1      -     51
UN20091        --> TTTTTTGGAAACGTACCCAAATAAAAATAAACATAGTCATACTTTATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- ..................tttTAAAAATAAACATAGTCATACTTTATGAA  Raphanus raphanistrum subsp. maritimus
FD956311       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX897316       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX770377       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV550077       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536335       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569974       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD558301       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW716784       <-- ..................................................  Raphanus sativus var. oleiformis
EX747790       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW716345       <-- ..................................................  Raphanus sativus var. oleiformis
EY915805       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532266       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX889041       <-- ..................................................  Raphanus sativus var. oleiformis
FD948767       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX755882       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756423       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757162       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD987785       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV569297       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX756112       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914466       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950142       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD550785       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572238       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD528791       --> TTTTTTGGAAACGTACCCAAATAAAAATAAACATAGTCATACTTTATGAA  Raphanus raphanistrum subsp. maritimus
EV531337       --> ......................AAAAATAAACATAGTCATACTTTATGAA  Raphanus raphanistrum subsp. maritimus
EW721115       --> ......................AAAAATAAACATAGTCATACTTTATGAA  Raphanus sativus var. oleiformis
EY910506       --> ......................AAAAATAAACATAGTCATACTTTATGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554228       --> ......................AAAAATAAACATAGTCATACTTTATTAA  Raphanus raphanistrum subsp. landra
FD984561       --> ......................AAAAATAAACA--GTCATACTTTATTAA  Raphanus raphanistrum subsp. landra
FD944506       --> .......................AAAATAAACATAGTCATACTTTATGAA  Raphanus sativus cv Early Scarlet Globe
FD983763       --> ......................gAAAATAAACATAGTCATACTTTATTAA  Raphanus raphanistrum subsp. landra
EV574385       --> ............................AAAAATAGTCATACTTTATTAA  Raphanus raphanistrum subsp. landra
FD952218       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX760236       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774578       --> ..................................................  Raphanus raphanistrum subsp. landra
EY911579       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545428       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573874       --> ..................................................  Raphanus raphanistrum subsp. landra
EX901779       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
AB447925       --> ..................................................  Raphanus sativus cv Sakurajima Daikon var. niger

               51     -    101
UN20091        --> AATCCACAAATGACAACAGAAACATCGCACTCAAACACAAAAATCACACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- AATCCACAAATGACAACAGAAACATCGCACTCAAACACAAAAATCACACT  Raphanus raphanistrum subsp. maritimus
FD956311       <-- .....................tttttGCACTCAAACACAAAAATTACAGT  Raphanus sativus cv Rat-Tail Radish #3870
EX897316       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX770377       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV550077       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536335       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569974       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD558301       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW716784       <-- ..................................................  Raphanus sativus var. oleiformis
EX747790       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW716345       <-- ..................................................  Raphanus sativus var. oleiformis
EY915805       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532266       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX889041       <-- ..................................................  Raphanus sativus var. oleiformis
FD948767       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX755882       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756423       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757162       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD987785       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV569297       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX756112       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914466       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950142       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD550785       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572238       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD528791       --> AATCCACAAATGACAACAGAAACATCGCACTCAAACACAAAAATCACACT  Raphanus raphanistrum subsp. maritimus
EV531337       --> AATCCACAAATGACAACAGAAACATCGCACTCAAACACAAAAATCACACT  Raphanus raphanistrum subsp. maritimus
EW721115       --> AATCCACAAATGACAACAGAAACATCGCACTCAAACACAAAAATCACACT  Raphanus sativus var. oleiformis
EY910506       --> AATCCACAAATGACAACAGAAACATCGCACTCAAACACAAAAATCACACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554228       --> AATCCACAAATGACAACACAAACATCGCACTCAAACACAAAAATCACACT  Raphanus raphanistrum subsp. landra
FD984561       --> AATCCACAAATGACAACACAAACATCGCACTCAAACACAAAAATCACACT  Raphanus raphanistrum subsp. landra
FD944506       --> AATCCACAAATGACAACAGAAACATCGCACTCAAACACAAAAATTACAGT  Raphanus sativus cv Early Scarlet Globe
FD983763       --> AATCCACAAATGACAACACAAACATCGCACTCAAACACAAAAATCACACT  Raphanus raphanistrum subsp. landra
EV574385       --> AATCCACAAATGACAACACAAACATCGCACTCAAACACAAAAATCACACT  Raphanus raphanistrum subsp. landra
FD952218       --> ..........................GCACTCAAACACAAAAATTACAGT  Raphanus sativus cv Rat-Tail Radish #3870
EX760236       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774578       --> ..................................................  Raphanus raphanistrum subsp. landra
EY911579       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545428       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573874       --> ..................................................  Raphanus raphanistrum subsp. landra
EX901779       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
AB447925       --> ..................................................  Raphanus sativus cv Sakurajima Daikon var. niger

               101    -    151
UN20091        --> CAAACATAAGAAAACGTGAAACATAGTCTTTTTTTTTTTGAGAAACAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- CAAACATAAGAAAACGTGAAACATAGTCTTTTTTTT--TGAGAAACAACA
FD956311       <-- CAAACATAAGAAAACGTGAAACATAGTCTTTATTTT--TGAGAAACAACA
EX897316       <-- ..............................TTTTTTTTTGAGAAACAACA
EX770377       <-- .......................................GAGAAACAACA
EV550077       <-- .....................................atggGAAACAACA
EV536335       <-- ..................................................
EV569974       <-- ..................................................
FD558301       <-- ..................................................
EW716784       <-- ..................................................
EX747790       <-- ..................................................
EW716345       <-- ..................................................
EY915805       <-- ..................................................
FD532266       <-- ..................................................
EX889041       <-- ..................................................
FD948767       <-- ..................................................
EX755882       <-- ..................................................
EX756423       <-- ..................................................
EX757162       <-- ..................................................
FD987785       <-- ..................................................
EV569297       <-- ..................................................
EX756112       <-- ..................................................
EY914466       <-- ..................................................
FD950142       <-- ..................................................
FD550785       <-- ..................................................
FD572238       <-- ..................................................
FD528791       --> CAAACATAAGAAAACGTGAAACATAGTCTTTTTTTTTTTGAGAAACAACA
EV531337       --> CAAACATAAGAAAACGTGAAACATAGTCTTTTTTTTT--GAGAAACAACA
EW721115       --> CAAACATAAAAAAACGTGAAGCATAGTCTTTTTTTTTTTGAGAAACAACA
EY910506       --> CAAACATAAGAAAACGTGAAACAGTCTTTTTTTTTTTTTGAGAAACAACA
FD554228       --> CAAACATAAGAAAACGTGAAACATAGTCTTTTTTTTTTTGAGAAACAACA
FD984561       --> CAAACATAAGAAAACGTGAAACATAGTCTTTTTTTTT--GAGAAACAACA
FD944506       --> CAAACATAAGAAAACGTGAAACATAGTCTTTTATTTTTTGAGAAACAACA
FD983763       --> CAAACATAAGAAAACGTGAAACATAGTCTTTTTTTTTTTGAGAAACAACA
EV574385       --> CAAACATAAGAAAACGTGAAACATAGTCTTTTTTTTTTTGAGAAACAACA
FD952218       --> CAAACATAAGAAAACGTGAAACATAGTCTTTTATTTTTTGAGAAACAACA
EX760236       --> ...tttttttgaaaaaTGAAACATATTCTTTTTTTTCT--AGAAACAACA
EX774578       --> .......................................GAGAAACAACA
EY911579       --> .......................................GAGAAACAACA
EV545428       --> .....................................atggGAAACAACA
EV573874       --> .......................................ggGAAACAACA
EX901779       --> ..................................................
AB447925       --> ..................................................

               151    -    201
UN20091        --> TAAAACGTATTATTATTTAAGAAAAACAAACATAAAACGTATTTAGTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- TAAAACGTATTATTATTTAAGAAAAACAAACATAAAACGTATTTAGTCCA  Raphanus raphanistrum subsp. maritimus
FD956311       <-- TAAAACGTATTATTATT-AAGAAAAACAAACATAAAACGTATTTAGTCCA  Raphanus sativus cv Rat-Tail Radish #3870
EX897316       <-- TAAAACGTAT-ATTATTTAAGAAAA-CAAACATAAAACGTATTTAGTCCA  Raphanus sativus cv Early Scarlet Globe
EX770377       <-- TAAA-CGTATTATTATT-AAGAAAAACAAACATAAAACGTATTTAGTCCA  Raphanus raphanistrum subsp. landra
EV550077       <-- TAAAACGTATTATTATTTAAGAAAAACAAACATAAAACGTATTTAGTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536335       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569974       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD558301       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW716784       <-- ..................................................  Raphanus sativus var. oleiformis
EX747790       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW716345       <-- ..................................................  Raphanus sativus var. oleiformis
EY915805       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532266       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX889041       <-- ..................................................  Raphanus sativus var. oleiformis
FD948767       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX755882       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756423       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757162       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD987785       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV569297       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX756112       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914466       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950142       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD550785       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572238       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD528791       --> TAAAACGTATTATTATTTAAGAAAAACAAACATAAAACGTATTTAGTCCA  Raphanus raphanistrum subsp. maritimus
EV531337       --> TAAAACGTATTATTATTTAAGAAAAACAAACATAAAACGTATTTAGTCCA  Raphanus raphanistrum subsp. maritimus
EW721115       --> TAAAACGTATTATTATTTAAGAAAAACAAACATAAAACGTATTTAGTCCA  Raphanus sativus var. oleiformis
EY910506       --> TTAAACGTATTATTATTTAAGAAAAACAAACATAAAACGTATTTAGTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554228       --> TAAA-CGTATTATTATTTAAGAAAAACAAACATAAAACGTATTTAGTCCA  Raphanus raphanistrum subsp. landra
FD984561       --> TAAA-CGTATTATTATTTAAGAAAAACAAACATAAAACGTATTTAGTCCA  Raphanus raphanistrum subsp. landra
FD944506       --> TAAAACGTATTATTATTTAAGAAAAACAAACATAAAACGTATTTAGTCCA  Raphanus sativus cv Early Scarlet Globe
FD983763       --> TAAA-CGTATTATTATTTAAGAAAAACAAACATAAAACGTATTTAGTCCA  Raphanus raphanistrum subsp. landra
EV574385       --> TAAA-CGTATTATTATTTAAGAAAAACAAACATAAAACGTATTTAGTCCA  Raphanus raphanistrum subsp. landra
FD952218       --> TAAAACGTATTATTATTTAAGAAAAACAAACATAAAACGTATTTAGTCCA  Raphanus sativus cv Rat-Tail Radish #3870
EX760236       --> TAAAACGTATTATTATTAAAAAAAAACAAACATAAAACGTATATAGTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774578       --> TAAA-CGTATTATTATTTAAGAAAAACAAACATAAAACGTATTTAGTCCA  Raphanus raphanistrum subsp. landra
EY911579       --> TTAAACGTATTATTATTTAAGAAAAACAAACATAAAACGTATTTAGTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545428       --> TAAAACGTATTATTATTTAAGAAAAACAAACATAAAACGTATTTAGTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573874       --> TAAA-CGTATTATTATTTAAGAAAAACAAACATAAAACGTATTTAGTCCA  Raphanus raphanistrum subsp. landra
EX901779       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
AB447925       --> ..................................................  Raphanus sativus cv Sakurajima Daikon var. niger

               201    -    251
UN20091        --> TACGGAAATCCACACAAGTATGGCTCTGATGTAACCTTATTCATAGGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- TACGGAAATCCACACAAGTATGGCTCTGATGTAACCTTATTCATAGGGAA
FD956311       <-- TACGGAAATCCACACAAGTATGGCTCTGATGTAACCTTATTCATAGGGAA
EX897316       <-- TACGGAAATCCACACAAGTATGGCTCTGATGTAACTTTATTCATAGGGAA
EX770377       <-- TACGGAAATCCACACAAGTATGGCTCTGATGTAACCTTATTCATAGGGAA
EV550077       <-- TACGGAAATCCACACATGTATGGCTCTGATGTAACCTTATTCATAGGGAA
EV536335       <-- ..................................................
EV569974       <-- ..................................................
FD558301       <-- ..................................................
EW716784       <-- ..................................................
EX747790       <-- ..................................................
EW716345       <-- ..................................................
EY915805       <-- ..................................................
FD532266       <-- ..................................................
EX889041       <-- ..................................................
FD948767       <-- ..................................................
EX755882       <-- ..................................................
EX756423       <-- ..................................................
EX757162       <-- ..................................................
FD987785       <-- ..................................................
EV569297       <-- ..................................................
EX756112       <-- ..................................................
EY914466       <-- ..................................................
FD950142       <-- ..................................................
FD550785       <-- ..................................................
FD572238       <-- ..................................................
FD528791       --> TACGGAAATCCACACAAGTATGGCTCTGATGTAACCTTATTCATAGGGAA
EV531337       --> TACGGAAATCCACACAAGTATGGCTCTGATGTAACCTTATTCATAGGGAA
EW721115       --> TACGGAAATCCACACAAGTATGGCTCTGATGTAACCTTATTCATAGGGAA
EY910506       --> TACGGAAATCCACACAAGTTTGGCTCTGATGTAACCTTATTCATAGGGAA
FD554228       --> TACGGAAATCCACACAAGTATGGCTCTGATGTAACCTTATTCATAGGGAA
FD984561       --> TACGGAAATCCACACAAGTATGGCTCTGATGTAACCTTATTCATAGGGAA
FD944506       --> TACGGAAATCCACACAAGTATGGCTCTGATGTAACCTTATTCATAGGGAA
FD983763       --> TACGGAAACCCACACAAGTATGGCTCCGATGTAACCTTATTCATAGGGAA
EV574385       --> TACGGAAATCCACACAAGTATGGCTCTGATGTAACCTTATTCATAGGGAA
FD952218       --> TACGGAAATCCACACAAGTATGGCTCTGATGTAACCTTATTCATAGGGAA
EX760236       --> TACGGAAATCCACACAAGAATGGCTCTGATGTAACCTTATTCATAGGGAA
EX774578       --> TACGGAAATCCACACAAGTATGGCTCTGATGTAACCTTATTCATAGGGAA
EY911579       --> TACGGAAATCCACACAAGTTTGGCTCTGATGTAACCTTATTCATAGGGAA
EV545428       --> TACGGAAATCCACACATGTATGGCTCTGATGTAACCTTATTCATAGGGAA
EV573874       --> TACGGAAATCCACACAAGTATGGCTCTGATGTAACCTTATTCATAGGGAA
EX901779       --> ..................................................
AB447925       --> ..................................................

               251    -    301
UN20091        --> ATCAAGAAACGGACCCAACAACGATTTCAGCTGGTGATTGGAGCGAAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- ATCAAGAAACGGACCCAACAACGATTTCAGCTGGTGATTGGAGCGAAATA
FD956311       <-- ATCAAGAAACGGACCCGACAACGATTTCAGCTGGTGATTGGAGCGAAATA
EX897316       <-- ATCAAGAAACGGACCCAACAACGATTTCAGCTGGTGATTGGAGCGAAATA
EX770377       <-- ATCAAGAAACGGACCCAACAACGATTTCAGCTGGTGATTGGAGCGAAATA
EV550077       <-- ATCAAGAAACGGACCCAACAACGATTTCAGCTGGTGATTGGAGCGAAATA
EV536335       <-- ..................................................
EV569974       <-- ..................................................
FD558301       <-- ..................................................
EW716784       <-- ..................................................
EX747790       <-- ..................................................
EW716345       <-- ..................................................
EY915805       <-- ..................................................
FD532266       <-- ..................................................
EX889041       <-- ..................................................
FD948767       <-- ..................................................
EX755882       <-- ..................................................
EX756423       <-- ..................................................
EX757162       <-- ..................................................
FD987785       <-- ..................................................
EV569297       <-- ..................................................
EX756112       <-- ..................................................
EY914466       <-- ..................................................
FD950142       <-- ..................................................
FD550785       <-- ..................................................
FD572238       <-- ..................................................
FD528791       --> ATCAAGAAACGGACCCAACAACGATTTCAGCTGGTGATTGGAGCGAAATA
EV531337       --> ATCAAGAAACGGACCCAACAACGATTTCAGCTGGTGATTGGAGCGAAATA
EW721115       --> ATCAAGAAACGGACCCAACAACGATTTCAGCTGGTGATTGGAGCGAAATA
EY910506       --> ATCAAGAAACGGACCCAACAACGATTTCAGCTGGTGATTGGAGCGAGATA
FD554228       --> ATCAAGAAACGGACCCAACAACGATTTCAGCTGGTGATTGGAGCGAAATA
FD984561       --> ATCAAGAAACGGACCCAACAACGATTTCAGCTGGTGATTGGAGCGAAATA
FD944506       --> ATCAAGAAACGGACCCGACAACGATTTCAGCTGGTGATTGGAGCGAAATA
FD983763       --> ATCAAGAAACGGACCCAACAACGATTTCAGCTGGTGATTGGAGCGAAATA
EV574385       --> ATCAAGAAACGGACCCAACAACGATTTCAGCTGGTGATTGGAGCGAAATA
FD952218       --> ATCAAGAAACGGACCCGACAACGATTTCAGCTGGTGATTGGAGCGAAATA
EX760236       --> ATCAAGAAACGGACCCAACAATGATTTCAGCTGGTGATTGGAGCGAAATA
EX774578       --> ATCAAGAAACGGACCCAACAACGATTTCAGCTGGTGATTGGAGCGAAATA
EY911579       --> ATCAAGAAACGGACCCAGCAACGATTTCAGCTGGTGATTGGAGCGAAATA
EV545428       --> ATCAAGAAACGGACCCAACAACGATTTCAGCTGGTGATTGGAGCGAAATA
EV573874       --> ATCAAGAAACGGACCCAACAACGATTTCAGCTGGTGATTGGAGCGAAATA
EX901779       --> ..................................................
AB447925       --> ..................................................

               301    -    351
UN20091        --> AGCTCCAAGAGAATTGAGTTGCGAGTCAGCGAGGCCATGAAAACCAACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- AGCTCCAAGAGAATTGAGTTGCGAGTCAGCGAGGCCATGAAAACCAACGA
FD956311       <-- AGCTCCAAGAGAATTGAGTTGCGAGTCAGCGAGGCCATGAAAACCAACGA
EX897316       <-- AGCTCCAAGAGAATTGAGTTGCGAGTCAGCGAGGCCATGAAAACCAACGA
EX770377       <-- AGCTCCAAGAGAATTGAGTTGCGAGTCAGCGAGGCCATGAAAACCAACGA
EV550077       <-- AGCTCCAAGAGAATTGAGTTGCGAGTCAGCGAGGCCATGAAAACCAACGA
EV536335       <-- ................................................GA
EV569974       <-- ..................................................
FD558301       <-- ..................................................
EW716784       <-- ..................................................
EX747790       <-- ..................................................
EW716345       <-- ..................................................
EY915805       <-- ..................................................
FD532266       <-- ..................................................
EX889041       <-- ..................................................
FD948767       <-- ..................................................
EX755882       <-- ..................................................
EX756423       <-- ..................................................
EX757162       <-- ..................................................
FD987785       <-- ..................................................
EV569297       <-- ..................................................
EX756112       <-- ..................................................
EY914466       <-- ..................................................
FD950142       <-- ..................................................
FD550785       <-- ..................................................
FD572238       <-- ..................................................
FD528791       --> AGCTCCAAGAAAATTGAGTTGCGAGTCAGCGAGGCCATGAAAACCAACGA
EV531337       --> AGCTCCAAGAGAATTGAGTTGCGAGTCAGCGAGGCCATGAAAACCAACGA
EW721115       --> AGCTCCAAGAAAATTGAGTTGCGAGTCAGCGAGGCCATGAAAACCAACGA
EY910506       --> AGCTCCAAGAGAATTGAGTTGCGAGTCAGCGAGGCCATGAAAACCAACGA
FD554228       --> AGCTCCAAGAAAATTGAGTTGCGAGTCAGCGAGGCCATGAAAACCAACGA
FD984561       --> AGCTCCAAGAGAATTGAGTTGCGAGTCAGCGAGGCCATGAAAACCAACGA
FD944506       --> AGCTCCAAGAGAATTGAGTTGCGAGTCAGCGAAGCCATGAAAACCAACGA
FD983763       --> AGCTCCAAGAGAATTGAGTTGCGAGTCAGCGAGGCCATGAAAACCAACGA
EV574385       --> AGCTCCAAGAAAATTGAGTTGCGAGTCAGCGAGGCCATGAAAACCAACGA
FD952218       --> AGCTCCAAGAGAATTGAGTTGCGAGTCAGCGAGGCCATGAAAACCAACGA
EX760236       --> AGCTCCAAGAGAATTGATTTGCGAGTCAGCGAGGCCATGAAAACCAACAA
EX774578       --> AGCTCCAAGAGAATTGAGTTGCGAGTCAGCGAGGCCATGAAAACCAACGA
EY911579       --> AGCTCCAAGAGAATTGAGTTGCGAGTCAGCGAGGCCATGAAAACCAACGA
EV545428       --> AGCTCCAAGAGAATTGAGTTGCGAGTCAGCGAGGCCATGAAAACCAACGA
EV573874       --> AGCTCCAAGAAAATTGAGTTGCGAGTCAGCGAGGCCATGAAAACCAACGA
EX901779       --> ........................................AAACCAACGA
AB447925       --> ..................................................

               351    -    401
UN20091        --> TCTTCTTGTCTTTCACTTCAAGTGAAATATCTGTACCTTCTTCTCC-AGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- TCTTCTTGTCTTTCACTTCAAGTGAAATATCTGTACCTTCTTCTCC-AGG
FD956311       <-- TCTTCTTGTCTTTCACTTCAAGTGAAATATCTGTACCTTCTTCTCC-AGG
EX897316       <-- TCTTCTTGTCTTTCACTTCAAGTGAAATATCTGTACCTTCTTCTCC-AGG
EX770377       <-- TCTTCTTGTCTTTCACTTCAAGTGAAATATCTGTACCTTCTTCTCC-AGG
EV550077       <-- TCTTCTTGTCCTTCACTTCAAGTGAAATATCTGTACCTTCTTCTCC-AGG
EV536335       <-- TCTTCTTGTCTTTCACTTCAAGTGAAATATCTGTACCT-CTTCTCCCAGG
EV569974       <-- ..................................................
FD558301       <-- ..................................................
EW716784       <-- ..................................................
EX747790       <-- ..................................................
EW716345       <-- ..................................................
EY915805       <-- ..................................................
FD532266       <-- ..................................................
EX889041       <-- ..................................................
FD948767       <-- ..................................................
EX755882       <-- ..................................................
EX756423       <-- ..................................................
EX757162       <-- ..................................................
FD987785       <-- ..................................................
EV569297       <-- ..................................................
EX756112       <-- ..................................................
EY914466       <-- ..................................................
FD950142       <-- ..................................................
FD550785       <-- ..................................................
FD572238       <-- ..................................................
FD528791       --> TCTTCTTGTCTTTCACTTCAAGTGAAATATCTGTACCTTCTTCTCC-AGG
EV531337       --> TCTTCTTGTCTTTCACTTCAAGTGAAATATCTGTACCTTCTTCTCC-AGG
EW721115       --> TCTTCTTGTCTTTCACTTCAAGTGAAATATCTGTACCTTCTTCTCC-AGG
EY910506       --> TCTTCTTGTCTTTCACTTCAAGTGAAATATCTGTACCTTCTTCTCC-AGG
FD554228       --> TCTTCTTGTCTTTCACTTCAAGTGAAATATCTGTACCTTCTTCTCC-AGG
FD984561       --> TCTTCTTGTCTTTCACTTCAAGTGAAATATCTGTACCTTCTTCTCC-AGG
FD944506       --> TCTTCTTGTCTTTCACTTCAAGTGAAATATCTGTACCTTCTTCTCC-AGG
FD983763       --> TCTTCTTGTCTTTCACTTCAAGTGAAATATCTGTACCTTCTTCTCC-AGG
EV574385       --> TCTTCTTGTCTTTCACTTCAAGTGAAATATCTGTACCTTCTTCTCC-AGG
FD952218       --> TCTTCTTGTCTTTCACTTCAAGTGAAATATCTGTACCTTCTTCTCC-AGG
EX760236       --> TCTTCTTGTCTTTCACTTCAAGTGAAATATCTGTACCTTCTTCTCC-AGG
EX774578       --> TCTTCTTGTCTTTCACTTCAAGTGAAATATCTGTACCTTCTTCTCC-AGG
EY911579       --> TCTTCTTGTCTTTCACTTCAAGTGAAATATCTGTACCTTCTTCTCC-AGG
EV545428       --> TCTTCTTGTCCTTCACTTCAAGTGAAATATCTGTACCTTCTTCTCC-AGG
EV573874       --> TCTTCTTGTCTTTCACTTCAAGTGAAATATCTGTACCTTCTTCTCC-AGG
EX901779       --> TCTTCTTGTCTTTCACTTCAAGTGAAATATCTGTACCTTCTTCTCC-AGG
AB447925       --> ................................................GG

               401    -    451
UN20091        --> AACTTTTTCAAATCCATAACATTCTGAAGTCTTTGTGTTGGTTATGAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- AACTTTTTCAAATCCATAACATTCTGAAGTCTTTGTGTTGGTTATGAATT
FD956311       <-- AACTTTTTCAAATCCATAACATTCTGAAGTCTTTGTGTTGGTTATGAATT
EX897316       <-- AACTTTTTCAAATCCATAACATTCTGAAGTCTTTGTGTTGGTTATGAATT
EX770377       <-- AACTTTTTCAAATCCATAACATTCTGAAGTCTTTGTGTTGGTTATGAATT
EV550077       <-- AACTTTTTCAAATCCATAACc.............................
EV536335       <-- AACTTTTTCAAATCCATAACATTCTGAAGTCTTTGTGTTGGTTATGAATT
EV569974       <-- ...................................gtgTGGTTATGAATT
FD558301       <-- ..................................................
EW716784       <-- ..................................................
EX747790       <-- ..................................................
EW716345       <-- ..................................................
EY915805       <-- ..................................................
FD532266       <-- ..................................................
EX889041       <-- ..................................................
FD948767       <-- ..................................................
EX755882       <-- ..................................................
EX756423       <-- ..................................................
EX757162       <-- ..................................................
FD987785       <-- ..................................................
EV569297       <-- ..................................................
EX756112       <-- ..................................................
EY914466       <-- ..................................................
FD950142       <-- ..................................................
FD550785       <-- ..................................................
FD572238       <-- ..................................................
FD528791       --> AACTTTTTCAAATCCATAACATTCTGAAGTCTTTGTGTTGGTTATGAATT
EV531337       --> AACTTTTTCAAATCCATAACATTCTGAAGTCTTTGTGTTGGTTATGAATT
EW721115       --> AACTTTTTCAAATCCATAACATTCTGAAGTCTTTGTGTTGGTTATGAATT
EY910506       --> AACTTTTTCAAATCCATAACATTCTGAAGTCTTTGTGTTGGTTATGAATT
FD554228       --> AACTTTTTCAAATCCATAACATTCTGAAGTCTTTGTGTTGGTTGTGAATT
FD984561       --> AACTTTTTCAAATCCATAACATTCTGAAGTCTTTGTGTTGGTTATGAATT
FD944506       --> AACTTTTTCAAATCCATAACATTCTGAAGTCTTTGTGTTGGTTATGAATT
FD983763       --> AACTTTTTCAAATCCATAACATTCTGAAGTCTTTGTGTTGGTTATGAATT
EV574385       --> AACTTTTTCAAATCCATAACATTCTGAAGTCTTTGTGTTGGTTATGAATT
FD952218       --> AACTTTTTCAAATCCATAACATTCTGAAGTCTTTGTGTTGGTTATGAATT
EX760236       --> AACTTTTTCAAATCCATAACATTCTGAAGTCTTTGTGTTGGTTATGAATT
EX774578       --> AACTTTTTCAAATCCATAACATTCTGAAGTCTTTGTGTTGGTTATGAATT
EY911579       --> AACTTTTTCAAATCCATAACATTCTGAAGTCTTTGTGTTGGTTATGAATT
EV545428       --> AACTTTTTCAAATCCATAACc.............................
EV573874       --> AACTTTTTCAAATCCATAACATTCTGAAGTCTTTGTGTTGGTTATGAATT
EX901779       --> AACTTTTTCAAATCCATAACATTCTGAAGTCTTTGTGTTGGTTATGAATT
AB447925       --> AACTTTTTCAAATCCATAACATTCTGAAGTCTTTGTGTTGGTTATGAATT

               451    -    501
UN20091        --> TAATTCCCACAATCTTGTTGGATGAATCAGACCAACCCTTCGCAGAAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- TAATTCCCACAATCTTGTTGGATGAATCAGACCAACCCTTCGCAGAAAGT
FD956311       <-- TAATTCCCACAATCTTGTTGGATGAATCAGACCAACCCTACGCAGAAAGT
EX897316       <-- TAATTCCCACAATCTTGTTGGATGAATCAGACCAACCCTTCGCAGAAAGT
EX770377       <-- TAATTCCCACAATCTTGTTGGATGA-TCAGACCAACCCTTCGCAGAAAGT
EV550077       <-- ..................................................
EV536335       <-- TAATTCCCACAATCTTGTTGGATGAATCAGACCAACCCTTCGCAGAAAGT
EV569974       <-- TAATTCCCGCAATCTTGTTGGATGAATCAGACCAACCCTTCGCAGAAAGT
FD558301       <-- .....CCCACAATCT-G-TGGATG-ATCAGACCA-CCCTTCGCAGAAAGT
EW716784       <-- ..................................................
EX747790       <-- ..................................................
EW716345       <-- ..................................................
EY915805       <-- ..................................................
FD532266       <-- ..................................................
EX889041       <-- ..................................................
FD948767       <-- ..................................................
EX755882       <-- ..................................................
EX756423       <-- ..................................................
EX757162       <-- ..................................................
FD987785       <-- ..................................................
EV569297       <-- ..................................................
EX756112       <-- ..................................................
EY914466       <-- ..................................................
FD950142       <-- ..................................................
FD550785       <-- ..................................................
FD572238       <-- ..................................................
FD528791       --> TAATTCCCACAATCTTGTTGGATGAATCAGACCAACCCTTCGCAGAAAGT
EV531337       --> TAATTCCCACAATCTTGTTGGATGAATCAGACCAACCCTTCGCAGAAAGT
EW721115       --> TAATTCCCACAATCTTGTTGGATGAATCAAACCAACCCTTCCCAAAAAGT
EY910506       --> TAATTCCCACAATCTTGTTGGATGAATCAAACCAACCCTTCGCAAAAAGT
FD554228       --> TAATTCCCACAATCTTGTTGGATGAATCAGACCAACCCTTCGCAGAAAGT
FD984561       --> TAATTCCCACAATCTTGTTGGATGAATCAGACCAACCCTTCGCAGAAAGT
FD944506       --> TAATTCCCACAATCTTGTTGGATGAATCGGACCAACCCTTCGCAGAAAGT
FD983763       --> TAATTCCCACAATCTTGTCGGATGAATCAGACCAACCCTTCGCAGAAAGT
EV574385       --> TAATTCCCGCAATCTTGTTGGATGAATCAAACCAACCCTTCGCAAAAAGT
FD952218       --> TAATTCCCACAATCTTGTTGGATGAATCAGACCAACCCTACGCAGAAAGT
EX760236       --> TAATTCCCACAATCTTGTTGGATGAATCAGACCAACCCTTCACAGAAAGT
EX774578       --> TAATTCCCACAATCTTGTTGGATGA-TCAGACCAACCCTTCGCAGAAAGT
EY911579       --> TAATTCCCACAATCTTGTTGGATGAATCAGACCAACCCTTCGCAGAAAGT
EV545428       --> ..................................................
EV573874       --> TAATTCCCACAATCTTGTTGGATGAATCAAACCAACCCTTCGCAGAAAGT
EX901779       --> TAATTCCCACAATCTTGTTGGATGAATCAAACCAACCtt...........
AB447925       --> TAATTCCCACAATCTTGTTGGATGAATCAGACCAACCCTTCGCAGAAAGT

               501    -    551
UN20091        --> AAATACTCGTTGGGATGACTTATCTCAAACGTTCTAATGGAAGATCTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- AAATACTCGTTGGGATGACTTATCTCAAACGTTCTAATGGAAGATCTGCC
FD956311       <-- AAATACTCGTTGGGATGACTTATCTCAAACGTTCTAATGGAAGATCTGCC
EX897316       <-- AAATACTCGTTGGGATGACTTATCTCAAACGTTCTAATGGAAGATCTACC
EX770377       <-- AAATACTCGTTGGGATGACTTATCTCAAACGTTCTAATGGAAGATCTGCC
EV550077       <-- ..................................................
EV536335       <-- AAATACTCGTTGGGATGACTTATCTCAAACGTTCTAATGGAAGATCTGCC
EV569974       <-- AAATACTCGTTGGGATGACTTATCTCAAACGTTCTAATGGAAGATCTGCC
FD558301       <-- AAATACTCGTTGGGATGACT-ATCTCAAACGTTCTAATGGAAGATCTGCC
EW716784       <-- ...TACTCGT-GGGATGACT-ATCTCAAACGTTCTAATGGA-GATCTGCC
EX747790       <-- .....CTCGT-GGGATGACT-ATCTCAAACGTTCTAATGGAAGATCTGCC
EW716345       <-- ..................................................
EY915805       <-- ..................................................
FD532266       <-- ..................................................
EX889041       <-- ..................................................
FD948767       <-- ..................................................
EX755882       <-- ..................................................
EX756423       <-- ..................................................
EX757162       <-- ..................................................
FD987785       <-- ..................................................
EV569297       <-- ..................................................
EX756112       <-- ..................................................
EY914466       <-- ..................................................
FD950142       <-- ..................................................
FD550785       <-- ..................................................
FD572238       <-- ..................................................
FD528791       --> AAATACTCGTTGGGATGACTTATCTCAAACGTTCTAATGGAAGATCTGCC
EV531337       --> AAATACTCGTTGGGATGACTTATCTCAAACGTTCTAATGGAAGATCTGCC
EW721115       --> AAATACTCGTTGGGATGACTTATCTCAAACGTTCTAATGGAAGATCTGCC
EY910506       --> AAATACTCGTTGGGATGACTTATCTCAAACGTTCTAATGGAAGATCTGCC
FD554228       --> AAATACTCGTTGGGATGACTTATCTCAAACGTTCTAATGGAAGATCTGCC
FD984561       --> AAATACTCGTTGGGATGACTTATCTCAAACGTTCTAACGGAAGATCTGCC
FD944506       --> AAATACTCGTTGGGATGACCTATCTCAAACGTTCTAATGGAAGATCTGCC
FD983763       --> AAATACTCGTTGGGATGACTTATCTCAAACGTTCTAATGGAAGATCTGCC
EV574385       --> AAATACTCGTTGGGATGACTTATCTCAAACGTTCTAATGGAAGATCTGCC
FD952218       --> AAATACTCGTTGGGATGACTTATCTCAAACGTTCTAATGGAAGATCTGCC
EX760236       --> AAATACTCGTTGGGATGACTTATCTCAAACGTTCTAATGGAAGATCTGCC
EX774578       --> AAATACTCGTTGGGATGACTTATCTCAAACGTTCTAATGGAAGATCTGCC
EY911579       --> AAATACTCGTTGGGATGACTTATCTCAAACGTTCTAATGGAAGATCTGCC
EV545428       --> ..................................................
EV573874       --> AAATACTCGTTGGGATGACTTATCTCAAACGTTCTAATGGAAGATCTGCC
EX901779       --> ..................................................
AB447925       --> AAATACTCGTTGGGATGACTTATCTCAAACGTTCTAATGGAAGATCTGCC

               551    -    601
UN20091        --> ACCCTTCACACCATGGGCGGGTCCTTCCTTTGTCTGTCCGTTCTTGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- ACCCTTCACACCATGGGCGGGTCCTTCCTTTGTCTGTCCATTCTTGAGAT  Raphanus raphanistrum subsp. maritimus
FD956311       <-- ACCCTTCACACCATGGGCGGGTCCTTCCTTTGTCTGTCCGTTCTTGAGAT  Raphanus sativus cv Rat-Tail Radish #3870
EX897316       <-- ACCCTTCACACCATGGGCGGGTCCTTCCTTTGTCTGTCCATTCTTGAGAT  Raphanus sativus cv Early Scarlet Globe
EX770377       <-- ACCCTTCACACCATGGGCGGGTCCTTCCTTTGTTTGTCCGTTCTTGAGAT  Raphanus raphanistrum subsp. landra
EV550077       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536335       <-- ACCCTTCACACCATGGGCGGGTCCTTCCTTTGTCTGTCCGTTCTTGAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569974       <-- ACCCTTCACACCATGGGCGGGTCCTTCCTTTGTTTGTCCGTTCTTGAGAT  Raphanus raphanistrum subsp. landra
FD558301       <-- ACCCTTCACACCATGGGCGGGTCCTTCCTTTGTTTGTCCGTTCTTGAGAT  Raphanus raphanistrum subsp. landra
EW716784       <-- ACCCTTCACACCATGGGCGG-T-CTTCCTTTGTCTGTCCGTTCTTGAGAT  Raphanus sativus var. oleiformis
EX747790       <-- ACCCTTCACACCATGGGCGGGTCCTTCCTTTGTCTGTCCGTTCTTGAGAT  Raphanus raphanistrum subsp. maritimus
EW716345       <-- ..........................tCTTTGTCTGTCTGTTCTTGAGAT  Raphanus sativus var. oleiformis
EY915805       <-- ........................cttCTTTGTCTGTCCATTCTTGAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532266       <-- ..............................TGTCTGTCCATTCTTGAGAT  Raphanus raphanistrum subsp. maritimus
EX889041       <-- ...............................GTCTGTCCGTTCTTGAGAT  Raphanus sativus var. oleiformis
FD948767       <-- ...............................GTCTGTCCGTTCTTGAGAT  Raphanus sativus cv Early Scarlet Globe
EX755882       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756423       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757162       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD987785       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV569297       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX756112       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914466       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950142       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD550785       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572238       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD528791       --> ACCCTTCACACCATGGGCGGGTCCTTCCTTTGTCTGTCCATTCTTGAGAT  Raphanus raphanistrum subsp. maritimus
EV531337       --> ACCCTTCACACCATGGGCGGGTCCTTCCTTTGTCTGTCCATTCTTGAGAT  Raphanus raphanistrum subsp. maritimus
EW721115       --> ACCCTTCACACCATGGGCGGGTCCTTCCTTTGTCTGTCCGTTCTTGAGAT  Raphanus sativus var. oleiformis
EY910506       --> ACCCTTCACACCATGGGCGGGTCCTTCCTTTGTCTGTCCATTCTTGAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554228       --> ACCCTTCACACCATGGGCGGGTCCTTCCTTTGTTTGTCCGTTCTTGAGAT  Raphanus raphanistrum subsp. landra
FD984561       --> ACCCTTCACACCATGGGCGGGTCCTTCCTTTGTCTGTACATTCTTGAGAT  Raphanus raphanistrum subsp. landra
FD944506       --> ACCCTTCACACCATGGGCGGGTCCTTCCTTTGTCTGTCCGTTCTTGAGAT  Raphanus sativus cv Early Scarlet Globe
FD983763       --> ACCCTTCACACCATGGGCGGGTCCTCCCTTTGTTTGTCCGTTCTTGAGAT  Raphanus raphanistrum subsp. landra
EV574385       --> ACCCTTCACACCATGGGCGGGTCCTTCCTTTGTTTGTCCGTTCTTGAAAT  Raphanus raphanistrum subsp. landra
FD952218       --> ACCCTTCACACCATGGGCGGGTCCTTCCTTTGTCTGTCCGTTCTTGAGAT  Raphanus sativus cv Rat-Tail Radish #3870
EX760236       --> ACCCTTCACACCATGGGCGGGTCCTTCCTTTGTCTGTCCGTTCTTGAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774578       --> ACCCTTCACACCATGGGCGGGTCCTTCCTTTGTTTGTCCGTTCTTGAGAT  Raphanus raphanistrum subsp. landra
EY911579       --> ACCCTTCACACCATGGGCGGGTCCTTCCTTTGTCTGTCCATTCTTGAGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545428       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573874       --> ACCCTTCACACCATGGGCGGGTCCTTCCTTTGTTTGTCCGTTCTTGAGAT  Raphanus raphanistrum subsp. landra
EX901779       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
AB447925       --> ACCCTTCACACCATGGGCGGGTCCTTCCTTTGTCTGTCCGTTCTTGAGAT  Raphanus sativus cv Sakurajima Daikon var. niger

               601    -    651
UN20091        --> AATCAAACCTGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- AATCAAACCTGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
FD956311       <-- AATCAAACCTGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
EX897316       <-- AATCAAACCTGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
EX770377       <-- AATCAAACCTGGTTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
EV550077       <-- ..................................................
EV536335       <-- AATCAAACCTGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
EV569974       <-- AATCAAACCTGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
FD558301       <-- AATCAAACCTGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
EW716784       <-- A-TCAAACCTGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
EX747790       <-- AATCAAACCTGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
EW716345       <-- AATCAAAC-TGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
EY915805       <-- AATCAAAC-TGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
FD532266       <-- AATCAAACGTGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
EX889041       <-- AATCAAAC-TGATTTGCTCAATACCTCTACCCAACTGCGATATGTATCTT
FD948767       <-- AATCAAAC-TGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
EX755882       <-- ...........ATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
EX756423       <-- ...........ATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
EX757162       <-- ......acgtaATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
FD987785       <-- ...........ATTTGCTCAATACCTCTACC-AACCGCGATATGTATCTT
EV569297       <-- ............TTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
EX756112       <-- ............TTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
EY914466       <-- ............TTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
FD950142       <-- ............TTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
FD550785       <-- ..................................................
FD572238       <-- ..................................................
FD528791       --> AATCAAACCTGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
EV531337       --> AATCAAACCTGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
EW721115       --> AATCAAACCTGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
EY910506       --> AATCAAACCTGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
FD554228       --> AATCAAACCTGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
FD984561       --> AATCAAACCTGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
FD944506       --> AATCAAACCTGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
FD983763       --> AATCAAACCTGATTTGCTCAATACCTCTACC-AACCGCGATATGTATCTT
EV574385       --> AATCAAACCTGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
FD952218       --> AATCAAACCTGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
EX760236       --> AATCAAACCTAATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
EX774578       --> AATCAAACCTGGTTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
EY911579       --> AATCAAACCTGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
EV545428       --> ..................................................
EV573874       --> AATCAAACCTGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT
EX901779       --> ..................................................
AB447925       --> AATCAAACCTGATTTGCTCAATACCTCTACC-AACTGCGATATGTATCTT

               651    -    701
UN20091        --> TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- TGTCACACCGTCGT--GCTCCTCC-ATCATCCCATTCATTGCCTCCGTTG
FD956311       <-- TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
EX897316       <-- TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
EX770377       <-- TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
EV550077       <-- ..................................................
EV536335       <-- TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
EV569974       <-- TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
FD558301       <-- TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTAATTGCCTCCGTTG
EW716784       <-- TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
EX747790       <-- TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
EW716345       <-- TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
EY915805       <-- TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
FD532266       <-- TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
EX889041       <-- TGTCACACCGTCGTGATCACCTCCCATCATCCCATTCATTGCCTCCGTTG
FD948767       <-- TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
EX755882       <-- TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
EX756423       <-- TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCCTTG
EX757162       <-- TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCCTTG
FD987785       <-- TGTCACACCGTCGTGATCAACTCC-ATCATCCCATTCATTGCCTCCGTTG
EV569297       <-- TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
EX756112       <-- TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCCTTG
EY914466       <-- TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
FD950142       <-- TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
FD550785       <-- ............GTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
FD572238       <-- ..................................................
FD528791       --> TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
EV531337       --> TGTCACACCGTCGTG--CTCCTCC-ATCATCCCATTCATTGCCTCCGTTG
EW721115       --> TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
EY910506       --> TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
FD554228       --> TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTAATTGCCTCCGTTG
FD984561       --> TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
FD944506       --> TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
FD983763       --> TGTCACACCGTCGTGATCAACTCC-ATCATCCCATTCATTGCCTCCGTTG
EV574385       --> TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
FD952218       --> TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
EX760236       --> TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCCTTG
EX774578       --> TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
EY911579       --> TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
EV545428       --> ..................................................
EV573874       --> TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG
EX901779       --> ..................................................
AB447925       --> TGTCACACCGTCGTGATCACCTCC-ATCATCCCATTCATTGCCTCCGTTG

               701    -    751
UN20091        --> CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCc..............
FD956311       <-- CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
EX897316       <-- CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
EX770377       <-- CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
EV550077       <-- ..................................................
EV536335       <-- CCACCTTGAGCGTCGAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
EV569974       <-- CCACCTTGAGCGTAAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
FD558301       <-- CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
EW716784       <-- CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
EX747790       <-- CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
EW716345       <-- CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
EY915805       <-- CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
FD532266       <-- CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
EX889041       <-- CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
FD948767       <-- CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
EX755882       <-- CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
EX756423       <-- CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
EX757162       <-- CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
FD987785       <-- CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
EV569297       <-- CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
EX756112       <-- CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
EY914466       <-- CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
FD950142       <-- CCACCTTGAGCGTCGAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
FD550785       <-- CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
FD572238       <-- ..................................................
FD528791       --> CCACCTTGAGCGTCAAGTTTTTGA..........................
EV531337       --> CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCc..............
EW721115       --> CCACCTTGAGCGTCAAGTTTTTGAGTACTAG...................
EY910506       --> CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
FD554228       --> CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
FD984561       --> CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
FD944506       --> CCACCTTG..........................................
FD983763       --> CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
EV574385       --> CCACCTTGAGCGTAAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
FD952218       --> CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
EX760236       --> CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
EX774578       --> CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
EY911579       --> CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
EV545428       --> ..................................................
EV573874       --> CCACCTTGAGCGTCAAGTTTTTGAGTACTAGATCCGCTTCCACTGTTTGA
EX901779       --> ..................................................
AB447925       --> CCACCTTGAGCGTCAAGTTTTTGAGT........................

               751    -    801
UN20091        --> GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- ..................................................
FD956311       <-- GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
EX897316       <-- GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
EX770377       <-- GTCACCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
EV550077       <-- ..................................................
EV536335       <-- GCCATCAACTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
EV569974       <-- GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
FD558301       <-- GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
EW716784       <-- GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
EX747790       <-- GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
EW716345       <-- GTCATCACCTATGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
EY915805       <-- GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
FD532266       <-- GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
EX889041       <-- GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
FD948767       <-- GTCACCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
EX755882       <-- GCCATCAACTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
EX756423       <-- GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
EX757162       <-- GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
FD987785       <-- GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
EV569297       <-- GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
EX756112       <-- GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
EY914466       <-- GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
FD950142       <-- GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
FD550785       <-- GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
FD572238       <-- ..................................................
FD528791       --> ..................................................
EV531337       --> ..................................................
EW721115       --> ..................................................
EY910506       --> GTCATCACCTCCGGA...................................
FD554228       --> GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTC...............
FD984561       --> GTCATCACCTttgaa...................................
FD944506       --> ..................................................
FD983763       --> GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
EV574385       --> GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
FD952218       --> GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
EX760236       --> GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
EX774578       --> GTCACCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
EY911579       --> GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGGCATCGATAG
EV545428       --> ..................................................
EV573874       --> GTCATCACCTCCGGAGTTAGAGCCGAAATAAGCTCCGATGG.........
EX901779       --> ..................................................
AB447925       --> ..................................................

               801    -    851
UN20091        --> CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCATTTTCACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD956311       <-- CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCc.........  Raphanus sativus cv Rat-Tail Radish #3870
EX897316       <-- CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCATTTTCACCT  Raphanus sativus cv Early Scarlet Globe
EX770377       <-- CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCATTTTCACCT  Raphanus raphanistrum subsp. landra
EV550077       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536335       <-- CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCACTTTCACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569974       <-- CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCATTTTCACCT  Raphanus raphanistrum subsp. landra
FD558301       <-- CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCATTTTCACCT  Raphanus raphanistrum subsp. landra
EW716784       <-- CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCATTTTCACCT  Raphanus sativus var. oleiformis
EX747790       <-- CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCGTTTTCACCT  Raphanus raphanistrum subsp. maritimus
EW716345       <-- CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCACTTTCACCT  Raphanus sativus var. oleiformis
EY915805       <-- CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCATTTTCACCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532266       <-- CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCATTTTCACCT  Raphanus raphanistrum subsp. maritimus
EX889041       <-- CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCATTTTCACCT  Raphanus sativus var. oleiformis
FD948767       <-- CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCATTTTCACCT  Raphanus sativus cv Early Scarlet Globe
EX755882       <-- CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCACTTTCACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756423       <-- CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCACTTTCACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757162       <-- CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCACTTTCACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD987785       <-- CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCATTTTCACCT  Raphanus raphanistrum subsp. landra
EV569297       <-- CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCATTTTCACCT  Raphanus raphanistrum subsp. landra
EX756112       <-- CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCACTTTCACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914466       <-- CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCATTTTCACCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950142       <-- CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCATTTTCACCT  Raphanus sativus cv Early Scarlet Globe
FD550785       <-- CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCATTTTCACCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572238       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD528791       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV531337       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW721115       --> ..................................................  Raphanus sativus var. oleiformis
EY910506       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554228       --> ..................................................  Raphanus raphanistrum subsp. landra
FD984561       --> ..................................................  Raphanus raphanistrum subsp. landra
FD944506       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD983763       --> C.................................................  Raphanus raphanistrum subsp. landra
EV574385       --> CATTACTGCTA.......................................  Raphanus raphanistrum subsp. landra
FD952218       --> CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCC..........  Raphanus sativus cv Rat-Tail Radish #3870
EX760236       --> CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCACTTTCACCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774578       --> CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCATTTTCACCT  Raphanus raphanistrum subsp. landra
EY911579       --> CATTACTGCTACGTCCATGGAATCCAATAAGCTTTTCTCCATTTTCACCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545428       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573874       --> ..................................................  Raphanus raphanistrum subsp. landra
EX901779       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
AB447925       --> ..................................................  Raphanus sativus cv Sakurajima Daikon var. niger

               851    -    901
UN20091        --> TTGAACTCGAATTCGGTTCCCTTCATCTCACCGAATAAAGGAGAGGTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- ..................................................
FD956311       <-- ..................................................
EX897316       <-- TTGAACTCGAATTCGGTTCC..............................
EX770377       <-- TTGAACTC..........................................
EV550077       <-- ..................................................
EV536335       <-- TTGAACTCGAATTCGGTTCCCTTCATCTCACCGAATAAAGGAGAGGTAAA
EV569974       <-- TTGAACTCGAATTCGGTTCCCTTCATCTCACCGAATAAAGGAGAGGTAAA
FD558301       <-- TTGAACTCGAATTCGGTTCCCTTCATCTCACCGAATAAAGGAGAGGTAAA
EW716784       <-- TTGAACTCGAATTCGGTTCCCTTCATCTCACCGAATAAAGGAGAGGTAAA
EX747790       <-- TTGAACTCGAATTCGGTTCCCTTCATCTCACCGAATAAAGGAGAGGTAAA
EW716345       <-- TTGAACTCGAATTCGGTTCCCTTCATCTCACCGAATAAAGGAGAGGTAAA
EY915805       <-- TTGAACTCGAATTCGGTTCCCTTCATCTCACCGAATAAAGGAGAGGTAAA
FD532266       <-- TTGAACTCGAATTCGGTTCCCTTCATCTCACCGAATAAAGGAGAGGTAAA
EX889041       <-- TTGAACTCGAATTCGGTTCCCTTCATCTCACCGAATAAAGGAGAGGTAAA
FD948767       <-- TTGAACTCGAATTCGGTTCCCTTCATCTCACCGAATAAAGGAGAGGTAAA
EX755882       <-- TTGAACTCGAATTCGGTTCCCTTCATCTCACCGAATAAAGGAGAGGTAAA
EX756423       <-- TTGAACTCGAATTCGGTTCCCTTCATCTCACCGAATAAAGGAGAGGTAAA
EX757162       <-- TTGAACTCGAATTCGGTTCCCTTCATCTCACCGAATAAAGGAGAGGTAAA
FD987785       <-- TTGAACTCGAATTCGGTTCCCTTCATCTCACCGAATAAAGGAGAGGTAAA
EV569297       <-- TTGAACTCGAATTCGGTTCCCTTCATCTCACCGAATAAAGGAGAGGTAAA
EX756112       <-- TTGAACTCGAATTCGGTTCCCTTCATCTCACCGAATAAAGGAGAGGTAAA
EY914466       <-- TTGAACTCGAATTCGGTTCCCTTCATCTCACCGAATAAAGGAGAGGTAAA
FD950142       <-- TTGAACTCGAATTCGGTTCCCTTCATCTCACCGAATAAAGGAGAGGTAAA
FD550785       <-- CTGAACTCGAATTCGGTTCCCTTCATCTCACCGAATAAAGGAGAGGTAAA
FD572238       <-- ..................................................
FD528791       --> ..................................................
EV531337       --> ..................................................
EW721115       --> ..................................................
EY910506       --> ..................................................
FD554228       --> ..................................................
FD984561       --> ..................................................
FD944506       --> ..................................................
FD983763       --> ..................................................
EV574385       --> ..................................................
FD952218       --> ..................................................
EX760236       --> TTGAACT...........................................
EX774578       --> TTGAACTC..........................................
EY911579       --> TTGAACTCGAATTCGGTTCCCTTCATCTCACCGAATAAAGGAGAGGTAAA
EV545428       --> ..................................................
EV573874       --> ..................................................
EX901779       --> ..................................................
AB447925       --> ..................................................

               901    -    951
UN20091        --> TCCTTTAGAGGTTGTGAAGTACAGCGATGTGATAAGCGTTGTATCATAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- ..................................................
FD956311       <-- ..................................................
EX897316       <-- ..................................................
EX770377       <-- ..................................................
EV550077       <-- ..................................................
EV536335       <-- TCCTTTAGAGGTTGTGAAGTACAGCGATGTGATAAGCGTTGTATCATAAG
EV569974       <-- TCCTTTAGAGGTTGTGAAGTACAGCGATGTGATAAGCATTGTATCATAAG
FD558301       <-- TCCTTTAGAGGTTGTGAAGTACAGCGATGTGATAAGCATTGTATCATAAG
EW716784       <-- TCCTTTAGAGGTTGTGAAGTACAGCGATGTGATAAGCGTTGTATCATAAG
EX747790       <-- TCCTTTAGAGGTTGTGAAGTACAGCGATGTGATAAGCGTTGTATCATAAG
EW716345       <-- TCCTTTAGAGGTTGTGAAGTACAGCGATGTGATAAGCGTTGTATCATAAG
EY915805       <-- TCCTTTAGAGGTTGTGAAGTACAGCGATGTGATAAGCGTTGTATCATAAG
FD532266       <-- TCCTTTAGAGGTTGTGAAGTACAGCGATGTGATAAGCGTTGTATCATAAG
EX889041       <-- TCCTTTAGAGGTTGTGAAGTACAGCGATGTGATAAGCGTTGTATCATAAG
FD948767       <-- TCCTTTAGAGGTTGTGAAGTACAGCGATGTGATAAGCGTTGTATCATAAG
EX755882       <-- TCCTTTAGAGGTTGTGAAGTACAGCGATGTGATAAGCGTTGTATCATAAG
EX756423       <-- TCCTTTAGAGGTTGTGAAGTACAGCGATGTGATAAGCGTTGTATCATAAG
EX757162       <-- TCCTTTAGAGGTTGTGAAGTACAGCGATGTGATAAGCGTTGTATCATAAG
FD987785       <-- TCCTTTAGAGGTTGTGAAGTACAGCGATGTGATAAGCATTGTATCATAAG
EV569297       <-- TCCTTTAGAGGTTGTGAAGTACAGCGATGTGATAAGCATTGTATCATAAG
EX756112       <-- TCCTTTAGAGGTTGTGAAGTACAGCGATGTGATAAGCGTTGTATCATAAG
EY914466       <-- TCCTTTAGAGGTTGTGAAGTACAGCGATGTGATAAGCGTTGTATCATAAG
FD950142       <-- TCCTTTAGAGGTTGTGAAGTACAGCGATGTGATAAGCGTTGTATCATAAG
FD550785       <-- TCCTTTAGAGGTTGTGAAGTACAGCGATGTGATAAGCGTTGTATCATAAG
FD572238       <-- ..................................................
FD528791       --> ..................................................
EV531337       --> ..................................................
EW721115       --> ..................................................
EY910506       --> ..................................................
FD554228       --> ..................................................
FD984561       --> ..................................................
FD944506       --> ..................................................
FD983763       --> ..................................................
EV574385       --> ..................................................
FD952218       --> ..................................................
EX760236       --> ..................................................
EX774578       --> ..................................................
EY911579       --> TCCTTTAGAGGTTGTGAAGTACAGCGATGTGATAAGCGTTGTATCATAAG
EV545428       --> ..................................................
EV573874       --> ..................................................
EX901779       --> ..................................................
AB447925       --> ..................................................

               951    -   1001
UN20091        --> AGTAAATATGCTTGTAGGTTCCACCAACGGCAGTGATACTATCTTTCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD956311       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX897316       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX770377       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV550077       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536335       <-- AGTAAATATGCTTGTAGGTTACACCAACGGCAGTGATACTATCTTTCGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569974       <-- AGTAAATATGCTTGTAGGTTCCACCAACGGCAGTGATACTATCTTTCGGA  Raphanus raphanistrum subsp. landra
FD558301       <-- AGTAAATATGCTTGTAGGTTCCACCAACGGCAGTGATACTATCTTTCGGA  Raphanus raphanistrum subsp. landra
EW716784       <-- AGTAAATATGCTTGTATGTTCCACCAACGGCAGTGATACTATCTTTCGGA  Raphanus sativus var. oleiformis
EX747790       <-- AGTAAATATGCTTGTATGTTCCACCAACGGCAGTGATACTATCTTTCGGA  Raphanus raphanistrum subsp. maritimus
EW716345       <-- AGTAAATATGCTTGTAGGTTCCACCAACGGCAGTGATACTATCTTTCGGA  Raphanus sativus var. oleiformis
EY915805       <-- AGTAAATATGCTTGTATGTTCCACCAACGGCAGTGATACTATCTTTCGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532266       <-- AGTAAATATGCTTGTATGTTCCACCAACGGCAGTGATACTATCTTTCGGA  Raphanus raphanistrum subsp. maritimus
EX889041       <-- AGTAAATATGCTTGTAGGTTCCACCAACGGCAGTGATACTATCTTTTGGA  Raphanus sativus var. oleiformis
FD948767       <-- AGTAAATATGCTTGTAGGTTCCACCAACGGCAGTGATACTATCTTTTGGA  Raphanus sativus cv Early Scarlet Globe
EX755882       <-- AGTAAATATGCTTGTAGGTTCCACCAACGGCAGTGATACTATCTTTCGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756423       <-- AGAAAATATGCTTGTAGGTTCCACCAACGGCAGTGATACTATCTTTCGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757162       <-- AGAAAATATGCTTGTAGGTTCCACCAACGGCAGTGATACTATCTTTCGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD987785       <-- AGTAAATATGCTTGTAGGTTCCACCAACGGCAGTGATACTATCTTTCGGA  Raphanus raphanistrum subsp. landra
EV569297       <-- AGTAAATATGCTTGTAGGTTCCACCAACGGCAGTGATACTATCTTTCGGA  Raphanus raphanistrum subsp. landra
EX756112       <-- AGAAAATATGCTTGTAGGTTCCACCAACGGCAGTGATACTATCTTTCGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914466       <-- AGTAAATATGCTTGTATGTTCCACCAACGGCAGTGATACTATCTTTCGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950142       <-- AGTAAATATGCTTGTAGGTTCCACCAACGGCAGTGATACTATCTTTTGGA  Raphanus sativus cv Early Scarlet Globe
FD550785       <-- AGTAAATATGCTTGTATGTTCCACCAACGGCAGTGATACTATCTTTCGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572238       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD528791       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV531337       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW721115       --> ..................................................  Raphanus sativus var. oleiformis
EY910506       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554228       --> ..................................................  Raphanus raphanistrum subsp. landra
FD984561       --> ..................................................  Raphanus raphanistrum subsp. landra
FD944506       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD983763       --> ..................................................  Raphanus raphanistrum subsp. landra
EV574385       --> ..................................................  Raphanus raphanistrum subsp. landra
FD952218       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX760236       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774578       --> ..................................................  Raphanus raphanistrum subsp. landra
EY911579       --> AGTAAATATG........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545428       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573874       --> ..................................................  Raphanus raphanistrum subsp. landra
EX901779       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
AB447925       --> ..................................................  Raphanus sativus cv Sakurajima Daikon var. niger

               1001   -   1051
UN20091        --> TAATCCACTGAAAACTCTTTTAGTTCGCCACGAGCCGCTCCATGCTCACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- ..................................................
FD956311       <-- ..................................................
EX897316       <-- ..................................................
EX770377       <-- ..................................................
EV550077       <-- ..................................................
EV536335       <-- TAATCCACTGAAAACTCTTTTAGTTCGCCACGAGCCGCTCCATGCTCACG
EV569974       <-- TAATCCACTGAAAACTCTTTTAGTTCGCCACGAGCCGCTCCATGCTCACG
FD558301       <-- TAATCCACTGAAAACTCTTTTAGTTCGCCACGAGCCGCTCCATGCTCACG
EW716784       <-- TAATCCACTGAAAACTCTTTTAGTTCGCCACGAGCCGCTCCATGCTCACG
EX747790       <-- TAATCCACTGAAAACTCTTTTAGTTCGCCACGAGCCGCTCCATGCTCACG
EW716345       <-- TAATCCACTGAAAACTCTTTTAGTTCGCCACGAGCCGCTCCATGCTCACG
EY915805       <-- TAATCCACTGAAAACTCTTTTAGTTCGCCACGAGCCGCTCCATGCTCACG
FD532266       <-- TAATCCACTGAAAACTCTTTTAGTTCGCCACGAGCCGCTCCATGCTCACG
EX889041       <-- TAATCCACTGAAAACTCTTTTAGTTCGCCACGAGCCGCTCCATGCTCACG
FD948767       <-- TAATCCACTGAAAACTCTTTTAGTTCGCCACGAGCCGCTCCATGCTCACG
EX755882       <-- TAATCCACTGAAAACTCTTTTAGTTCGCCACGAGCCGCTCCATGCTCACG
EX756423       <-- TAATCCACTGAAAACTCTTTTAGTTCGCCACGAGCCGCTCCATGCTCACG
EX757162       <-- TAATCCACTGAAAACTCTTTTAGTTCGCCACGAGCCGCTCCATGCTCACG
FD987785       <-- TAATCCACTGAAAACTCTTTTAGTTCGCCACGAGCCGCTCCATGCTCACG
EV569297       <-- TAATCCACTGAAAACTCTTTTAGTTCGCCACGAGCCGCTCCATGCTCACG
EX756112       <-- TAATCCACTGAAAACTCTTTTAGTTCGCCACGAGCCGCTCCATGCTCACG
EY914466       <-- TAATCCACTGAAAACTCTTTTAGTTCGCCACGAGCCGCTCCATGCTCACG
FD950142       <-- TAATCCACTGAAAACTCTTTTAGTTCGCCACGAGCCGCTCCATGCTCACG
FD550785       <-- TAATCCACTGAAAACTCTTTTAGTTCGCCACGAGCCGCTCCATGCTCACG
FD572238       <-- ..................................................
FD528791       --> ..................................................
EV531337       --> ..................................................
EW721115       --> ..................................................
EY910506       --> ..................................................
FD554228       --> ..................................................
FD984561       --> ..................................................
FD944506       --> ..................................................
FD983763       --> ..................................................
EV574385       --> ..................................................
FD952218       --> ..................................................
EX760236       --> ..................................................
EX774578       --> ..................................................
EY911579       --> ..................................................
EV545428       --> ..................................................
EV573874       --> ..................................................
EX901779       --> ..................................................
AB447925       --> ..................................................

               1051   -   1101
UN20091        --> GATGTCGACTTTTCCGTTCTTTACGTATTCGATCTTGATATAAGTTATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD956311       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX897316       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX770377       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV550077       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536335       <-- GATCTCGACTTTTCCGTTCTTTACGTATTCGATCTTGATATAAGTTATGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569974       <-- GATGTCGACTTTTCCGTTCTTTACGTATTCGATCTTGATATAAGTTATGT  Raphanus raphanistrum subsp. landra
FD558301       <-- GATGTCGACTTTTCCGTTCTTTACGTATTCGATCTTGATATAAGTTATGT  Raphanus raphanistrum subsp. landra
EW716784       <-- GATGTCGACTTTTCCGTTCTTTACGTATTCGATCTTGATATAAGTTATGT  Raphanus sativus var. oleiformis
EX747790       <-- GATGTCGACTTTTCCGTTCTTTACGTATTCGATCTTGATATAAGTTATGT  Raphanus raphanistrum subsp. maritimus
EW716345       <-- GATCTCGACTTTTCCGTTCTTTACGTATTCGATCTTGATATAAGTTATGT  Raphanus sativus var. oleiformis
EY915805       <-- GATGTCGACTTTTCCGTTCTTTACGTATTCGATCTTGATATAAGTTATGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532266       <-- GATGTCGACTTTTCCGTTCTTTACGTATTCGATCTTGATATAAGTTATGT  Raphanus raphanistrum subsp. maritimus
EX889041       <-- GATGTCGACTTTTCCGTTCTTTACGTAATCGATCTTGATATAAGTTATGT  Raphanus sativus var. oleiformis
FD948767       <-- GATGTCGACTTTTCCGTTCTTTACGTAATCGATCTTGATATAAGTTATGT  Raphanus sativus cv Early Scarlet Globe
EX755882       <-- GATCTCGACTTTTCCGTTCTTTACGTATTCGATCTTGATATAAGTTATGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756423       <-- GGTCTCGACTTTTCCGTTCTTTACGTATTCGATCTTGATATAAGTTATGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757162       <-- GGTCTCGACTTTTCCGTTCTTTACGTATTCGATCTTGATATAAGTTATGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD987785       <-- GATGTCGACTTTTCCGTTCTTTACGTATTCGATCTTGATATAAGTTATGT  Raphanus raphanistrum subsp. landra
EV569297       <-- GATGTCGACTTTTCCGTTCTTTACGTATTCGATCTTGATATAAGTTATGT  Raphanus raphanistrum subsp. landra
EX756112       <-- GGTCTCGACTTTTCCGTTCTTTACGTATTCGATCTTGATATAAGTTATGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914466       <-- GATGTCGACTTTTCCGTTCTTTACGTATTCGATCTTGATATAAGTTATGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950142       <-- GATGTCGACTTTTCCGTTCTTTACGTAATCGATCTTGATATAAGTTATGT  Raphanus sativus cv Early Scarlet Globe
FD550785       <-- GATGTCGACTTTTCCGTTCTTTACGTATTCGATCTTGATATAAGTTATGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572238       <-- ..................................TTGATATAAGTTATGT  Raphanus sativus cv Early Scarlet Globe
FD528791       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV531337       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW721115       --> ..................................................  Raphanus sativus var. oleiformis
EY910506       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554228       --> ..................................................  Raphanus raphanistrum subsp. landra
FD984561       --> ..................................................  Raphanus raphanistrum subsp. landra
FD944506       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD983763       --> ..................................................  Raphanus raphanistrum subsp. landra
EV574385       --> ..................................................  Raphanus raphanistrum subsp. landra
FD952218       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX760236       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774578       --> ..................................................  Raphanus raphanistrum subsp. landra
EY911579       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545428       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573874       --> ..................................................  Raphanus raphanistrum subsp. landra
EX901779       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
AB447925       --> ..................................................  Raphanus sativus cv Sakurajima Daikon var. niger

               1101   -   1151
UN20091        --> TTACATCATCGGCTCCCACAGTTATTTTCTTCACACCTTCAAAACCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- ..................................................
FD956311       <-- ..................................................
EX897316       <-- ..................................................
EX770377       <-- ..................................................
EV550077       <-- ..................................................
EV536335       <-- TTACATCATCGGCTCCCc................................
EV569974       <-- TTACATCATCGGCTCCCACAGTTATTTTCTTCACACCTTCAAAACCAACA
FD558301       <-- TTACATCATCGGCTCCCACAGTTATTTTCTTCACACCTTCAAAACCAACA
EW716784       <-- TTACATCATCGGCTCCCACAGTTATTTTCTTCACACCTTCAAAACCAACA
EX747790       <-- TTACATCATCGGCTCCCACAGTTATTTTCTTCACACCTTCAAAACCAACA
EW716345       <-- TTACATCATCGGCTCCCACAGTTATTTTCTTCACACCTTCAAAACCAACA
EY915805       <-- TTACATCATCGGCTCCCACAGTTATTTTCTTCACACCTTCAAAACCAACA
FD532266       <-- TTACATCATCGGCTCCCACAGTTATTTTCTTCACACCTTCAAAACCAACA
EX889041       <-- TTACATCATCGGCTCCCACAGTTATTTTCTTCACACCTTCAAAACCAACA
FD948767       <-- TTACATCATCGGCTCCCACAGTTATTTTCTTCACACCTTCAAAACCAACA
EX755882       <-- TTACATCATCGGCTCCCACAGTTATTTTCTTCACACCTTCAAAACCAACA
EX756423       <-- TTACATCATCGGCTCCCACAGTTATTTTCTTCACACCTTCAAAACCAACA
EX757162       <-- TTACATCATCGGCTCCCACAGTTATTTTCTTCACACCTTCAAAACCAACA
FD987785       <-- TTACATCATCGGCTCCCACAGTTATTTTCTTCACACCTTCAAAACCAACA
EV569297       <-- TTACATCATCGGCTCCCACAGTTATTTTCTTCACACCTTCAAAACCAACA
EX756112       <-- TTACATCATCGGCTCCCACAGTTATTTTCTTCACACCTTCAAAACCAACA
EY914466       <-- TTACATCATCGGCTCCCACAGTTATTTTCTTCACACCTTCAAAACCAACA
FD950142       <-- TTACATCATCGGCTCCCACAGTTATTTTCTTCACACCTTCAAAACCAACA
FD550785       <-- TTACATCATCGGCTCCCACAGTTATTTTCTTCACACCTTCAAAACCAACA
FD572238       <-- TTACATCATCGGCTCCCACAGTTATTTTCTTCACACCTTCAAAACCAACA
FD528791       --> ..................................................
EV531337       --> ..................................................
EW721115       --> ..................................................
EY910506       --> ..................................................
FD554228       --> ..................................................
FD984561       --> ..................................................
FD944506       --> ..................................................
FD983763       --> ..................................................
EV574385       --> ..................................................
FD952218       --> ..................................................
EX760236       --> ..................................................
EX774578       --> ..................................................
EY911579       --> ..................................................
EV545428       --> ..................................................
EV573874       --> ..................................................
EX901779       --> ..................................................
AB447925       --> ..................................................

               1151   -   1201
UN20091        --> TCGTTGAATCCTTGTCCTTTGTTACCACCAAGCGGTTCCATCGTGGCCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD956311       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX897316       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX770377       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV550077       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536335       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569974       <-- TCGTTGAATCCTTGTCCTTTGTTACCACCAAGCGGTTCCATGGTGGCCGT  Raphanus raphanistrum subsp. landra
FD558301       <-- TCGTTGAATCCTTGTCCTTTGTTACCACCAAGCGGTTCCATGGTGGCCGT  Raphanus raphanistrum subsp. landra
EW716784       <-- TCGTTGAATCCTTGTCCTTTGTTACCACCAAGCGGTTCCATCATAGCCGT  Raphanus sativus var. oleiformis
EX747790       <-- TCGTTGAATCCTTGTCCTTTGTTACCACCAAGCGGTTCCATCATAGCCGT  Raphanus raphanistrum subsp. maritimus
EW716345       <-- TCGTTGAATCCTTGTCCTTTGTTACCACCAAGCGGTTCCATCGTGGCCGT  Raphanus sativus var. oleiformis
EY915805       <-- TCGTTGAATCCTTGTCCTTTGTTACCACCAAGCGGTTCCATCGTGGCCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532266       <-- TCGTTGAATCCTTGTCCTTTGTTACCACCAAGCGGTTCCATCGTGGCCGT  Raphanus raphanistrum subsp. maritimus
EX889041       <-- TCGT-GAATCCTTGTCCTTTGTTACCACCAAGCGGTTCCATCATAGCCGT  Raphanus sativus var. oleiformis
FD948767       <-- TCGTTGAATCCTTGTCCTTTGTTACCACCAAGCGGTTCCATCATAGCCGT  Raphanus sativus cv Early Scarlet Globe
EX755882       <-- TCGTTGAATCCTTGTCCTTTGTTACCACCAAGCGGTTCCATCGTGGCCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756423       <-- TCGTTGAATCCTTGTCCTTTGTTACCACCAAGCGGTTCCATCGTAGCCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757162       <-- TCGTTGAATCCTTGTCCTTTGTTACCACCAAGCGGTTCCATCGTAGCCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD987785       <-- TCGTTGAATCCTTGTCCTTTGTTACCACCAAGCGGTTCCATGGTGGCCGT  Raphanus raphanistrum subsp. landra
EV569297       <-- TCGTTGAATCCTTGTCCTTTGTTACCACCAAGCGGTTCCATGGTGGCCGT  Raphanus raphanistrum subsp. landra
EX756112       <-- TCGTTGAATCCTTGTCCTTTGTTACCACCAAGCGGTTCCATCGTGGCCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914466       <-- TCGTTGAATCCTTGTCCTTTGTTACCACCAAGCGGTTCCATCGTGGCCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950142       <-- TCGTTGAATCCTTGTCCTTTGTTACCACCAAGCGGTTCCATCATAGCCGT  Raphanus sativus cv Early Scarlet Globe
FD550785       <-- TCGTTGAATCCTTGTCCTTTGTTACCACCAAGCGGTTCCATCGTGGCCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572238       <-- TCGTTGAATCCTTGTCCTTTGTTACCACCAAGCGGTTCCATCATAGCCGT  Raphanus sativus cv Early Scarlet Globe
FD528791       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV531337       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW721115       --> ..................................................  Raphanus sativus var. oleiformis
EY910506       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554228       --> ..................................................  Raphanus raphanistrum subsp. landra
FD984561       --> ..................................................  Raphanus raphanistrum subsp. landra
FD944506       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD983763       --> ..................................................  Raphanus raphanistrum subsp. landra
EV574385       --> ..................................................  Raphanus raphanistrum subsp. landra
FD952218       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX760236       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774578       --> ..................................................  Raphanus raphanistrum subsp. landra
EY911579       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545428       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573874       --> ..................................................  Raphanus raphanistrum subsp. landra
EX901779       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
AB447925       --> ..................................................  Raphanus sativus cv Sakurajima Daikon var. niger

               1201   -   1251
UN20091        --> TCAAATCCGTCAGATATCTCCTGACTGAAAGATGATGGGGGAGAAGAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV526993       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD956311       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX897316       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX770377       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV550077       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536335       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569974       <-- TCAAATCCGTCAGATATCTCCTGACTGAAAGATGATGGGGGAGAAGAGTG  Raphanus raphanistrum subsp. landra
FD558301       <-- TCAAATCCGTCAGATATCTCC.............................  Raphanus raphanistrum subsp. landra
EW716784       <-- TCAAATCCGTCAGATATCTACTGACTGAAAGATGATGGGGGAGAAGAGTG  Raphanus sativus var. oleiformis
EX747790       <-- TCAAATCCGTCAGATAT---CTGACTGAAAGATGATGGGGGAGAAGAGTG  Raphanus raphanistrum subsp. maritimus
EW716345       <-- TCAAATCCGTCAGATATCTCCTGACTGAAAGATGATGGGGGA--GGAGTG  Raphanus sativus var. oleiformis
EY915805       <-- TCAAATCCGTCAGATATCTCCTGACTGAAAGATGATGGAGGAGAAGAGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532266       <-- TCAAATCCGTCAGATATCTCCTGACTGAAAGATGATGGAGGAGAAGAGTG  Raphanus raphanistrum subsp. maritimus
EX889041       <-- TCAAATCCGTCAGATATCTCCTGACTGAAAGATGATGGGGGAGAAGAGTG  Raphanus sativus var. oleiformis
FD948767       <-- TCAAATCCGTCAGATATCTCCTGACTGAAAGATGATGGGGGAGAAGAGTG  Raphanus sativus cv Early Scarlet Globe
EX755882       <-- TCAAATCCGTCAGATATCTCCTGACTGAAAGATGATGGGGG-GAAGAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756423       <-- TCAAATCCGTCAGATATCTCCTGACTGAAAGATGATGGGGG-GAAGAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757162       <-- TCAAATCCGTCAGATATCTCCTGA-TGAAAGATGATGGGGG-GAAGAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD987785       <-- TCAAATCCGTCAGATATCTCCTGACTGAAAGATGATGGGGGAGAAGAGTG  Raphanus raphanistrum subsp. landra
EV569297       <-- TCAAATCCGTCAGATATCTCCTGACTGAAAGATGATGGGGGAGAAGAGTG  Raphanus raphanistrum subsp. landra
EX756112       <-- TCAAATCCGTCAGATATCTCCTGACTGAAAGATGATGGGGG-GAAGAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914466       <-- TCAAATCCGTCAGATATCTCCTGACTGAAAGATGATGGAGGAGAAGAGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950142       <-- TCAAATCCGTCAGATATCTCCTGACTGAAAGATGATGGGGGAGAAGAGTG  Raphanus sativus cv Early Scarlet Globe
FD550785       <-- TCAAGTCCGTCAGATATCTCCTGACTGAAAGATGATGGAGGAGAAGAGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572238       <-- TCAAATCCGTCAGATATCTCCTGACTGAAAGATGATGGGGGAGAAGAGTG  Raphanus sativus cv Early Scarlet Globe
FD528791       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV531337       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW721115       --> ..................................................  Raphanus sativus var. oleiformis
EY910506       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD554228       --> ..................................................  Raphanus raphanistrum subsp. landra
FD984561       --> ..................................................  Raphanus raphanistrum subsp. landra
FD944506       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD983763       --> ..................................................  Raphanus raphanistrum subsp. landra
EV574385       --> ..................................................  Raphanus raphanistrum subsp. landra
FD952218       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX760236       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774578       --> ..................................................  Raphanus raphanistrum subsp. landra
EY911579       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545428       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573874       --> ..................................................  Raphanus raphanistrum subsp. landra
EX901779       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
AB447925       --> ..................................................  Raphanus sativus cv Sakurajima Daikon var. niger

               1251   -   1301
UN20091        --> AATCGCAATCC
                   ~~~~~~~~~~~
EV526993       <-- ...........
FD956311       <-- ...........
EX897316       <-- ...........
EX770377       <-- ...........
EV550077       <-- ...........
EV536335       <-- ...........
EV569974       <-- AATCGCAATCC
FD558301       <-- ...........
EW716784       <-- AATCGCAATC.
EX747790       <-- AATCGCcc...
EW716345       <-- AATCGCAATCC
EY915805       <-- AATCGCcc...
FD532266       <-- AATCGCAATCC
EX889041       <-- AATCGCAATCC
FD948767       <-- AATCGCcc...
EX755882       <-- AATCGCcc...
EX756423       <-- AATCGCcc...
EX757162       <-- AATCGCAATCC
FD987785       <-- GATCGCAATCC
EV569297       <-- AATCGCAATCC
EX756112       <-- AATCGCAATC.
EY914466       <-- AATCGCAATCC
FD950142       <-- AATCGCAATCC
FD550785       <-- AATCGCAATCC
FD572238       <-- AATCGCcc...
FD528791       --> ...........
EV531337       --> ...........
EW721115       --> ...........
EY910506       --> ...........
FD554228       --> ...........
FD984561       --> ...........
FD944506       --> ...........
FD983763       --> ...........
EV574385       --> ...........
FD952218       --> ...........
EX760236       --> ...........
EX774578       --> ...........
EY911579       --> ...........
EV545428       --> ...........
EV573874       --> ...........
EX901779       --> ...........
AB447925       --> ...........