RadishBase

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Alignment for radish unigene UN20089

               1      -     51
UN20089        --> GGGAGTCTTAGAAAGCGCTCTTATAGTTTTCTCATCAAGCGCCTCCGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529851       <-- GGGAGTCTTAGAAAGCGCTCTTATAGTTTTCTCATCAAGCGCCTCCGTTT
EX892722       <-- ................................ggatcAGCGC-TCCGTTT
FD934884       <-- .......................................gggCTCCGTTT
EX766810       <-- ................................................gg
FD546760       <-- ..................................................
EY935762       <-- ..................................................
EV543648       <-- ..................................................
FD945554       <-- ..................................................
FD581083       <-- ..................................................
FD529325       <-- ..................................................
FD960713       <-- ..................................................
EY894107       <-- ..................................................
EX775637       <-- ..................................................
EV524998       --> GGGAGTCTTAGAAAGCGCTCTTATAGTTTTCTCATCAAGCGCCTCCGTTT
EY897915       --> ..................................ggAAGCGCCTCCGTTT
EY900297       --> ..................................ggAAGCGCCTCCGTTT
EX888861       --> ................................ggatcAGCGCCTCCGTTT
EY939912       --> ................................ggatcatCGCCTCCGTTT
EW733912       --> ......................................ggGCCTCCGTTT
FD938533       --> ......................................ggGCCTCCGTTT
EV547854       --> ................................................gg
EX762585       --> ................................................gg
FD533017       --> ...............................................ggg
FD550852       --> ................................................gg
FD964808       --> ................................................gg
FD949978       --> .................................................g
FD576627       --> ..................................................
EX771585       --> ..................................................
EY899095       --> ..................................................
FY445281       --> ..................................................

               51     -    101
UN20089        --> AGCTCTTAGCTCTTCTGTCTCCTCTTCGGCTGATCTCTCCGTTGAAAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529851       <-- AGCTCTTAGCTCTTCTGTCTCCTCTTCGGCTAATCTCTCCGTTGAAAATG
EX892722       <-- AGCTCTTAGCT-TT-TGTCTCCTCTTCGGCTGATCTCTCCGTTGAAAATG
FD934884       <-- TGCTCTTAGCTCTTCTGTCTCCTCTTCGGCTGATCTCTCCGTTGAAAATG
EX766810       <-- AGCTCTTAGCTCTTCTGTCTCCTCTTCGGCTGATCTCTCCGTTGAAAATG
FD546760       <-- ....CTTAGCTCTTCTGTCTCCTCTTCGGCTGATCTCTCCGTTGAAAATG
EY935762       <-- ................GTCTCCTCTTCGGCTGATCTCTCCGTTGAAAATG
EV543648       <-- .............................CTGATCTCTCCGTTGAAAATG
FD945554       <-- .................................TCTCTCCGTTGAAAATG
FD581083       <-- ..................................CTCTCCGTTGAAAATG
FD529325       <-- ..................................................
FD960713       <-- ..................................................
EY894107       <-- ..................................................
EX775637       <-- ..................................................
EV524998       --> AGCTCTTAGCTCTTCTGTCTCCTCTTCGGCTAATCTCTCCGTTGAAAATG
EY897915       --> AGCTCTTAGCTCTTCTGTCTCCTCTTCGGCTGATCTCTCCGTTGAAAATG
EY900297       --> AGCTCTTAGCTCTTCTGTCTCCTCTTCGGCTAATCTCTCCGTTGAAAATG
EX888861       --> AGCTCTTAGCT-TT-TGTCTCCTCTTCGGCTGATCTCTCCGTTGAAAATG
EY939912       --> AGCTCTTAGCT-TT-TGTCTCCTCTTCGGCTGATCTCTCCGTTGAAAATG
EW733912       --> AGCTCTTAGCTCTTCTGTCTCCTCTTCGGCTGATCTCTCCGTTGAAAATG
FD938533       --> TGCTCTTAGCTCTTCTGTCTCCTCTTCGGCTGATCTCTCCGTTGAAAATG
EV547854       --> AGCTCTTAGCTCTTCTGTCTCCTCTTCGGCTGATCTCTCCGTTGAAAATG
EX762585       --> AGCTCTTAGCTCTTCTGTCTCCTCTTCGGCTGATCTCTCCGTTGAAAATG
FD533017       --> AGCTCTTAGCTCTTCTGTCTCCTCTTCGGCTAATCTCTCCGTTGAAAATG
FD550852       --> AGCTCTTAGCTCTTCTGTCTCCTCTTCGGCTGATCTCTCCGTTGAAAATG
FD964808       --> AGCTCTTAGCTCTTCTGTCTCCTCTTCGGCTAATCTCTCCGTTGAAAATG
FD949978       --> gGCTCTTAGCTCTTCTGTCTCCTCTTCGGCTAATCTCTCCGTTGAAAATG
FD576627       --> .....ggAGCTCTTCTGTCTCCTCTTCGGCTGATCTCTCCGTTGAAAATG
EX771585       --> ..................CTCCTCTTCGGCTAATCTCTCCGTTGAAAATG
EY899095       --> ......................................ggGTTGAAAATG
FY445281       --> ................................................TG

               101    -    151
UN20089        --> GTTGCTTTCCGGTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529851       <-- GTTGCTTTCCGTTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
EX892722       <-- GTTGCTTTCCGTTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
FD934884       <-- GTTGCTTTCCGGTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
EX766810       <-- GTTGCTTTCCGGTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
FD546760       <-- GTTGCTTTCCGGTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
EY935762       <-- GTTGCTTTCCGTTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
EV543648       <-- GTTGCTTTCCGGTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
FD945554       <-- GTTGCTTTCCGGTTCCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
FD581083       <-- GTTGCTTTCCGGTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
FD529325       <-- ....................................AGAGCACTTCCAAC
FD960713       <-- ..................................................
EY894107       <-- ..................................................
EX775637       <-- ..................................................
EV524998       --> GTTGCTTTCCGTTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
EY897915       --> GTTGCTTTCCGGTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
EY900297       --> TTTGCTTTCCTTTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
EX888861       --> GTTGCTTTCCGTTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
EY939912       --> GTTGCTTTCCGTTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
EW733912       --> GTTGCTTTCCGGTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
FD938533       --> GTTGCTTTCCGGTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
EV547854       --> GTTGCTTTCCGGTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
EX762585       --> GTTGCTTTCCGGTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
FD533017       --> GTTGCTTTCCGTTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
FD550852       --> GTTGCTTTCCGGTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
FD964808       --> GTTGCTTTCCGTTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
FD949978       --> GTTGCTTTCCGGTTCCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
FD576627       --> GTTGCTTTCCGGTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
EX771585       --> GTTGCTTTCCGTTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
EY899095       --> GTTGCTTTCCGTTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC
FY445281       --> GTTGCTTTCCGGTTTCACCAATACCAAGTGGTTGGGAGAGCACTTCCAAC

               151    -    201
UN20089        --> AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTATGGGCCACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529851       <-- AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTATGGGCCACCA  Raphanus raphanistrum subsp. maritimus
EX892722       <-- AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTATGGGCCACTA  Raphanus sativus var. oleiformis
FD934884       <-- AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTTTGGGCCACCA  Raphanus sativus var. oleiformis
EX766810       <-- AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTTTGGGCCACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546760       <-- AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTTTGGGCCACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935762       <-- AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTATGGGCCACTA  Raphanus sativus cv Early Scarlet Globe
EV543648       <-- AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTTTGGGCCACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945554       <-- AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTATGGGCCACTA  Raphanus sativus cv Early Scarlet Globe
FD581083       <-- AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTTTGGGCCACCA  Raphanus sativus cv Rat-Tail Radish #3870
FD529325       <-- AGAGAAAGATGTGCAGCCTAAGATTTACAGGACGAAGCTATGGGCCACCA  Raphanus raphanistrum subsp. maritimus
FD960713       <-- .............................GGATGAAGCTATGGGCCACCA  Raphanus raphanistrum subsp. maritimus
EY894107       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX775637       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV524998       --> AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTATGGGCCACCA  Raphanus raphanistrum subsp. maritimus
EY897915       --> AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTATGGGCCACCA  Raphanus raphanistrum subsp. maritimus
EY900297       --> AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTATGGGCCACCA  Raphanus raphanistrum subsp. maritimus
EX888861       --> AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTATGGGCCACTA  Raphanus sativus var. oleiformis
EY939912       --> AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTATGGGCCACTA  Raphanus sativus cv Early Scarlet Globe
EW733912       --> AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTTTGGGCCACCA  Raphanus sativus cv Rat-Tail Radish #3870
FD938533       --> AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTTTGGGCCACCA  Raphanus sativus var. oleiformis
EV547854       --> AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTTTGGGCCACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762585       --> AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTTTGGGCCACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533017       --> AGAGAAAGATGTGCAGCCTAAGATTTACAGGACGAAGCTATGGGCCACCA  Raphanus raphanistrum subsp. maritimus
FD550852       --> AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTTTGGGCCACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964808       --> AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTATGGGCCACCA  Raphanus raphanistrum subsp. maritimus
FD949978       --> AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTATGGGCCACTA  Raphanus sativus cv Early Scarlet Globe
FD576627       --> AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTTTGGGCCACCA  Raphanus sativus cv Rat-Tail Radish #3870
EX771585       --> AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTATGGGCCACCA  Raphanus raphanistrum subsp. landra
EY899095       --> AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTATGGGCCACCA  Raphanus raphanistrum subsp. maritimus
FY445281       --> AGAGAAAGATGTGCAGCCTAAGATTTACAGGATGAAGCTATGGGCCACTA  Raphanus sativus cv GSK3-1

               201    -    251
UN20089        --> ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529851       <-- ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
EX892722       <-- ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
FD934884       <-- ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
EX766810       <-- ATGAAGTCCGCGCCAAATCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
FD546760       <-- ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
EY935762       <-- ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
EV543648       <-- ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
FD945554       <-- ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
FD581083       <-- ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
FD529325       <-- ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
FD960713       <-- ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
EY894107       <-- ..................................................
EX775637       <-- ..................................................
EV524998       --> ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
EY897915       --> ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
EY900297       --> ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
EX888861       --> ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
EY939912       --> ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
EW733912       --> ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
FD938533       --> ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
EV547854       --> ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
EX762585       --> ATGAAGTCCGCGCCAAATCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
FD533017       --> ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
FD550852       --> ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
FD964808       --> ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
FD949978       --> ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
FD576627       --> ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
EX771585       --> ATGAAGTTCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
EY899095       --> ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG
FY445281       --> ATGAAGTCCGCGCCAAGTCCAAGTTTTGGTACTTCTTGAGGAAGCTGAAG

               251    -    301
UN20089        --> AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529851       <-- AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
EX892722       <-- AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
FD934884       <-- AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
EX766810       <-- AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
FD546760       <-- AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
EY935762       <-- AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
EV543648       <-- AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
FD945554       <-- AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
FD581083       <-- AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
FD529325       <-- AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
FD960713       <-- AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
EY894107       <-- ..................................................
EX775637       <-- ..................................................
EV524998       --> AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
EY897915       --> AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
EY900297       --> AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
EX888861       --> AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
EY939912       --> AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
EW733912       --> AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
FD938533       --> AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
EV547854       --> AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
EX762585       --> AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
FD533017       --> AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
FD550852       --> AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
FD964808       --> AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
FD949978       --> AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
FD576627       --> AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
EX771585       --> AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
EY899095       --> AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA
FY445281       --> AAGGTTAAGAAAAGCAACGGACAAATGCTTGCCATCAATGAGATTTTCGA

               301    -    351
UN20089        --> GAAGAACCCCACGAAGATCAAGAACTACGGTATCTGGCTCCGTTACCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529851       <-- GAAGAACCCCACGAAGATCAAGAACTACGGTATCTGGCTCCGTTACCAGA  Raphanus raphanistrum subsp. maritimus
EX892722       <-- GAAGAACCCCACGAAGATCAAGAACTACGGTATCTGGCTCCGTTACCAGA  Raphanus sativus var. oleiformis
FD934884       <-- GAAGAACCCCGCGAAGATCAAGAACTACGGTATCTGGCTCCGTTACCAGA  Raphanus sativus var. oleiformis
EX766810       <-- GAAGAACCCCACGAAGATTAAGAACTACGGCATCTGGCTCCGTTACCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546760       <-- GAAGAACCCCACGAAGATTAAGAACTACGGCATCTGGCTCCGTTACCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935762       <-- GAAGAACCCCACGAAGATCAAGAACTACGGTATCTGGCACCGTTACCAGA  Raphanus sativus cv Early Scarlet Globe
EV543648       <-- GAAGAACCCCACGAAGATTAAGAACTACGGCATCTGGCTCCGTTACCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945554       <-- GAAGAACCCCACGAAGATCAAGAACTACGGTATCTGGCACCGTTACCAGA  Raphanus sativus cv Early Scarlet Globe
FD581083       <-- GAAGAACCCCACGAAGATCAAGAACTACGGTATCTGGCTCCGTTACCAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD529325       <-- GAAGAACCCCACGAAGATCAAGAACTACGGTATCTGGCTCCGTTACCAGA  Raphanus raphanistrum subsp. maritimus
FD960713       <-- GAAGAACCCCACGAAGATCAAGAACTACGGTATCTGGCTCCGTTACCAGA  Raphanus raphanistrum subsp. maritimus
EY894107       <-- ................................TCTGGCTCCGTTACCAGA  Raphanus raphanistrum subsp. maritimus
EX775637       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV524998       --> GAAGAACCCCACGAAGATCAAGAACTACGGTATCTGGCTCCGTTACCAGA  Raphanus raphanistrum subsp. maritimus
EY897915       --> GAAGAACCCCACGAAGATCAAGAACTACGGTATCTGGCTCCGTTACCAGA  Raphanus raphanistrum subsp. maritimus
EY900297       --> GAAGAACCCCACGAAGATCAAGAACTACGGTATCTGGCTCCGTTACCAGA  Raphanus raphanistrum subsp. maritimus
EX888861       --> GAAGAACCCCACGAAGATCAAGAACTACGGTATCTGGCTCCGTTACCAGA  Raphanus sativus var. oleiformis
EY939912       --> GAAGAACCCCACGAAGATCAAGAACTACGGTATCTGGCACCGTTACCAGA  Raphanus sativus cv Early Scarlet Globe
EW733912       --> GAAGAACCCCACGAAGATTAAGAACTACGGCATCTGGCTCCGTTACCAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD938533       --> GAAGAACCCCGCGAAGATCAAGAACTACGGTATCTGGCTCCGTTACCAGA  Raphanus sativus var. oleiformis
EV547854       --> GAAGAACCCCACGAAGATTAAGAACTACGGCATCTGGCTCCGTTACCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762585       --> GAAGAACCCCACGAAGATTAAGAACTACGGCATCTGGCTCCGTTACCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533017       --> GAAGAACCCCACGAAGATCAAGAACTACGGTATCTGGCTCCGTTACCAGA  Raphanus raphanistrum subsp. maritimus
FD550852       --> GAAGAACCCCACGAAGATTAAGAACTACGGCATCTGGCTCCGTTACCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964808       --> GAAGAACCCCACGAAGATCAAGAACTACGGTATCTGGCTCCGTTACCAGA  Raphanus raphanistrum subsp. maritimus
FD949978       --> GAAGAACCCCACGAAGATCAAGAACTACGGTATCTGGCACCGTTACCAGA  Raphanus sativus cv Early Scarlet Globe
FD576627       --> GAAGAACCCCACGAAGATCAAGAACTACGGTATCTGGCTCCGTTACCAGA  Raphanus sativus cv Rat-Tail Radish #3870
EX771585       --> GAAGAACCCCACGAAGATCAAGAACTACGGTATCTGGCTCCGTTACCAGA  Raphanus raphanistrum subsp. landra
EY899095       --> GAAGAACCCCACGAAGATCAAGAACTACGGTATCTGGCTCCGTTACCAGA  Raphanus raphanistrum subsp. maritimus
FY445281       --> GAAGAACCCCACGAAGATCAAGAACTACGGTATCTGGCACCGTTACCAGA  Raphanus sativus cv GSK3-1

               351    -    401
UN20089        --> GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529851       <-- GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC
EX892722       <-- GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC
FD934884       <-- GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACTCTC
EX766810       <-- GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC
FD546760       <-- GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC
EY935762       <-- GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC
EV543648       <-- GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC
FD945554       <-- GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC
FD581083       <-- GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACTTTC
FD529325       <-- GCAGAACCGGGTACCACAACACGTACAAGGAGTTCCGTGACACCACGCTC
FD960713       <-- GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC
EY894107       <-- GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC
EX775637       <-- ..................................................
EV524998       --> GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC
EY897915       --> GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC
EY900297       --> GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC
EX888861       --> GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC
EY939912       --> GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC
EW733912       --> GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC
FD938533       --> GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACTCTC
EV547854       --> GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC
EX762585       --> GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC
FD533017       --> GCAGAACCGGGTACCACAACACGTACAAGGAGTTCCGTGACACCACGCTC
FD550852       --> GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC
FD964808       --> GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC
FD949978       --> GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC
FD576627       --> GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACTCTC
EX771585       --> GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC
EY899095       --> GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC
FY445281       --> GCAGAACCGGGTACCACAACATGTACAAGGAGTTCCGTGACACCACGCTC

               401    -    451
UN20089        --> AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529851       <-- AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
EX892722       <-- AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
FD934884       <-- AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
EX766810       <-- AACGGTGCAGTGGAGCAGATGTACGCCGAGATGGCTTCTCGCCATAGAGT
FD546760       <-- AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
EY935762       <-- AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
EV543648       <-- AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
FD945554       <-- AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
FD581083       <-- AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
FD529325       <-- AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
FD960713       <-- AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
EY894107       <-- AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
EX775637       <-- ......................................TCGCCATAGAGT
EV524998       --> AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
EY897915       --> AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
EY900297       --> AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
EX888861       --> AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
EY939912       --> AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
EW733912       --> AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
FD938533       --> AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
EV547854       --> AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
EX762585       --> AACGGTGCAGTGGAGCAGATGTACGCCGAGATGGCTTCTCGCCATAGAGT
FD533017       --> AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
FD550852       --> AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
FD964808       --> AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
FD949978       --> AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
FD576627       --> AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
EX771585       --> AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
EY899095       --> AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT
FY445281       --> AACGGTGCAGTGGAGCAGATGTACACCGAGATGGCTTCTCGCCATAGAGT

               451    -    501
UN20089        --> GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCCGCAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529851       <-- GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCTGCAAAGC  Raphanus raphanistrum subsp. maritimus
EX892722       <-- GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCCGCAAAGC  Raphanus sativus var. oleiformis
FD934884       <-- GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCCGCAAAGC  Raphanus sativus var. oleiformis
EX766810       <-- GAGGTTCCCTTGCATTCAGACCATCAAGACCGCCACAGTCCCCGCAAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546760       <-- GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCCGCAAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935762       <-- GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCCGCAAAGC  Raphanus sativus cv Early Scarlet Globe
EV543648       <-- GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCCGCAAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945554       <-- GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCCGCAAAGC  Raphanus sativus cv Early Scarlet Globe
FD581083       <-- GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCCGCAAAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD529325       <-- GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCTGCAAAGC  Raphanus raphanistrum subsp. maritimus
FD960713       <-- GAGGTTCCCTTGCGTTCAGATCATCAAGACCGCCACAGTCCCTGCAAAGC  Raphanus raphanistrum subsp. maritimus
EY894107       <-- GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCTGCAAAGC  Raphanus raphanistrum subsp. maritimus
EX775637       <-- GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCTGCAAAGC  Raphanus raphanistrum subsp. landra
EV524998       --> GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCTGCAAAGC  Raphanus raphanistrum subsp. maritimus
EY897915       --> GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCTGCAAAGC  Raphanus raphanistrum subsp. maritimus
EY900297       --> GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCTGCAAAGC  Raphanus raphanistrum subsp. maritimus
EX888861       --> GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCCGCAAAGC  Raphanus sativus var. oleiformis
EY939912       --> GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCCGCAAAGC  Raphanus sativus cv Early Scarlet Globe
EW733912       --> GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCCGCAAAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD938533       --> GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCCGCAAAGC  Raphanus sativus var. oleiformis
EV547854       --> GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCCGCAAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762585       --> GAGGTTCCCTTGCATTCAGACCATCAAGACCGCCACAGTCCCCGCAAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533017       --> GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCTGCAAAGC  Raphanus raphanistrum subsp. maritimus
FD550852       --> GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCCGCAAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964808       --> GAGGTTCCCTTGCGTTCAGATCATCAAGACCGCCACAGTCCCTGCAAAGC  Raphanus raphanistrum subsp. maritimus
FD949978       --> GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCCGCAAAGC  Raphanus sativus cv Early Scarlet Globe
FD576627       --> GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCCGCAAAGC  Raphanus sativus cv Rat-Tail Radish #3870
EX771585       --> GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCTGCAAAGC  Raphanus raphanistrum subsp. landra
EY899095       --> GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCTGCAAAGC  Raphanus raphanistrum subsp. maritimus
FY445281       --> GAGGTTCCCTTGCATTCAGATCATCAAGACCGCCACAGTCCCCGCAAAGC  Raphanus sativus cv GSK3-1

               501    -    551
UN20089        --> TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529851       <-- TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
EX892722       <-- TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
FD934884       <-- TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
EX766810       <-- TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
FD546760       <-- TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
EY935762       <-- TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
EV543648       <-- TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
FD945554       <-- TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
FD581083       <-- TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
FD529325       <-- TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
FD960713       <-- TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
EY894107       <-- TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
EX775637       <-- TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
EV524998       --> TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
EY897915       --> TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
EY900297       --> TGTGCAAGAGAGAGAGCACCAAGCAGTTCTACAACTCCAAGATCAAGTTC
EX888861       --> TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
EY939912       --> TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
EW733912       --> TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
FD938533       --> TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
EV547854       --> TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
EX762585       --> TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
FD533017       --> TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
FD550852       --> TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
FD964808       --> TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
FD949978       --> TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
FD576627       --> TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
EX771585       --> TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
EY899095       --> TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC
FY445281       --> TGTGCAAGAGAGAGAGCACCAAGCAGTTCCACAACTCCAAGATCAAGTTC

               551    -    601
UN20089        --> CCTCTTGTTTTCAGGAAGGTCAGGCCACCGACCAGGAAGCTCAAGACTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529851       <-- CCTCTTGTTTTCAGGAAGGTCAGGCCACCGACCAGGAAGCTCAAGACTAC  Raphanus raphanistrum subsp. maritimus
EX892722       <-- CCTCTTGTTTTCAGGAAGGTCAGGCCACCAACCAGGAAGCTCAAGACTAC  Raphanus sativus var. oleiformis
FD934884       <-- CCTCTTGTTTTCAGGAAGGTCAGGCCACCAACCAGGAAGCTCAAGGCTAC  Raphanus sativus var. oleiformis
EX766810       <-- CCTCTTGTTTTCAGGAAGGTCAGGCCACCAACCAGGAAGCTCAAGACTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546760       <-- CCTCTTGTTTTCAGGAAGGTCAGGCCACCAACCAGGAAGCTCAAGACTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935762       <-- CCTCTTGTTTTCAGGAAGGTCAGGCCACCGACCAGGAAGCTCAAGACTAC  Raphanus sativus cv Early Scarlet Globe
EV543648       <-- CCTCTTGTTTTCAGGAAGGTCAGGCCACCAACCAGGAAGCTCAAGACTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945554       <-- CCTCTTGTTTTCAGGAAGGTCAGGCCACCGACCAGGAAGCTCAAGACTAC  Raphanus sativus cv Early Scarlet Globe
FD581083       <-- CCTCTTGTTTTCAGGAAGGTCAGGCCACCAACCAGGAAGCTCAAGACTAC  Raphanus sativus cv Rat-Tail Radish #3870
FD529325       <-- CCTCTTGTTTTCAGGAAGGTCAGGCCACCTACCAGGAAGCTCAAGACTAC  Raphanus raphanistrum subsp. maritimus
FD960713       <-- C-TCTTGTTTTCAGGAAGGTCAGGCCACCGACCAGGAAGCTCAAGACTAC  Raphanus raphanistrum subsp. maritimus
EY894107       <-- CCTTTTGTTTTCAGGAAGGTCAGGCCCCCGACCAGGAAGCTCAAGACTAC  Raphanus raphanistrum subsp. maritimus
EX775637       <-- CCTTTTGTTTTCAGGAAGGTCAGGCCCCCGACCAGGAAGCTCAA......  Raphanus raphanistrum subsp. landra
EV524998       --> CCTCTTGTTTTCAGGAAGGTCAGGCCACCGACCAGGAAGCTCAAGACTAC  Raphanus raphanistrum subsp. maritimus
EY897915       --> CCTCTTGTTTTCAGGAAGGTCAGGCCACCGACCAGGAAGCTCAAGACTAC  Raphanus raphanistrum subsp. maritimus
EY900297       --> CCTCTTGTTTTCAGGAAGGTCAGGCCACCGACCAGGAAGCTCAAGACTAC  Raphanus raphanistrum subsp. maritimus
EX888861       --> CCTCTTGTTTTCAGGAAGGTCAGGCCACCAACCAGGAAGCTCAAGACTAC  Raphanus sativus var. oleiformis
EY939912       --> CCTCTTGTTTTCAGGAAGGTCAGGCCACCGACCAGGAAGCTCAAGACTAC  Raphanus sativus cv Early Scarlet Globe
EW733912       --> CCTCTTGTTTTCAGGAAGGTCAGGCCACCAACCAGGAAGCTCAAGACTAC  Raphanus sativus cv Rat-Tail Radish #3870
FD938533       --> CCTCTTGTTTTCAGGAAGGTCAGGCCACCAACCAGGAAGCTCAAGGCTAC  Raphanus sativus var. oleiformis
EV547854       --> CCTCTTGTTTTCAGGAAGGTCAGGCCACCAACCAGGAAGCTCAAGACTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762585       --> CCTCTTGTTTTCAGGAAGGTCAGGCCACCAACCAGGAAGCTCAAGACTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533017       --> CCTCTTGTTTTCAGGAAGGTCAGGCCACCTACCAGGAAGCTCAAGACTAC  Raphanus raphanistrum subsp. maritimus
FD550852       --> CCTCTTGTTTTCAGGAAGGTCAGGCCACCAACCAGGAAGCTCAAGACTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964808       --> C-TCTTGTTTTCAGGAAGGTCAGGCCACCGACCAGGAAGCTCAAGACTAC  Raphanus raphanistrum subsp. maritimus
FD949978       --> CCTCTTGTTTTCAGGAAGGTCAGGCCACCGACCAGGAAGCTCAAGACTAC  Raphanus sativus cv Early Scarlet Globe
FD576627       --> CCTCTTGTTTTCAGGAAGGTCAGGCCACCAACCAGGAAGCTCAAGACTAC  Raphanus sativus cv Rat-Tail Radish #3870
EX771585       --> CCTCTTGTTTTCAGGAAGGTCAGGCCACCGACCAGGAAGCTCAAGACTAC  Raphanus raphanistrum subsp. landra
EY899095       --> CCTCTTGTTTTCAGGAAGGTCAGGCCACCGACCAGGAAGCTCAAGACTAC  Raphanus raphanistrum subsp. maritimus
FY445281       --> CCTCTTGTTTTCAGGAAGGTCAGGCCACCGACCAGGAAGCTCAAGACTAC  Raphanus sativus cv GSK3-1

               601    -    651
UN20089        --> GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAA-TCCAAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529851       <-- GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAA-TCCAAAAT  Raphanus raphanistrum subsp. maritimus
EX892722       <-- GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAA-TCCAAAAT  Raphanus sativus var. oleiformis
FD934884       <-- GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAAATCCAAAAT  Raphanus sativus var. oleiformis
EX766810       <-- GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAAATCCAAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546760       <-- GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAAATCCAAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935762       <-- GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAA--TCCAAAAT  Raphanus sativus cv Early Scarlet Globe
EV543648       <-- GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAAATCCAAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945554       <-- GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAA--TCCAAAAT  Raphanus sativus cv Early Scarlet Globe
FD581083       <-- GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAA-TCCAAAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD529325       <-- GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAA-TCCAAAAT  Raphanus raphanistrum subsp. maritimus
FD960713       <-- GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAA-TCCAAAAT  Raphanus raphanistrum subsp. maritimus
EY894107       <-- GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAA-TCCAAAAT  Raphanus raphanistrum subsp. maritimus
EX775637       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV524998       --> GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAA-TCCAAAAT  Raphanus raphanistrum subsp. maritimus
EY897915       --> GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAA-TCCAAAAT  Raphanus raphanistrum subsp. maritimus
EY900297       --> GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAA-TCCAAAAT  Raphanus raphanistrum subsp. maritimus
EX888861       --> GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAA-TCCAAAAT  Raphanus sativus var. oleiformis
EY939912       --> GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAA--TCCAAAAT  Raphanus sativus cv Early Scarlet Globe
EW733912       --> GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAAATCCAAAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD938533       --> GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAAATCCAAAAT  Raphanus sativus var. oleiformis
EV547854       --> GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAAATCCAAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762585       --> GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAA-TCCAAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533017       --> GTACAAAGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAA-TCCAAAAT  Raphanus raphanistrum subsp. maritimus
FD550852       --> GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAAATCCAAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964808       --> GTACAgg...........................................  Raphanus raphanistrum subsp. maritimus
FD949978       --> GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAA--TCCAAAAT  Raphanus sativus cv Early Scarlet Globe
FD576627       --> GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAA-TCCAAAAT  Raphanus sativus cv Rat-Tail Radish #3870
EX771585       --> GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAA-TCCAAAAT  Raphanus raphanistrum subsp. landra
EY899095       --> GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAAA-TCCAAAAT  Raphanus raphanistrum subsp. maritimus
FY445281       --> GTACAAGGCCTCAAAGCCTAACCTTTTCATGTAATAAAAA--TCCAAAAT  Raphanus sativus cv GSK3-1

               651    -    701
UN20089        --> CTTTACATGATT-CTCCTT-ATCCT--TTTTCAACCATCAGCTTAGGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529851       <-- CTTCACATGATT-CTCCTTTATCCT--TTTTCAACCATCAGCTTAGGCTT  Raphanus raphanistrum subsp. maritimus
EX892722       <-- CTTTACATGATT-CTCCTT-ATCCT--TTTTCAACCATCAGCTTAGGCTT  Raphanus sativus var. oleiformis
FD934884       <-- CTTTACATGATT-CTCCTT-ATCCT--TTTTCAACCATCAGCTTAGGCTT  Raphanus sativus var. oleiformis
EX766810       <-- CTTTACATGATT-CTCCTT-ATCCT--TTTTCAACCATCAGCTTAGGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546760       <-- CTTTACATGATT-CTCCTT-ATCCT--TTTTCAACCATCAGCTTAGGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935762       <-- CTTTACATGATTTCTCCTT-ATCCTCCTTTTCAACCATCAGCTTAGGCTC  Raphanus sativus cv Early Scarlet Globe
EV543648       <-- CTTTACATGATT-CTCCTT-ATCCT--TTTTCAACCATCAGCTTAGGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945554       <-- CTTTACATGATTTCTCCTT-ATCCTCCTTTTCAACCATCAGCTTAGGCTC  Raphanus sativus cv Early Scarlet Globe
FD581083       <-- CTTTACATGATT-CTCCTT-ATCCT--TTTTCAACCATCAGCTTAGGCTT  Raphanus sativus cv Rat-Tail Radish #3870
FD529325       <-- CTTCACATGATT-CTCCTTTATCCT--TTTTCAACCATCAGCTTAGGCTT  Raphanus raphanistrum subsp. maritimus
FD960713       <-- CTTCACATGATT-CTCCTTTATCCT--TTTTCAACCATCAGCTTAGGCTT  Raphanus raphanistrum subsp. maritimus
EY894107       <-- CTTTACATGATT-TTCCTTTATCCT--TTTTCAACCATCAGCTTAGGCTT  Raphanus raphanistrum subsp. maritimus
EX775637       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV524998       --> CTTCACATGATT-CTCCTTTATCCT--TTTTCAACCATCAGCTTAG-CTT  Raphanus raphanistrum subsp. maritimus
EY897915       --> CTTTACATGATT-CTCCTTTATCCT--TTTTCAACCATCAGCTT......  Raphanus raphanistrum subsp. maritimus
EY900297       --> CTTCACATGATT-CTCCTTTATCCT--TTTTCAACCATCAGCTTACGCTT  Raphanus raphanistrum subsp. maritimus
EX888861       --> CTTTACATGATT-CTCCTT-ATCCT--TTTTCAACCATCAGCTTAGGCTT  Raphanus sativus var. oleiformis
EY939912       --> CTTTACATGATTTCTCCTT-ATCCTCCTTTTCAACCATCAGCTTAG-CTC  Raphanus sativus cv Early Scarlet Globe
EW733912       --> CTTTACATGATT-CTCCTT-ATCCT--TTTTCA-CCATCAGCTTAG-CTT  Raphanus sativus cv Rat-Tail Radish #3870
FD938533       --> CTTTACATGATT-CTCCTT-ATCCT--TTTTCAACCATCAGC........  Raphanus sativus var. oleiformis
EV547854       --> CTTTACATGATT-CTCCTT-ATCCT--TTTTCAACCATCAGCTTAGGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762585       --> CTTTACATGATT-CTCCTT-ATCCT--TTTTCA-CCATCAGCTTAGGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533017       --> CTTCACATGATT-CTCCTTTATCCT--TTTTCAACCATCAGCTTA.....  Raphanus raphanistrum subsp. maritimus
FD550852       --> CTTTACATGATT-CTCCTT-ATCCT--TTTTCAACCATCAGCTTAG-CTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964808       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD949978       --> CTTTACATGATTTCTCCTT-ATCCTCCTTTTCAACCATCAGCTTAGGCTC  Raphanus sativus cv Early Scarlet Globe
FD576627       --> CTTTACATGATT-CTCCTT-ATCCT--TTTTCAACCATCAGCTTAGGCTT  Raphanus sativus cv Rat-Tail Radish #3870
EX771585       --> CTTTACATGATT-CTCCTTTATCCT--TTTTCAACCATCAGC........  Raphanus raphanistrum subsp. landra
EY899095       --> CTTCACATGATT-CTCCTTTATCCT--TTTTCAACCATCAGCTTAGGCTT  Raphanus raphanistrum subsp. maritimus
FY445281       --> CTTTACATGATTTCTCCTT-ATCCTCCTTTTCAACCATCAGCTTAGGCTC  Raphanus sativus cv GSK3-1

               701    -    751
UN20089        --> CTTGTTCCTCAGTCTGATCAAAACA-TCTTCTCTTGGATTTTCAAATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529851       <-- CTTGTTCCTCAGTCTGATCAAAACA-TCTTATCTTGGATTTTCAAATTTT  Raphanus raphanistrum subsp. maritimus
EX892722       <-- CTTGTTCCTCAGTCTGATCAAAACA-TCTTCTCTTGGAATTTCAAATTTT  Raphanus sativus var. oleiformis
FD934884       <-- CTTGTTCCTCAGTCTGATCTAAACA-TCTTCTCTTGGAATTTCAAATTTT  Raphanus sativus var. oleiformis
EX766810       <-- CTTGTTCCTCAGTCTGATCAAAACAATCTTCTCTTGGAATTTCAAATTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546760       <-- CTTGTTCCTCAGTCTGATCAAAACAATCTTCTCTTGGAATTTCAAATTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935762       <-- CTTGTTCCTCAGTCTGATCA--------AAACATTGGATTTTCAAATTTT  Raphanus sativus cv Early Scarlet Globe
EV543648       <-- CTTGTTCCTCAGTCTGATCAAAACAATCTTCTCTTGGAATTTCAAATTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945554       <-- CTTGTTCCTCAGTCTGATCA--------AAACATTGGATTTTCAAATTTT  Raphanus sativus cv Early Scarlet Globe
FD581083       <-- CTTGTTCCTCAGTCTGATCTAAACA-TCTTTTCTTGGAATTTCAAATTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD529325       <-- CTTGTTCCCCAGTCTGATCAAAACA-TCTTATCTTGGATTTTCAAATTTT  Raphanus raphanistrum subsp. maritimus
FD960713       <-- CTTGTTCCTCAGTCTGATCAAAACA-TCTTATCTTGGATTTTCAAATTTT  Raphanus raphanistrum subsp. maritimus
EY894107       <-- CTTGTTCCTCAGTTTGATCAAAACA-Ttt.....................  Raphanus raphanistrum subsp. maritimus
EX775637       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV524998       --> CTTGTTCCTCAGTCTGATCAAAACA-TCTTATCTTGGATTTTCAAATTTT  Raphanus raphanistrum subsp. maritimus
EY897915       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY900297       --> CTTGTTCCTCAGTCTGATCAAA-CA-TCTTATCTTGGATTTTCAA-TTTT  Raphanus raphanistrum subsp. maritimus
EX888861       --> CTTGTTCCTCAGTCTGAT................................  Raphanus sativus var. oleiformis
EY939912       --> CTTGTTCCTCAGTCTGATCAAAcattggattttcaattttgcatcttcaa  Raphanus sativus cv Early Scarlet Globe
EW733912       --> CTTGTTCCTCAGTCTGATCAAAACAATCTTCTCTTGGATTTTCAA-TTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD938533       --> ..................................................  Raphanus sativus var. oleiformis
EV547854       --> CTTGTTCCTCAGTCTGATCAAAACAATCTTCTCTTGGAATTTCAAATTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762585       --> CTTGTTCCTCAGTCTGATCAAACAA-TCTTCTCTTGGAATTTCAAATTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533017       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD550852       --> CTTGTTCCTCAGTCTGATCAAAACAATCTTCTCTTGGAatt.........  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964808       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD949978       --> CTTGTTCCTCAGTCTGATCAAAACA-Ttg.....................  Raphanus sativus cv Early Scarlet Globe
FD576627       --> CTTGTTCCTCAGTCTGATCTAAACA-TCTTCTCTTGGAATTTCAAATTTT  Raphanus sativus cv Rat-Tail Radish #3870
EX771585       --> ..................................................  Raphanus raphanistrum subsp. landra
EY899095       --> CTTGTTCCTCAGTCTGATCAAAACA-TCTTATCTTGGATTTTCAAATTTT  Raphanus raphanistrum subsp. maritimus
FY445281       --> CTTGTTCCTCAGTCTGATCAAAACA-T-------TGGATTTTCAAATTTT  Raphanus sativus cv GSK3-1

               751    -    801
UN20089        --> TGCATCTTTTATCAACTTT-GTTTTCTAGATATATGATAAGATATTCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529851       <-- TGCATCTTTTATCAACTTT-GTTTTCTAG.....................  Raphanus raphanistrum subsp. maritimus
EX892722       <-- TGCATCTTTTATCAACTTTTGTTTTCTAGATATATGATAAGATATTCAGA  Raphanus sativus var. oleiformis
FD934884       <-- TGCATCTTTTATCAACTTTTGTTTTCTAGATATATGATAAGATATTCAGA  Raphanus sativus var. oleiformis
EX766810       <-- TGCATCTTTT........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546760       <-- TGCATCTTTTATCAACTTTTGTTTTCTAGATATATGATAAGATATTCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935762       <-- TGCATCTTc.........................................  Raphanus sativus cv Early Scarlet Globe
EV543648       <-- TGCATCTTTTATCAACTTTTGTTTTCTAGATATATGATAAGATATTCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945554       <-- TGCATCTTT-ATCAACTTT-GTTTTCTAGATATATGATAAGATATTCAGA  Raphanus sativus cv Early Scarlet Globe
FD581083       <-- TGCATCTTTTAcc.....................................  Raphanus sativus cv Rat-Tail Radish #3870
FD529325       <-- TGCATCTTTTATCAACTTT-GTTTTCTAGATATATGATAAGATATTCAGA  Raphanus raphanistrum subsp. maritimus
FD960713       <-- TGCATCTTTTATCAACTTT-GTTTTCTAGATATATGATAAGATATTCAGA  Raphanus raphanistrum subsp. maritimus
EY894107       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX775637       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV524998       --> TGCATCTTT-ATCAACTTT-GTTTTCTAG.....................  Raphanus raphanistrum subsp. maritimus
EY897915       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY900297       --> TGCATCT...........................................  Raphanus raphanistrum subsp. maritimus
EX888861       --> ..................................................  Raphanus sativus var. oleiformis
EY939912       --> a.................................................  Raphanus sativus cv Early Scarlet Globe
EW733912       --> TGCATCTTT.........................................  Raphanus sativus cv Rat-Tail Radish #3870
FD938533       --> ..................................................  Raphanus sativus var. oleiformis
EV547854       --> TGCATCTTTTATCAACTTTTGTTTTCTAGATATATGATAAGATATTCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762585       --> TGCATCTTTTAa......................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533017       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD550852       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964808       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD949978       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD576627       --> TGCATCTTTTAcc.....................................  Raphanus sativus cv Rat-Tail Radish #3870
EX771585       --> ..................................................  Raphanus raphanistrum subsp. landra
EY899095       --> TGCATCTTTTATCAACTTT-GTTTTCTAGATATATGATAAGATATTCAGA  Raphanus raphanistrum subsp. maritimus
FY445281       --> TGCATCTTT-ATCAACTTT-GTTTTCTAGATATATGATAAGATATTCAGA  Raphanus sativus cv GSK3-1

               801    -    851
UN20089        --> GGACTCGTTTAAATTTTCAAAGCTTTGCTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV529851       <-- ................................
EX892722       <-- GGACTtgtct......................
FD934884       <-- GG..............................
EX766810       <-- ................................
FD546760       <-- GG..............................
EY935762       <-- ................................
EV543648       <-- GG..............................
FD945554       <-- GGACTTGTTT......................
FD581083       <-- ................................
FD529325       <-- GGACTC..........................
FD960713       <-- GGACTCGTTT......................
EY894107       <-- ................................
EX775637       <-- ................................
EV524998       --> ................................
EY897915       --> ................................
EY900297       --> ................................
EX888861       --> ................................
EY939912       --> ................................
EW733912       --> ................................
FD938533       --> ................................
EV547854       --> GG..............................
EX762585       --> ................................
FD533017       --> ................................
FD550852       --> ................................
FD964808       --> ................................
FD949978       --> ................................
FD576627       --> ................................
EX771585       --> ................................
EY899095       --> GGACTCGTTTAAATTTTCAAAGCTTTGCTGCT
FY445281       --> GG..............................