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Alignment for radish unigene UN20088

               1      -     51
UN20088        --> AACTGGTCACTGGTAGTGGTACCATATATATATCAATTTCACATACACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565923       <-- .....ctttcaactggtcattggtaccATATATCAATTTCACATACACAT
EV537193       <-- ..................................................
EX896667       <-- ..................................................
EX764859       <-- ..................................................
EW717777       <-- ..................................................
FD981966       <-- ..................................................
EX750120       <-- ..................................................
FD534432       <-- ..................................................
FD939173       <-- ..................................................
EX906251       <-- ..................................................
EX768697       --> AACTGGTCACTGGTAGTGGTACCATATATATATCAATGCCACATACACAT
EW720547       --> .................cattggtaccATATATCAATTTCACATACACAT
EY926356       --> .........cggctggtcattggtaacATATATCAATTTCACATACACAT
FD935355       --> .........caactggtcattggtaccATATATCAATTTCACATACACAT
FD977629       --> .....................ggtaccATATATCAATTTCACATACACAT
EX753662       --> .................................................c
FD983941       --> ..................................................

               51     -    101
UN20088        --> GGAACAATGTCAAAATACTATTAATACACACTGTAACACTTCCCCACCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565923       <-- GGAACAATGTCAAAATACTATTAATACACACTGTAACACTTCCCCACCAT
EV537193       <-- ..................................................
EX896667       <-- ..................................................
EX764859       <-- ..................................................
EW717777       <-- ..................................................
FD981966       <-- ..................................................
EX750120       <-- ..................................................
FD534432       <-- ..................................................
FD939173       <-- ..................................................
EX906251       <-- ..................................................
EX768697       --> GGAACAATGTCAAAATACTATTAATACACACTGTAACACTTCCCCACCAT
EW720547       --> GGAACAATGTCAAAATACTATTAATACACACTGTAACACTTCCCCACCAT
EY926356       --> GGAACAATGTCAAAATACTATTAATACACACTGTAACACTTCCCCACCAT
FD935355       --> GGAACAATGTCAAAATACTATTAATACACACTGTAACACTTCCCCACCAT
FD977629       --> GGAACAATGTCAAAATACTATTAATACACACCGTAACACTTCCCCACCAT
EX753662       --> GGAACAATGTCAAAATACTATTAATACACACTGTAACACTTCCCCACCAT
FD983941       --> GGAACAATGTCAAAATACTATTAATACACACTGTAACACTTCCCCACCAT

               101    -    151
UN20088        --> ATACAACAATAAGATTACACATTTACCACTGAAGAGTGCTTTGTTTGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565923       <-- ATACAACAATAAGATTACACATTTACCACTGAAGAGTGCTTTGTTTGCTG
EV537193       <-- ..................................................
EX896667       <-- ..................................................
EX764859       <-- ..................................................
EW717777       <-- ..................................................
FD981966       <-- ..................................................
EX750120       <-- ..................................................
FD534432       <-- ..................................................
FD939173       <-- ..................................................
EX906251       <-- ..................................................
EX768697       --> ATACAACAATAAGATTACACATTTACCACTGAAGAGTGCTTTGTTTGCTG
EW720547       --> ATACAACAATAAGATTACACATTTACCACTGAAGAGTGCTTTGTTTGCTG
EY926356       --> ATACAACAATAAGATTACACATTTACCACTGAAGAGTGCTTTGTTTGCTG
FD935355       --> ATACAACAATAAGATTACACATTTACCACTGAAGAGTGCTTTGTTTGCTG
FD977629       --> ATACAACAATAACATTACACATTTACCACTGAAGAGTGCTTTGTTTGCTG
EX753662       --> ATACAACAATAAGATTACACGTTTACCACTGAAGAGTGCTTTGTTTGCTG
FD983941       --> ATACAACAATAAGATTACACATTTACCACTGAAGAGTGCTTTGTTTGCTG

               151    -    201
UN20088        --> GAGCAATTGCTCGAACTCCTCATCAGTGCTCTTAAGCATCAACGACAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565923       <-- GAGCAATTGCTCGAACTCCTCATCAGTGCTCTTAAGCATCAACGACAACG
EV537193       <-- ..................................................
EX896667       <-- ..................................................
EX764859       <-- ..................................................
EW717777       <-- ..................................................
FD981966       <-- ..................................................
EX750120       <-- ..................................................
FD534432       <-- ..................................................
FD939173       <-- ..................................................
EX906251       <-- ..................................................
EX768697       --> GAGCAATTGCTCAAACTCCTCATCAGTGCTCTTAAGCATCAACGACAACG
EW720547       --> GAGCAATTGCTCGAACTCCTCATCAGTGCTCTTAAGCATCAACGACAACG
EY926356       --> GAGCAATTGCTCGAACTCCTCATCAGTGCTCTTAAGCATCAACGACAACG
FD935355       --> GAGCAATTGCTCGAACTCCTCATCAGTGCTCTTAAGCATCAACGACAACG
FD977629       --> GAGCAATTGCTCGAACTCCTCATCAGTGCTCTTAAGCATCAACGACAACG
EX753662       --> GAGCAATTGCTCAAACTCCTCATCAGTGCTCTTAAGCATCAACGACAACG
FD983941       --> GAGCAATTGCTCAAACTCCTCATCAGTGCTCTTAAGCATCAACGACAACG

               201    -    251
UN20088        --> GCAATTCCAAACCTCTCTCCATCGACTCCAGGTGCCTAGGCTTTATCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565923       <-- GCAATTCCAAACCTCTCTCCATCGACTCCAGGTGCCTAGGCTTTATCCTT  Raphanus raphanistrum subsp. landra
EV537193       <-- .......................GACTCCACGTGC-TCGGCTTTATCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896667       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX764859       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717777       <-- ..................................................  Raphanus sativus var. oleiformis
FD981966       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX750120       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD534432       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD939173       <-- ..................................................  Raphanus sativus var. oleiformis
EX906251       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX768697       --> GCAATTCCAAGCCTCTCTCCATCGACTCCAGGTGCCTAGGCTTTATCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720547       --> GCAATTCCAAACCTCTCTCCATCGACTCCAGGTGCCTCGGCTTTATCCTT  Raphanus sativus var. oleiformis
EY926356       --> GCAATTCCAAACCTCTCTCCATCGACTCCAGGTGCCTCGGCTTTATCCTT  Raphanus sativus var. oleiformis
FD935355       --> GCAATTCCAAACCTCTCTCCATCGACTCCAGGTGCCTCGGCTTTATCCTT  Raphanus sativus var. oleiformis
FD977629       --> GCAATTCCAAACCTCTCTCCATCGACTCCAGGTGCCTAGGCTTTATCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753662       --> GCAATTCCAAACCTCTCTCCATCGACTCCAGGTGCCTAGGCTTTATCCTT  Raphanus raphanistrum subsp. maritimus
FD983941       --> GCAATTCCAAACCTCTCTCCATCGACTCCAGGTGCCTAGGCTTTATCCTT  Raphanus raphanistrum subsp. landra

               251    -    301
UN20088        --> TTCTCTAGACTGAACGCAAAATACTGCGGAAACTCCTTCAGATTCTCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565923       <-- TTCTCTAGACTGAACGCAAAATACTGCGGAAACTCCTTCAGATTCTCCAG
EV537193       <-- TTCTCTAGACTGAACGCAAAATACTGCGGAAACTCCTTCAGACTCTCCAG
EX896667       <-- .....................................TCAGATTCTCCAG
EX764859       <-- .................................................G
EW717777       <-- ..................................................
FD981966       <-- ..................................................
EX750120       <-- ..................................................
FD534432       <-- ..................................................
FD939173       <-- ..................................................
EX906251       <-- ..................................................
EX768697       --> TTCTCTAGACTGAACGCAAAA--CTGCGGAAACTCCTTCAGATTCTCCAG
EW720547       --> TTCTCTAGACTGAACGCAAAATACTGCGGAAACTCCTTCAGACTCTCCAC
EY926356       --> TTCTCTAGACTGAACGCAAAATACTGCGGAAACTCCTTCA..........
FD935355       --> TTCTCTAGACTGAACGCAAAATACTGCGGAAACTCCTTCAGACTCTCCAC
FD977629       --> TTCTCTAGACTGAACGCAAAATACTGCGGAAACTCCTTCAGATTCTCCAG
EX753662       --> TTCTCTAGACTGAACGCAAAATACTGCGGAAACTCCTTCAGATTCTCCAG
FD983941       --> TTCTCTAGACTGAACGCAAAATACTGCGGAAACTCCTTCAGATTCTCCAG

               301    -    351
UN20088        --> TCTACCTTTGATCTCGCACATGAAGTAATCGAGCTTCGGTTTAAAGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565923       <-- TCTACCTTTGATCTCGCACATGAAGTAATCGAGCTTCGGTTTAAAGTTGT  Raphanus raphanistrum subsp. landra
EV537193       <-- TCTACCTTTGATCTCGCACATGAAGTAATCGAGCTTTGGTTTAAAGTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896667       <-- TCTAC-TTTGATCTCGCACATGAAGTAATCGAGCTTCGGTTTAAAGTTGT  Raphanus sativus cv Early Scarlet Globe
EX764859       <-- TCTACCTATGATCTCGCGCATGAAGTA-TCGAGCT-CGGTTTAAAGT-G-  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717777       <-- ..............CGCACATGA-GTAATCGAGCT-CGGTT-AAAGTTGT  Raphanus sativus var. oleiformis
FD981966       <-- .......................................TTTAAAGTTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX750120       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD534432       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD939173       <-- ..................................................  Raphanus sativus var. oleiformis
EX906251       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX768697       --> TCTACCTATGATCTCGCGCATGAAGTAATCGAGCTTCGGTTTAAAGTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720547       --> TCTACCTTTGATCTCGCACATGAAGTAATCGAGCTTCGGTTTAAAGTTGT  Raphanus sativus var. oleiformis
EY926356       --> ..................................................  Raphanus sativus var. oleiformis
FD935355       --> TCTACCTTTGATCTCGCACATGAAGTAATCGAGCTTCGGTTTAAAGTTGT  Raphanus sativus var. oleiformis
FD977629       --> TCTACCTTTGATCTCTCCCATGAAGCAATCAAGCTTTGGTTTAAAGTTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753662       --> TCTACCTTTGATCTCGCGCATGAAGTAATCGAGCTTCGGTTTAAAGTTGT  Raphanus raphanistrum subsp. maritimus
FD983941       --> TCTACCTTTGATCTCGCGCATGAAGTAATCGAGCTTCGGTTTAAAGTTGT  Raphanus raphanistrum subsp. landra

               351    -    401
UN20088        --> TCTCTATGCTGAATGTGAACAGAGCTGGACATCTAAGGATCATTCCAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565923       <-- TCTCTATGCTGAATGTGAACAGAGCTGGACATCTAAGTATCATTCCAATC
EV537193       <-- TCTCTATGCTGAATGTGAACAGAGCTGGACATCTAAGTATCATTCCAATC
EX896667       <-- TCTCTATGCTGAATGTGAACAGAGCTGGACATCTAAGGATCATTCCAATC
EX764859       <-- TCTCTATGCTGAATGTGAACAGAGCTGGACATCTAAGGATCATTCCAATC
EW717777       <-- -CTCTATGCTGAATGTGAGCAGAGCTGGACATCTAAGGATCATTCCAATC
FD981966       <-- TCTCTATGCTGAATGTGAACAGAGCCAGACATCTAAGGATCATTCCAATC
EX750120       <-- .........................................ATTCCAATC
FD534432       <-- ..................................................
FD939173       <-- ..................................................
EX906251       <-- ..................................................
EX768697       --> TCTCTATGCTGAATGTGAACAGAGCTGGACATCTAAGGATCATTCCAATC
EW720547       --> TCTCTATGCTGAATGTGAGCAGAGCTGGACATCTAAGGATCATTCCAATC
EY926356       --> ..................................................
FD935355       --> TCTCTATGCTGAATGTGAACAGAGCTGGACATCTAAGGATCATTCCAATC
FD977629       --> TCTCTATGCTGAATGTGAACAGAGCCAGACATCTAAGGATCATTCCAATC
EX753662       --> TCTCTATGCTGAATGTGAACAGAGCTGGACATCTAAGGATCATTCCAATC
FD983941       --> TCTCTATGCTGAATG-GAACAGAGCTGGACATCTAAGGATCATTCCAATC

               401    -    451
UN20088        --> GCCTCTGATCTCGTAAACCCTATACTCTCCAAGAATCTAAGCTTTGGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565923       <-- GCCTCTGATCTCGTGAACCCTATACTCTCCAAGAATCTAAGCTTTGGGAT
EV537193       <-- GCCTCTGATCTCGTAAACCCTATACTCTCCAAGAACCTAAGCTTTGGGAT
EX896667       <-- GCCTCTGATCTCGTAAACCCTATACTCTCCAAGAATCTAAGCTTTGGGAT
EX764859       <-- GC-TCTGATCTCGTAAACCCTATACTCTCCAAGAATCTAAGCTTTGGGAT
EW717777       <-- GC-TCTGATCTCGTAAACCCTATACTCTCCAAGAATCTAAGCTTTGGGAT
FD981966       <-- GCTTCTGATCTCGTAAACCCTATACTCTCCAAGAATCTAAGCTTTGGGAT
EX750120       <-- GCCTCTGATCTCGTAAACCCTATACTCTCCAAGAATCTAAGCTTTGGGAT
FD534432       <-- ..................................................
FD939173       <-- ..................................................
EX906251       <-- ..................................................
EX768697       --> GCCTCTGATCTCGTAAACCCTATACTCTCCAAGAATCTAAGCTTTGGGAT
EW720547       --> GCCTCTGATCTCGTAAACCCTATACTCTCCAAGAATCTAAGCTTTGGGAT
EY926356       --> ..................................................
FD935355       --> GCCTCTGATCTCGTAAACCCTATACTCTCCAAGAATCTAAGCTTTGGGAT
FD977629       --> GCTTCTGATCTCGTAAACCCTATACTCTCCAAGAATCTAAGCTTTGGGAT
EX753662       --> GCCTCTGATCTCGTAAACCCTATACTCTCCAAGAATCTAAGCTTTGGGAT
FD983941       --> GCCTCTGATCTCGTAAACCCTATACTCTCCAAGAATCTAAGCTTTGGGAT

               451    -    501
UN20088        --> GAGAGTGTGTTCAACACTAGACACCAACAAGACAGGATCCTGGTAAGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565923       <-- GAGAGTGTGTTCAACACTAGACACCAACAAGACAGGATCCTGGTAAGCAc  Raphanus raphanistrum subsp. landra
EV537193       <-- GAGAGTGTGTTCAACACTAGAGACCAACAAGACAGGATCCTGGTAAGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896667       <-- GAGAGTGTGTTCAACACTAGACACCAACAAGACAGGATCCTGGTAAGCAA  Raphanus sativus cv Early Scarlet Globe
EX764859       <-- GAGAGTGTGTTCAACACTAGACACCAACAAGACAGGATCCTGGTAAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717777       <-- GAGAGTGTGTTCAACACTAGAGACCAACAAGACAGGATCTTGGTAAGCAA  Raphanus sativus var. oleiformis
FD981966       <-- GAGAGTGTGTTCAACACTAGAGACCAACAAGACAGGATCTTGGTAAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX750120       <-- GAGAGTGTGTTCAACACTAGACACCAACAAGACTGGATCCTGGTAAGCAA  Raphanus raphanistrum subsp. maritimus
FD534432       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD939173       <-- ..................................................  Raphanus sativus var. oleiformis
EX906251       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX768697       --> GAGAGTGTGTTCAACACTAGACACCAACAAGACAGGATCCTGGTAAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720547       --> GAGAGTGTGTTCAACACTAGAGACCAACAAGACAGGATCTTGGTAAGCAA  Raphanus sativus var. oleiformis
EY926356       --> ..................................................  Raphanus sativus var. oleiformis
FD935355       --> GAGAGTGTGTTCAACACTAGAGACCAACAAGACAGGATCTTGGTAAGCAA  Raphanus sativus var. oleiformis
FD977629       --> GAGAGTGTGTTCAACACTAGAGACCAACAAGACAGGATCTTGGTAAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753662       --> GAGAGTGTGTTCAACACTAGACACCAACAAGACTGGATCCTGGTAAGCAA  Raphanus raphanistrum subsp. maritimus
FD983941       --> GAGAGTGTGTTCAACACTAGACACCAACAAGACAGGATCCTGGTAAGCAA  Raphanus raphanistrum subsp. landra

               501    -    551
UN20088        --> GGGCATCAAGATCCTTGAAACCAAGTCTCTGCAGGTAGAACAGCGCAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565923       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV537193       <-- GAGCATCGAGATCCTTGAAACCAAGTCTCTGCAAGTAGAACAGCGCAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896667       <-- GGGCATCAAGATCCTTGAAACCAAGTCTCTGCAGGTAGAACAGCGCAGGC  Raphanus sativus cv Early Scarlet Globe
EX764859       <-- GGGCATCAAGATCCTTGAAACCAAGTCTCTGCAGGTAGAACAGCGCAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717777       <-- GAGCATCAAGATCCTTGAAACCAAGTCTCTACAAGTAGAACAGCGCAGGC  Raphanus sativus var. oleiformis
FD981966       <-- GAGCATCAAGATCCTTGAAACCAAGTCTCTGCAAGTAGAACAGCGCAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX750120       <-- GGGCATCAAGATCCTTGAAACCAAGTCTCTGCAGGTAGAACAGCGCAGGC  Raphanus raphanistrum subsp. maritimus
FD534432       <-- ......................................AACAGCGCAGGC  Raphanus raphanistrum subsp. maritimus
FD939173       <-- ..................................................  Raphanus sativus var. oleiformis
EX906251       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX768697       --> GGGCATCAAGATCCTTGAAACCAAGTCTCTGCAGGTAGAACAGCGCAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720547       --> GAGCATCAAGATCCTTGAAACCAAGTCTCTACAAGTAGAACAGCGCAGGC  Raphanus sativus var. oleiformis
EY926356       --> ..................................................  Raphanus sativus var. oleiformis
FD935355       --> GAGCATCAAGATCCTTGAAACCAAGCCTCTGCAAGTAGAACAGCGCAGGC  Raphanus sativus var. oleiformis
FD977629       --> GAGCATCAAGATCCTTGAAACCAAGTCTCTGCAAGTAGAACAGCGCAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753662       --> GGGCATCAAGATCCTTGAAACCAAGTCTCTGCAGGTAGAACAGCGCAGGC  Raphanus raphanistrum subsp. maritimus
FD983941       --> GGGCATCAAGATCCTTGAAACCAAGTCTCTGCAGGTAGAACAGCGCAGGC  Raphanus raphanistrum subsp. landra

               551    -    601
UN20088        --> TTGAGCTGGTCTTCCACGCTGCTGATCAGTAGCCTCGGGCATTTCTTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565923       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV537193       <-- TTGAGCTGGTCTTCCACGCTGCTGATCAGCAGCCTCGGGCATTTCTTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896667       <-- TTGAGCTGGTCTTCCACGCTGCTGGTCAGTAGCCTCGGGCATTTCTTGAC  Raphanus sativus cv Early Scarlet Globe
EX764859       <-- TTGAGCTGGTCCTCCACGCTGCTGATCAGTAGCCTCGGGCATTTCTTGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717777       <-- TTGAGCTGGTCTTCCACGCTGCTGATCAGTAGCCTCGGGCATTTCTTGAC  Raphanus sativus var. oleiformis
FD981966       <-- TTGAGCTGGTCTTCCACGCTGCTGATCAGTAGCCTCGGGCATTTCTTGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX750120       <-- TTGAGCTGGTCCTCCACGCTGCTGATCAGTAGCCTCGGGCATTTCTTGAC  Raphanus raphanistrum subsp. maritimus
FD534432       <-- TTGAGCTGGTCCTCCACGCTGCTGATCAGTAGCCTCGGGCATTTCTTGAC  Raphanus raphanistrum subsp. maritimus
FD939173       <-- ..................................................  Raphanus sativus var. oleiformis
EX906251       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX768697       --> TTGAGCTGGTCCTCCACGCTGCTGATCAGTAGCCTCGGGCATTTCTTGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720547       --> TTGAGCTGGTCTTCCACGCTGCTGATCAGTAGCCTCGGGCATTTCTTGAC  Raphanus sativus var. oleiformis
EY926356       --> ..................................................  Raphanus sativus var. oleiformis
FD935355       --> TTGAGCTGGTCTTCCACGCTGCTGATCAGTAGCCTCGGGCATTTCTTGAC  Raphanus sativus var. oleiformis
FD977629       --> TTGAGCTGGTCTTCCACGCTGCTGATCAGTAGCCTCGGGCATTTCTTGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753662       --> TTGAGCTGGTCCTCCACGCTGCTGATCAGTAGCCTCGGGCATTTCTTGAC  Raphanus raphanistrum subsp. maritimus
FD983941       --> TTGAGCTGGTCCTCCACGCTGCTGATCAGTAGCCTCGGGCATTTCTTGAC  Raphanus raphanistrum subsp. landra

               601    -    651
UN20088        --> CACTCTTCTGAACGCATTATCGGGGACGCGGAGATCGCTCGACAGGAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565923       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV537193       <-- CACTCTTCTGAACGCATTGTCGGGGACTCGGAGATCGCTCGACAGGAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896667       <-- CACTCTTCTGAACGCATTATCGGGGACGCGGAGATCGCTAGACAGGAACA  Raphanus sativus cv Early Scarlet Globe
EX764859       <-- CACTCTTCTGAACGCATTATCGGGGACGCGGAGATCACTCGACAGGAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717777       <-- CACTCTTCGGAACGCATTATCGGGGACGCGGAGATCGCTCGACAGGAACA  Raphanus sativus var. oleiformis
FD981966       <-- CACTCTTCGGAACGCATTATCGGGGACGCGGAGATCGCTCGACAGGAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX750120       <-- CACTCTTCTGAACGCATTATCGGGGACGCGGAGATCACTCGACAGGAACA  Raphanus raphanistrum subsp. maritimus
FD534432       <-- CACTCTTCTGAACGCATTATCGGGGACGCGGAGATCACTCGACAGGAACA  Raphanus raphanistrum subsp. maritimus
FD939173       <-- ..................................................  Raphanus sativus var. oleiformis
EX906251       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX768697       --> CACTCTTCTGAACGCATTATCGGGGACGCGGAGATCACTCGACAGGAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720547       --> CACTCTTCGGAACGCATTATCGGGGACGCGGAGATCGCTCGACAGGAACA  Raphanus sativus var. oleiformis
EY926356       --> ..................................................  Raphanus sativus var. oleiformis
FD935355       --> CACTCTTCTGAACGCACTATCGGGGACGCGGAGATCGCTCGACAGGAACA  Raphanus sativus var. oleiformis
FD977629       --> CACTCTTCGGAACGCATTATCGGGGACGCGGAGATCGCTCGACAGGAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753662       --> CACTCTTCTGAACGCATTATCGGGGACGCGGAGATCACTCGACAGGAACA  Raphanus raphanistrum subsp. maritimus
FD983941       --> CACTCTTCTGAACGCATTATCGGGGACGCGGAGATCACTCGACAGGAACA  Raphanus raphanistrum subsp. landra

               651    -    701
UN20088        --> CGAAAACAGGGTTGAGTTCTGTTCTGACGTCGGAAGTGAGGATCTTAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565923       <-- ..................................................
EV537193       <-- CGAAAACGGGATTGAGTTCTGTTCTGACGTCGGAAGTGAGGATCTTAGGA
EX896667       <-- CGAAAACAGGGTTGAGTTCTGCTCTGACGTCGGAAGTGAGGATCTTAGGA
EX764859       <-- CGAAAACAGGGTTGAGTTCTGTTCTGACGTCGGAAGTGAGGATCTTAGGA
EW717777       <-- CGAAAACAGGGTTGAGTTCTGTTCTGACGTCGGAAGTGAGGATCTTAGGA
FD981966       <-- CGAAAACAGGGTTGAGTTCTGTTCTGACGTCGGAAGTGAGGATCTTAGGA
EX750120       <-- CGAAAACAGGGTTGAGTTCTGTTCTGACGTCGGAAGTGAGGATCTTAGGA
FD534432       <-- CGAAAACAGGGTTGAGTTCTGTTCTGACGTCGGAAGTGAGGATCTTAGGA
FD939173       <-- ...............................................GGA
EX906251       <-- ..................................................
EX768697       --> CGAAAACAGGGTTGAGTTCTGTTCTGACGTCGGAAGTGAGGATCTTAGGA
EW720547       --> CGAAAACAGGGTTGAGTTCTGTTCTGACGTCGGAAGTGAGGATCTTAGGA
EY926356       --> ..................................................
FD935355       --> CGAAAACAGGGTTGAGTTCTGTTCTGACGTCGGAAGTGAGGATC......
FD977629       --> CGAAAACAGGGTTG....................................
EX753662       --> CGAAAACAGGGTTGAGTTCTGTTCTGACGTCGGAAGTGAGGATCTTAGGA
FD983941       --> CGAAAACAGGGTTGAGTTCTGTTCTGACGTCGGAAGTGAGGATCTTAGGA

               701    -    751
UN20088        --> CACATCCCCAAGATCCTCGGGAGGTCGTTCGGGTAGATTCCTTTTGACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565923       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV537193       <-- CACATCCCCAAGATCCTCGGGAGGTCGTTCGGGTAGAT--TTTTTGACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896667       <-- CACATCCCCAAGATCCTCGGGAGGTCGTTTGGGTAGATTCCTTTTGACTG  Raphanus sativus cv Early Scarlet Globe
EX764859       <-- CACATCCCCAAGATCCTCGGGAGGTCGTTCGGGTAGATTCCTTTTGACTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717777       <-- CACATCCCCAAGATCCTCGGGAGGTCGTTTGGGTATATTCCTTTTGACTG  Raphanus sativus var. oleiformis
FD981966       <-- CACATCCCCAAGATCCTCGGGAGGTCGTTTGGGTATATTCCTTTTGACTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX750120       <-- CACATCCCCAAGATCCTCGGGAGGTCGTTCGGGTAGATTCCTTTTGACTG  Raphanus raphanistrum subsp. maritimus
FD534432       <-- CACATCCCCAAGATCCTCGGGAGGTCGTTCGGGTAGATTCCTTTTGACTG  Raphanus raphanistrum subsp. maritimus
FD939173       <-- CACATCCCCAAGATCCTCGGGAGGTCGTTTGGGTATATTCCTTTTGACTG  Raphanus sativus var. oleiformis
EX906251       <-- .................................................G  Raphanus sativus cv Rat-Tail Radish #3870
EX768697       --> CACATCCCCAAGATCCTCGGGAGGTCGTTCGGGTAGATTCCTTTTGACTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720547       --> CACATCCCCAAGATCCTCGGGAGGTCGTTTGGGTATATTCCTTTTGACTG  Raphanus sativus var. oleiformis
EY926356       --> ..................................................  Raphanus sativus var. oleiformis
FD935355       --> ..................................................  Raphanus sativus var. oleiformis
FD977629       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753662       --> CACATCCCC.........................................  Raphanus raphanistrum subsp. maritimus
FD983941       --> CACATCCCCAAGATCCTCGGGAGGTCGTTCGGGTAGATTCCTTTTGACTG  Raphanus raphanistrum subsp. landra

               751    -    801
UN20088        --> GAGGAAGTTGAGGACGGACTCGACGGAGTCGAGAGAGGCCGAGCGGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565923       <-- ..................................................
EV537193       <-- GAGGAAGTTGAGGACGGACTCGACGGAGTCGAGAGAGGCCGAGCGGAGGA
EX896667       <-- GAGGAAGTTGAGGACTGACTCGACGGAGTCGAGAGAGGCCGAGCGGAGGA
EX764859       <-- GAGGAAGTTGAGGACGGACTCGACGGAGTCGAGAGAGGCCGAGCGGAGGA
EW717777       <-- GAGGAAGTTGAGGACGGACTCGACGGAGTCGAGAGAGGCCGAGCGGAGGA
FD981966       <-- GAGGAAGTTGAGGACGGACTCGACGGAGTCGAGAGAGGCCGAGCGGAGGA
EX750120       <-- GAGGAAGTTGAGGACGGACTCGACGGAGTCGAGAGAGGCCGAGCGGAGGA
FD534432       <-- GAGGAAGTTGAGGACGGACTCGACGGAGTCGAGAGAGGCCGAGCGGAGGA
FD939173       <-- GAGGAAGTTGAGGACGGACTCGACGGAGTCGAGAGAGGCCGAGCGGAGGA
EX906251       <-- GAGGAAGTTGAGGACGGACTCGACGGAGTCGAGAGAGGCCGAGCGGAGGA
EX768697       --> GAGGAAGTTGAGGACGGACTCGACGGAGTCGAGAGAGGCCGAGCGGAGGA
EW720547       --> GAGGAAGTTGAGGACGGACTCGACGGAGTCGAGAGAGGC-GAGCGGAGGA
EY926356       --> ..................................................
FD935355       --> ..................................................
FD977629       --> ..................................................
EX753662       --> ..................................................
FD983941       --> GAGGAAGTTGAGGACGGACTCGACGGAGTCGAGAGAGGCCGAGCGGAGGA

               801    -    851
UN20088        --> AAGGGTTGAGAGAGAGGGCTTTGCCGGAGTCGATTCCCATGAGCTCGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565923       <-- ..................................................
EV537193       <-- TAGGGTTGAGAGAGAGGGCTTTGCCGGAGTCGATTCCCATGAGCTC-AGG
EX896667       <-- AAGGGTTGAGAGAGAGGGCTTTGCCGGAGTCGATTCCCATGAGCTCGAGG
EX764859       <-- AAGGGTTGAGAGAGAGGGCTTTGCCGGAGTCGATTCCCATGAGCTCGAGG
EW717777       <-- AAGGGTTGAGAGAGAGAGCTTTGCCGGAGTCGATTCCCATGAGCTCGAGG
FD981966       <-- AAGGGTTGAGAGAGAGGGCTTTGCCGGAGTCGATTCCCATGAGCTCGAGG
EX750120       <-- AAGGGTTGAGAGAGAGGGCTTTGCCGGAGTCGATTCCCATGAGCTCGAGG
FD534432       <-- AAGGGTTGAGAGAGAGGGCTTTGCCGGAGTCGATTCCCATGAGCTCGAGG
FD939173       <-- AAGGGTTGAGAGAGAGGGCTTTGCCGGAGTCGATTCCCATGAGCTCGAGG
EX906251       <-- AAGGGTTGAGAGAGAGGGCTTTGCCGGAGTCGATTCCCATGAGCTCGAGG
EX768697       --> AAGGGTTGAGAGAGAGGGCTTT............................
EW720547       --> AAGGGT-GAGAGAGAGAGCTTTG...........................
EY926356       --> ..................................................
FD935355       --> ..................................................
FD977629       --> ..................................................
EX753662       --> ..................................................
FD983941       --> AAGGGTTGAGAGAGAGGGCT..............................

               851    -    901
UN20088        --> CATAGGATCTTCTCTTTCATCTGGAGGGTTACGCCTTGGTCGGCTACGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565923       <-- ..................................................
EV537193       <-- CATAGGATCTTCTCTTTCATCTGGAGGGTTACGCCTTGGTCGGCTACGGA
EX896667       <-- CATAGGATCTTCTCTTTCATCTGGAGGGTTACGCCTTGGTCGGCTACGGA
EX764859       <-- CATAGGATCTTCTCTTTCATTTGGAGGGTTACGGCTTGGTCGGCTACGGA
EW717777       <-- CATAGGACCTTCTCTTTCATCTGGAGGGTTACGCCTTGGTCGGTTACGGA
FD981966       <-- CATAGGATCTTCTCTTTCATCTGAAGGGTTACGCCTTGGTCGGCTACGGA
EX750120       <-- CATAGGATCTTCTCTTTCATTTGGAGGGTTACGGCTTGGTCGGCTACGGA
FD534432       <-- CATAGGATCTTCTCTTTCATTTGGAGGGTTACGGCTTGGTCGGCTACGGA
FD939173       <-- CATAGGATCTTCTCTTTCATCTGGAGGGTTACGCCTTGGTCGGCTACGGA
EX906251       <-- CATAGGATCTTCTCTTTCATCTGGAGGGTTACGCCTTGGTCGGCTACGGA
EX768697       --> ..................................................
EW720547       --> ..................................................
EY926356       --> ..................................................
FD935355       --> ..................................................
FD977629       --> ..................................................
EX753662       --> ..................................................
FD983941       --> ..................................................

               901    -    951
UN20088        --> GAAGAGAGGGTGGCTGTGGAGAGTGGTTTTGATGGTTGTGGGTTTCGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565923       <-- ..................................................
EV537193       <-- GAAGAGAGGGTGGCTGTGGAGAGTGGTTTTGATGGTTGTGGGTTTCGTGG
EX896667       <-- GAAGAGTGGGTGGCTGTGGAGAGTGGTTTTGATGGTTGTGGGTTTCGTGG
EX764859       <-- GAAGAGAGGGTGGCTGTGGAGAGTGGTTTTGATGGTTGTGGGTTTCGTGG
EW717777       <-- GAAGAGTGGGTGGCTGTGGAGAGTGGTTTTGATGGTTGTGGGTTTCGTGG
FD981966       <-- GAAGAGAGGGTGGCTGTGGAGAGTGGTTTTGATGGTTGTGGGTTTCGTGG
EX750120       <-- GAAGAGAGGGTGGCTGTGGAGAGTGGTTTTGATGGTTGTGGGCTTCGTGG
FD534432       <-- GAAGAGAGGGTGGCTGTGGAGAGTGGTTTTGATGGTTGTGGGTTTCGTGG
FD939173       <-- GAAGAGAGGGTGGCTGTGGAGAGTGGTGTTGATGGTTGTGGGTTTCGTGG
EX906251       <-- GAAGAGAGGGTGGCTGTGGAGAGTGGTTTTGATGGTTGTGGGTTTCGTGG
EX768697       --> ..................................................
EW720547       --> ..................................................
EY926356       --> ..................................................
FD935355       --> ..................................................
FD977629       --> ..................................................
EX753662       --> ..................................................
FD983941       --> ..................................................

               951    -   1001
UN20088        --> ATAGAGATTGCTGTGGTGGACATGATGAAGGTTTCTTTGGGGAGATGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565923       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV537193       <-- ATAGAGATTGCTGTGGTGGACATGATGAAGGTTTCTTTGGGGAGATGTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX896667       <-- ATAGAGATTGCTGTGGTGGACATGATGAAGGTTTCTTTGGGGAGATGTAG  Raphanus sativus cv Early Scarlet Globe
EX764859       <-- ATAGAGATTGGTGTGGTGGACATGGTGAAGGTTTCTTTGGGGAGATGTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717777       <-- ATAGAGATTGCTGTGGTGGACATGATGAAGGTTTCTTTGGGGAGATGTAG  Raphanus sativus var. oleiformis
FD981966       <-- ATAGAGATTGCTGTGGCGGACATGGTGAAGGTTTCTTTGGGGAGATGTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX750120       <-- ATAGAGATTGGTGTGGTGGACATGGTGAAGGTTTCTTTGGGGAGATGTAG  Raphanus raphanistrum subsp. maritimus
FD534432       <-- ATAGAGATTGGTGTGGTGGACATGGTGAAGGTTTCTTTGGGGAGATGTAG  Raphanus raphanistrum subsp. maritimus
FD939173       <-- ATAGAGATTGCTGTGGTGGACATGATGAAGGTTTCTTTGGGGAGATGTAG  Raphanus sativus var. oleiformis
EX906251       <-- ATAGAGATTGCTGTGGTGGACATGATGAAGGTTTCTTTGGGGAGATGTAG  Raphanus sativus cv Rat-Tail Radish #3870
EX768697       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720547       --> ..................................................  Raphanus sativus var. oleiformis
EY926356       --> ..................................................  Raphanus sativus var. oleiformis
FD935355       --> ..................................................  Raphanus sativus var. oleiformis
FD977629       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753662       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD983941       --> ..................................................  Raphanus raphanistrum subsp. landra

               1001   -   1051
UN20088        --> AGAGACGAGCTCAGTGCTGCAGACATGGTGGAAGTGAGTTGAGAAAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565923       <-- ..................................................
EV537193       <-- AGAGACGAGCTCAGTGCTGCAGACATGGTGGAAGTGAGTTccc.......
EX896667       <-- AGAGACGAGCTCAGTGCTGCAGACATGGTGGAAGTGAGTcc.........
EX764859       <-- AGAGACGAGCTCAGTGCTGCAGACATGGTGGAAGTGAGTTGAGAAAGAGA
EW717777       <-- AGAGACGAGCTCAGCGCCGCAGACATGGTGGAAGTGAGTgtcc.......
FD981966       <-- AGAGACGAGCTCAGTGCTGCAGACATGGTGGAAGTGAGTcc.........
EX750120       <-- AGAGACGAGCTCAGTGCTGCAGACATGGTGGAAGTGAGTTccc.......
FD534432       <-- AGAGACGAGCTCAGTGCTGCAGACATGGTGGAAGTcc.............
FD939173       <-- AGAGACGAGCTCAGTGCTGCAGACATGGTGGAAGTGAGTcc.........
EX906251       <-- AGAGACGAGCTCAGTACTGCAGACATGGTGGAAGTcc.............
EX768697       --> ..................................................
EW720547       --> ..................................................
EY926356       --> ..................................................
FD935355       --> ..................................................
FD977629       --> ..................................................
EX753662       --> ..................................................
FD983941       --> ..................................................

               1051   -   1101
UN20088        --> GAAAGAGAGAGATATGATGTGGCCTTAAGGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565923       <-- .................................
EV537193       <-- .................................
EX896667       <-- .................................
EX764859       <-- GAAAGAGAGAGATATGATGTGGCCTTAAGGTCC
EW717777       <-- .................................
FD981966       <-- .................................
EX750120       <-- .................................
FD534432       <-- .................................
FD939173       <-- .................................
EX906251       <-- .................................
EX768697       --> .................................
EW720547       --> .................................
EY926356       --> .................................
FD935355       --> .................................
FD977629       --> .................................
EX753662       --> .................................
FD983941       --> .................................