RadishBase

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Alignment for radish unigene UN20068

               1      -     51
UN20068        --> GAAAGAAACCCGGACGTAGTCCGAGAAAGTCTCTAATTTAAGTGATGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- ..................................................
FY428061       <-- ..................................................
FY431663       <-- ..................................................
FD964802       <-- ..................................................
FY432453       <-- ..................................................
FY428066       <-- ..................................................
EX772992       <-- ..................................................
EY941932       <-- ..................................................
EV529239       <-- ..................................................
EY916308       <-- ..................................................
FY428641       <-- ..................................................
FD534371       <-- ..................................................
EY919636       --> GAAAGAAACCCGGACGTAGTCCGAGAAAGTCTCTAATTTAAGTGATGAAT
FD546126       --> ..................................................
FD547001       --> ..................................................
EX776836       --> ..................................................
EV533036       --> ..................................................
EY912007       --> ..................................................
FD960708       --> ..................................................

               51     -    101
UN20068        --> GATTATCAAGCAAGGTAACTTAAGTCGTATGTCTAATTAAGCGGAACCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- ..................................................
FY428061       <-- ..................................................
FY431663       <-- ..................................................
FD964802       <-- ..................................................
FY432453       <-- ..................................................
FY428066       <-- ..................................................
EX772992       <-- ..................................................
EY941932       <-- ..................................................
EV529239       <-- ..................................................
EY916308       <-- ..................................................
FY428641       <-- ..................................................
FD534371       <-- ..................................................
EY919636       --> GATTATCAAGCAAGGTAACTTAAGTCGTATGTCTAATTAAGCGGAACCAA
FD546126       --> ..................................................
FD547001       --> ..................................................
EX776836       --> ..................................................
EV533036       --> ..................................................
EY912007       --> ..................................................
FD960708       --> ..................................................

               101    -    151
UN20068        --> CAACCCAAAGTTAATCTGAAACACAGCTTTATTATAAGTGCGGATTATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- ..................................................
FY428061       <-- ..................................................
FY431663       <-- ..................................................
FD964802       <-- ..................................................
FY432453       <-- ..................................................
FY428066       <-- ..................................................
EX772992       <-- ..................................................
EY941932       <-- ..................................................
EV529239       <-- ..................................................
EY916308       <-- ..................................................
FY428641       <-- ..................................................
FD534371       <-- ..................................................
EY919636       --> CAACCCAAAGTTAATCTGAAACACAGCTTTATTATAAGTGCGGATTATTT
FD546126       --> ............AATCTGAAACACAGCTTTATTATAAGTGCGGATTATTT
FD547001       --> ............AATCTGAAACACAGCTTTATTATAAGTGCGGATTATTT
EX776836       --> ............cATCTGAAACACAGCTTTATTATAAGTGCGGATTATTT
EV533036       --> ...........cggTCTGAAACACAGCTTTATTATAAGTGCGGATTATTT
EY912007       --> ............ggTCTGAAACACAGCTTTATTATAAGTGCGGATTATTT
FD960708       --> ...............CTGAAACACAGCTTTATTATAAGTGCGGATTATTT

               151    -    201
UN20068        --> GGTTTCCGTTTCTATTTGGTTTCCGTTTCTATAACCAAATGAAACAAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- ..................................................
FY428061       <-- ..................................................
FY431663       <-- ..................................................
FD964802       <-- ..................................................
FY432453       <-- ..................................................
FY428066       <-- ..................................................
EX772992       <-- ..................................................
EY941932       <-- ..................................................
EV529239       <-- ..................................................
EY916308       <-- ..................................................
FY428641       <-- ..................................................
FD534371       <-- ..................................................
EY919636       --> GGTTTCCGTTTCTATTTGGTTTCCGTTTCTATAACCAAATGAAACAAAAC
FD546126       --> GGTTTCCGTTTCTATTTGGTTTCCGTTTCTATAACCAAATGAAACAAAAC
FD547001       --> GGTTTCCGTTTCTATTTGGTTTCCGTTTCTATAACCAAATGAAACAAAAC
EX776836       --> GGTTTCCGTTTCTATTTGGTTTCCGTTTCTATAACCAAATGAAACAAAAC
EV533036       --> GGTTTCCGTTTCTATTTGGTTTCCGTTTCTATAACCAAATGAAACAAAAC
EY912007       --> GGTTTCCGTTTCTATTTGGTTTCCGTTTCTATAACCAAATGAAACAAAAC
FD960708       --> GGTTTCCGTTTCTATTTGGTTTCCGTTTCTATAACCAAATGAAACAAAAC

               201    -    251
UN20068        --> CACATATATTCATAAACGAGAAACACTCGATCGGCTTGGTGAATTGGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- ..................................................
FY428061       <-- ..................................................
FY431663       <-- ..................................................
FD964802       <-- ..................................................
FY432453       <-- ..................................................
FY428066       <-- ..................................................
EX772992       <-- ..................................................
EY941932       <-- ..................................................
EV529239       <-- ..................................................
EY916308       <-- ..................................................
FY428641       <-- ..................................................
FD534371       <-- ..................................................
EY919636       --> CACATATATTCATAAACGAGAAACACTCGATCGGCTTGGTGAATTGGTCC
FD546126       --> CACATATATTCATAAACGAGAAACACTCGATCGGCTTGGTGAATTGGTCC
FD547001       --> CACATATATTCATAAACGAGAAACACTCGATCGGCTTGGTGAATTGGTCC
EX776836       --> CACATATATTCATAAACGAGAAACACTCGATCGGCCTGGTGAATTGGTCC
EV533036       --> CACATATATTCATAAACGAGAAACACTCGATCGGCTTGGTGAATTGGTCC
EY912007       --> CACATATATTCATAAACGAGAAACACTCGATCGGCTTGGTGAATTGGTCC
FD960708       --> CACATATATTCATAAACGAGAAACACTCGATCGGCTTGGTGAATTGGTCC

               251    -    301
UN20068        --> AAAGCACCTGTGCATCAATTACAGAGAGATGCTCATCATCAAGCCTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- ..................................................
FY428061       <-- ..................................................
FY431663       <-- ..................................................
FD964802       <-- ..................................................
FY432453       <-- ..................................................
FY428066       <-- ..................................................
EX772992       <-- ..................................................
EY941932       <-- ..................................................
EV529239       <-- ..................................................
EY916308       <-- ..................................................
FY428641       <-- ..................................................
FD534371       <-- ..................................................
EY919636       --> AAAGCACCTGTGCATCc.................................
FD546126       --> AAAGCACCTGTGCATCAATTACAGAGAGATGCTCATCATCAAGCCTCTTC
FD547001       --> AAAGCACCTGTGCATCAATTACAGAGAGATGCTCATCATCAAGCCTCTTC
EX776836       --> AAAGCACCTGTGCATCAATTACAGAGAGATGCTCATCATCAAGCCTCTTC
EV533036       --> AAAGCACCTGTGCATCAATTACAGAGAGATGCTCATCATCAAGCCTCTTC
EY912007       --> AAAGCACCTGTGCATCAATTACAGAGAGATGCTCATCATCAAGCCTCTTC
FD960708       --> AAAGCACCTGTGCATCAATTACAGAGAGATGCTCATCATCAAGCCTCTTC

               301    -    351
UN20068        --> CATGTCCTGATCGATTTCACATCTCCCCAGCTCCCTGTACCATTCTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- ..................................................
FY428061       <-- ..................................................
FY431663       <-- ..................................................
FD964802       <-- ..................................................
FY432453       <-- ..................................................
FY428066       <-- ..................................................
EX772992       <-- ..................................................
EY941932       <-- ..................................................
EV529239       <-- ..................................................
EY916308       <-- ..................................................
FY428641       <-- ..................................................
FD534371       <-- ..................................................
EY919636       --> ..................................................
FD546126       --> CATGTCCTGATCGATTTCACATCTCCCCAGCTCCCTGTACCATTCTTGTT
FD547001       --> CATGTCCTGATCGATTTCACATCTCCCCAGCTCCCTGTACCATTCTTGTT
EX776836       --> CATGTCCTGATCGATTTCACATCTCCCCAGCTCCCTGTACCATTCTTGTT
EV533036       --> CATGTCCTGATCGATTTCACATCTCCCCAGCTCCCTGTACCATTCTTGTT
EY912007       --> CATGTCCTGATCGATTTCACATCTCCCCAGCTCCCTGTACCATTCTTGTT
FD960708       --> CATGTCCTGATCGATTTCACATCTCCCCAGCTCCCTGTACCATTCTTGTT

               351    -    401
UN20068        --> CAAATCAGCAACCACAACTCTCGCCCTCCTCTCCCACCCAGCTTT-ACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- .AAATCAGCAACCACAACTCTCGCCCTCCTCTCCCACCCAGCTTTTACCA
FY428061       <-- ..................................................
FY431663       <-- ..................................................
FD964802       <-- ..................................................
FY432453       <-- ..................................................
FY428066       <-- ..................................................
EX772992       <-- ..................................................
EY941932       <-- ..................................................
EV529239       <-- ..................................................
EY916308       <-- ..................................................
FY428641       <-- ..................................................
FD534371       <-- ..................................................
EY919636       --> ..................................................
FD546126       --> CAAATCAGCAACCACAACTCTCGCCCTCCTCTCCCACCCAGCTTT-ACCA
FD547001       --> CAAATCAGCAACCACAACTCTCGCCCTCCTCTCCCACCCAGCTTT-ACCA
EX776836       --> CAAATCAGCAACCACAACTCTCGCCCTCCTCTCCCACCCAGCTTT-ACCA
EV533036       --> CAAATCAGCAACCACAACTCTCGCCCTCCTCTCCCACCCAGCTTT-ACCA
EY912007       --> CAAATCAGCAACCACAACTCTCGCCCTCCTCTCCCACCCAGCTTT-ACCA
FD960708       --> CAAATCAGCAACCACAACTCTCGCCCTCCTCTCCCACCCAGCTTT-ACCA

               401    -    451
UN20068        --> TACGCATGGTATCCAATCCCACCCCC-ATAGCATAGATTCACACCTTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- TACGCATGGTATCCAATCCCACCCCCCATAGCATAGATTCACAC-TTTGA
FY428061       <-- ..................................................
FY431663       <-- ..................................................
FD964802       <-- ..................................................
FY432453       <-- ..................................................
FY428066       <-- ..................................................
EX772992       <-- ..................................................
EY941932       <-- ..................................................
EV529239       <-- ..................................................
EY916308       <-- ..................................................
FY428641       <-- ..................................................
FD534371       <-- ..................................................
EY919636       --> ..................................................
FD546126       --> TACGCATGGTATCCAATCCCACCCCC-ATAGCATAGATTCACACCTTTGA
FD547001       --> TACGCATGGTATCCAATCCCACCCCC-ATAGCATAGATTCACACCTTTGA
EX776836       --> TACGCATGGTATCCAATCCCACCCCC-ATAGCATAGATTCACACCTTTGA
EV533036       --> TACGCATGGTATCCAATCCCACCCCC-ATAGCATAGATTCACACCTTTGA
EY912007       --> TACGCATGGTATCCAATCCCACCCCC-ATAGCATAGATTCACACCTTTGA
FD960708       --> TACGCATGGTATCCAATCCCACCCCC-ATAGCATAGATTCACACCTTTGA

               451    -    501
UN20068        --> GTTCACCGCAAAAGTCGTTGATATGGTCATGACCC-ACAAACACTGATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- GTTCACCGCAAAAGTCGTTGATATGGTCATGACCCCACAAACACTGATTT
FY428061       <-- ...................GATATGGTCATGACCC-ACAAACACTGATTT
FY431663       <-- .........................GTCATGACCC-ACAAACACTGATTT
FD964802       <-- ..................................................
FY432453       <-- ..................................................
FY428066       <-- ..................................................
EX772992       <-- ..................................................
EY941932       <-- ..................................................
EV529239       <-- ..................................................
EY916308       <-- ..................................................
FY428641       <-- ..................................................
FD534371       <-- ..................................................
EY919636       --> ..................................................
FD546126       --> GTTCACCGCAAAAGTCGTTGATATGGTCATGACCC-ACAAACACTGATTT
FD547001       --> GTTCACCGCAAAAGTCGTTGATATGGTCATGACCC-ACAAACACTGATTT
EX776836       --> GTTCACCGCAAAAGTCGTTGATATGGTCATGACCC-ACAAACACTGATTT
EV533036       --> GTTCACCGCAAAAGTCGTTGATATGGTCATGACCC-ACAAACACTGATTT
EY912007       --> GTTCACCGCAAAAGTCGTTGATATGGTCATGACCC-ACAAACACTGATTT
FD960708       --> GTTCACCGCAAAAGTCGTTGATATGGTCATGACCC-ACAAACACTGATTT

               501    -    551
UN20068        --> TACATCTCCTCTAGCTACCAACGTCGTGAAGAACCCTGAGTTTTTGGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- TACATCTCCTCTAGCTACCAACGTCGTGAAGAACCCTGAGTTTTTGGTAG
FY428061       <-- TACATCTCCTCTAGCTACCAACGTCGTGAAGAACCCTGAGTTTTTGGTAG
FY431663       <-- TACATCTCCTCTAGCTACCAACGTCGTGAAGAACCCTGAGTTTTTGGTAG
FD964802       <-- ...ATCTC-TCTAGCTACCAACGTCGTGAAGAACC-TGAGTTTT-GGTAG
FY432453       <-- ............................AAGAACCCTGAGTTTTTGGTAG
FY428066       <-- ....................................TGAGTTTTTGGTAG
EX772992       <-- ..................................................
EY941932       <-- ..................................................
EV529239       <-- ..................................................
EY916308       <-- ..................................................
FY428641       <-- ..................................................
FD534371       <-- ..................................................
EY919636       --> ..................................................
FD546126       --> TACATCTCCTCTAGCTACCAACGTCGTGAAGAACCCTGAGTTTTTGGTAG
FD547001       --> TACATCTCCTCTAGCTACCAACGTCGTGAAGAACCCTGAGTTTTTGGTAG
EX776836       --> TACATCTCCTCTAGCTACCAACGTCGTGAAGAACCCTGAGTTTTTGGTAG
EV533036       --> TACATCTCCTCTAGCTACCAACGTCGTGAAGAACCCTGAGTTTTTGGTAG
EY912007       --> TACATCTCCTCTAGCTACCAACGTCGTGAAGAACCCTGAGTTTTTGGTAG
FD960708       --> TACATCTCCTCTAGCTACCAACGTCGTGAAGAACCCTGAGTTTTTGGTAG

               551    -    601
UN20068        --> CTGAGCCTGTAGCTTCTTGTCTCACTCCTGTTGTGGCGTTCTTTGTGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- CTGAGCCTGTAGCTTCTTGTCTCACTCCTGTTGTGGCGTTCTTTGTGTCA
FY428061       <-- CTGAGCCTGTAGCTTCTTGTCTCACTCCTGTTGTGGCGTTCTTTGTGTCA
FY431663       <-- CTGAGCCTGTAGCTTCTTGTCTCACTCCTGTTGTGGCGTTCTTTGTGTCA
FD964802       <-- CTGAGC-TGTAGCTTCT-GTCTCACTCCTGTTGTGGCGTTCTTTGTGTCA
FY432453       <-- CTGAGCCTGTAGCTTCTTGTCTCACTCCTGTTGTGGCGTTCTTTGTGTCA
FY428066       <-- CTGAGCCTGTAGCTTCTTGTCTCACTCCTGTTGTGGCGTTCTTTGTGTCA
EX772992       <-- ...............................................TCA
EY941932       <-- ..................................................
EV529239       <-- ..................................................
EY916308       <-- ..................................................
FY428641       <-- ..................................................
FD534371       <-- ..................................................
EY919636       --> ..................................................
FD546126       --> CTGAGCCTGTAGCTTCTTGTCTCACTCCTGTTGTGGCGTTCTTTGTGTCA
FD547001       --> CTGAGCCTGTAGCTTCTTGTCTCACTCCTGTTGTGGCGTTCTTTGTGTCA
EX776836       --> CTGAGCCTGTAGCTTCTTGTCTCACTCCTGTTGTGGCGTTCTTTGTGTCA
EV533036       --> CTGAGCCTGTAGCTTCTTGTCTCACTCCTGTTGTGGCGTTCTTTGTGTCA
EY912007       --> CTGAGCCTGTAGCTTCTTGTCTCACTCCTGTTGTGGCGTTCTTTGTGTCA
FD960708       --> CTGAGCCTGTAGCTTCTTGTCTCACTCCTGTTGTGGCGTTCTTTGTGTCA

               601    -    651
UN20068        --> AAGTTTTTAAACTCCGGTAGTGGAATGTGGAAGTAAGCTAGTCCTGGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- AAGTTTTTAAACTCCGGTAGTGGAATGTGGAAGTAAGCTAGTCCTGGAGC
FY428061       <-- AAGTTTTTAAACTCCGGTAGTGGAATGTGGAAGTAAGCTAGTCCTGGAGC
FY431663       <-- AAGTTTTTAAACTCCGGTAGTGGAATGTGGAAGTAAGCTAGTCCTGGAGC
FD964802       <-- AAGTTTTTAAACTCCGGTAGTGGAATGTGGAAGTAAGCTAGTCCTGGAGC
FY432453       <-- AAGTTTTTAAACTCCGGTAGTGGAATGTGGAAGTAAGCTAGTCCTGGAGC
FY428066       <-- AAGTTTTTAAACTCCGGTAGTGGAATGTGGAAGTAAGCTAGTCCTGGAGC
EX772992       <-- AAGTTT--TAACTCCGGTAGTGGAATGTG-AAGTAAGCTAGTCCTG-AGC
EY941932       <-- ..................................................
EV529239       <-- ..................................................
EY916308       <-- ..................................................
FY428641       <-- ..................................................
FD534371       <-- ..................................................
EY919636       --> ..................................................
FD546126       --> AAGTTTTTAAACTCCGGTAGTGGAATGTGGAAGTAAGCTAGTCCTGGAGC
FD547001       --> AAGTTTTTAAACTCCGGTAGTGGAATGTGGAAGTAAGCTAGTCCTGGAGC
EX776836       --> AAGTTTTTAAACTCCGGTAGTGGAATGTGGAAGTAAGCTAGTCCTGGAGC
EV533036       --> AAGTTTTTAAACTCCGGTAGTGGAATGTGGAAGTAAGCTAGTCCTGGAGC
EY912007       --> AAGTTTTTAAACTCCGGTAGTGGAATGTGGAAGTAAGCTAGTCCTGGAGC
FD960708       --> AAGTTTTTAAACTCCGGTAGTGGAATGTGGAAGTAAGCTAGTCCTGGAGC

               651    -    701
UN20068        --> TGTACCTTGTTGAGGATTAGGCTCTTCATTGTATTCCCTCTGGAGACGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- TGTACCTTGTTGAGGATTAGGCTCTTCATTGTATTCCCTCTGGAGACGTT
FY428061       <-- TGTACCTTGTTGAGGATTAGGCTCTTCATTGTATTCCCTCTGGAGACGTT
FY431663       <-- TGTACCTTGTTGAGGATTAGGCTCTTCATTGTATTCCCTCTGGAGACGTT
FD964802       <-- TGTACTTTGTTGAGGATTAGGCTCTTCATTGTATTCCCTCTGGAGACGTT
FY432453       <-- TGTACCTTGTTGAGGATTAGGCTCTTCATTGTATTCCCTCTGGAGACGTT
FY428066       <-- TGTACCTTGTTGAGGATTAGGCTCTTCATTGTATTCCCTCTGGAGACGTT
EX772992       <-- TGTA--CTG-TGAGGATTAGGCTCTTCATTGTAT-CCCTCTGGAGACGTT
EY941932       <-- ..................................................
EV529239       <-- ..................................................
EY916308       <-- ..................................................
FY428641       <-- ..................................................
FD534371       <-- ..................................................
EY919636       --> ..................................................
FD546126       --> TGTACCTTGTTGAGGATTAGGCTCTTCATTGTATTCCCTCTGGAGACGTT
FD547001       --> TGTACCTTGTTGAGGATTAGGCTCTTCATTGTATTCCCTCTGGA--CGTT
EX776836       --> TGTACCTTGTTGAGGATTAGGCTCTTCATTGTATTCCCTCTGGAGACGTT
EV533036       --> TGTACCTTGTTGAGGATTAGGCTCTTCATTGTATTCCCTCTGGAGACGTT
EY912007       --> TGTACCTTGTTGAGGATTAGGCTCTTCATTGTATTCCCTCTGGAGACGTT
FD960708       --> TGTACCTTGTTGAGGATTAGGCTCTTCATTGTATTCCCTCTGGAGACGTT

               701    -    751
UN20068        --> TCGAAGTCTGGTTATACCAGACCTGCTGAGAAGTTTTGATCCAATCATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- TCGAAGTCTGGTTATACCAGACCTGCTGAGAAGTTTTGATCCAATCATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428061       <-- TCGAAGTCTGGTTATACCAGAGCTGCTGAGAAGTTTTGATCCAATCATAA  Raphanus sativus cv GSK3-1
FY431663       <-- TCGAAGTCTGGTTATACCAGAGCTGCTGAGAAGTTTTGATCCAATCATAA  Raphanus sativus cv GSK3-1
FD964802       <-- TCGAAGTCTGGTTATACCAGACCTGCTGAGAAGTTTTGATCCAATCATAA  Raphanus raphanistrum subsp. maritimus
FY432453       <-- TCGAAGTCTGGTTATACCAGAGCTGCTGAGAAGTTTTGATCCAATCATAA  Raphanus sativus cv GSK3-1
FY428066       <-- TCGAAGTCTGGTTATACCAGAGCTGCTGAGAAGTTTTGATCCAATCATAA  Raphanus sativus cv GSK3-1
EX772992       <-- TCGAAGTCTGGTTATACCAGACGTGCTGAGAAGTTTTGATCCAATCATAA  Raphanus raphanistrum subsp. landra
EY941932       <-- ...........................GAGAAGTTT-GATCCAATCATA-  Raphanus sativus cv Early Scarlet Globe
EV529239       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY916308       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428641       <-- ..................................................  Raphanus sativus cv GSK3-1
FD534371       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY919636       --> ..................................................  Raphanus raphanistrum subsp. landra
FD546126       --> TCGAAGTCTGGTTATACCAGACCTGCTGAGAAGTTTTGATCCAATCATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547001       --> TCGAAGTCTGGTTATACCAGACCTGCTGAGAAGTTTTGATCCAATCATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776836       --> TCGAAGTCTGGTTATACCAGACCTGCTGAGAAGTTTTGATCCAATCATAA  Raphanus raphanistrum subsp. landra
EV533036       --> TCGAAGTCTGGTTATACCAGACCTGCTGAGAAGTTTTGATCCAATCATAA  Raphanus raphanistrum subsp. maritimus
EY912007       --> TCGAAGTCTGGTTATACCAGACCTGCTGAGAAGTTTTGA...........  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960708       --> TCGAAGTCTGGTTATACCAGACCTGCTGAGAAGTTTTGAT..........  Raphanus raphanistrum subsp. maritimus

               751    -    801
UN20068        --> CCTTTTATGGAAGGAACACTAGAGTGATCTCCACTATCTAGAAAATAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- CCTTTTATGGAAGGAACACTAGAGTGATCTCCACTATCTAGAAAATAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428061       <-- CCTTTTATGGAAGGGACACTAGAGTGATCTCCACTATCTAGAAAATAGAG  Raphanus sativus cv GSK3-1
FY431663       <-- CCTTTTATGGAAGGGACACTAGAGTGATCTCCACTATCTAGAAAATAGAG  Raphanus sativus cv GSK3-1
FD964802       <-- CCTTTTATGGAAGGAACACTAGAGTGATCTCCACTATCTAGAAAATAGAG  Raphanus raphanistrum subsp. maritimus
FY432453       <-- CCTTTTATGGAAGGGACACTAGAGTGATCTCCACTATCTAGAAAATAGAG  Raphanus sativus cv GSK3-1
FY428066       <-- CCTTTTATGGAAGGGACACTAGAGTGATCTCCACTATCTAGAAAATAGAG  Raphanus sativus cv GSK3-1
EX772992       <-- CCTTTTATGGAAGGAACACTAGAGTGATCTCCACTACCTAGAAAATAGAG  Raphanus raphanistrum subsp. landra
EY941932       <-- CCTTTTATGGAAGGAACACTAGAGTGATCTCCACTATCTAGAAAATAGAG  Raphanus sativus cv Early Scarlet Globe
EV529239       <-- .....TATGGAAGGAACACTGGAGTGATCTCCACTATCTAGAAAATAGAG  Raphanus raphanistrum subsp. maritimus
EY916308       <-- .....TATGGAAGGAACACTAGAGTGATCTCCACTATCTAGAAA-TAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428641       <-- ..................................................  Raphanus sativus cv GSK3-1
FD534371       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY919636       --> ..................................................  Raphanus raphanistrum subsp. landra
FD546126       --> CCTTTTATGGAAGGAACACTAGAGTGATCTCCACTATCTAGAAAATAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547001       --> CCTTTTATGGAAGGAACACTAGAGTGATCTCCACTATCTAGAAAATAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776836       --> CCTTTTATGGAAGGAACACTAGAGTGATCTCCACTACCTAGAAAATAGAG  Raphanus raphanistrum subsp. landra
EV533036       --> CCTTTTATGGAAGGAACACTGGAGTGATCTCCACTATCTAGAAAATAGAG  Raphanus raphanistrum subsp. maritimus
EY912007       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960708       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               801    -    851
UN20068        --> ATTGAGAAGAGATTTTTCCTGTAAACTCGACTCAGCAACTCCATGTATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- ATTGAGAAGAGATTTTTCCTGTAAACTCGACTCAGCAACTCCATGTATTT
FY428061       <-- ATTGAGAAGAGATTTTTCCTGTAAACTCGACTCAGCAACTCCATGTATTT
FY431663       <-- ATTGAGAAGAGATTTTTCCTGTAAACTCGACTCAGCAACTCCATGTATTT
FD964802       <-- ATTGAGAAGAGATTTTTCCTGTAAACTCGACTCAGCAACTCCATGTATTT
FY432453       <-- ATTGAGAAGAGATTTTTCCTGTAAACTCGACTCAGCAACTCCATGTATTT
FY428066       <-- ATTGAGAAGAGATTTTTCCTGTAAACTCGACTCAGCAACTCCATGTATTT
EX772992       <-- ATTGAGAAGAGATTTTTCCTGTAAACTCGACTCAGCAACTCCATGTATTT
EY941932       <-- ATTGAGAAGAGATTTTTCCTGTAAACTCGACTCAGCAACTCCATGTATTT
EV529239       <-- ATTGAGAGGAGATTTTTCCTGTAAACTCGACTCAGCAACTCCATGTATTT
EY916308       <-- ATTGAGAAGAGATCTTTCCTGTAAACTCGACTCAGCAACTCCATGTATTT
FY428641       <-- ..................CTGTAAACTCGACTCAGCAACTCCATGTATTT
FD534371       <-- ......................AAACTCGACTCAGCAACTCCATGTATTT
EY919636       --> ..................................................
FD546126       --> ATTGAGAAGAGATTTTTCCTGTAAACTCGACTCAGCAACTCCATGTATTT
FD547001       --> ATTGAGAAGAGATTTTTCCTGTAAACTCGACTCAGCAACTCCATGTATTT
EX776836       --> ATTGAGAAGAGATTTTTCCTGTAAACTCGACTCAGCAACTCCATGTATTT
EV533036       --> ATTGAGAGGAGATTTTTCCTGTAAACTCGACTCAGCAACTCCATGTATTT
EY912007       --> ..................................................
FD960708       --> ..................................................

               851    -    901
UN20068        --> CGAGATTATAATTCCCAAACCCATCAATGTGAAAAGCCTCAGGAGGATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- CGAGATTATAATTCCCAAACCCATCAATGTGAAAAGCCTCAGGAGGATTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428061       <-- CGAGATTATAATTGCCAAACCCATCAATGTGAAAAGCCTCAGGAGGATTC  Raphanus sativus cv GSK3-1
FY431663       <-- CGAGATTATAATTGCCAAACCCATCAATGTGAAAAGCCTCAGGAGGATTC  Raphanus sativus cv GSK3-1
FD964802       <-- CGAGATTATAATTCCCAAACCCATCAATGTGAAAAGCCTCAGGAGGATTC  Raphanus raphanistrum subsp. maritimus
FY432453       <-- CGAGATTATAATTGCCAAACCCATCAATGTGAAAAGCCTCAGGAGGATTC  Raphanus sativus cv GSK3-1
FY428066       <-- CGAGATTATAATTGCCAAACCCATCAATGTGAAAAGCCTCAGGAGGATTC  Raphanus sativus cv GSK3-1
EX772992       <-- CGAGATTATAATTCCCAAACCCATCAATGTGAAAAGCCTCAGGAGGATTC  Raphanus raphanistrum subsp. landra
EY941932       <-- CGAGATTATAATTCCCAAACCCATCAATGTGAAAAGCCTCAGGAGGATTC  Raphanus sativus cv Early Scarlet Globe
EV529239       <-- CGAGATTATAATTCCCAAACCCATCAATGTGAAAAGCCTCAGGAGGATTC  Raphanus raphanistrum subsp. maritimus
EY916308       <-- CGAGATTATAATTCCCAAACCCATCAATGTGAAAAGCCTCAGGAGGATTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428641       <-- CGAGATTATAATTGCCAACCACATCAATGTGAAAA-CCTCAGGAGGATTC  Raphanus sativus cv GSK3-1
FD534371       <-- CGAGATTATAATTCCCAAACCCATCAATGTGAAAAGCCTCAGGAGGATTC  Raphanus raphanistrum subsp. maritimus
EY919636       --> ..................................................  Raphanus raphanistrum subsp. landra
FD546126       --> CGAGATTATAATTCCCAAACCCATCAATGTGAAAgcc.............  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547001       --> CGAGATTATAATTCCCAAACCCATCAATGTGAAAgc..............  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776836       --> CGAGATTATAATTCCCAAACCCATCAATGTGAAAAGCCTC..........  Raphanus raphanistrum subsp. landra
EV533036       --> CGAGATTATAATTCCCAAACCCATCAATGTGA..................  Raphanus raphanistrum subsp. maritimus
EY912007       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960708       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               901    -    951
UN20068        --> ACTTGAGACAGAGTGTTGGGAAGCATCACTATATAAATCATGAGTTCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- ACTTGAGACAGAGTGTTGGGAAGCATCACTATATAAATCATGAGTTCTTG
FY428061       <-- ACTTGAGACAGAGTGTTGGGAAGCATCACTATATAAATCATGAGTTCTTG
FY431663       <-- ACTTGAGACAGAGTGTTGGGAAGCATCACTATATAAATCATGAGTTCTTG
FD964802       <-- ACTTGAGACAGAGTGTTGGGAAGCATCACTATATAAATCATGAGTTCTTG
FY432453       <-- ACTTGAGACAGAGTGTTGGGAAGCATCACTATATAAATCATGAGTTCTTG
FY428066       <-- ACTTGAGACAGAGTGTTGGGAAGCATCACTATATAAATCATGAGTTCTTG
EX772992       <-- ACTTGAGACAGAGTGTTGGGAAGCATCACTATATAAATCATGAGTTCTTG
EY941932       <-- ACTTGAGACAGAGTGTTGGGAAGCATCACTATATAAATCATGAGTTCTTG
EV529239       <-- ACTTGAGACAGAGTGTTGGGAAGCATCACTATATAAATCATGAGTTCTTG
EY916308       <-- ACTTGAGACAGAGTGTTGGGAAGCATCACTATATAAATCATGAGTTCTTG
FY428641       <-- ACTTG-GACAGAGTGT-GTGAACCTCCACTATATAA-TCATGAGTTCTTG
FD534371       <-- ACTTGAGACAGAGTGTTGGGAAGCATCACTATATAAATCATGAGTTCTTG
EY919636       --> ..................................................
FD546126       --> ..................................................
FD547001       --> ..................................................
EX776836       --> ..................................................
EV533036       --> ..................................................
EY912007       --> ..................................................
FD960708       --> ..................................................

               951    -   1001
UN20068        --> TCGGGACAACGTAGATTCTTGATCATGGTTTCCCAAAACAGCAACCCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- TCGGGACAACGTAGATTCTTGATCATGGTTTCCCAAAACAGCAACCCAAG
FY428061       <-- TCGGGACAACGTAGATTCTTGATCATGGTTTCCCAAAACAGCAACCCAAG
FY431663       <-- TCGGGACAACGTAGATTCTTGATCATGGTTTCCCAAAACAGCAACCCAAG
FD964802       <-- TCGGGACAACGTAGATTCTTGATCATGGTTTCCCAAAACAGCAACCCAAG
FY432453       <-- TCGGGACAACGTAGATTCTTGATCATGGTTTCCCAAAACAGCAACCCAAG
FY428066       <-- TCGGGACAACGTAGATTCTTGATCATGGTTTCCCAAAACAGCAACCCAAG
EX772992       <-- TCGGGACAACGTAGATTCTTGATCATGGTTTCCCAAAACAGCAACCCAAG
EY941932       <-- ACGGGACAACGTAGATTCTTGATCATGGTTTCCCAAAACAGCAACCCAAG
EV529239       <-- TCGGGACAACGTAGATTCTTGATCATGGTTTCCCAAAACAGCAACCCAAG
EY916308       <-- TCGGGACAACGTAGATTCTTGATCATGGTTTCCCAAAACAGCAACCCAAG
FY428641       <-- TCGGGACAACGTAGATTCTTGATCATGGTTTCCCAAAACAGCAACCCAAG
FD534371       <-- TCGGGACAACGTAGATTCTTGATCATGGTTTCCCAAAACAGCAACCCAAG
EY919636       --> ..................................................
FD546126       --> ..................................................
FD547001       --> ..................................................
EX776836       --> ..................................................
EV533036       --> ..................................................
EY912007       --> ..................................................
FD960708       --> ..................................................

               1001   -   1051
UN20068        --> GGATCTTAGAAGCAATCGCTGGAGCAAAAGCAGCATCCATGGATTTCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- GGATCTTAGAAGCAATCGCTGGAGCAAAAGCAGCATCCATGGATTTCACA
FY428061       <-- GGATCTTAGAAGCAATCGCTGGAGCAAAAGCAGCATCCATGGATTTCACA
FY431663       <-- GGATCTTAGAAGCAATCGCTGGAGCAAAAGCAGCATCCATGGATTTCACA
FD964802       <-- GGATCTTAGAAGCAATCGCTGGAGCAAAAGCAGCATCCATGGATTTCACA
FY432453       <-- GGATCTTAGAAGCAATCGCTGGAGCAAAAGCAGCATCCATGGATTTCACA
FY428066       <-- GGATCTTAGAAGCAATCGCTGGAGCAAAAGCAGCATCCATGGATTTCACA
EX772992       <-- GGATCTTAGAAGCAATCGCTGGAGCAAAAGCAGCATCCATGGATTTCACA
EY941932       <-- GGATCTTAGAAGCAATCGCTGGAGCAAAAGCAGCATCCATGGATTTCACA
EV529239       <-- GGATCTTAGAAGCAATCGCTGGAGCAAAAGCAGCGTCCATGGATTTCACA
EY916308       <-- GGATCTTAGAAGCAATCGCTGGAGCAAAAGCAGCATCCATGGATTTCACA
FY428641       <-- GGATCTTAGAAGCAATCGCTGGAGCAAAAGCAGCATCCATGGATTTCACA
FD534371       <-- GGATCTTAGAAGCAATCGCTGGAGCAAAAGCAGCATCCATGGATTTCACA
EY919636       --> ..................................................
FD546126       --> ..................................................
FD547001       --> ..................................................
EX776836       --> ..................................................
EV533036       --> ..................................................
EY912007       --> ..................................................
FD960708       --> ..................................................

               1051   -   1101
UN20068        --> GCGTCTTTCACATCAGACCCAAATATATTATCACCGGTGAAGACGATGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- GCGTCTTTCACATCAGACCCAAATATATTc....................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428061       <-- GCGTCTTTAACATCAGACCCAAATATATTATCACCGGTGAAGACGATGAG  Raphanus sativus cv GSK3-1
FY431663       <-- GCGTCTTTAACATCAGACCCAAATATATTATCACCGGTGAAGACGATGAG  Raphanus sativus cv GSK3-1
FD964802       <-- GCGTCTTTCACATCAGACCCAAATATATTATCACCGGTGAAGACGATGAG  Raphanus raphanistrum subsp. maritimus
FY432453       <-- GCGTCTTTAACATCAGACCCAAATATATTATCACCGGTGAAGACGATGAG  Raphanus sativus cv GSK3-1
FY428066       <-- GCGTCTTTAACATCAGACCCAAATATATTATCACCGGTGAAGACGATGAG  Raphanus sativus cv GSK3-1
EX772992       <-- GCGTCTTTCACATCAGACCCAAATATATTATCACCGGTGAAGACGATGAG  Raphanus raphanistrum subsp. landra
EY941932       <-- GCGTCTTTCACATCAGACCCAAATATATTATCACCGGTGAAGACGATGAG  Raphanus sativus cv Early Scarlet Globe
EV529239       <-- GCGTCTTTCACATCAGACCCAAATATATTATCACCGGTGAAGACGATGAG  Raphanus raphanistrum subsp. maritimus
EY916308       <-- GCGTCTTTCACATCAGACCCAAATATATTATCACCGGTGAAGACGATGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428641       <-- GCGTCTTTAACATCAGACCCAAATATATTATCACCGGTGAAGACGATGAG  Raphanus sativus cv GSK3-1
FD534371       <-- GCGTCTTTCACATCAGACCCAAATATATTATCACCGGTGAAGACGATGAG  Raphanus raphanistrum subsp. maritimus
EY919636       --> ..................................................  Raphanus raphanistrum subsp. landra
FD546126       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547001       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776836       --> ..................................................  Raphanus raphanistrum subsp. landra
EV533036       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY912007       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960708       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               1101   -   1151
UN20068        --> GTCAGGTTTCTCGGCGGCAATGACTCGCGACATGAAGGCGATGGTGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- ..................................................
FY428061       <-- GTCAGGTTTCTCGGCGGCAATGACTCGCGACATGAAGGCGATGGTGTTGA
FY431663       <-- GTCAGGTTTCTCGGCGGCAATGACTCGCGACATGAAGGCGATGGTGTTGA
FD964802       <-- GTCAGGTTTCTCGGCGGCAATGACTCGCGACATGAAGGCGATGGTGTTGA
FY432453       <-- GTCAGGTTTCTCGGCGGCAATGACTCGCGACATGAAGGCGATGGTGTTGA
FY428066       <-- GTCAGGTTTCTCGGCGGCAATGACTCGCGACATGAAGGCGATGGTGTTGA
EX772992       <-- GTCAGGTTT-TCGGCGGCAATGACTCGCGACATGAAGGCGATGGTGTTGA
EY941932       <-- GTCAGGTTTCTCGGCGGCAATGACTCGCGACATGAAGGCGATGGTGTTGA
EV529239       <-- GTCAGGTTTCTCGGCGGCAATGACTCGCGACATGAAGGCGATGGTGTTGA
EY916308       <-- GTCAGGTTTCTCGGCGGCAATGACTCGCGACATGAAGGCGATGGTGTTGA
FY428641       <-- GTCAGGTTTCTCGGCGGCAATGACTCGCGACATGAAGGCGATGGTGTTGA
FD534371       <-- GTCAGGTTTCTCGGCGGCAATGACTCGCGACATGAAGGCGATGGTGTTGA
EY919636       --> ..................................................
FD546126       --> ..................................................
FD547001       --> ..................................................
EX776836       --> ..................................................
EV533036       --> ..................................................
EY912007       --> ..................................................
FD960708       --> ..................................................

               1151   -   1201
UN20068        --> GGTCGGAGCAGCTAAACCAGTACTGGATAAGAGAAACATCGCTACACCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- ..................................................
FY428061       <-- GGTCGGAGCAGCTAAACCAGTACTGGATAAGAGAAACATCGCTACACCAA
FY431663       <-- GGTCGGAGCAGCTAAACCAGTACTGGATAAGAGAAACATCGCTACACCAA
FD964802       <-- GGTCGGAGCAGCTAAACCAGTACTGGATAAGAGAAACATCGCTACACCAA
FY432453       <-- GGTCGGAGCAGCTAAACCAGTACTGGATAAGAGAAACATCGCTACACCAA
FY428066       <-- GGTCGGAGCAGCTAAACCAGTACTGGATAAGAGAAACATCGCTACACCAA
EX772992       <-- GGACGGAGCAGCTAAACCAGTACTGGATAAGAGAAACATCGCTACACCAA
EY941932       <-- GGTCGGAGCAGCTAAACCAGTACTGGATAAGAGAAACATCGCTACACCAA
EV529239       <-- GGTCGGAGCAGCTAAACCAGTACTGGATAAGAGAAACATCGCTACACCAA
EY916308       <-- GGTCGGAGCAGCTAAACCAGTACTGGATAAGAGAAACATCGCTACACCAA
FY428641       <-- GGTCGGAGCAGCTAAACCAGTACTGGATAAGAGAAACATCGCTACACCAA
FD534371       <-- GGTCGGAGCAGCTAAACCAGTACTGGATAAGAGAAACATCGCTACACCAA
EY919636       --> ..................................................
FD546126       --> ..................................................
FD547001       --> ..................................................
EX776836       --> ..................................................
EV533036       --> ..................................................
EY912007       --> ..................................................
FD960708       --> ..................................................

               1201   -   1251
UN20068        --> GTACTCTTGCCGTTTGCGTAGTGCATATCCGCCACTTGCAGTATCTTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- ..................................................
FY428061       <-- GTACTCTTGCCGTTTGCGTAGTGCATATCCGCCACTTGCAGTATCTTGAA
FY431663       <-- GTACTCTTGCCGTTTGCGTAGTGCATATCCGCCACTTGCAGTATCTTGAA
FD964802       <-- GTACTCTTGCCGTTTGCGTAGTGCATATCCGCCACTTGCAGTATCTcc..
FY432453       <-- GTACTCTTGCCGTTTGCGTAGTGCATATCCGCCACTTGCAGTATCTTGAA
FY428066       <-- GTACTCTTGCCGTTTGCGTAGTGCATATCCGCCACTTGCAGTATCTTGAA
EX772992       <-- GTACTCTTGCCGTTTGCGTAGTGCATATCCGCCACTTGCAGTATCCTGAA
EY941932       <-- GTACTCTTGCCGTTTGCGTAGTGCATATCCGCCACTTGCAGTATCTTGAA
EV529239       <-- GTACTCTTGCCGTTTGCGTAGTGCATATCCGCCACTTGCAGTATCTTGAA
EY916308       <-- GTACTCTTGCCGTTTGCGTAGTGCATATCCGCCACTTGCAGTATCTTGAA
FY428641       <-- GTACTCTTGCCGTTTGCGTAGTGCATATCCGCCACTTGCAGTATCTTGAA
FD534371       <-- GTACTCTTGCCGTTTGCGTAGTGCATATCCGCCACTTACAGTATCTTGAA
EY919636       --> ..................................................
FD546126       --> ..................................................
FD547001       --> ..................................................
EX776836       --> ..................................................
EV533036       --> ..................................................
EY912007       --> ..................................................
FD960708       --> ..................................................

               1251   -   1301
UN20068        --> TTGGCCGTTCAGGCCGAAACTGAGTTTCCGACCTTGTGCTGATGCTGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428061       <-- TTGGCCGTTCAGGCCGAAACTGAGTTTCCGACCTTGTGCTGATGCTGGAA  Raphanus sativus cv GSK3-1
FY431663       <-- TTGGCCGTTCAGGCCGAAACTGAGTTTCCGACCTTGTGCTGATGCTGGAA  Raphanus sativus cv GSK3-1
FD964802       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY432453       <-- TTGGCCGTTCAGGCCGAAACTGAGTTTCCGACCTTGTGCTGATGCTGGAA  Raphanus sativus cv GSK3-1
FY428066       <-- TTGGCCGTTCAGGCCGAAACTGAGTTTCCGACCTTGTGCTGATGCTGGAA  Raphanus sativus cv GSK3-1
EX772992       <-- TTGGCCGTTCACGCCGAAACTGAGTTTCCGACCTTGTGCTGATGCTGGAA  Raphanus raphanistrum subsp. landra
EY941932       <-- TTGGCCGTTCACGCCGAAACTGAGTTTCCGACCTTGTGCTGATGCTGGAA  Raphanus sativus cv Early Scarlet Globe
EV529239       <-- TTGGCCGTTCACGCCGAAACTGAGTTTCCGACCTTGTGCTGATGCTGGAA  Raphanus raphanistrum subsp. maritimus
EY916308       <-- TTGGCCGTTCACGCCGAAACTGAGTTTCCGACCTTGTGCTGATGCTGGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY428641       <-- TTGGCCGTTCAGGCCGAAACTGAGTTTCCGACCTTGTGCTGATGCTGGAA  Raphanus sativus cv GSK3-1
FD534371       <-- TTGGCCGTTCACGCCGAAACTGAGTTTCCGACCTTGTGATGATGCTGGAA  Raphanus raphanistrum subsp. maritimus
EY919636       --> ..................................................  Raphanus raphanistrum subsp. landra
FD546126       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547001       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776836       --> ..................................................  Raphanus raphanistrum subsp. landra
EV533036       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY912007       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960708       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               1301   -   1351
UN20068        --> CCGGAGCAAAACAGAGACCAACCAAAGACACGGAGAGGAGAAAGAAGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- ..................................................
FY428061       <-- CCGGAGCAAAACAGAGACCAACCAAAGACACGGAGAGGAGAAAGAAGTCA
FY431663       <-- CCGGAGCAAAACAGAGACCAACCAAAGACACGGAGAGGAGAAAGAAGTCA
FD964802       <-- ..................................................
FY432453       <-- CCGGAGCAAAACAGAGACCAACCAAAGACACGGAGAGGAGAAAGAAGTCA
FY428066       <-- CCGGAGCAAAACAGAGACCAACCAAAGACACGGAGAGGAGAAAGAAGTCA
EX772992       <-- CCGGAGCAAAACAGAGACCAACCAAAGACACGGAGAGGAGAAAGAAGTCA
EY941932       <-- CCGGAACAAAACAGAGACCAACCAAAGACACGGAGAGGAGAAAGAAGTCA
EV529239       <-- CCGGAGCAAAACAGAGACCAACCAAAGACACGGAGAGGAGAAAGAAGTCA
EY916308       <-- CCGGAGCAAAACAGAGACCAACCAAAGACACGGAGAGGAGAAAGAAGTCA
FY428641       <-- CCGGAGCAAAACAGAGACCAACCAAAGACACGGAGAGGAGAAAGAAGTCA
FD534371       <-- CCGGAGCAAAACAGAGACCAACCGAAGACACGGAGAGGAGAAAGAAGTCA
EY919636       --> ..................................................
FD546126       --> ..................................................
FD547001       --> ..................................................
EX776836       --> ..................................................
EV533036       --> ..................................................
EY912007       --> ..................................................
FD960708       --> ..................................................

               1351   -   1401
UN20068        --> AACACGCTTGTTTTTGTTTTGTTGTCCGCCATTGTTATGGCTCCAATAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- ..................................................
FY428061       <-- AACACGC...........................................
FY431663       <-- AACACGC...........................................
FD964802       <-- ..................................................
FY432453       <-- AACACGCT..........................................
FY428066       <-- AACACGC...........................................
EX772992       <-- AACACGCTTGTTTTTGTTTTGTTGTCCGCCATTttcc.............
EY941932       <-- AACACGCTTGTTTTTGTTTTGTTGTCCGCCATTGTTATGGCTCCAATA..
EV529239       <-- AACACGCTTGTTTTTGTTTTGTTGTCCGCCATTGTTATGGCTCCAATAAA
EY916308       <-- AACACGCTTGTTTTTGTTTTGTTGTCCGCCATTGTTATGGCTCCAATAAA
FY428641       <-- AACACGC...........................................
FD534371       <-- AACACGCTTGTTTTTGTTTTGTTGTCCGCCATTGTTATGGCTCCAATAAA
EY919636       --> ..................................................
FD546126       --> ..................................................
FD547001       --> ..................................................
EX776836       --> ..................................................
EV533036       --> ..................................................
EY912007       --> ..................................................
FD960708       --> ..................................................

               1401   -   1451
UN20068        --> GTCGAGAAGGTGGCCTTGATTTTAGTCTCATAGCATAAATATATAAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD550150       <-- ..................................................
FY428061       <-- ..................................................
FY431663       <-- ..................................................
FD964802       <-- ..................................................
FY432453       <-- ..................................................
FY428066       <-- ..................................................
EX772992       <-- ..................................................
EY941932       <-- ..................................................
EV529239       <-- GTCGAGAAGGTGGCCc..................................
EY916308       <-- GTCGAGAAGGTGGACTTGATTTTAGTCTCATAGCATAAATATATAAACAA
FY428641       <-- ..................................................
FD534371       <-- GTCGAGAAGGTGcc....................................
EY919636       --> ..................................................
FD546126       --> ..................................................
FD547001       --> ..................................................
EX776836       --> ..................................................
EV533036       --> ..................................................
EY912007       --> ..................................................
FD960708       --> ..................................................

               1451   -   1501
UN20068        --> TTTTGTGTC
                   ~~~~~~~~~
FD550150       <-- .........
FY428061       <-- .........
FY431663       <-- .........
FD964802       <-- .........
FY432453       <-- .........
FY428066       <-- .........
EX772992       <-- .........
EY941932       <-- .........
EV529239       <-- .........
EY916308       <-- TTTTGTGTC
FY428641       <-- .........
FD534371       <-- .........
EY919636       --> .........
FD546126       --> .........
FD547001       --> .........
EX776836       --> .........
EV533036       --> .........
EY912007       --> .........
FD960708       --> .........