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Alignment for radish unigene UN20065

               1      -     51
UN20065        --> CGGAAGGATTTGGATTGGTGCTGATTATATTAGTTACTACCAAACCTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569332       <-- ..................................................
FD978483       <-- ..................................................
EY906428       <-- ..................................................
EV536841       <-- ..................................................
EW734944       <-- ..................................................
EY905255       <-- ..................................................
FD979755       <-- ..................................................
EY914072       <-- ..................................................
EW734669       <-- ..................................................
EV537756       <-- ..................................................
FD550827       <-- ..................................................
FD540541       <-- ..................................................
FD559381       <-- ..................................................
EY931729       <-- ..................................................
EX896925       <-- ..................................................
EY905895       <-- ..................................................
FD541076       <-- ..................................................
FD555094       --> CGGAAGGATTTGGATTGGTGCTGATTATATTAGTTACTACCAAACCTTAA
FD975748       --> .GGAAGGATTTGGATTGGTGCTGATTATATTAGTTACTACCAAACCTTAA
EW738965       --> ......GATTTGGATTGGTGCTGATTATATTAGTTACTACCAAACCTTAA
FD546732       --> ...........GGATTGGTGCTGATTATATTAGTTACTACCAAACCTTAA
EY927611       --> ...........aGATTGGTGCTGATTATATTAGTTACTACCAAACCTTAA
FD537443       --> ................GGTGCTGATTATATTAGTTACTACCAAACCTTAA
EX900776       --> ...................................ACTACCAAACCTTAA
FD537028       --> ................................................AA
EW738559       --> .................................................A
EY902606       --> ................................................ag
EY901727       --> .................................................a
EY910190       --> ..................................................
EV541200       --> ..................................................

               51     -    101
UN20065        --> ACCATACAAAA-TATATTGATTTTTTTTT-AGTTCAAA-TTGAAACATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569332       <-- .............................ctagTCAAA-T-GAAACATAA
FD978483       <-- ..................................................
EY906428       <-- ..................................................
EV536841       <-- ..................................................
EW734944       <-- ..................................................
EY905255       <-- ..................................................
FD979755       <-- ..................................................
EY914072       <-- ..................................................
EW734669       <-- ..................................................
EV537756       <-- ..................................................
FD550827       <-- ..................................................
FD540541       <-- ..................................................
FD559381       <-- ..................................................
EY931729       <-- ..................................................
EX896925       <-- ..................................................
EY905895       <-- ..................................................
FD541076       <-- ..................................................
FD555094       --> ACCATACAAAAATATATTTATTTTTT-CT-AGTTCAAA-TTGAAACATAA
FD975748       --> ACCATACAAAA-TATATTGATTTTTTTTT-AGTTCAAA-TTGAAACATAA
EW738965       --> ACCATACAAAA-TATATTGATTTTTTTTT-AGTTCAAA-TTGAAACATAA
FD546732       --> ACCATACAAAA-TATATTGATTTTTTTTT-AGTTCAAA-TTGAAACATAA
EY927611       --> ACCATACAAAA-TATATTGATTTTTTTTT-AGTTCAAA-TTGAAACATAA
FD537443       --> ACCATACAAAA-TATATTGATTTTTTTTT-AGTTCAAAATTGAAACATAA
EX900776       --> ACCATACAAAA-TATATTGATTTTTTTTT-AGTTCAAA-TTGAAACATAA
FD537028       --> ACCATACAAAA-TATATTGATTTTTTTTTTAGTTCAAAATTGAAACATAA
EW738559       --> ACCATACAAAA-TATATTGATTTTTTTTT-AGTTCAAA-TTGAAACATAA
EY902606       --> ACCTTACAAAA-TATATTGATTTTTTTT--AGTTCAAA-TTGAAACATAA
EY901727       --> cCCATACAAAA-TATATTGATTTTTTTT--AGTTCAAAATTGAAACATAA
EY910190       --> cCCATACAAAA-TATATTGATTTTTTTT--AGTTCAAA-TTGAAACATAA
EV541200       --> ....aACAAAA-TATATTGATTTTTTTT--AGTTCAAA-TTGAAACATAA

               101    -    151
UN20065        --> TCTCTAACGATGAAAATCTCAAAATGTTATTTCAAGGTATCAGTATTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569332       <-- TCTCTAACGATGAAAATCTCAAAATGTTATTTCAAGGTATCAGTATTTCC
FD978483       <-- ..................................AGGTATCAGTATTT--
EY906428       <-- ..................................................
EV536841       <-- ..................................................
EW734944       <-- ..................................................
EY905255       <-- ..................................................
FD979755       <-- ..................................................
EY914072       <-- ..................................................
EW734669       <-- ..................................................
EV537756       <-- ..................................................
FD550827       <-- ..................................................
FD540541       <-- ..................................................
FD559381       <-- ..................................................
EY931729       <-- ..................................................
EX896925       <-- ..................................................
EY905895       <-- ..................................................
FD541076       <-- ..................................................
FD555094       --> TCTCTAACGATGAAAATCTCAAAATGTTATTTCAAGGTATCAGTATTTCT
FD975748       --> TCTCTAACGATGAAAATCTCAAAATGTTATTTCAAGGTATCAGTATTTCT
EW738965       --> TCTATAACGATGAAAATCTCAAAATGTTATTTCAAGGTATCAGTATTTCT
FD546732       --> TCTCTAACGATGAAAATCTCAAAATGTTATTTCAAGGTATCAGTATTTCT
EY927611       --> TCTCTAACGATGAAAATCTCAAAATGTTATTTCAAGGTATCAGTATTTCT
FD537443       --> TCTCTAACGATGAAAATCTCAAAATGTTATTTCAAGGTATCAGTATTTCT
EX900776       --> TCTCTAACGATGAAAATCTCAAAATGTTATTTCAAGGTATCAGTATTTCT
FD537028       --> TCTCTAACGATGAAAATCTCAAAATGTTATTTCAAGGTATCAGTATTTCT
EW738559       --> TCTCTAACGATGAAAATCTCAAAATGTTATTTCAAGGTATCAGTATTTCT
EY902606       --> TCTCTAACGATGAAAATCTCGAAATGTTATTTCAAGGTATCAGTATTTCT
EY901727       --> TCTCTAACGATGAAAATCTCAAAATGTTATTTCAAGGTATCAGTATTTCT
EY910190       --> TCTCTAACGATGAAAATCTCAAAATGTTATTTCAAGGTATCAGTATTTCT
EV541200       --> TCTCTAACGATGAAAATCTCAAAATGTTATTTCAAGGTATCAGTATTTCT

               151    -    201
UN20065        --> TCCCCTGAGCCAGGTTTACTCGAATGGCCCGACCCTCCAGCTCAAGCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569332       <-- TCCC-TGAGCCAGGTTTACTCGAATGGCCCGACCCTCCAGCTCAAGCCCA
FD978483       <-- -CTCCTGAGCCAGGTTTACTCGAATGGCCCGACCCTCCAGCTCAAGCCCA
EY906428       <-- .tCCCTGAGCCAGGTTTACTCGAATGGACCGACCCTCCAGCTCAAGCCCA
EV536841       <-- .................................CCTCCAGCTCAAGCCCA
EW734944       <-- ..................................CTCCAGCTCAAGCCCA
EY905255       <-- ......................................AGCTCAAGCCCA
FD979755       <-- .........................................TCAAGCCCA
EY914072       <-- .................................................A
EW734669       <-- ..................................................
EV537756       <-- ..................................................
FD550827       <-- ..................................................
FD540541       <-- ..................................................
FD559381       <-- ..................................................
EY931729       <-- ..................................................
EX896925       <-- ..................................................
EY905895       <-- ..................................................
FD541076       <-- ..................................................
FD555094       --> TCCCCTGAGCCAGGTTTACTCGAATGGCCCGACCCTCCAGCTCAAGCCCA
FD975748       --> TCCCCTGAGCCAGGTTGACTCGAATGGCCCGACCCTCCAGCTCAAGCCCA
EW738965       --> TCCCCTGAGCCAGGTTTACTCGAATGGCCCGACCCTCCAGCTCAAGCCCA
FD546732       --> TCCCCTGAGCCAGGTTTACTCGAATGGCCCGACCCTCCAGCTCAAGCCCA
EY927611       --> TCCCCTGAGCCAGGTTTACTCGAATGGCCCGACCCTCCAGCTCAAGCCCA
FD537443       --> TCCCCTGAGCCAGGTTTACTCGAATGGCCCGACCCTCCAGCTCAAGCCCA
EX900776       --> TCCCCTGAGCCAGGTTTACTCGAATGGCCCGACCCTCCAGCTCAAGCCCA
FD537028       --> TCCCCTGAGCCAGGTTTACTCGAATGGCCC-ACCCTCCAGCTCAAGCCCA
EW738559       --> TCCCCTGAGCCAGGTTTACTCGAATGGCCCGACCCTCCAGCTCAAGCCCA
EY902606       --> TCCCCTGAGCCAGGTTTACTCGAATGGACCGACCCTCCAGCTCAAGCCCA
EY901727       --> TCCCCTGAGCCAGGTTTACTCGAATGGCCCGACCCTCCAGCTCAAGCCCA
EY910190       --> TCCCCTGAGCCAGGTTTACTCGAATGGCCCGACCCTCCAGCTCAAGCCCA
EV541200       --> TCCCCTGAGCCAGGTTTACTCGAATGGCCCGACCCTCCAGCTCAAGCCCA

               201    -    251
UN20065        --> TCCAGCGACTCAAGAGCGGTTTCCATTTCAGCTTGGGAGGAGTAACATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569332       <-- TCCAGCGACTCAAGAGCGGTTTCCATTTCAGCTTTGGAGGAGTAACATAC  Raphanus raphanistrum subsp. landra
FD978483       <-- TCCAGCGATTCAAGAGCGGTTTCCATT-CAGCTTGGGAGGAGTAACATAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906428       <-- TCCAGCGATTCAAGAGCGGTTTCCATTTCAGCTTGGGAGGAGTAACATAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536841       <-- TCCAGCGA-TCAAGAGCG-TTTCCATT-CAGCTTGGGAGGAGTAACATAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW734944       <-- TCCAGCGACTCAAGAGCGGTT-CCATTTCAGCTTTGGAGGAGTAACATAC  Raphanus sativus cv Rat-Tail Radish #3870
EY905255       <-- TCCAGCGACTCAAGGGCGGTTTCCATTTCAGCTTGGGAGGAGTAACATAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979755       <-- TCCAGCGACTCAAGAGCGGTTTCCATTTCAGCTTTGGAGGAGTAACATAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914072       <-- TCCAGCGACTCAAGAGCGGTTTCCATTTCAGCTTTGGAGGAGTAACATAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734669       <-- ......GACTCAAGAGCGGTTTCCATTTCAGCTTTGGAGGAGTAACATAC  Raphanus sativus cv Rat-Tail Radish #3870
EV537756       <-- ........CTCAAGGGCGGTTTCCATTTCAGCTTGGGAGGAGTAACATAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD550827       <-- .................................................C  Raphanus raphanistrum subsp. raphanistrum (NY)
FD540541       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD559381       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY931729       <-- ..................................................  Raphanus sativus var. oleiformis
EX896925       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY905895       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541076       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555094       --> TCCAGCGACTCAAGAGCGGTTTCCATTTCAGCTTTGGAGGAGTAACATAC  Raphanus raphanistrum subsp. landra
FD975748       --> TCCAGCGACTCAAGAGCGGTTTCCATTTCAGCTTTGGAGGAGTAACATAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738965       --> TCCAGCGACTCAAGAGCGGTTTCCATTTCAGCTTTGGAGGAGTAACATAC  Raphanus sativus cv Rat-Tail Radish #3870
FD546732       --> TCCAGCGACTCAAGAGCGGTTTCCATTTCAGCTTTGGAGGAGTAACATAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY927611       --> TCCAGCGATTCAAGAGCGGTTTCCATTTCAGCTTGGGAGGAGTAACATAC  Raphanus sativus var. oleiformis
FD537443       --> TCCAGCGACTCAAGGGCGGTTTCCATTTCGGCTTGGGAGGAGTAACATAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900776       --> TCCAGCGATTCAAGAGCGGTTTCCATTTCAGCTTGGGAGGAGTAACATAC  Raphanus sativus cv Early Scarlet Globe
FD537028       --> TCCAGCGACTCAAGGGCGGTTTACATTTCAGCTTGGGAGGAGTAACATAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738559       --> TCCAGCGACTCAAGAGCGGTTTCCATTTCAGCTTTGGAGGAGTAACATAC  Raphanus sativus cv Rat-Tail Radish #3870
EY902606       --> TCCAGCGATTCAAGAGCGGTTTCCATTTCAGCTTGGGAGGAGTAACATAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901727       --> TCCAGCGACTCAAGGGCGGTTTCCATTTCAGCTTGGGAGGAGTAACATAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY910190       --> TCCAGCGACTCAAGAGCGGTTTCCATTTCAGCTTTGGAGGAGTAACATAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541200       --> TCCAGCGATTCAAGAGCGGTTTCCATTTCAGCTTGGGAGGAGTAACATAC  Raphanus raphanistrum subsp. raphanistrum (MS)

               251    -    301
UN20065        --> AAA-GCCATAACCTCTCGACTTCCCTGTGTCTCCATCGTACACAACTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569332       <-- AAAAGCCATAACCTCTCGACTTCCCTGTGTCTCCATCGTACACAACTCTG  Raphanus raphanistrum subsp. landra
FD978483       <-- AAA-GCCATAACCTCTTGACTTCCCGGTGTCTCCATCGTACACAACTCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906428       <-- AAA-GCCATAACCTCTTGACTTCCCAGTGTCTCCATCGTACACAACTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536841       <-- AAA-GCCATA-CCTCTTGACTTCCCAGTGTCTCCATCGTACACAACTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW734944       <-- AAA-GCCATAACCTCTCGACTTCC-TGTGTCTCCATCGTACACAACTCTG  Raphanus sativus cv Rat-Tail Radish #3870
EY905255       <-- AAA-GCCATAACCTCTCGACTTCCCGGTGTCTCCATCATACACAACTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979755       <-- AAG-GCCATAACCTCTCGACTTCCCTGTGTCTCCATCGTACACAACTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914072       <-- AAA-GCCATAACCTCTCGACTTCC-TGTGTCTCCATCGTACACAACTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734669       <-- AAA-GCCATAACCTCTCGACTTCCCTGTGTCTCCATCGTACACAACTCTG  Raphanus sativus cv Rat-Tail Radish #3870
EV537756       <-- AAA-GCCATAACCTCTCGACTTCCCGGTGTCTCCATCATACACAACTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD550827       <-- AAA-GCCATAACCTCTCGACTTCC-TGTGTCTCCATCGTACACAACTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD540541       <-- ..A-GCCATAACCTCTCGACTTCCCGGTGTCTCCATCATACACAACTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD559381       <-- ...............TCGACTTCC-TGTGTCTCCATCGTACACAACTCTG  Raphanus raphanistrum subsp. landra
EY931729       <-- ........................................CACAACTCTA  Raphanus sativus var. oleiformis
EX896925       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY905895       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541076       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555094       --> AAA-GCCATAACCTCTCGACTTCCCTGTGTCTCCATCGTACACAACTCTG  Raphanus raphanistrum subsp. landra
FD975748       --> AAG-GCCATAACCTCTCGACTTCCCTGTGTCTCCATCGTACACAACTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738965       --> AAA-GCCATAACCTCTCGACTTCCCTGTGTCTCCATCGTACACAACTCTG  Raphanus sativus cv Rat-Tail Radish #3870
FD546732       --> AAA-GCCATAACCTCTCGACTTCCCTGTGTCTCCATCGTACACAACTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY927611       --> AAA-GCCATAACCTCTTGACTTCCCGGTGTCTCCATCGTACACAACTCTA  Raphanus sativus var. oleiformis
FD537443       --> AAA-GCCATAACCTCTCGACTTCCCGGTGTCTCCATCATACACAACTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900776       --> AAA-GCCATAACCTCTTGACTTCCCGGTGTCTCCATCGTACACAACTCTA  Raphanus sativus cv Early Scarlet Globe
FD537028       --> AAA-GCCATAACCTCTCGACTTCCCGGTGTCTCCATCATACACAACTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738559       --> AAA-GCCATAACCTCTCGACTTCCCTGTGTCTCCATCGTACACAACTCTG  Raphanus sativus cv Rat-Tail Radish #3870
EY902606       --> AAA-GCCATAACCTCTTGACTTCCCAGTGTCTCCATCGTACACAACTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901727       --> AAA-GCCATAACCTCTCGACTTCCCGGTGTCTCCATCATACACAACTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY910190       --> AAA-GCCATAACCTCTCGACTTCCCTGTGTCTCCATCGTACACAACTCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541200       --> AAA-GCCATAACCTCTTGACTTCCCAGTGTCTCCATCGTACACAACTCTG  Raphanus raphanistrum subsp. raphanistrum (MS)

               301    -    351
UN20065        --> GCACCAACCACTTCTCCGCACTCTCGAAACGCTCCAGCTAATGACTCCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569332       <-- GCACCAACCACTTCTCCGCACTCCCGAAACGCTCCAGCTAATGACTCCGA  Raphanus raphanistrum subsp. landra
FD978483       <-- GCACCAACCACTTCTCCGCACTCCCGAAACGCTCCAGCTAATGACTCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906428       <-- GCACCAACCACTTCTCCGCACTCTCGAAACGCTCCAGCTAATGACTCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536841       <-- GCACCAACCACTTCTCCGCACTCTCGAAACGCTCCAGCTAATGACTCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW734944       <-- GCACCAACCACTTCTCCGCACTCTCGAAACGCTCCAGCTAATGACTCCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY905255       <-- GCACCAACCACTTCTCCGCACTCTCGAAACGCTCCAGCTAATGACTCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979755       <-- GCACCAACCACTTCTCCGCACTCTCGAAACGCTCCAGCTAATGACTCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914072       <-- GCACCAACCACTTCTCCGCACTCTCGAAACGCTCCAGCTAATGACTCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734669       <-- GCACCAACCACTTCTCCGCACTCTCGAAACGCTCCAGCTAGTGACTCCGA  Raphanus sativus cv Rat-Tail Radish #3870
EV537756       <-- GCACCAACCACTTCTCCGCACTCTCGAAACGCTCCAGCTAATGACTCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD550827       <-- GCACCAACCACTTCTCCGCACTCTCGAAACGCTCCAGCTAATGACTCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD540541       <-- GCACCAACCACTTCTCCGCACTCTCGAAACGCTCCAGCTAATGACTCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD559381       <-- GCACCAACCACTTCTCCGCACTCCCGAAACGCTCCAGCTAATGACTCCGA  Raphanus raphanistrum subsp. landra
EY931729       <-- GCACCAACCACTTCTCCGCACTCCCGAAACGCTCCAGCTAACGACTCCGA  Raphanus sativus var. oleiformis
EX896925       <-- ..gcacACCACTTCTC-GCACTC-CGAAACGCTCCAGCTA-TGACTC-GA  Raphanus sativus cv Early Scarlet Globe
EY905895       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541076       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555094       --> GCACCAACCACTTCTCCGCACTCCCGAAACGCTCCAGCTAATGACTCCGA  Raphanus raphanistrum subsp. landra
FD975748       --> GCACCAACCACTTCTCCGCACTCTCGAAACGCTCCAGCTAATGACTCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738965       --> GCACCAACCACTTCTCCGCACTCTCGAAACGCTCCAGCTAGTGACTCCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD546732       --> GCACCAACCACTTCTCCGCACTCTCGAAACGCTCCAGCTAATGACTCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY927611       --> GCACCAACCACTTCTCCGCACTCCCGAAACGCTCCAGCTAACGACTCCGA  Raphanus sativus var. oleiformis
FD537443       --> GCACCAACCACTTCTCCGCACTCTCGAAACGCTCCAGCTAATGACTCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900776       --> GCACCAACCACTTCTCCGCACTCCCGAAACGCTCCAGCTAATGACTCCGA  Raphanus sativus cv Early Scarlet Globe
FD537028       --> GCACCAACCACTTCTCCGCACTCTCGAAACGCTCCAGCTAATGACTCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738559       --> GCACCAACCACTTCTCCGCACTCTCGAAACGCTCCAGCTAATGACTCCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY902606       --> GCACCAACCACTTCTCCGCACTCTCGAAACGCTCCAGCTAATGACTCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901727       --> GCACCAACCACTTCTCCGCACTCTCGAAACGCTCCAGCTAATGACTCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY910190       --> GCACCAACCACTTCTCCGCACTCTCGAAACGCTCCAGCTAATGACTCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541200       --> GCACCAACCACTTCTCCGCACTCTCGAAACGCTCCAGCTAATGACTCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)

               351    -    401
UN20065        --> AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569332       <-- AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
FD978483       <-- AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
EY906428       <-- AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
EV536841       <-- AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
EW734944       <-- AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
EY905255       <-- AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
FD979755       <-- AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
EY914072       <-- AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
EW734669       <-- AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
EV537756       <-- AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
FD550827       <-- AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
FD540541       <-- AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
FD559381       <-- AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
EY931729       <-- AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
EX896925       <-- AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
EY905895       <-- ..................................................
FD541076       <-- ..................................................
FD555094       --> AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
FD975748       --> AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
EW738965       --> AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
FD546732       --> AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
EY927611       --> AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
FD537443       --> AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
EX900776       --> AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
FD537028       --> AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
EW738559       --> AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
EY902606       --> AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
EY901727       --> AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
EY910190       --> AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG
EV541200       --> AGTGACTGTCCACGACAAGTTACCAACAAACAGCTTGTACTCTGTTTCTG

               401    -    451
UN20065        --> GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569332       <-- GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
FD978483       <-- GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
EY906428       <-- GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
EV536841       <-- TATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
EW734944       <-- GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
EY905255       <-- GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
FD979755       <-- GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
EY914072       <-- GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
EW734669       <-- GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
EV537756       <-- GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
FD550827       <-- GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
FD540541       <-- GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
FD559381       <-- GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
EY931729       <-- GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
EX896925       <-- GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
EY905895       <-- .........................................TTCACCTTC
FD541076       <-- ..................................................
FD555094       --> GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
FD975748       --> GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
EW738965       --> GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
FD546732       --> GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
EY927611       --> GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
FD537443       --> GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
EX900776       --> GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
FD537028       --> GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
EW738559       --> GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
EY902606       --> GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
EY901727       --> GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
EY910190       --> GATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC
EV541200       --> TATACAGAGGTTCTTTGTTTGGTTTTGGTTTGTCTGCAAAGTTCACCTTC

               451    -    501
UN20065        --> AAAGTCCTACCAAGATACTCAGTTCCATCGAGGTTCTCGATGATGACGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569332       <-- AAAGTCCTACCAAGATACTCAGTTCCATCGAGGTTCTCGATGATGACGTT  Raphanus raphanistrum subsp. landra
FD978483       <-- AAAGTCCTACCAAGATACTCAGTTCCATCGAGGTTCTCGATGATGACGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906428       <-- GAAGTCCTACCAAGATACTCAGTTCCATCGAGGTTCTCAATGATGACGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536841       <-- AAAGTCCTACCAAGATACTCAGTTCCATCGAGGTTCTCAATGATGACGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW734944       <-- AAAGTCCTACCAAGATACTCAGTTCCATCAAGGTTCTCGATGATGACGTT  Raphanus sativus cv Rat-Tail Radish #3870
EY905255       <-- AAAGTCCTACCAAGATACTCAGTTCCATCGAGGTTCTCAATGATGACGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979755       <-- AAAGTCCTACCAAGATACTCAGTTCCATCAAGGTTCTCGATGATGACGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914072       <-- AAAGTCCTACCAAGATACTCAGTTCCATCAAGGTTCTCGATGATGACGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734669       <-- AAAGTCCTACCAAGATACTCAGTTCCATCAAGGTTCTCGATGATGACGTT  Raphanus sativus cv Rat-Tail Radish #3870
EV537756       <-- AAAGTCCTACCAAGATACTCAGTTCCATCGAGGTTCTCAATGATGACGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD550827       <-- AAAGTCCTACCAAGATACTCAGTTCCATCAAGGTTCTCGATGATGACGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD540541       <-- AAAGTCCTACCAAGATACTCAGTTCCATCGAGGTTCTCAATGATGACGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD559381       <-- AAAGTCCTACCAAGATACTCAGTTCCATCGAGGTTCTCGATGATGACGTT  Raphanus raphanistrum subsp. landra
EY931729       <-- AAAGTCCTACCAAGATACTCAGTTCCATCGAGGTTCTCGATGATGACGTT  Raphanus sativus var. oleiformis
EX896925       <-- AAAGTCCTACCAAGATACTCAGTTCCATCGAGGTTCTCGATGATGACGTT  Raphanus sativus cv Early Scarlet Globe
EY905895       <-- AAAGTCCTACCAAGATACTCAGTTCCATCGAGGTTCTCAATGATGACGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541076       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555094       --> AAAGTCCTACCAAGATACTCAGTTCCATCGAGGTTCTCGATGATGACGTT  Raphanus raphanistrum subsp. landra
FD975748       --> AAAGTCCTACCAAGATACTCAGTTCCATCAAGGTTCTCGATGATGACGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738965       --> AAAGTCCTACCAAGATACTCAGTTCCATCAAGGTTCTCGATGATGACGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD546732       --> AAAGTCCTACCAAGATACTCAGTTCCATCAAGGTTCTCGATGATGACGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY927611       --> AAAGTCCTACCAAGATACTCAGTTCCATCGAGGTTCTCGATGATGACGTT  Raphanus sativus var. oleiformis
FD537443       --> AAAGTCCTACCAAGATACTCAGTTCCATCGAGGTTCTCAATGATGACGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900776       --> AAAGTCCTACCAAGATACTCAGTTCCATCGAGGTTCTCGATGATGACGTT  Raphanus sativus cv Early Scarlet Globe
FD537028       --> AAAGTCCTACCAAGATACTCAGTTCCATCGAGGTTCTCAATGATGACGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738559       --> AAAGTCCTACCAAGATACTCAGTTCCATCAAGGTTCTCGATGATGACGTT  Raphanus sativus cv Rat-Tail Radish #3870
EY902606       --> GAAGTCCTACCAAGATACTCAGTTCCATCGA...................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901727       --> AAAGTCCTACCAAGATACTCAGTTCCATCGAGGTTCTCAATGATGACGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY910190       --> AAAGTCCTACCAAGATACTCAGTTCCATCAAGGTTCTCGATGATGACGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541200       --> AAAGTCCTACCAAGATACTCAGTTCCATCGAGGTTCTCAATGATGACGTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               501    -    551
UN20065        --> GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569332       <-- GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus raphanistrum subsp. landra
FD978483       <-- GCAGTCTTCGACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906428       <-- GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536841       <-- GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW734944       <-- GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus sativus cv Rat-Tail Radish #3870
EY905255       <-- GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979755       <-- GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914072       <-- GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734669       <-- GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus sativus cv Rat-Tail Radish #3870
EV537756       <-- GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD550827       <-- GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD540541       <-- GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD559381       <-- GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus raphanistrum subsp. landra
EY931729       <-- GCAGTCTTCGACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus sativus var. oleiformis
EX896925       <-- GCAGTCTTCGACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus sativus cv Early Scarlet Globe
EY905895       <-- GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541076       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555094       --> GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus raphanistrum subsp. landra
FD975748       --> GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738965       --> GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD546732       --> GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY927611       --> GCAGTCTTCGACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus sativus var. oleiformis
FD537443       --> GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900776       --> GCAGTCTTCGACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus sativus cv Early Scarlet Globe
FD537028       --> GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738559       --> GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus sativus cv Rat-Tail Radish #3870
EY902606       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901727       --> GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY910190       --> GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541200       --> GCAGTCTTCCACGTTGCTCATTGTCACAAAGGCGAACCCACGACTCTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN20065        --> CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGGGGTTAGCGAAGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569332       <-- CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGGGGTTAGCGAAGTCT  Raphanus raphanistrum subsp. landra
FD978483       <-- CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGGGGTTAGCGAAGTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906428       <-- CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGGGGTTTGCGAAGTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536841       <-- CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGGGGTTTGCGAAGTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW734944       <-- CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGGAGTTAGCGAAGTCT  Raphanus sativus cv Rat-Tail Radish #3870
EY905255       <-- CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGGGGTTTGCGAAGTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979755       <-- CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGGGGTTAGCGAAGTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914072       <-- CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGAGGTTAGCGAAGTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734669       <-- CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGGGGTTAGCGAAGTCT  Raphanus sativus cv Rat-Tail Radish #3870
EV537756       <-- CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGGGGTTTGCGAAGTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD550827       <-- CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGGGGTTAGCGAAGTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD540541       <-- CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGGGGTTTGCGAAGTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD559381       <-- CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGGGGTTAGCGAAGTCT  Raphanus raphanistrum subsp. landra
EY931729       <-- CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGGGGTTAGCGAAGTCT  Raphanus sativus var. oleiformis
EX896925       <-- CTGTGTCTCTGTTGCAAAGAACCTCGACGAGCTCGGGGTTAGCGAAGTCT  Raphanus sativus cv Early Scarlet Globe
EY905895       <-- CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGGGGTTTGCGAAGTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541076       <-- ...........................CGAGCTCGGG-TTTGCGAAGT-T  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555094       --> CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGGGGTTAGCGAAGTCT  Raphanus raphanistrum subsp. landra
FD975748       --> CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGGGGTTAGCGAAGTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738965       --> CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGGGGTTAGCGAAGTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD546732       --> CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGGGGTTAGCGAAGTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY927611       --> CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGGGGTTAGCGAAGTCT  Raphanus sativus var. oleiformis
FD537443       --> CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGGGGTTTGCGAAGTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900776       --> CTGTGTCTCTGTTGCAAAGAACCTCGACGAGCTCGGGGTTAGCGAAGTCT  Raphanus sativus cv Early Scarlet Globe
FD537028       --> CTGTGTCTCTGTTGTAAAGAAC............................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738559       --> CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGGAGTTAGCGAAGTCT  Raphanus sativus cv Rat-Tail Radish #3870
EY902606       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901727       --> CTGTGTCTCTGTTGTAAAGAACCT..........................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY910190       --> CTGTGTCTCTGTTGTAAAGAACC...........................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541200       --> CTGTGTCTCTGTTGTAAAGAACCTCGACGAGCTCGGGGTTTGCGAAGTCT  Raphanus raphanistrum subsp. raphanistrum (MS)

               601    -    651
UN20065        --> TGGATGATCTGAGCGAGTGTTGCACTGTCAACATTGTAAGGCAGGTTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569332       <-- TGGATGATCTGAGCGAGTGTTGCACTGTCAACATTGTAAGGCAGGTTCCC  Raphanus raphanistrum subsp. landra
FD978483       <-- TGGATGATCTGAGCGAGTGTTGCACTGTCAACATTGTACGGCAGGTTCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906428       <-- TGGATGATCTGAGCGAGTGTTGCACTGTCAACCTTGTAAGGCAGGTTCCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536841       <-- TGGATGATCTGAGCGAGTGTTGCACTGTCAACATTGTAAGGCAGGTTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW734944       <-- TGGATGATCTGAGCGAGTGTTGCACTGTCAACATTGTAAGGCAGGTTCCC  Raphanus sativus cv Rat-Tail Radish #3870
EY905255       <-- TGGATGATCTGAGCGAGCGTTGCACTGTCAACATTGTAAGGCAGGTTCCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979755       <-- TGGATGATCTGAGCGAGTGTTGCACTGTCAACATTGTAAGGCAGGTTCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914072       <-- TGGATGATCTGAGCGAGTGTTGCACTGTCAACATTGTAAGGCAGGTTCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734669       <-- TGGATGATCTGAGCGAGTGTTGCACTGTCAACATTGTAAGGCAGGTTCCC  Raphanus sativus cv Rat-Tail Radish #3870
EV537756       <-- TGGATGATCTGAGCGAGCATTGCACTGTCAACATTGTAAGGCAGGTTCCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD550827       <-- TGGATGATCTGAGCGAGTGTTGCACTGTCAACATTGTAAGGCAGGTTCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD540541       <-- TGGATGATCTGAGCGAGCGTTGCACTGTCAACATTGTAAGGCAGGTTCCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD559381       <-- TGGATGATCTGAGCGAGTGTTGCACTGTCAACATTGTAAGGCAGGTTCCC  Raphanus raphanistrum subsp. landra
EY931729       <-- TGGATGATCTGAGCGAGTGTTGCACTGTCAACATTGTACGGCAGGTTCCC  Raphanus sativus var. oleiformis
EX896925       <-- TGGATGATCTGAGCGAGTGTTGCACTGTCAACATTGTACGGCAGGTTCCC  Raphanus sativus cv Early Scarlet Globe
EY905895       <-- TGGATGATCTGAGCGAGCGTTGCACTGTCAACATTGTAAGGCAGGTTCCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541076       <-- TGGATGATCTGAGCGAGCG-TGCACTGTCAACATTGTAAGGCAGGTTCCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555094       --> TGGATGATCTGAGCGAGTGTTGCACTGTCAACATTGTAAGGCAGGTTCCC  Raphanus raphanistrum subsp. landra
FD975748       --> TGGATGATCTGAGCGAGTGTTGCACTGTCAACATTGTAAGGCAGGTTCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738965       --> TGGATGATCTGAGCGAGTGTTGCACTGTCAACATTGTAAGGCAGGTTCCC  Raphanus sativus cv Rat-Tail Radish #3870
FD546732       --> TGGATGATCTGAGCGAGTGTTGCACTGTCAACATTGTAAGGCAGGTTCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY927611       --> TGGATGATCTGAGCGAGTGTTGCACTGTCAACATTGTACGGCAGGTTCCC  Raphanus sativus var. oleiformis
FD537443       --> TGGATGATCTGAGCGAGCGTTGCACTGTCAACATTGTAAGGCAGGTTCCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900776       --> TGGATGATCTGAGCGAGTGTTGCACTGTCAACATTGTACGGCAGGTTCCC  Raphanus sativus cv Early Scarlet Globe
FD537028       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738559       --> TGGATGATCTGAGCGAGTGTTGCACTGTCAACATTGTAAGGCAGGTTCCC  Raphanus sativus cv Rat-Tail Radish #3870
EY902606       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901727       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY910190       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541200       --> TGGATGATCTGAGCGAGTGTTGCACTGTCAACATTGTAAGGCAGGTTTCC  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN20065        --> AAAGTAGAGCTTAGTGTTGATGGTCGCAGGAGGATTGTCGTCATCAGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569332       <-- AAAGTAGAGCTTAGTGTTGATGGTCGCAGGAGGATTGTCGTCATCAGCAG
FD978483       <-- AAAGTAGGGCTTAGTGTTGATGGTCGCAGGAGGATTGTCGTCATCAGCAG
EY906428       <-- AAAGTAGAGCTTAGTGTTGATGGTCGCAGGAGGATCGTCGTCATCAGCAG
EV536841       <-- AAAGTAGAGCTTAGTGTTGATGGTCGCAGGAGGATCGTCGTCATCAGCAG
EW734944       <-- GAAGTAGAGCTTAGTGTTGATGGTCGCAGGAGGATTGTCGTCATCAGCAG
EY905255       <-- AAAGTAGAGCTTAGTGTTGATGGTCGCAGGAGGATTGTAGTCATC---AG
FD979755       <-- GAAGTAGAGCTTAGTGTTGATGGTCGCAGGAGGATTGTCGTCATCAGCAG
EY914072       <-- GAAGTAGAGCTTAGTGTTGATGGTCGCAGGAGGATTGTCGTCATCCGCAG
EW734669       <-- GAAGTAGAGCTTAGTGTTGATGGTCGCAGGAGGATTGTCGTCATCAGCAG
EV537756       <-- AAAGTAGAGCTTAGTGTTGATGGTCGCAGGAGGATTGTCGTCATCAGCAG
FD550827       <-- GAAGTAGAGCTTAGTGTTGATGGTCGCAGGAGGATTGTCGTCATCAGCAG
FD540541       <-- AAAGTAGAGCTTAGTGTTGATGGTCGCAGGAGGATTGTCGTCATCAGCAG
FD559381       <-- AAAGTAGAGCTTAGTGTTGATGGTCGCAGGAGGATTGTCGTCATCAGCAG
EY931729       <-- AAAGTAGAGCTTAGTGTTGATGGTCGCAGGAGGATTGTCGTCATCAGCAG
EX896925       <-- AAAGTAGAGCTTAGTGTTGATGGTCGCAGGAGGATTGTCGTCATCAGCAG
EY905895       <-- AAAGTAGAGCTTAGTGTTGATGGTCGCAGGAGGATTGTCGTCATCAGCAG
FD541076       <-- AAAGTAGAGCTTAGTGTTGATGGTCGCAGGAGGATTGTCGTCATCAGCAG
FD555094       --> AAAGTAGAGCTTAGTGTTGATGGTCGCAGGAGGATTGTCGTCATCAGCAG
FD975748       --> GAAGTAGAGCTTAGTGTTGATGGTCGCAGGAGGATTGTCGTCATCAGCA.
EW738965       --> GAAGTAGAGCTTAGTGTTGATGGTCGCAGGAGGATTGTCGTCATCAGCAG
FD546732       --> GAAGTAGAGCTTAGTGTTGATGGTCGCAGGAGGATTGTCGTCATCAGCAG
EY927611       --> AAAGTAGAGCTTAGTGTTGATGGT..........................
FD537443       --> AAAGTAGAGCTTAGTGTTGATGGTCGC.......................
EX900776       --> AAAGTAGA..........................................
FD537028       --> ..................................................
EW738559       --> GAAGTAGAGCTTAGTGTTGATGGTCGCAGGAGGATTGTCGTCATCAGCAG
EY902606       --> ..................................................
EY901727       --> ..................................................
EY910190       --> ..................................................
EV541200       --> AAAGTAGAGCTTAGTGTTGATGGTCGCAGGAGGATCGTCGTCATCAGCAG

               701    -    751
UN20065        --> TCGTGTCGTCCTGTTTGACGGCAATGGTCTCAGGCAGGGCTTTGAATCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569332       <-- TCGTGTCGTCCTGTTTGACGGCAATGGTCTCAGGCAGGGCTCTGAATCGC  Raphanus raphanistrum subsp. landra
FD978483       <-- TCGTGTCGTCCTGTTTGACGGCAATGGTCTCAGGCAGGGCTCTGAATCGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906428       <-- TTGTGTCGTCCTGTTTGAGGGCAATGGTCTCAGGCAGGGCTTTGAATCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536841       <-- TTGTGTCGTCCTGTTTGAGGGCAATGGTCTCAGGCAGGGCTTTGAATCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW734944       <-- TCGTGTCGTCCTGTTTGACGGCAATGGTCTCCGGCAGGGCTTTGAATCGC  Raphanus sativus cv Rat-Tail Radish #3870
EY905255       <-- TTGTGTCGTCCTGTTTGACGGCAATGGTCTCAGGCAGGGCTTTGAATCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979755       <-- TCGTGTCGTCCTGTTTGACGGCAATGGTCTCCGGCAGGGCTTTGAATCGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914072       <-- TCGTGTCGTCCTGTTTGACGGCAATGGTCTCCGGCAGGGCTTTGAATCGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734669       <-- TCGTGTCGTCCTGTTTGACGGCAATGGTCTCCGGCAGGGCTTTGA-TCGC  Raphanus sativus cv Rat-Tail Radish #3870
EV537756       <-- TTGTGTCGTCCTGTTTGACGGCAATGGTCTCAGGCAGGGCTTTGAATCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD550827       <-- TCGTGT--CCCTGTTTGACGGCAATGGTCTCCGGCAGGGCTTTGAATCGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD540541       <-- TTGTGTCGTCCTGCTTGACGGCAATGGTCCCAGGCAGGGCTTTGAATCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD559381       <-- TCGTGTCGTCCTGTTTGACGGCAATGGTCTCAGGCAGGGCTCTGAATCGC  Raphanus raphanistrum subsp. landra
EY931729       <-- TCGTGTCGTCCTGTTTGACGGCAATGGTCTCAGGCAGGGCTCTGAATCGC  Raphanus sativus var. oleiformis
EX896925       <-- TCGTGTCGTCCTGTTTGACGGCAATGGTCTCAGGCAGGGCTCTGAATCGC  Raphanus sativus cv Early Scarlet Globe
EY905895       <-- TTGTGTCGTCCTGTTTGACGGCAATGGTCTCAGGCAGGGCTTTGAATCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541076       <-- TTGTGTCGTCCTGTTTGACGGCAATGGTCTCAGGCAGGGCTTTGAATCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555094       --> TCGTGTCGTCCTGTTTG.................................  Raphanus raphanistrum subsp. landra
FD975748       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738965       --> TCGTGTCGTCCTGTTTGACGGCAATGGTC.....................  Raphanus sativus cv Rat-Tail Radish #3870
FD546732       --> TCGTGTC--CCTGTTTGACGGCAATGGTCTCCGGCAGGGCTTTGAATCGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY927611       --> ..................................................  Raphanus sativus var. oleiformis
FD537443       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900776       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD537028       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738559       --> TCGTGTCGTCCTGTTTGACGGCAATGGTCTCCGGCAGGGCTTTGAATCGC  Raphanus sativus cv Rat-Tail Radish #3870
EY902606       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901727       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY910190       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541200       --> TTGTGTCGTCCTGTTTGAGGGCAATGGTCTCAGGCAGGGCTTTGAATCGC  Raphanus raphanistrum subsp. raphanistrum (MS)

               751    -    801
UN20065        --> TGAGAACTGTTGTTGTCACGTGAGGAGATCAAGAGAGGCTTTGGAGGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569332       <-- TGAGAACTATTGTTGTCACGTGAGGAGATTAAGAGAGGCTTTGGAGGCGA  Raphanus raphanistrum subsp. landra
FD978483       <-- TGAGAACTATTGTTGTCACGTGAGGAGATCAAGAGAGGCTTTGGAGGCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906428       <-- TGAGAACTGTTGTTGTCACGTGAGGAGATCAAGAGAGGCTTTGGAGGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536841       <-- TGAGAACTGTTGTTGTCACGTGAGGAGATCAAGAGAGGCTTTGGAGGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW734944       <-- TGAGAACTGTTGTTGTCACGTGAGGAGATCAAGAGAGGCTTTGGAGGCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY905255       <-- TGAGAACTGTTGTTGTCACGTGAGGAGATCAAGAGAGGCTTTGGAGGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD979755       <-- TGAGAACTGTTGTTGTCACGTGAGGAGATCAAGAGAGGCTTTGGAGGCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914072       <-- TGAGAACTGTTGTTGTCACGTGAGGAGATCAAGAGAGGCTTTGGAGGCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734669       <-- TGAGAACTGTTGTTGTCACGTGAGGAGATCAAGAGAGGCTTTGGAGGCGA  Raphanus sativus cv Rat-Tail Radish #3870
EV537756       <-- TGAGAACTGTTGTTGTCACGTGAGGAGATCAAGAGAGGCTTTGGAGGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD550827       <-- TGAGAACTGTTGTTGTCACGTGAGGAGATCAAGAGAGGCTTTGGAGGCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD540541       <-- TGAGAACTGTTGTTGTCACGTGAGGAGATCAAGAGAGGCTTTGGAGGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD559381       <-- TGAGAACTATTGTTGTCACGTGAGGAGATTAAGAGAGGCTTTGGAGGCGA  Raphanus raphanistrum subsp. landra
EY931729       <-- TGAGAACTATTGTTGTCACGTGAGGAGATCAAGGGAGGCTTTGGAGGCGA  Raphanus sativus var. oleiformis
EX896925       <-- TGAGAACTATTGTTGTCACGTGAGGAGATCAAGAGAGGCTTTGGAGGCGA  Raphanus sativus cv Early Scarlet Globe
EY905895       <-- TGAGAACTGTTGTTGTCACGTGAGGAGATCAAGAGAGGCTTTGGAGGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541076       <-- TGAGAACTGTTGTTGTCACGTGAGGAGATCAAGAGAGGCTTTGGAGGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD555094       --> ..................................................  Raphanus raphanistrum subsp. landra
FD975748       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738965       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD546732       --> TGAGAACTGTTGTTGTCACGTGAGGAGATCAAGAGAG-CTTTGG......  Raphanus raphanistrum subsp. raphanistrum (NY)
EY927611       --> ..................................................  Raphanus sativus var. oleiformis
FD537443       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900776       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD537028       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW738559       --> TGAGAACTGTTGTTGTCACGTGAGGAGATCAAGAGAGGCTTTGGAGGCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY902606       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY901727       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY910190       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV541200       --> TGAGAACTGTTGTTGTCACGTGAGGAGATCAAGAGAGGCTTTGGAGGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)

               801    -    851
UN20065        --> CAAGTTGAATCTAAGAAGTGTTTGGTTAGATGATTTGTTGCAGCGAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569332       <-- CAAGTTGAATCTAAGAAGTGTTTGGTTAGATGATTTGTTGCAACGAAGGA
FD978483       <-- CAAGTTGAATCTAAGAAGTGTTTGGTTAGATGATTTGTTGCAGCGAAGGA
EY906428       <-- CAAGTTGAATCTAAGAAGTGTTTGGTTAGATGATTTGTTGCAGCc.....
EV536841       <-- CAAGTTGAATCTAAGAAGTGTTTGGTTAGATGATTTGTTGCAGCGAAGGA
EW734944       <-- CAAGTTGAATCTAAGAAGTGTTTGGTTAGATGATTTGTTGCAGCGAAGGA
EY905255       <-- CAAGTTGAATCTAAGAAGTGTTTGGTTAGATGATTTGTTGCAGCGAAGGA
FD979755       <-- CAAGTTGAATCTAAGAAGTGTTTGGTTAGATGATTTGTTGCAGCGAAGGA
EY914072       <-- CAAGTTGAATCTAAGAAGTGTTTGGTTAGATGATTTGTTGCAGCGAAGGA
EW734669       <-- CAAGTTGAATCTAAGAAGTGTTTGGTTAGATGATTTGTTGCAGCGAAGGA
EV537756       <-- CAAGTTGAATCTAAGAAGTGTTTGGTTAGATGATTTGTTGCAGCGAAGGA
FD550827       <-- CAAGTTGAATCTAAGAAGTGTTTGGTTAGATGATTTGTTGCAGCGAAGGA
FD540541       <-- CAAGTTGAATCTAAGAAGTGTTTGGTTAGATGATTTGTTGCAGCGAGGGA
FD559381       <-- CAAGTTGAATCTAAGAAGTGTTTGGTTAGATGATTTGTTGCAACGAAGGA
EY931729       <-- CAAGTTGAATCTAAGAAGTGTTTGGTTAGATGATTTGTTGCAGCGAAGGA
EX896925       <-- CAAGTTGAATCTAAGAAGTGTTTGGTTAGATGATTTGTTGCAGCGAAGGA
EY905895       <-- CAAGTTGAATCTAAGAAGTGTTTGGTTAGATGATTTGTTGCAGCGAAGGA
FD541076       <-- CAAGTTGAATCTAAGAAGTGTTTGGTTAGATGATTTGTTGCAGCGAAGGA
FD555094       --> ..................................................
FD975748       --> ..................................................
EW738965       --> ..................................................
FD546732       --> ..................................................
EY927611       --> ..................................................
FD537443       --> ..................................................
EX900776       --> ..................................................
FD537028       --> ..................................................
EW738559       --> CAAGTTGAATCTAAGAAGTGTTTGGTTAGATGATTTGTTGCAGCGAA...
EY902606       --> ..................................................
EY901727       --> ..................................................
EY910190       --> ..................................................
EV541200       --> CAAGTTGAATCTAAGAAGTGTTTGGTTAGATGATTTGTTGCAGCG.....

               851    -    901
UN20065        --> GGAGGGTTGGTTGATCGTAGAGTTTGAAGCAGGGAAGTGTTAGTGTTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569332       <-- GGAGGGTTGGTTGATCGTAGAGTTTGAAGCAGGGAAGTGTTAGTGTTGAA
FD978483       <-- GGAGGGTTGGTTGATCGTAGAGTTTGAAGC....................
EY906428       <-- ..................................................
EV536841       <-- GGAGGGTTGGTTGATCGTAGAGTTTGAAGCAGGGAAGTGTTAGTGTTGAA
EW734944       <-- GGAGGGTTGGTTGATCGTAGAGTTTGAAGCAGGGAAGTGTTAGTGTTGAA
EY905255       <-- GGAGGGTTGGTTGATCGTAGAGTTTGAAGCAGGGAAGTGTTAGTGTTGAA
FD979755       <-- GGAGGGTTGGTTGATCGTAGAGTTTGAAGCAGGGAAGTGTTAGTGTTGAA
EY914072       <-- GGAGGGTTGGTTGATCGTAGAGTTTGAAGCAGGGAAGTGTTAGTGTTGAA
EW734669       <-- GGAGGGTTGGTTGATCGTAGAGTTTGAAGCAGGGAAGTGTTAGTGTTGAA
EV537756       <-- GGAGGGTTGGTTGATCGTAGAGTTTGAAGCAGGGAAGTGTTAGTGTTGAA
FD550827       <-- GGAGGGTTGGTTGATCGTAGAGTTTGAAGCAGGGAAGTGTTAGTGTTGAA
FD540541       <-- GGAGGGTTGGTTGATCGTAGAGTTTGAAGCAGGGAAGTGTTAGTGTTGAA
FD559381       <-- GGAGGGTTGGTTGATCGTAGAGTTTGAAGCAGGGAAGTGTTAGTGTTGAA
EY931729       <-- GGAGGGTTGGTTGATCGTAGAGTTTGAAGCAGGGAAGTGTTAGTGTTGAA
EX896925       <-- GGAGGGTTGGTTGATCGTAGAGTTTGAAGCAGGGAAGTGTTAGTGTTGAA
EY905895       <-- GGAGGGTTGGTTGATCGTAGAGTTTGAAGCAGGGAAGTGTTAGTGTTGAA
FD541076       <-- GGAGGGTTGGTTGATCGTAGAGTTTGAAGCAGGGAAGTGTTAGTGTTGAA
FD555094       --> ..................................................
FD975748       --> ..................................................
EW738965       --> ..................................................
FD546732       --> ..................................................
EY927611       --> ..................................................
FD537443       --> ..................................................
EX900776       --> ..................................................
FD537028       --> ..................................................
EW738559       --> ..................................................
EY902606       --> ..................................................
EY901727       --> ..................................................
EY910190       --> ..................................................
EV541200       --> ..................................................

               901    -    951
UN20065        --> GCTGCCATTTCTCTCTCTGAGCACAGAGACAAAGAGAGAGAGAGACAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569332       <-- GCTGCCATTTCTCTCTCTctcc............................
FD978483       <-- ..................................................
EY906428       <-- ..................................................
EV536841       <-- GCTGCCATTTCTCTCTCTGAGCACAGAGACAAAGAGAGAGGGAGACAGAG
EW734944       <-- GCTGCCATTTCTCTCTCTGAGCtcctcc......................
EY905255       <-- GCTGCCATTTCTCTCTCTGAGCACcc........................
FD979755       <-- GCTGCCATTTCTCTCTCTGAGCtccc........................
EY914072       <-- GCTGCCATTTCTCTCTCTGAGCtccc........................
EW734669       <-- GCTGCCATTTCTCTCTCTGAGCtccc........................
EV537756       <-- GCTGCCATTTCTCTCTCTGAGCACAGAGACAAAGAGAGAGAGAGACAGAG
FD550827       <-- GCTGCCATTTCTCTCTCTGAGCTCAGAGAAAAAGAG-G-GAGAGACAGAG
FD540541       <-- GCTGCCATTTCTCTCTCTGAGCACAGAGACAAAGAGAGAGAGAGACAGAG
FD559381       <-- GCTGCCATTTCTCTCTCTGAGCACAGAGACAAACAGAGAGAcc.......
EY931729       <-- GCTGCCATTTCTCTCTCTGAGCACcc........................
EX896925       <-- GCTGCCATTTCTCTCc..................................
EY905895       <-- GCTGCCATTTCTCTCTCTGAGCACAGAGACcc..................
FD541076       <-- GCTGCCATTTCTCTCTCTGAGCACAGAGACcc..................
FD555094       --> ..................................................
FD975748       --> ..................................................
EW738965       --> ..................................................
FD546732       --> ..................................................
EY927611       --> ..................................................
FD537443       --> ..................................................
EX900776       --> ..................................................
FD537028       --> ..................................................
EW738559       --> ..................................................
EY902606       --> ..................................................
EY901727       --> ..................................................
EY910190       --> ..................................................
EV541200       --> ..................................................

               951    -   1001
UN20065        --> AGATTGGCTTAAGACAGAGTTGATTCTACCCACAGAAGAGATTTTGGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569332       <-- ..................................................
FD978483       <-- ..................................................
EY906428       <-- ..................................................
EV536841       <-- AGATTGGCTTAAGACAGAGTTGATTCTACCCACAGAAGAGATTTTGGATC
EW734944       <-- ..................................................
EY905255       <-- ..................................................
FD979755       <-- ..................................................
EY914072       <-- ..................................................
EW734669       <-- ..................................................
EV537756       <-- AGATTGGCTTAAGACAGAGTTGATTCTACCCACcc...............
FD550827       <-- AGATTGGCTTAAGACAGAGTTcc...........................
FD540541       <-- AGATTGGCTTAAGACAGAGTTGATTCTACCCcc.................
FD559381       <-- ..................................................
EY931729       <-- ..................................................
EX896925       <-- ..................................................
EY905895       <-- ..................................................
FD541076       <-- ..................................................
FD555094       --> ..................................................
FD975748       --> ..................................................
EW738965       --> ..................................................
FD546732       --> ..................................................
EY927611       --> ..................................................
FD537443       --> ..................................................
EX900776       --> ..................................................
FD537028       --> ..................................................
EW738559       --> ..................................................
EY902606       --> ..................................................
EY901727       --> ..................................................
EY910190       --> ..................................................
EV541200       --> ..................................................

               1001   -   1051
UN20065        --> C
                   ~
EV569332       <-- .
FD978483       <-- .
EY906428       <-- .
EV536841       <-- C
EW734944       <-- .
EY905255       <-- .
FD979755       <-- .
EY914072       <-- .
EW734669       <-- .
EV537756       <-- .
FD550827       <-- .
FD540541       <-- .
FD559381       <-- .
EY931729       <-- .
EX896925       <-- .
EY905895       <-- .
FD541076       <-- .
FD555094       --> .
FD975748       --> .
EW738965       --> .
FD546732       --> .
EY927611       --> .
FD537443       --> .
EX900776       --> .
FD537028       --> .
EW738559       --> .
EY902606       --> .
EY901727       --> .
EY910190       --> .
EV541200       --> .