        --> AGACACTCTGCAATAATAATTGAGAGAAGAGGATCTCAAAAGTCAACGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- ..................................................
FD950309       <-- ..................................................
FD565001       <-- ..................................................
FD942130       <-- ..................................................
EY937928       <-- AGACACTCTGCAATAATAATTGAGAGAAGAGGATCTCAAAAGTCAACGGT
FD945920       --> ..................................................
FD572404       --> ..................................................
FD560629       --> ..................................................
FD953970       --> ..................................................
FY454615       --> ..................................................
EY934166       --> AGACACTCTGCAATAATAATTGAGAGAAGAGGATCTCAAAAGTCAACGGT

               1101   -   1151
UN20045        --> TTACAGATTTCTTCTTCACTCTTTTCATCCTATCTCCCTTGTAAGCTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- ..................................................
FD950309       <-- ..................................................
FD565001       <-- ..................................................
FD942130       <-- ..................................................
EY937928       <-- TTACAGATTTCTTCTTCACTCTTTTCATCCTATCTCCCTTGTAAGCTGCT
FD945920       --> ..................................................
FD572404       --> ..................................................
FD560629       --> ..................................................
FD953970       --> ..................................................
FY454615       --> ..................................................
EY934166       --> TTACAGATTTCTTCTTCACTCTTTTCATCCTATCTCCCTTGTAAGCTGCT

               1151   -   1201
UN20045        --> TGCAGGGGACCTGCAACCTCTCCCGCTGCCTGCGTCATCTTCCTTTTCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- ..................................................
FD950309       <-- ..................................................
FD565001       <-- ..................................................
FD942130       <-- ..................................................
EY937928       <-- TGCAGGGGACCTGCAACCTCTCCCGCTGCCTGCGTCATCTTCCTTTTCGC
FD945920       --> ..................................................
FD572404       --> ..................................................
FD560629       --> ..................................................
FD953970       --> ..................................................
FY454615       --> ..................................................
EY934166       --> TGCAGGGGACCTGCAACCTCTCCCGCTGCCTGCGTCATCTTCCTTTTCGC

               1201   -   1251
UN20045        --> TAGCTGCCTCTAAGCACATGCCATTGTTGTTGTAGACACTGATCTCTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- ..................................................
FD950309       <-- ..................................................
FD565001       <-- ..................................................
FD942130       <-- ..................................................
EY937928       <-- TAGCTGCCTCTAAGCACATGCCATTGTTGTTGTAGACACTGATCTCTGAG
FD945920       --> ..................................................
FD572404       --> ..................................................
FD560629       --> ..................................................
FD953970       --> ..................................................
FY454615       --> ..................................................
EY934166       --> TAGCTGCCTCTAAGCACATGCCATTGTTGTTGTAGACACTGATCTCTGAG

               1251   -   1301
UN20045        --> CTCGCGTTGCTGCTTGTCGCCAGTGGAGAATCTGATACATTCATTGGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- ..................................................
FD950309       <-- ..................................................
FD565001       <-- ..................................................
FD942130       <-- ..................................................
EY937928       <-- CTCGCGTTGCTGCTTGTCGCCAGTGGAGAATCTGATACATTCATTGGTCT
FD945920       --> ..................................................
FD572404       --> ..................................................
FD560629       --> ..................................................
FD953970       --> ..................................................
FY454615       --> ..................................................
EY934166       --> CTCGCGTTGCTGCTTGTCGCCAGTGGAGAATCTGATACATTCATTGGTCT

               1301   -   1351
UN20045        --> GCCACGAGTATGTCCAGATCTCACACTGTACATTGATGATGCTGGAATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- ..................................................
FD950309       <-- ..................................................
FD565001       <-- ..................................................
FD942130       <-- ..................................................
EY937928       <-- GCCACGAGTATGTCCAGATCTCACACTGTACATTGATGATGCTGGAATGT
FD945920       --> ..................................................
FD572404       --> ..................................................
FD560629       --> ..................................................
FD953970       --> ..................................................
FY454615       --> ..................................................
EY934166       --> GCCACGAGTATGTCCAGATCTCACACTGTACATTGATGATGCTGGAATGT

               1351   -   1401
UN20045        --> TTGTCATTAGTGGTCTCAGATTCCCTGGTATGGTCCTACGTATATCCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- ..................................................
FD950309       <-- ..................................................
FD565001       <-- ..................................................
FD942130       <-- ..................................................
EY937928       <-- TTGTCATTAGTGGTCTCAGATTCCCTGGTATGGTCCTACGTATATCCATA
FD945920       --> ..................................................
FD572404       --> ..................................................
FD560629       --> ..................................................
FD953970       --> ..................................................
FY454615       --> ..................................................
EY934166       --> TTGTCATTAGTGGTCTCAGATTCCCTGGTATGGTCCTACGTATATCCATA

               1401   -   1451
UN20045        --> TGTCTTATAGCCATATCAGGGGACTTCTTGGAGAGATTTCTTCCAAACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- ..................................................
FD950309       <-- ..................................................
FD565001       <-- ..................................................
FD942130       <-- ..................................................
EY937928       <-- TGTCTTATAGCCATATCAGGGGACTTCTTGGAGAGATTTCTTCCAAACCC
FD945920       --> ..................................................
FD572404       --> ..................................................
FD560629       --> ..................................................
FD953970       --> ..................................................
FY454615       --> ..................................................
EY934166       --> TGTCTTATAGCCATATCAGGGGACTTCTTGGAGAGATTTCTTCCAAACCC

               1451   -   1501
UN20045        --> TGCACTGTCTGGTGATGAGGACTTTGCAGACAAATTACCATGAGGAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- ..................................................
FD950309       <-- ..................................................
FD565001       <-- ..................................................
FD942130       <-- ..................................................
EY937928       <-- TGCACTGTCTGGTGATGAGGACTTTGCAGACAAATTACCATGAGGAGAAC
FD945920       --> ..................................................
FD572404       --> ..................................................
FD560629       --> ..................................................
FD953970       --> ..................................................
FY454615       --> ..................................................
EY934166       --> TGCACTGTCTGGTGATGAGGACTTTGCAGACAAATTACCATGAGGAGAAC

               1501   -   1551
UN20045        --> CCTTTTCATCTGATCTGGGAGGAGCCAGTTTCCGCATGTTTATCACTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD576054       <-- ..................................................
FD950309       <-- ..................................................
FD565001       <-- ..................................................
FD942130       <-- ..................................................
EY937928       <-- CCTTTTCATCTGATCTGGGAGGAGCCAGTTTCCGCATGTTTATCACTCTC
FD945920       --> ..................................................
FD572404       --> ..................................................
FD560629       --> ..................................................
FD953970       --> ..................................................
FY454615       --> ..................................................
EY934166       --> CCTTTTCATCTGATCTGGGAGGAG..........................

               1551   -   1601
UN20045        --> TCCACCATC
                   ~~~~~~~~~
FD576054       <-- .........
FD950309       <-- .........
FD565001       <-- .........
FD942130       <-- .........
EY937928       <-- TCCACCATC
FD945920       --> .........
FD572404       --> .........
FD560629       --> .........
FD953970       --> .........
FY454615       --> .........
EY934166       --> .........