1      -     51
UN20082        --> GGGACTTATCAGATCGTTGTTGACATAAGTAATTGGGCTCTCTCTCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943017       <-- ........................ATAAGTAATTGGGCTCTCTCTCTCTC
EX752791       <-- ..................................................
EV545689       <-- ..................................................
FD947004       --> GGGACTTATCAGATCGTTGTTGACATAAGTAATTGGGCTCTCTCTCTCTC
FD561097       --> .....ggATCAGATCGTTGTTGACATAAGTAATTGGGCTCTCTCTCTCTC
EY933608       --> .......................ggggctttctctctctttctcggTCTC
EX748990       --> ..................................................
EV550381       --> ..................................................
FY430244       --> ..................................................
FD532100       --> ..................................................

               51     -    101
UN20082        --> TCTCGCAAATCTTCAGACAGGTTTTGTCTCTTTGCGATCAGATCTCATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943017       <-- TCTCGCAAATCTT-AGACAGGTTTTGTCTCTTTGCGATCAGATCTCATCG
EX752791       <-- ..................................................
EV545689       <-- ..................................................
FD947004       --> TCTCGCAAATCTT-AGACAGGTTTTGTCTCTTTGCGATCAGATCTCATCG
FD561097       --> TC--GCAAATCTTCAGACAGGTTTTGTCTCTTTGCGATCAGATCTCATCG
EY933608       --> TCTCGCAAATATTCAAACAGGTTTTGTCTATTTGCGATCAGATCTCATCG
EX748990       --> ................ggAGGTTTTGTCTCTTTGCGATCAGATCTCATCG
EV550381       --> ...............gggaaGTTTTGTCTCTTTGCGATCAGATCTCATCG
FY430244       --> ..............................TTTGCGATCAGATCTCATCG
FD532100       --> .......................................gGATCTCATCG

               101    -    151
UN20082        --> AAGACGAGTGCGATGGCTTCAGGTTTCAGCGGAGATGAAACTGCTCCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943017       <-- AAGACGAGTGCGATGGCTTCAGGTTTCAGCGGAGATGAAACTGCTCCTTT
EX752791       <-- ..................................................
EV545689       <-- ..................................................
FD947004       --> AAGACGAGTGCGATGGCTTCAGGTTTCAGCGGAGATGAAACTGCTCCTTT
FD561097       --> AAGACGAGTGCGATGGCTTCAGGTTTCAGCGGAGATGAAACTGCTCCTTT
EY933608       --> AAGACGAGGGCGATGGCTTCAGGTTTCAGCGGAGATGAAACTGCTCCTTT
EX748990       --> AAGACGAGTGCGATGGCTTCAGGTTTCGGCGGAGATGAAACTGCTCCTTT
EV550381       --> AAGACGAGTGCGATGGCTTCAGGTTTCAGCGGAGATGAAACTGCTCCTTT
FY430244       --> AAGACGAGTGCGATGGCTTCAGGTTTCAGCGGAGATGAAACTGCTCCTTT
FD532100       --> AAGACGAGTGCGATGGCTTCAGGTTTCAGCGGAGATGAAACTGCTCCTTT

               151    -    201
UN20082        --> CTTCGGATTCCTCGGCGCTGCCGCCGCTCTCGTTTTCTCCTGCATGGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943017       <-- CTTCGGATTCCTCGGCGCTGCCGCCGCTCTCGTTTTCTCCTGTATGGGAG  Raphanus sativus cv Early Scarlet Globe
EX752791       <-- .............GGCGCTGCCGCCGCTCTCGTTTTCTCCTGCATGGGAG  Raphanus raphanistrum subsp. maritimus
EV545689       <-- ................................TTTTCTCCTGCATGGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947004       --> CTTCGGATTCCTCGGCGCTGCCGCCGCTCTCGTTTTCTCCTGTATGGGAG  Raphanus sativus cv Early Scarlet Globe
FD561097       --> CTTCGGATTCCTCGGCGCTGCCGCCGCTCTCGTTTTCTCCTGTATGGGAG  Raphanus sativus var. oleiformis
EY933608       --> CTTCGGATTCCTCGGCGCTGCCGCCGCTCTCGTTTTCTCCTGCATGGGAG  Raphanus sativus var. oleiformis
EX748990       --> CTTCGGATTCCTCGGCGCTGCCGCCGCTCTCGTTTTCTCCTGCATGGGAG  Raphanus raphanistrum subsp. maritimus
EV550381       --> CTTCGGATTCCTCGGCGCTGCCGCCGCTCTCGTTTTCTCCTGCATGGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430244       --> CTTCGGATTCCTCGGCGCTGCCGCCGCTCTCGTTTTCTCCTGCATGGGAG  Raphanus sativus cv GSK3-1
FD532100       --> CTTCGGATTCCTCGGCGCTGCCGCCGCTCTCGTTTTCTCCTGTATGGGAG  Raphanus raphanistrum subsp. maritimus

               201    -    251
UN20082        --> CAGCGTACGGGACGGCAAAGAGCGGGGTTGGCGTGGCGTCGATGGGTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943017       <-- CAGCGTACGGGACAGCAAAGAGCGGGGTAGGCGTGGCGTCGATGGGTGTG  Raphanus sativus cv Early Scarlet Globe
EX752791       <-- CAGCGTACGGGACGGCAAAGAGCGGGGTTGGCGTGGCGTCGATGGGTGTG  Raphanus raphanistrum subsp. maritimus
EV545689       <-- CAGCGTACGGGACGGCAAAGAGCGGGGTTGGCGTGGCGTCGATGGGTGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947004       --> CAGCGTACGGGACAGCAAAGAGCGGGGTAGGCGTGGCGTCGATGGGTGTG  Raphanus sativus cv Early Scarlet Globe
FD561097       --> CAGCGTACGGGACAGCAAAGAGCGGGGTAGGCGTGGCGTCGATGGGTGTG  Raphanus sativus var. oleiformis
EY933608       --> CAGCGTACGGGACGGCAAAGAGCGGGGTTGGCGTGGCGTCGATGGGTGTG  Raphanus sativus var. oleiformis
EX748990       --> CAGCGTACGGGACGGCAAAGAGCGGGGTTGGCGTGGCGTCGATGGGTGTG  Raphanus raphanistrum subsp. maritimus
EV550381       --> CAGCGTACGGGACGGCAAAGAGCGGGGTTGGCGTGGCGTCGATGGGTGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430244       --> CAGCGTACGGGACGGCAAAGAGCGGGGTTGGCGTGGCGTCGATGGGTGTG  Raphanus sativus cv GSK3-1
FD532100       --> CAGCGTACGGGACAGCAAAGAGTGGGGTAGGCGTGGCGTCGATGGGTGTA  Raphanus raphanistrum subsp. maritimus

               251    -    301
UN20082        --> ATGAGACCAGAGCTTGTGATGAAATCGATTGTTCCGGTGGTCATGGCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943017       <-- ATGAGACCAGAGCTTGTGATGAAATCGATTGTCCCGGTGGTCATGGCTGG  Raphanus sativus cv Early Scarlet Globe
EX752791       <-- ATGAGACCAGAGCTTGTGATGAAATCGATTGTTCCGGTGGTCATGGCTGG  Raphanus raphanistrum subsp. maritimus
EV545689       <-- ATGAGACCAGAGCTTGTGATGAAATCGATTGTTCCGGTGGTCATGGCTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947004       --> ATGAGACCAGAGCTTGTGATGAAATCGATTGTCCCGGTGGTCATGGCTGG  Raphanus sativus cv Early Scarlet Globe
FD561097       --> ACGAGACCAGAGCTTGTGATGAAATCGATTGTCCCGGTGGTCATGGCTGG  Raphanus sativus var. oleiformis
EY933608       --> ATGAGACCAGAGCTTGTGATGAAATCGATTGTTCCGGTGGTCATGGCTGG  Raphanus sativus var. oleiformis
EX748990       --> ATGAGACCAGAGCTTGTGATGAAATCGATTGTTCCGGTGGTCATGGCTGG  Raphanus raphanistrum subsp. maritimus
EV550381       --> ATGAGACCAGAGCTTGTGATGAAATCGATTGTTCCGGTGGTCATGGCTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430244       --> ATGAGACCAGAGCTTGTGATGAAATCGATTGTTCCGGTGGTCATGGCTGG  Raphanus sativus cv GSK3-1
FD532100       --> ATGAGACCAGAGCTTGTGATGAAATCGATCGTCCCGGTGGTTATGGCTGG  Raphanus raphanistrum subsp. maritimus

               301    -    351
UN20082        --> TGTGTTAGGTATTTACGGTCTCATCATAGCTGTCATCATCAGTACCGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943017       <-- TGTGTTAGGTATTTACGGTCTCATCATAGCTGTCATCATCAGTACCGGAA
EX752791       <-- TGTGTTAGGTATTTACGGTCTCATCATAGCTGTCATCATCAGTACCGGAA
EV545689       <-- TGTGTTAGGTATTTACGGTCTCATCATAGCTGTCATCATCAGTACCGGAA
FD947004       --> TGTGTTAGGTATTTACGGTCTCATCATAGCTGTCATCATCAGTACCGGAA
FD561097       --> TGTGTTAGGTATTTACGGTCTCATCATAGCTGTCATCATCAGTACCGGAA
EY933608       --> TGTGTTAGGTATTTACGGTCTCATCATAGCTGTCATCATCAGTACCGGAA
EX748990       --> TGTGTTAGGTATTTACGGTCTCATCATAGCTGTCATCATCAGTACCGGAA
EV550381       --> TGTGTTAGGTATTTACGGTCTCATCATAGCTGTCATCATCAGTACCGGAA
FY430244       --> TGTGTTAGGTATTTACGGTCTCATCATAGCTGTCATCATCAGTACCGGAA
FD532100       --> TGTTTTAGGTATTTACGGTTTGATCATAGCTGTCATCATCAGTACCGGAA

               351    -    401
UN20082        --> TCAACCCGAAGGCCAAGTCTTACTATCTCTTCGATGGCTATGCTCATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943017       <-- TCAACCCGAAGGCCAAATCTTACTATCTCTTCGATGGTTATGCTCATCTC  Raphanus sativus cv Early Scarlet Globe
EX752791       <-- TCAACCCGAAGGCCAAGTCTTACTATTTCTTCGATGGCTATGCTCATCTT  Raphanus raphanistrum subsp. maritimus
EV545689       <-- TCAACCCGAAGGCCAAGTCTTACTATCTCTTCGATGGCTATGCTCATCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947004       --> TCAACCCGAAGGCCAAATCTTACTATCTCTTCGATGGTTATGCTCATCTC  Raphanus sativus cv Early Scarlet Globe
FD561097       --> TCAACCCGAAGGCCAAATCTTACTATCTCTTCGATGGTTATGCTCATCTC  Raphanus sativus var. oleiformis
EY933608       --> TCAACCCGAAGGCCAAATCTTACTATCTCTTCGATGGTTATGCTCATCTC  Raphanus sativus var. oleiformis
EX748990       --> TCAACCCGAAGGCCAAGTCTTACTATCTCTTCGATGGCTATGCTCATCTC  Raphanus raphanistrum subsp. maritimus
EV550381       --> TCAACCCGAAGGCCAAGTCTTACTATCTCTTCGATGGCTATGCTCATCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430244       --> TCAACCCGAAGGCCAAGTCTTACTATCTCTTCGATGGCTATGCTCATCTC  Raphanus sativus cv GSK3-1
FD532100       --> TCAACCCAAAGGCCAAGTCTTACTATCTCTTCGATGGCTATGCTCATCTC  Raphanus raphanistrum subsp. maritimus

               401    -    451
UN20082        --> TCTTCCGGTCTCGCTTGTGGTCTCGCCGGTCTCTCCGCCGGTATGGCTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943017       <-- TCTTCCGGTCTCGCTTGTGGTCTCGCCGGTCTCTCCGCCGGTATGGCTAT
EX752791       <-- TCTTCCGGTCTCGCTTGTGGTCTCGCCGGTCTCTCCGCCGGTATGGCTAT
EV545689       <-- TCTTCCGGTCTCGCTTGTGGTCTCGCCGGTCTCTCCGCCGGTATGGCTAT
FD947004       --> TCTTCCGGTCTCGCTTGTGGTCTCGCCGGTCTCTCCGCCGGTATGGCTAT
FD561097       --> TCTTCCGGTCTCGCTTGTGGTCTCGCCGGTCTCTCCGCCGGTATGGCTAT
EY933608       --> TCTTCCGGTCTCGCTTGTGGTCTCGCCGGTCTCTCCGCCGGTATGGCTAT
EX748990       --> TCTTCCGGTCTCGCTTGTGGTCTCGCCGGTCTCTCCGCCGGTATGGCTAT
EV550381       --> TCTTCCGGTCTCGCTTGTGGTCTCGCCGGTCTCTCCGCCGGTATGGCTAT
FY430244       --> TCTTCCGGTCTCGCTTGTGGTCTCGCCGGTCTCTCCGCCGGTATGGCTAT
FD532100       --> TCTTCCAGTCTCGCTTGTGGTCTCGCCGGTCTCTCCGCCGGTATGGCTAT

               451    -    501
UN20082        --> CGGAATCGTCGGCGATGCCGGTGTCAGAGCGAATGCGCAACAACCAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943017       <-- CGGAATCGTCGGCGATGCCGGTGTCAGAGCGAATGCACAACAACCAAAGC  Raphanus sativus cv Early Scarlet Globe
EX752791       <-- CGGAATCGTCGGCGATGCCGGTGTCAGAGCGAATGCGCAACAACCAAAGC  Raphanus raphanistrum subsp. maritimus
EV545689       <-- CGGAATCGTCGGCGATGCCGGTGTCATAGCGAATGCGCAACAACCAAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947004       --> CGGAATCGTCGGCGATGCCGGTGTCAGAGCGAATGCACAACAACCAAAGC  Raphanus sativus cv Early Scarlet Globe
FD561097       --> CGGAATCGTCGGCGATGCCGGTGTCAGAGCGAATGCACAACAACCAAAGC  Raphanus sativus var. oleiformis
EY933608       --> CGGAATCGTCGGCGATGCCGGTGTCAGAGCGAATGCACAACAACCAAAGC  Raphanus sativus var. oleiformis
EX748990       --> CGGAATCGTCGGCGATGCCGGTGTCAGAGCGAATGCGCAACAACCAAAGC  Raphanus raphanistrum subsp. maritimus
EV550381       --> CGGAATCGTCGGCGATGCCGGTGTCATAGCGAATGCGCAACAACCAAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430244       --> CGGAATCGTCGGCGATGCCGGTGTCAGAGCGAATGCGCAACAACCAAAGC  Raphanus sativus cv GSK3-1
FD532100       --> CGGAATCGTCGGCGATGCCGGTGTCAGAGCGAATGCACAACAACCAAAGC  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN20082        --> TGTTTGTGGGAATGATTCTGATTCTCATCTTTGCTGAAGCACTTGCGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943017       <-- TGTTTGTGGGAATGATTCTGATTCTCATCTTTGCTGAAGCACTTGCGCTT
EX752791       <-- TGTTTGTGGGAATGATTCTGATTTTCATCTTTGCTGAAGCACTTGCGCTT
EV545689       <-- TGTTTGTGGGAATGATTTTGATTCTCATCTTTGCTGAAGCACTTGCGCTT
FD947004       --> TGTTTGTGGGAATGATTCTGATTCTCATCTTTGCTGAAGCACTTGCGCTT
FD561097       --> TGTTTGTGGGAATGATTCTGATTCTCATCTTTGCTGAAGCACTTGCGCTT
EY933608       --> TGTTTGTGGGAATGATTCTGATTCTCATCTTTGCTGAAGTACTTGCGCTT
EX748990       --> TGTTTGTGGGAATGATTCTGATTCTCATCTTTGCTGAAGCACTTGCGCTT
EV550381       --> TGTTTGTGGGAATGATTCTGATTCTCATCTTTGCTGAAGCACTTGCGCTT
FY430244       --> TGTTTGTGGGAATGATTCTGATTCTCATCTTTGCTGAAGCACTTGCGCTT
FD532100       --> TGTTTGTGGGAATGATTCTGATTCTCATCTTTGCTGAAGCACTTGCGCTT

               551    -    601
UN20082        --> TACGGTCTTATTGTTGGTATCATCCTTTCTTCTCGTGCTGGTCAGTCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943017       <-- TACGGTCTTATCGTTGGTATCATCCTCTCTTCTCGTGCTGGTCAGTCTAG  Raphanus sativus cv Early Scarlet Globe
EX752791       <-- TACGGTCTTATTGTTGGTATCATCCTTTCTTCTCGTGCTGGTCAGTCTAG  Raphanus raphanistrum subsp. maritimus
EV545689       <-- TACGGTCTTATTGTTGGTATCATCCTTTCTTCTCGTGCTGGTCAGTCTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947004       --> TACGGTCTTATCGTTGGTATCATCCTCTCTTCTCGTGCTGGTCAGTCTAG  Raphanus sativus cv Early Scarlet Globe
FD561097       --> TACGGTCTTATCGTTGGTATCATCCTCTCTTCTCGTGCTGGTCAGTCTAG  Raphanus sativus var. oleiformis
EY933608       --> TACGGTCTTATCGTTGGTATCATCCTCTCTTCTCGTGCTGGTCAGTCTAG  Raphanus sativus var. oleiformis
EX748990       --> TACGGTCTTATTGTTGGTATCATCCTTTCTTCTCGTGCTGGTCAGTCTAG  Raphanus raphanistrum subsp. maritimus
EV550381       --> TACGGTCTTATTGTTGGTATCATCCTTTCTTCTCGTGCTGGTCAGTCTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430244       --> TACGGTCTTATTGTTGGTATCATCCTTTCTTCTCGTGCTGGTCAGTCTAG  Raphanus sativus cv GSK3-1
FD532100       --> TACGGTCTTATTGTTGGTATCATCCTTTCTTCTCGTGCTGGTCAGTCTAG  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN20082        --> AGCCGAGTGAACCAACCCCAGAAAATCTCTTTTCTCATGTGCTAAATTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943017       <-- AGCCGAGTGAGCCAACCCCAGAAAATCTCTTTTCTCATGTGCTAAATTCC  Raphanus sativus cv Early Scarlet Globe
EX752791       <-- AGCCGTGTGAACCAACCCCAGAAAATCTCTTTTTTCATGTGCTAAATTCC  Raphanus raphanistrum subsp. maritimus
EV545689       <-- AGCCGAGTGAACCAACCCCAGAAAATCTCTTTTCTCATGTGCTAAATTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD947004       --> AGCCGAGTGAGCCAACCCCAGAAAATCTCTTTTCTCATGTGCTAAATTCC  Raphanus sativus cv Early Scarlet Globe
FD561097       --> AGCCGAGTGAGCCAACCCCAGAAAATCTCTTTTCTCATGTGCTAAATTCC  Raphanus sativus var. oleiformis
EY933608       --> AGCCGAGTGAGCCAACCCCAGAAAATCTCTTTTCTCATGTGCTAAATTCC  Raphanus sativus var. oleiformis
EX748990       --> AGCCGTGTGAACCAACCCCAGAAAATCTCTTTTCTCATGTGCTAAATTCC  Raphanus raphanistrum subsp. maritimus
EV550381       --> AGCCGAGTGAACCAACCCCAGAAAATCTCTTTTCTCATGTGCTAAATTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY430244       --> AGCCGAGTGAACCAACCCCAGAAAATCTCTTTTCTCATGTGCTAAATTCC  Raphanus sativus cv GSK3-1
FD532100       --> AGCCGAGTGAACCAACCCCAGAAAATCTCTGTTCTCATGTGCTAAATTCC  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN20082        --> CTGTAATG-TTTTT-GATATATTTTCACTTCCAATATTCCTGGCATTGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943017       <-- CTGTAATG-TTTTT-GATATATTTTCACTTCCAATATTCCTGGCATTGCG
EX752791       <-- CTGTAATG-TTTTTTGATATATTTTCACTTCCAATATTCCTGGCATTGCG
EV545689       <-- CTGTAATGGTTTTT-GATATATTTTCACTTCCAATATTCCTGGCATTGCG
FD947004       --> CTG...............................................
FD561097       --> CTGTAATG-TTTTT-GATATATTTTCACTTCCAATATTCCTGGCATTGCG
EY933608       --> CTGTAATG-TTTTT-GATATATTTTCACTTCCAATATTCCTGGCATTGGG
EX748990       --> CTGTAATG-TTTTTTGATATATTTTCACTTCCAATATTCCTGGCATTGCG
EV550381       --> CTGTAATGGTTTTT-GATATATTTTCACTTCCAATATTCCTGGCATTGCG
FY430244       --> CTGTAATG-TTTTTTGATATATTTTCACTTCCAATATTCCTGGCATTGCG
FD532100       --> CTGTAATG-TTTTT-GATATATTTTCACTTCCAATATTCCTGGCATTGCG

               701    -    751
UN20082        --> AGTTTCTCATGTAAAAACAAGCTAAATCACTTGATTTTGGTTCTAAATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943017       <-- AGTTTCTCATGTAAAAACAAGCTAAATCACTTGATTTGGGTTCTAAATGT
EX752791       <-- AGTTTCTCATGTAAAAACAAGCTAAATCACTTGATTTTGGTTCTAAATGT
EV545689       <-- AGTTTCTCATGTAAAAACAAGCTAAATCACTTGATTTTGGTTCTTAATGT
FD947004       --> ..................................................
FD561097       --> AGTTTCTCATGTAAAA-CAAGCTAAATCACTTGATTTGGGTTCTAAATGT
EY933608       --> AGTTTCTCATG.......................................
EX748990       --> AGTTTCTCATGTAAAA-CAAGCTAAATCACTTGATTTTGGTTCTAAATGT
EV550381       --> AGTTTCTCATGT......................................
FY430244       --> AGTTTCTCATGTAAAAACAAGCTAAATCACTTGATTTTGGTTCTAAATGT
FD532100       --> AGTTTCTCATGTAAAAACAAGCTAAATCACTTGATTTTGGTTCTAAATGT

               751    -    801
UN20082        --> TATTTTTTT--C-TTTAATTAGCACAATTTATGGGACATCAATAAGTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943017       <-- TATTTTTTT--C-TTTAATTAGCACAATTTATGGGACATCAATAAGTAAT
EX752791       <-- TATTTTTTT--CCTTTAAT...............................
EV545689       <-- TATTTTTTT-TC-TTTAATTAGCACAATTTATGGGACATCAATAAGTAAT
FD947004       --> ..................................................
FD561097       --> TATTTTT...........................................
EY933608       --> ..................................................
EX748990       --> TA................................................
EV550381       --> ..................................................
FY430244       --> TATTTTTTTTTC-TTTAATTAGCACAATTTATGGGACATCAATAAGTAAT
FD532100       --> TATTTTTTTtcttt....................................

               801    -    851
UN20082        --> AATAGGATGCTGATTCGGTGATTTGACTCTTTCGACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD943017       <-- AATAGGATGATGATTCGGT...................
EX752791       <-- ......................................
EV545689       <-- AATAGGATGCTGATTC......................
FD947004       --> ......................................
FD561097       --> ......................................
EY933608       --> ......................................
EX748990       --> ......................................
EV550381       --> ......................................
FY430244       --> AATAGGATGCTGATTCGGTGATTTGACTCTTTCGACTG
FD532100       --> ......................................