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Alignment for radish unigene UN20050

               1      -     51
UN20050        --> GTAAGGGATGCAATATCAGGACAAATCTTGGTGATAAGGTCAAGTTTAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> GTAAGGGATGCAATATCAGGACAAATCTTGGTGATAAGGTCAAGTTTAGG
FD576315       --> ..................................................
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               51     -    101
UN20050        --> TGGGGAAGTAGATGGACTAGGAGGAGGAGGAGGAGTTGGTATAAGTAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> TGGGGAAGTAGATGGACTAGGAGGAGGAGGAGGAGTTGGTATAAGTAGGT
FD576315       --> ..................................................
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               101    -    151
UN20050        --> TAAGGAACGTTGATCAACAGGTAAGGCAACAGAGAGCGTTGCAGAGGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> TAAGGAACGTTGATCAACAGGTAAGGCAACAGAGAGCGTTGCAGAGGTTA
FD576315       --> ..................................................
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               151    -    201
UN20050        --> GGCGTGATGCAACCACCTCACGCTTGGAGGCCTCAACGCGGCCTACCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> GGCGTGATGCAACCACCTCACGCTTGGAGGCCTCAACGCGGCCTACCTGA
FD576315       --> ..................................................
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               201    -    251
UN20050        --> TTCCTCTGTTTTGATACTCCGTGCTTGGCTCTTTGAGCATTTCCTCCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> TTCCTCTGTTTTGATACTCCGTGCTTGGCTCTTTGAGCATTTCCTCCACC
FD576315       --> ..................................................
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               251    -    301
UN20050        --> CTTATCCAAAGGATTCGGACAAGATCATGCTAGCTAGACAAACAGGGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> CTTATCCAAAGGATTCGGACAAGATCATGCTAGCTAGACAAACAGGGTTG
FD576315       --> ..............gCGGACAAGATCATGCTAGCTAGACAAACAGGGTTG
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               301    -    351
UN20050        --> AGCAGAGGCCAGGTGTCGAACTGGTTTATAAACGCACGTGTGCGTCTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> AGCAGAGGCCAGGTGTCCAACTGGTTTATAAACGCACGTGTGCGTCTCTG
FD576315       --> AGCAGAGGCCAGGTGTCGAACTGGTTTATAAACGCACGTGTGCGTCTCTG
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               351    -    401
UN20050        --> GAAACCGATGGTGGAGGAGATGTACAAGGAAGAGTTCACAGACGCATTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> GAAACCGATGGTGGAGGAGATGTACAAGGAAGAGTTCACAGACGCATTGG
FD576315       --> GAAACCGATGGTGGAGGAGATGTACAAGGAAGAGTTCACAGACGCATTGG
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               401    -    451
UN20050        --> AGGAGAATGCTACCACCTTGTCTTCTGGAAACAACAGACCTGAAACCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> AGGAGAATGCTACCACCTTGTCTTCTGGAAACAACAGACCAGAAACCACC
FD576315       --> AGGAGAATGCTACCACCTTGTCTTCTGGAAACAACAGACCTGAAACCACC
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               451    -    501
UN20050        --> GAGTCTCAAGAACAGCATCAGCTCGTGTCTAGTTCCAGCAACGGTGGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> GAGTCTCAAGAACAGCATCAGCTCGTGTCTAGTTCCAG-AACGGTGGTGG
FD576315       --> GAGTCTCAAGAACAGCATCAACTCGTGTCTAGTTCCAGCAACGGTGGTGG
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               501    -    551
UN20050        --> TGACGACCGGTTCATGATGGTCACCGAAATGACAAGAAATGGTAGTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> TGACGACCGGTTCATGATGGTCACCGAAATGACAAGAAATGGTAGTGGTG
FD576315       --> TGACGACCGGTTCATGATGGTCACCGAAATGACAAGAAATGGTAGTGGTG
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               551    -    601
UN20050        --> GGATGTCTTTAACATTAGGCATTCCGGACACACGCGGCAACGACGTACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> GGATGTCTTTAACATTAGGCATTCCGGACACACGCAGCAACGACGTACCT
FD576315       --> GGATGTCTTTAACATTAGGCATTCCGGACACACGCGGCAACGACGTACCT
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               601    -    651
UN20050        --> ATGTCCGGCGACAGCTACGAGAACAGCATCCAGGGAACCAGTTTCCAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> ATGTCCAGCGACAGCTACGAGAACAGCATCCAGGGAACCAGTTTCCAGTA
FD576315       --> ATGTCCGGCGACAGCTACGAGAACAGCATCCAGGGAACCAGTTTCCAGTA
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               651    -    701
UN20050        --> TTTAAACTCAGGCAACGGCCAGCACCGACTTGGCTCGGCACAATTCTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> TTTAcac...........................................
FD576315       --> TTTAAACTCAGGCAACGGCCAGCACCGACTTGGCTCGGCACAATTCTTGC
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               701    -    751
UN20050        --> AGGATTTTGTAGCTTGATGAAAAATACAATAGAGAGGGTGTAGTAATAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> ..................................................
FD576315       --> AGGATTTTGTAGCTTGATGAAAAATACAATAGAGAGGGTGTAGTAATAAT
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               751    -    801
UN20050        --> TATATTCTTTTTGTGAAAGTAAACCATCAGATGGAATTAACGAGGACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> ..................................................
FD576315       --> TATATTCTTTTTGTGAAAGTAAACCATCAGATGGAATTAACGAGGACAAC
EV573471       --> ................................GGAATTAACGAGGACAAC
FD545155       --> ................................aGAATTAACGAGGACAAC
EX768531       --> ......................................AACGAGGACAAC
EX899930       --> ..................................................
EV539723       --> ..................................................

               801    -    851
UN20050        --> TAGCATATCATAAGGCCAAAGGTTTTCACATCAAAAGAACAATAGAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> ..................................................
FD576315       --> TAGCATATCATAAGGCCAAAGGTTTTCAC.....................
EV573471       --> TAGCATATCATAAGGCCAAAGGTTTTCACATCAAAAGAACAATAGAAGCT
FD545155       --> TAGCATATCATAAGGCCAAAGGTTTTCACATCAAAAGAACAATAGAAGCT
EX768531       --> TAGCATATCATAAGGCCAAAGGTTTTCACATCAAAAGAACAATAGAAGCT
EX899930       --> ...........................ACATCAAAAGAACAATAGAAGCT
EV539723       --> ..................................................

               851    -    901
UN20050        --> CACTACTTAATGAAACAAAACCACAAGCACGTCCAAAAGATTCAACAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> CACTACTTAATGAAACAAAACCACAAGCACGTCCAAAAGATTCAACAATC
FD545155       --> CACTACTTAATGAAACAAAACCACAAGCACGTCCAAAAGATTCAACAATC
EX768531       --> CACTACTTAATGAAACAAAACCACAAGCACGTCCAAAAGATTCAACAATC
EX899930       --> CACTACTTAATGAAACAAAACCACAAGCACGTCCAAAAGATTCAACAATC
EV539723       --> ..................................................

               901    -    951
UN20050        --> TTTCACAAAAACCAAAAGGACCCTACCCGAAGTTATCTTATTGACAGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> TTTCACAAAAACCAAAAGGACCCTACCCGAAGTCATCTTATTGACAGGTT
FD545155       --> TTTCACAAAAACCAAAAGGACCCTACCCGAAGTTATCTTATTGACAGGTT
EX768531       --> TTTCACAAAAACCAAAAGGACCCTACCCGAAGTTATCTTATTGACAGGTT
EX899930       --> TTTCACAAAAACCAAAAGGACCCTACCCGAAGTTATCTTATTGACAGGTT
EV539723       --> ..................................................

               951    -   1001
UN20050        --> TCTAAAACATAAGCATGTCCAAAGCCACAAGAACAAGTTTCCATCAGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> TCTAAAACATAAGCATGTCCAAAGCCACAAGAACAAGTTTCCATCAGTAA
FD545155       --> TCTAAAACATAAGCATGTCCAAAGCCACAAGAACAAGTTTCCATCAGTAA
EX768531       --> TCTAAAACATAAGCATGTCCAAAGCCACAAGAACAAGTTTCCATCAGTAA
EX899930       --> TCTAAAACATAAGCATGTCCAAAGCCACAAGAACAAGTTTCCATCAGTAA
EV539723       --> ..................................................

               1001   -   1051
UN20050        --> ATTTTCTTCGGTTTACCTTTTGTAGAGAACTCTTATATCTTCTCGTAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> ATTTTCTTCGGTTTACCTTTTGTAGAGAACTCTTATATCTTCTCGTAAGG
FD545155       --> ATTTTCTTCGGTTTACCTTTTGTAGAGAACTCTTATATCTTCTCGTAAGG
EX768531       --> ATTTTCTTCGGTTTACCTTTTGTAGAGAACTCTTATATCTTCTCATAAGG
EX899930       --> ATTTTCTTCGGTTTACCTTTTGTAGAGAACTCTTATATCTTCTCGTAAGG
EV539723       --> ..................................................

               1051   -   1101
UN20050        --> CAGGACTTTCAAGGAACAGATCACCAGCATCATCCACATCGATTGTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..........................................aTGTCTCT
EX764657       <-- ..............................................CTCT
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> GAGGACTTTCAAGGAACAGATCACCAGCATCATCCACATCGATTGTCTCT
FD545155       --> CAGGACTTTCAAGGAACAGATCACCAGCATCATCCACATCGATTGTCTCT
EX768531       --> CAGGACTTTTAAGGAACAGATCACCGGCATCATCCACATCGATTGTCTCT
EX899930       --> CAGGACTTTCAAGGAACATATCACCAGCATCATCCACATCGATTGTCTCT
EV539723       --> ..................................................

               1101   -   1151
UN20050        --> ACCTCAAAGTTACGGTATCCACAGTACTCATTCCACTCGAACCACATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- AC-TCAAAGTTACGGTATCCACAGTACTCATTCCACTCGAACCACATCTT
EX764657       <-- ACCTCAAAGTTACGGTATCCACAGTACTCATTCCACTCGAACCACATCTT
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> ACCTCAAAGTTACGGTATCCACAGTACTCATTCCACTCGAACCACATCTT
FD545155       --> ACCTCAAAGTTACGGTATCCACAGTACTCATTCCACTCGAACCACATCTT
EX768531       --> ACCTCAAAGTTACGGTATCCACAGTACTCATTCCACTCGAACCACATCTT
EX899930       --> ACCTCAAAGTTACGGTATCCACAGTACTCATTCCACTCGAACCACATCTT
EV539723       --> ..................................................

               1151   -   1201
UN20050        --> TGAGATGACTTCCTTTTTGAAGCAAGTGTTGTGATCCTCTTCCTCAGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- TGAGATGACTTCCTTTTTGAAGCAAGTGTTGTGATCCTCTTCCTCAGGTG
EX764657       <-- TGAGATGACTTCCTTTTTGAAGCAAGTGTTGTGATCCTCTTCCTCAGGTG
EX895922       <-- ..................................................
FD549058       <-- ..................................................
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> TGAGATGACTTCCTTTTTGAAGCAAGTGTTGTGATCCTCTTCCTCAGGTG
FD545155       --> TGAGATGACTTCCTTTTTGAAGCAAGTGTTGTGATCCTCTTCCTCAGGTG
EX768531       --> TGAGATGACTTCCTTTTTGAAGCAAGTGTTGTGATCCTCTTCCTCAGGTG
EX899930       --> TGAGATGACTTCCTTTTTGAAGCAAGTGTTGTGATCCTCTTCCTCAGGTG
EV539723       --> ......................................CTTCCTCAGGTG

               1201   -   1251
UN20050        --> ATGACCCAGCGATCAATCTGTACGCATGCACTTTCTTCGTCTGTCCTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ATGACCCAGCTATCAATCTGTACGCATGCACTTTCTTCGTCTGTCCTGGT  Raphanus raphanistrum subsp. landra
EX764657       <-- ATGACCCAGCGATCAATCTGTACGCATGCACTTTCTTCGTTTGCCCTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX895922       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD549058       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765665       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576315       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV573471       --> ATGACCCAGCTATCAATCTGTACGCATGCACTTTCTTCGTCTGTCCTGGT  Raphanus raphanistrum subsp. landra
FD545155       --> ATGACCCAGCGATCAATCTGTACGCATGCACTTTCTTCGTTTGCCCTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768531       --> ATGACCCAGCGATCAATCTGTACGCATGCACTTTCTTCGTTTGCCCTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899930       --> ATGACCCAGCTATCAATCTGTACGCATGCACTTTCTTCGTCTGTCCTGGT  Raphanus sativus cv Early Scarlet Globe
EV539723       --> ATGACCCAGCGATCAATCTGTACGCATGCACTTTCTTCGTCTGTCCTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)

               1251   -   1301
UN20050        --> CTAAAAGCTCTCCCTATCGCTTGGCGTGTCACTGAAGGGTTTAGAGGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- CTAAAAGCTCTCCCTATCGCTTGGCGTGTCACTGAAGGGTTTAGAGGAAC  Raphanus raphanistrum subsp. landra
EX764657       <-- CTAAAAGCTCTCCCAATCGCTTGGCGTGTCACTGAAGGGTTTAGAGGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX895922       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD549058       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765665       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576315       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV573471       --> CTAAAAGCTCTCCCTATCGCTTGGCGTGTCACTGAAGGGTTTAGAGGAAC  Raphanus raphanistrum subsp. landra
FD545155       --> CTAAAAGCTCTCCCAATCGCTTGGCGTGTCACTGAAGGGTTTAGAGGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768531       --> CTAAAAGCTCTCCCAATCGCTTGGCGTGTCACTGAAGGGTTTAGAGGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899930       --> CTAAAAGCTCTCCCTATCGCTTGGCGTGTCACTGAAGGGTTTAGAGGAAC  Raphanus sativus cv Early Scarlet Globe
EV539723       --> CTAAAAGCTCTCCCTATAGCTTGGCGTGTCACTGAAGGGTTTAGAGGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)

               1301   -   1351
UN20050        --> ATCCAGAATCAGTATCCGAGATGCTCCAACTAGAGAGATACCTTCTCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ATCCAGAATCAGTATCCGAGATGCTCCAACTAGAGAGATACCTTCTCCAC  Raphanus raphanistrum subsp. landra
EX764657       <-- ATCCAGAATCAGTATCCGAGATGCTCCAACTAGAGATATACCTTCTCCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX895922       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD549058       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765665       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576315       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV573471       --> ATCCAGAATCAGTATCCGAGATGCTCCAACTAGAGAGATACCTTCTCCAC  Raphanus raphanistrum subsp. landra
FD545155       --> ATCCAGAATCAGTATCCGAGATGCTCCAACTAGAGATATACCTTCTCCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768531       --> ATCCAGAATCAGTATCCGAGATGCTCCAACTAGAGATATACCTTCTCCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899930       --> ATCCAGAATCAGTATCCGAGATGCTCCAACTAGAGAGATACCTTCTCCAC  Raphanus sativus cv Early Scarlet Globe
EV539723       --> ATCCAGAATCAGTATCCGAGATGCTCCAACAAGAGAGATACCTTCTCCAC  Raphanus raphanistrum subsp. raphanistrum (MS)

               1351   -   1401
UN20050        --> AGGCCCTTATCGAACCGAAGAACACTTTGGCGTCTGGCGAATTGTTGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- AGGCCCTTATCGAACCGAAGAACACTTTGGCGTCTGGCGAATTGTTGAAC  Raphanus raphanistrum subsp. landra
EX764657       <-- AAGCCCTTATCGAACCGAAGAATACTTTGGCGTCTGGCGAATTGTTGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX895922       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD549058       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765665       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576315       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV573471       --> AGGCCCTTATCGAACCGAAGAACACTTTGGCGTCTGGCGAATTGTTGAAC  Raphanus raphanistrum subsp. landra
FD545155       --> AAGCCCTTATCGAACCGAAGAATACTTTGGCGTCTGGCGAATTGTTGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768531       --> AAGCCCTTATCGAACCGAAGAATACTTTGGCGTCTGGCGAATTGTTGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899930       --> AGGCCCTTATCGAACCGAAGAACACTTTGGCGTCTGGCGAATTGTTGAAC  Raphanus sativus cv Early Scarlet Globe
EV539723       --> AGGCCCTTATCGAACCGAAGAACACTTTGGCGTCTGGCGAATTGTTGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)

               1401   -   1451
UN20050        --> CTTTCCATAGACAACTCACGCTGCTCAGAGCTGGATTCTCCTGTGAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- CTTTCCATAGACAACTCACGCTGCTCAGAGCTGGATTCTCCTGTGAGAAC  Raphanus raphanistrum subsp. landra
EX764657       <-- CTTTCCATAGACAACTCACGCTGCTCAGAGCTGGATTCCCCCGTAAGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX895922       <-- .......TAGACA-CTCACGCTGCTCAGAGCTG-A-TCT-CTGTGAG-AC  Raphanus sativus cv Early Scarlet Globe
FD549058       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765665       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576315       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV573471       --> CTTTCCATAGACAACTCACGCTGCTCAGAGCTGGATTCTCCTGTGAGAAC  Raphanus raphanistrum subsp. landra
FD545155       --> CTTTCCATAGACAACTCACGCTGCTCAGAGCTGGATTCCCCCGTAAGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768531       --> CTTTCCATAGACAACTCACGCTGCTCAGAGCTGGATTCCCCCGTAAGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899930       --> CTTTCCATAGACAACTCACGCTGCTCAGAGCTGGATTCTCCTGTGAGAAC  Raphanus sativus cv Early Scarlet Globe
EV539723       --> CTTTCCATAGACAACTCACGCTGCTCAGAGCTGGATTCTCCTGTGAGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)

               1451   -   1501
UN20050        --> AAAGACTTCTTTCCCTAGCTTCCATCCTTTAGCTAGAGCAGCTAGTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- AAAGACTTCTTTCCCTAGCTTCCATCCTTTAGCTAGAGCAGCTAGTCTTT  Raphanus raphanistrum subsp. landra
EX764657       <-- AAAGACTTCTTTCCCTAGCTTCCATCCCTTAGCTAGAGCAGCTAGTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX895922       <-- AAAGACTT-TTTCCCTAGCTTCCATCCTTTAGCTAGACCAGCTAGTCTT-  Raphanus sativus cv Early Scarlet Globe
FD549058       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765665       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576315       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV573471       --> AAAGACTTCTTTCCCTAGCTTCCATCCTTTAGCTAGAGCAGCTAGTCTTT  Raphanus raphanistrum subsp. landra
FD545155       --> AAAGACTTCTTTCCCTAGCTTCCATCCCTTAGCTAGAGCAGCTAGTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768531       --> AAAGACTTCTTTCCCTAGCTTCCATCCCTTAGCTAGAGCAGCTAGTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899930       --> AAAGACTTCTTTCCCTAGCTTCCATCCTTTAGCTAGACCAGCTAGTCTTT  Raphanus sativus cv Early Scarlet Globe
EV539723       --> AAAGACTTCTTTCCCTAGCTTCCATCCCTTAGCTAGAGCAGCTAGTCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               1501   -   1551
UN20050        --> CAAGAAACTTCAGAGGCACGAGATACTGGCTGAAAACCAAGAGCTTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- CAAGAAACTTCAGAGGCACGAGATACTGGCTGAAAACCAAGAGCTTCTCC
EX764657       <-- CAAGAAACTTCAGAGGCACGAGATACTGGCTGAAAACCAAGAGCTTCTCC
EX895922       <-- CAAGAAACT-CAGAGGCACGAGATACTGGCTGAAAACCAAGAGCTTCTCC
FD549058       <-- ..................................................
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> CAAGAAACTTCAGA....................................
FD545155       --> CAAGAAACTT........................................
EX768531       --> CAAGAAACTTCA......................................
EX899930       --> CAAGAAACTTCAGAGGCACGAGATACTGGCTGAAAACCAAGAGCTTCTCC
EV539723       --> CAAGAAACTTCAGAGGCACGAGATACTGGCTGAAAACCAAGAGCTTCTCC

               1551   -   1601
UN20050        --> CCTGCTGAGTCACACAGGTCTATCAAGTTTAGGAAGAACTTTGCTTTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- CCTGCTGAGTCACACAGGTCTATCAAGTTTAGGAAGAACTTTGCTTTCAC
EX764657       <-- CCTGCTGAGTCACACAGGTCTATCAAGTTCAGGAAGAACTTTGCTTTCAC
EX895922       <-- C-TGCTGAGTCACACAGGTCTATCAAGTTTAGGAAGAACTTTGCTTTCAC
FD549058       <-- ..................................................
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> CCTGCTGAGTCAC.....................................
EV539723       --> CCTGCTGAGTCACACAGGTCTATCAAGTTTAGGAAGAACTTTGCTTTCAC

               1601   -   1651
UN20050        --> GCCTTCATCCACATCTAGCTTCTCTAGCATTTCGTCCATAGTTGAATCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- GCCTTCATCCACATCTAGCTTCTCTAGCATTTCGTCCATAGTTGAATCAG
EX764657       <-- GCCTTCATCCACATCTAGCTTCTCTAGCATTTCGTCCATAGTTGAATCAG
EX895922       <-- GCCTTCATCCACATCTAGCTTCTCTAGCATTTCGTCCATAGTTGAATCAG
FD549058       <-- ..................................................
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> GCCTTCATCCACATCTAGCTTCTCTAGCATTTCGTCCATAGTTGAATCAG

               1651   -   1701
UN20050        --> ATACACTATCAGTCTTACTATCAGTCTTTTCAGAGAAAGCGTTCAGCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ATACACTATCAGTCTTACTATCAGTCTTTTCAGAGAAAGCGTTCAGCCTC
EX764657       <-- ct................................................
EX895922       <-- ATACACTATCAGTCTTACTATCAGTCTTTTCAGAGAAAGCGTTCAGCCTC
FD549058       <-- ..................................................
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ATACACTATCAGTCTTACTATCAGTCTTTTCAGAGAA.............

               1701   -   1751
UN20050        --> GGATGAAGGTAAATTGCACTCCCCACAGCCGAAACCTTGAATTTTCTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- GGATGAAGGTAAATTGCACTCCCCACAGCCGAAACCTTGAATTTTCTCTT
EX764657       <-- ..................................................
EX895922       <-- GGATGAAGGTAAATTGCACTCCCCACAGCCGAAACCTTGAATTTTCTCTT
FD549058       <-- ..................................................
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               1751   -   1801
UN20050        --> CTCACGCCTCAACTTCTTCACTTCAGTCAACTGCCTTGGAGACAGATTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- CTCACGCCTCAACTTCTTCACTTCAGTCAACTGCCTTGGAGACAGATTGA
EX764657       <-- ..................................................
EX895922       <-- CTCACGCCTCAACTTCTTCACTTCAGTCAACTGCCTTGGAGACAGATTGA
FD549058       <-- ........................................GACAGATTGA
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               1801   -   1851
UN20050        --> GAACCACAGTGAAATCATCAAGCCCAGGAAGCTCATCTAAGAAGTCTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- GAACCACAGTGAAATCATCAAGCCCAGGAAGCTCATCTAAGAAGTCTCCT
EX764657       <-- ..................................................
EX895922       <-- GAACCACAGTGAAATCATCAAGCCCAGGAAGCTCATCTAAGAAGTCTCCT
FD549058       <-- GAACCACAGTGAAATTGTCAAGCCCAGGAAGCTCATCTAAGAAGTCTCCC
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               1851   -   1901
UN20050        --> TTGTAGTAGTGAAGCACCTTCTTTGTCATCTCCCTCAAATCCTGGATCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- TTGTAGTAGTGAAGCACCTTCTTTGTCATCTCCCTCAAATCCTGGATCAT
EX764657       <-- ..................................................
EX895922       <-- TTGTAGTAGTGAAGCACCTTCTTTGTCATCTCCCTCAAATCCTGGGTCAT
FD549058       <-- TTGTAGTAGTGAAGCACCTTCTTTGTCATCTCCCTCAAATCCTGGATCAT
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               1901   -   1951
UN20050        --> GTTAATTTTCATCTTGAAATCCTCGCACTTCTGCAGCGTGTGCTCCACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- GTTAATTTTCATCTTGAAATCCTCGCACTTCTGCAGCGTGTGCTCCc...
EX764657       <-- ..................................................
EX895922       <-- GTTAATTTTCATCTTGAAATCCTCGCACTTCTGCAGCGTGTGCTCCACAA
FD549058       <-- GTTAATTTTCATCTTGAAATCCTCGCACTTCTGCAGTGTGTGCTCCACAA
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               1951   -   2001
UN20050        --> TTTCGTTGAAAGCCGAAGACACGTCTGAATTGCCTCCCAGATGAGACCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- TTTCGTTGAAAGCCGAAGAAACGTCTGAATTGCCTCCCAGATGAGACCTG
FD549058       <-- TTTCGTTGAAAGCCGAAGACACGTCTGAATTGCCTCCCAGATGAGACCTG
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               2001   -   2051
UN20050        --> ACAGCGGAGATAGGGGTACGACTCAGGATCCTTTTAACAATAGACTTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ACAGCGGAGATAGGGGTACGACTCAGGATCCTTTTAACAATAGACTTGGA
FD549058       <-- ACAGCGGAGATAGGGGCACGACTCAAGATCCTTTTAACAATAGACTTGGA
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               2051   -   2101
UN20050        --> GGTGTCCAACTTGAGGAACTTTGGTCGAACGAGGTTCAGAATGTTGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- GGTATCCAACTTGAGGAACTTTGGTCGAACGAGGTTCAGAATGTTGAAAA
FD549058       <-- GGTGTCCAACTTGAGGAACTTGGGTCGAACGAGGTTCAGAATGTTGAAAA
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               2101   -   2151
UN20050        --> CCTCCTTCACGTGGTTCTGATAAAGCGTTCCTGAGAGGACAACTTTCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- CCTCATTCACGTGGTTCTGATAAAGCGTTCCTGAGAGGAAAACTTTCCTT
FD549058       <-- CCTCCTTCACGTGGTTCTGATAAAGCGTTCCTGAGAGCACAACTTTCCTT
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               2151   -   2201
UN20050        --> GGTGTTTGGACTTGGGCAAGGGACTGCAATACATTTGTGTCCTCGTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- GGTGTTTGGACTTGGGCAAGGGACTGCAATACATTTGTGTCCTCGTTTCT
FD549058       <-- GGTGTTTGGACTTGGGCAAGGGACTGCAATACATTTGTGTCCTCGTTTCT
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               2201   -   2251
UN20050        --> TGGAGTGTGTCCTTCATCCAAAATGAGGATCGAAGGTACTTTCAGCAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- TGGAGTGTGc........................................
FD549058       <-- TGGAGTGTGTCCTTCATCCAAAATGAGGATCGAAGGTACTTTCAGCAATA
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               2251   -   2301
UN20050        --> TCTCCTGGCAAGAATGTGAGTAGGTACTTGTATCGTCACAGACAATGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ..................................................
FD549058       <-- TCTCCTGGCAAGAATGTGAGTAGGTACTTGTATCGTCACAGACAATGGTC
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               2301   -   2351
UN20050        --> GAGAACTGCTTGTAGCCCAGAAACAAAATACTCTTCTTCTCCATCCACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568832       <-- ..................................................
EX764657       <-- ..................................................
EX895922       <-- ..................................................
FD549058       <-- GAGAACTGCTTGTAGCCCAGAAACAAAATACTCTTCTTCTCCATCCACTG
EX765665       --> ..................................................
FD576315       --> ..................................................
EV573471       --> ..................................................
FD545155       --> ..................................................
EX768531       --> ..................................................
EX899930       --> ..................................................
EV539723       --> ..................................................

               2351   -   2401
UN20050        --> TTTCAAAATGGACAGC
                   ~~~~~~~~~~~~~~~~
EV568832       <-- ................
EX764657       <-- ................
EX895922       <-- ................
FD549058       <-- TTTCAAAATGGACAGC
EX765665       --> ................
FD576315       --> ................
EV573471       --> ................
FD545155       --> ................
EX768531       --> ................
EX899930       --> ................
EV539723       --> ................