1      -     51
UN20095        --> AGGGCCGGCAAGGTAGAGAGAGAGAGTGAGAGACGACACCATGGTTAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571612       <-- .GGGCCGGCAAGGTAGAGAGAGAGAGTGAGAGACGACACCATGGTTAAGT  Raphanus raphanistrum subsp. landra
FD531768       <-- .GGGCCGGCAAGGTAGAGAGAGAGAGTGAGAGACGACACCATGGTTAAGT  Raphanus raphanistrum subsp. maritimus
EX777599       <-- .......ggAAGGTAGAGAGAGAGAGTGAGAGACGACACCATGGTTAAGT  Raphanus raphanistrum subsp. landra
EY894813       <-- .......ggAAGGTAGAGAGAGAAAGTGAGAGACGACACCATGGTTAAGT  Raphanus raphanistrum subsp. maritimus
EY909936       <-- ............ggAGAGAGAGAGAGAGAGAGACGACGCCATGGTTAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD581635       <-- ........ggggcaaggtAGAGAGAGAGAGAGACGACGCCATGGTTAAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD583308       <-- .........gggcaaggtAGAGAGAGAGAGAGACGACGCCATGGTTAAGT  Raphanus sativus cv Rat-Tail Radish #3870
FY440258       <-- .....................................gCCATGGTTAAGT  Raphanus sativus cv GSK3-1
FY445551       <-- .....................................gCCATGGTTAAGT  Raphanus sativus cv GSK3-1
FY441355       <-- ..........................................GGTTAAGT  Raphanus sativus cv GSK3-1
FY436898       <-- ..................................................  Raphanus sativus cv GSK3-1
EY896396       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW719944       <-- ..................................................  Raphanus sativus var. oleiformis
FD935095       <-- ..................................................  Raphanus sativus var. oleiformis
EX749728       --> AGGGCCGGCAAGGTAGAGAGAGAGAGTGAGAGACGACACCATGGTTAAGT  Raphanus raphanistrum subsp. maritimus
EV566492       --> .GGGCCGGCAAGGTAGAGAGAGAGAGTGAGAGACGACACCATGGTTAAGT  Raphanus raphanistrum subsp. landra
FD536265       --> .GGGCCGGCAAGGTAGAGAGAGAGAGTGAGAGACGACACCATGGTTAAGT  Raphanus raphanistrum subsp. maritimus
FD989386       --> .GGGCCGGCAAGGTAGAGAGAGAG--TGAGAGACGACACCATGGTTAAGT  Raphanus raphanistrum subsp. landra
EW715311       --> .......ggAAGGTAGAGAGAGAGAG--AGAGACGACGCCATGGTTAAGT  Raphanus sativus var. oleiformis
EX773781       --> .......ggAAGGTAGAGAGAGAGAGTGAGAGACGACACCATGGTTAAGT  Raphanus raphanistrum subsp. landra
EY898885       --> .......ggAAGGTAGAGAGAGAAAGTGAGAGACGACACCATGGTTAAGT  Raphanus raphanistrum subsp. maritimus
FD532470       --> .......ggAAGGTAGAGAGAGAGAGTGAGAGACGACACCATGGTTAAGT  Raphanus raphanistrum subsp. maritimus
EY913754       --> ............ggAGAGAGAGAGAGAGAGAGACGACGCCATGGTTAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897295       --> ...........ggaaggtAGAGAGAGAGAGAGACGACGCCATGGTTAAGT  Raphanus raphanistrum subsp. maritimus
FD577309       --> ........ggggcaaggtAGAGAGAGAGAGAGACGACGCCATGGTTAAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD579298       --> .........gggcaaggtAGAGAGAGAGAGAGACGACGCCATGGTTAAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD938826       --> .......gggggcaaggtAGAGAGAGAGAGAGACTACGCCATGGTTAAGT  Raphanus sativus var. oleiformis
EY900981       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               51     -    101
UN20095        --> TTCTGAAGCAGAACAAAGCTGTGATCCTCCTCCAAGGTCGTTATGCCGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571612       <-- TTCTGAAGCAGAACAAAGCTGTGATCCTCCTCCAAGGTCGTTATGCCGGC  Raphanus raphanistrum subsp. landra
FD531768       <-- TTCTGAAGCAGAACAAAGCTGTGATCCTCCTCCAAGGTCGTTATGCCGGC  Raphanus raphanistrum subsp. maritimus
EX777599       <-- TTCTGAAGCAGAACAAAGCTGTGATCCTCCTCCAAGGTCGTTATGCCGGC  Raphanus raphanistrum subsp. landra
EY894813       <-- TTCTGAAGCAGAGCAAAGCTGTGATTCTCCTCCAAGGTCGTTATGCCGGC  Raphanus raphanistrum subsp. maritimus
EY909936       <-- TTCTGAAGCAGAACAAAGCTGTGATCCTCCTCCAAGGTCGTTACGCCGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD581635       <-- TTCTGAAGCAGAACAAAGCTGTGATCCTCCTCCAAGGTCGTTACGCCGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD583308       <-- TTCTGAAGCAGAACAAAGCTGTGATCCTCCTCCAAGGTCGTTACGCCGGC  Raphanus sativus cv Rat-Tail Radish #3870
FY440258       <-- TTCTGAAGCAGAACAAAGCTGTGATCCTCCTCCAAGGTCGTTATGCCGGC  Raphanus sativus cv GSK3-1
FY445551       <-- TTCTGAAGCAGAACAAAGCTGTGATCCTCCTCCAAGGTCGTTATGCCGGC  Raphanus sativus cv GSK3-1
FY441355       <-- TTCTGAAGCAGAACAAAGCTGTGATCCTCCTCCAAGGTCGTTATGCCGGC  Raphanus sativus cv GSK3-1
FY436898       <-- ..................................................  Raphanus sativus cv GSK3-1
EY896396       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW719944       <-- ..................................................  Raphanus sativus var. oleiformis
FD935095       <-- ..................................................  Raphanus sativus var. oleiformis
EX749728       --> TTCTGAAGCAGAACAAAGCTGTGATCCTCCTCCAAGGTCGTTATGCCGGC  Raphanus raphanistrum subsp. maritimus
EV566492       --> TTCTGAAGCAGAACAAAGCTGTGATCCTCCTCCAAGGTCGTTATGCCGGC  Raphanus raphanistrum subsp. landra
FD536265       --> TTCTGAAGCAGAACAAAGCTGTGATCCTCCTCCAAGGTCGTTATGCCGGC  Raphanus raphanistrum subsp. maritimus
FD989386       --> TTCTGAAGCAGAACAAAGCTGTGATCCTCCTCCAAGGTCGTTATGCCGGC  Raphanus raphanistrum subsp. landra
EW715311       --> TTCTGAAGCAGAACAAAGCTGTGATCCTCCTCCAAGGTCGTTACGCCGGC  Raphanus sativus var. oleiformis
EX773781       --> TTCTGAAGCAGAACAAAGCTGTGATCCTCCTCCAAGGTCGTTATGCCGGC  Raphanus raphanistrum subsp. landra
EY898885       --> TTCTGAAGCAGAGCAAAGCTGTGATTCTCCTCCAAGGTCGTTATGCCGGC  Raphanus raphanistrum subsp. maritimus
FD532470       --> TTCTGAAGCAGAACAAAGCTGTGATCCTCCTCCAAGGTCGTAATGCCGGC  Raphanus raphanistrum subsp. maritimus
EY913754       --> TTCTGAAGCAGAACAAAGCTGTGATCCTCCTCCAAGGTCGTTACGCCGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897295       --> TTCTGAAGCAGAACAAAGCTGTGATCCTCCTCCAAGGTCGTTACGCCGGC  Raphanus raphanistrum subsp. maritimus
FD577309       --> TTCTGAAGCAGAACAAAGCTGTGATCCTCCTCCAAGGTCGTTACGCCGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD579298       --> TTCTGAAGCAGAACAAAGCTGTGATCCTCCTCCAAGGTCGTTACGCCGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD938826       --> TTCTGAAGCAGAACAAAGCTGTGATCCTCCTCCAAGGTCGTTACGCCGGC  Raphanus sativus var. oleiformis
EY900981       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               101    -    151
UN20095        --> AAGAAGGCAGTGATCATCCGTTCATTCGACGACGGCAACCGCGAGCGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571612       <-- AAGAAGGCAGTGATCATCCGTTCATTCGACGACGGCAACCTCGAGCGTCC  Raphanus raphanistrum subsp. landra
FD531768       <-- AAGAAGGCAGTGATCATCCGTTCATTCGACGACGGCAACCGCGAGCGTCC  Raphanus raphanistrum subsp. maritimus
EX777599       <-- AAGAAGGCAGTGATCATCCGTTCATTCGACGACGGCAACCGCGAGCGTCC  Raphanus raphanistrum subsp. landra
EY894813       <-- AAGAAGGCAGTGATCATCCGTTCATTCGACGACGGCAACCGCGAGCGTCC  Raphanus raphanistrum subsp. maritimus
EY909936       <-- AAGAGGGCAGTGATCATCCGTTCCTTCGACGACGGCAACCGCGAGCGTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD581635       <-- AAGAAGGCAGTGATCATCCGTTCCTTCGACGACGGCAACCGCGAGCGTCC  Raphanus sativus cv Rat-Tail Radish #3870
FD583308       <-- AAGAAGGCAGTGATCATCCGTTCCTTCGACGACGGCAACCGCGAGCGTCC  Raphanus sativus cv Rat-Tail Radish #3870
FY440258       <-- AAGAAGGCAGTGATCATCCGTTCATTCGACGACGGCAACCGCGAGCGTCC  Raphanus sativus cv GSK3-1
FY445551       <-- AAGAAGGCAGTGATCATCCGTTCATTCGACGACGGCAACCGCGAGCGTCC  Raphanus sativus cv GSK3-1
FY441355       <-- AAGAAGGCAGTGATCATCCGTTCATTCGACGACGGCAACCGCGAGCGTCC  Raphanus sativus cv GSK3-1
FY436898       <-- ...................GTTCATTCGACGACGGCAACCGCGAGCGTCC  Raphanus sativus cv GSK3-1
EY896396       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW719944       <-- ..................................................  Raphanus sativus var. oleiformis
FD935095       <-- ..................................................  Raphanus sativus var. oleiformis
EX749728       --> AAGAAGGCAGTGATCATCCGTTCATTCGACGACGGCAACCGCGAGCGTCC  Raphanus raphanistrum subsp. maritimus
EV566492       --> AAGAAGGCAGTGATCATCCGTTCATTCGACGACGGCAACCTCGAGCGTCC  Raphanus raphanistrum subsp. landra
FD536265       --> AAGAAGGCAGTGATCATCCGTTCATTCGACGACGGCAACCGCGAGCGTCC  Raphanus raphanistrum subsp. maritimus
FD989386       --> AAGAAGGCAGTGATCATCCGTTCATTCGACGACGGCAACCGCGAGCGTCC  Raphanus raphanistrum subsp. landra
EW715311       --> AAGAAGGCAGTGATCATCCGTTCCTTCGACGACGGCAACCGCGAGCGTCC  Raphanus sativus var. oleiformis
EX773781       --> AAGAAGGCAGTGATCATCCGTTCATTCGACGACGGCAACCGCGAGCGTCC  Raphanus raphanistrum subsp. landra
EY898885       --> AAGAAGGCAGTGATCATCCGTTCATTCGACGACGGCAACCGCGAGCGTCC  Raphanus raphanistrum subsp. maritimus
FD532470       --> AAGAAGGCAGTGATCATCTGTTCATTCGACGACGGCAACCGCGAGCGTCC  Raphanus raphanistrum subsp. maritimus
EY913754       --> AAGAGGGCAGTGATCATCCGTTCCTTCGACGACGGCAACCGCGAGCGTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897295       --> AAGAAGGCAGTGATCATCCGTTCCTTCGACGACGGCAACCGCGAGCGTCC  Raphanus raphanistrum subsp. maritimus
FD577309       --> AAGAAGGCAGTGATCATCCGTTCCTTCGACGACGGCAACCGCGAGCGTCC  Raphanus sativus cv Rat-Tail Radish #3870
FD579298       --> AAGAAGGCAGTGATCATCCGTTCCTTCGACGACGGCAACCGCGAGCGTCC  Raphanus sativus cv Rat-Tail Radish #3870
FD938826       --> AAGAAGGCAGTGATCATCCGTTCCTTCGACGACGGCAACCGCGAGCGTCC  Raphanus sativus var. oleiformis
EY900981       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               151    -    201
UN20095        --> CTACGGACACTGTCTCGTCGCCGGGCTCAAGAAGTATCCGAGCAAGGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571612       <-- CTACGGACACTGTCTCGTCGCCGGGCTCAAGAAGTATCCGAGCAAGGTCA  Raphanus raphanistrum subsp. landra
FD531768       <-- CTACGGACACTGTCTCGTCGCCGGGCTCAAGAAGTATCCGAGCAAGGTCA  Raphanus raphanistrum subsp. maritimus
EX777599       <-- CTACGGACACTGTCTCGTCGCCGGGCTCAAGAAGTATCCGAGCAAGGTCA  Raphanus raphanistrum subsp. landra
EY894813       <-- CTACGGACACTGTCTCGTCGCCGGGCTCAAGAAGTATCCGAGCAAGGTCA  Raphanus raphanistrum subsp. maritimus
EY909936       <-- CTACGGACACTGTCTCGTCGCCGGGCTCAAGAAGTATCCGAGCAAGCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD581635       <-- CTACGGACACTGTCTCGTCGCCGGGCTCAAGAAGTATCCGAGCAAGCTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD583308       <-- CTACGGACACTGTCTCGTCGCCGGGCTCAAGAAGTATCCGAGCAAGCTCA  Raphanus sativus cv Rat-Tail Radish #3870
FY440258       <-- CTACGGACACTGTCTCGTCGCCGGGCTCAAGAAGTATCCGAGCAAGGTCA  Raphanus sativus cv GSK3-1
FY445551       <-- CTACGGACACTGTCTCGTCGCCGGGCTCAAGAAGTATCCGAGCAAGGTCA  Raphanus sativus cv GSK3-1
FY441355       <-- CTACGGACACTGTCTCGTCGCCGGGCTCAAGAAGTATCCGAGCAAGGTCA  Raphanus sativus cv GSK3-1
FY436898       <-- CTACGGACACTGTCTCGTCGCCGGGCTCAAGAAGTATCCGAGCAAGGTCA  Raphanus sativus cv GSK3-1
EY896396       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW719944       <-- ..................................................  Raphanus sativus var. oleiformis
FD935095       <-- ..................................................  Raphanus sativus var. oleiformis
EX749728       --> CTACGGACACTGTCTCGTCACCGGGCTCAAGAAGTATCCGAGCAAGGTCA  Raphanus raphanistrum subsp. maritimus
EV566492       --> CTACGGACACTGTCTCGTCGCCGGGCTCAAGAAGTATCCGAGCAAGGTCA  Raphanus raphanistrum subsp. landra
FD536265       --> CTACGGACACTGTCTCGTCGCCGGGCTCAAGAAGTATCCGAGCAAGGTCA  Raphanus raphanistrum subsp. maritimus
FD989386       --> CTACGGACACTGTCTCGTCGCCGAGCTCAAGAAGTATCCGAGCAAGGTCA  Raphanus raphanistrum subsp. landra
EW715311       --> CTACGGACACTGTCTCGTCGCCGGGCTCAAGAAGTATCCGAGCAAGCTCA  Raphanus sativus var. oleiformis
EX773781       --> CTACGGACACTGTCTCGTCGCCGGGCTCAAGAAGTATCCGAGCAAGGTCA  Raphanus raphanistrum subsp. landra
EY898885       --> CTACGGACACTGTCTCGTCGCCGGGCTCAAGAAGTATCCGAGCAAGGTCA  Raphanus raphanistrum subsp. maritimus
FD532470       --> CTACGGACACTGTCTCGTCGCCGGGCTCAAGAAGTATCCGAGCAAGGTCA  Raphanus raphanistrum subsp. maritimus
EY913754       --> CTACGGACACTGTCTCGTCGCCGGGCTCAAGAAGTATCCGAGCAAGCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897295       --> CTACGGACACTGTCTCGTCGCCGGGCTCAAGAAGTATCCGAGCAAGCTCA  Raphanus raphanistrum subsp. maritimus
FD577309       --> CTACGGACACTGTCTCGTCGCCGGGCTCAAGAAGTATCCGAGCAAGCTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD579298       --> CTACGGACACTGTCTCGTCGCCGGGCTCAAGAAGTATCCGAGCAAGCTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD938826       --> CTACGGACACTGTCTCGTCGCCGGGCTCAAGAAGTATCCGAGCAAGCTCA  Raphanus sativus var. oleiformis
EY900981       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               201    -    251
UN20095        --> TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGAGTCAAGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571612       <-- TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGAGTCAAGTGT
FD531768       <-- TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGAGTCAAGTGT
EX777599       <-- TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGA-GTCGAGAGTCAAGTGT
EY894813       <-- TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGAGTCAAGTGT
EY909936       <-- TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGAGTCAAGTGT
FD581635       <-- TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGAGTCAAGTGT
FD583308       <-- TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGAGTCAAGTGT
FY440258       <-- TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGAGTCAAGTGT
FY445551       <-- TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGAGTCAAGTGT
FY441355       <-- TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGAGTCAAGTGT
FY436898       <-- TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGAGTCAAGTGT
EY896396       <-- ........................gGGCGAAGAAGTCGAGAGTCAAGTGT
EW719944       <-- ..................................................
FD935095       <-- ..................................................
EX749728       --> TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGAGTCAAGTGT
EV566492       --> TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGAGTCAAGTGT
FD536265       --> TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGAGTCAAGTGT
FD989386       --> TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGAGTCAAGTGT
EW715311       --> TCCGCAAGGACTCGGCCAAGAAGACGTCGAAGAAGTCGAGAGTCAAGTGT
EX773781       --> TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGA-GTCGAGAGTCAAGTGT
EY898885       --> TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGAGTCAAGTGT
FD532470       --> TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGAGTCAAGTGT
EY913754       --> TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGAGTCAAGTGT
EY897295       --> TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGAGTCAAGTGT
FD577309       --> TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGAGTCAAGTGT
FD579298       --> TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGAGTCAAGTGT
FD938826       --> TCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGAGTCAAGTGT
EY900981       --> ........................gGGCGAAGAAGTCGAGAGTCAAGTGT

               251    -    301
UN20095        --> TTCATCAAGGTCGTGAACTACCAGCATCTGATGCCTACTCGTTACACGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571612       <-- TTCATCAAGGTCGTGAACTACCATCATTTGATGTCTACTCGTTACACGTT
FD531768       <-- TTCATCAAGGTCGTGAACTACCAGCATCTGATGCCTACTCGTTACACGTT
EX777599       <-- TTCATCAAGGTCGTGAACTACCAGCATCTGATGCCTACTCGTTACACGTT
EY894813       <-- TTCATCAAGGTCGTGGACTACCAGCATCTGATGCCTACTCGTTACACGTT
EY909936       <-- TTCATCAAGGTCGTGAACTACCAGCATCTGATGCCTACTCGTTACACGTT
FD581635       <-- TTCATCAAGGTCGTGAACTACCAGCATCTGATGCCTACTCGTTACGCGTT
FD583308       <-- TTCATCAAGGTCGTGAACTACCAGCATTTGATGCCTACTCGTTACACGTC
FY440258       <-- TTCATCAAGGTCGTGAACTACCAGCATCTGATGCCTACTCGTTACACGTT
FY445551       <-- TTCATCAAGGTCGTGAACTACCAGCATCTGATGCCTACTCGTTACACGTT
FY441355       <-- TTCATCAAGGTCGTGAACTACCAGCATCTGATGCCTACTCGTTACACGTT
FY436898       <-- TTCATCAAGGTCGTGAACTACCAGCATCTGATGCCTACTCGTTACACGTT
EY896396       <-- TTCATCAAGGTCGTGAACTACCAGCATCTGATGCCTACTCGTTACACGTT
EW719944       <-- ...............................TGCCTACTCGTTACACGTT
FD935095       <-- ..................................................
EX749728       --> TTCATCAAGGTCGTGAACTACCAGCATCTGATGCCTACTCGTTACACGTT
EV566492       --> TTCATCAAGGTCGTGAACTACCATCATCTGATGTCTACTCGTTACACGTT
FD536265       --> TTCATCAAGGTCGTGAACTACCAGCATCTGATGCCTACTCGTTACACGTT
FD989386       --> TTCATCAAGGTCGTGAACTACCAGCATCTGATGCCTACTCGTTACACGTT
EW715311       --> TTCATCAAGGTCGTGAACTACCATCATCTGATGCCTACTCGTTACACGTT
EX773781       --> TTCATCAAGGTCGTGAACTACCAGCATCTGATGCCTACTCGTTACACGTT
EY898885       --> TTCATCAAGGTCGTGGACTACCAGCATCTGATGCCTACTCGTTACACGTT
FD532470       --> TTCATCAAGGTCGTGAACTACCAGCATCTGATGCCTACTCGTTACACGTT
EY913754       --> TTCATCAAGGTCGTGAACTACCAGCATCTGATGCCTACTCGTTACACGTT
EY897295       --> TTCATCAAGGTCGTGAACTACCAGCATCTGATGCCTACTCGTTACACGTT
FD577309       --> TTCATCAAGGTCGTGAACTACCAGCATCTGATGCCTACTCGTTACGCGTT
FD579298       --> TTCATCAAGGTCGTGAACTACCAGCATCTGATGCCTACTCGTTACACGTC
FD938826       --> TTCATCAAGGTCGTGAACTACCAGCATCTGATGCCTACTCGTTACACGTT
EY900981       --> TTCATCAAGGTCGTGAACTACCAGCATCTGATGCCTACTCGTTACACGTT

               301    -    351
UN20095        --> GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571612       <-- GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
FD531768       <-- GGGCGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
EX777599       <-- GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
EY894813       <-- GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
EY909936       <-- GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
FD581635       <-- GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
FD583308       <-- GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
FY440258       <-- GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
FY445551       <-- GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
FY441355       <-- GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
FY436898       <-- GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
EY896396       <-- GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
EW719944       <-- GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
FD935095       <-- ..................................................
EX749728       --> GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
EV566492       --> GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
FD536265       --> GGGCGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
FD989386       --> GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
EW715311       --> GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
EX773781       --> GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
EY898885       --> GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
FD532470       --> GGACGTGGATCTGAAGGAGGTTGCTACTCTCGAGGCTCTGTCTTCGAAGG
EY913754       --> GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
EY897295       --> GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
FD577309       --> GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
FD579298       --> GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
FD938826       --> GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG
EY900981       --> GGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGG

               351    -    401
UN20095        --> ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571612       <-- ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
FD531768       <-- ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
EX777599       <-- ATAAGAAGGTGACGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
EY894813       <-- ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
EY909936       <-- ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
FD581635       <-- ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
FD583308       <-- ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
FY440258       <-- ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
FY445551       <-- ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
FY441355       <-- ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
FY436898       <-- ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
EY896396       <-- ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
EW719944       <-- ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
FD935095       <-- ..................................................
EX749728       --> ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
EV566492       --> ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
FD536265       --> ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
FD989386       --> ATGAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
EW715311       --> ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
EX773781       --> ATAAGAAGGTGACGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
EY898885       --> ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
FD532470       --> ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
EY913754       --> ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
EY897295       --> ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
FD577309       --> ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
FD579298       --> ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
FD938826       --> ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG
EY900981       --> ATAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGG

               401    -    451
UN20095        --> TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTCTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571612       <-- TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTCTGAGA
FD531768       <-- TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTTTGAGA
EX777599       <-- TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTCTGAGA
EY894813       <-- TTCAAGACCAGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTCTGAGA
EY909936       <-- TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTCTGAGA
FD581635       <-- TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTCTGAGA
FD583308       <-- TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTTTGAGA
FY440258       <-- TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTCTGAGA
FY445551       <-- TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTCTGAGA
FY441355       <-- TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTCTGAGA
FY436898       <-- TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTCTGAGA
EY896396       <-- TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTCTGGGA
EW719944       <-- TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTTTGAGA
FD935095       <-- ..................................................
EX749728       --> TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTCTGAGA
EV566492       --> TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTCTGAGA
FD536265       --> TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTCTGAGA
FD989386       --> TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTCTGAGA
EW715311       --> TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTTTGAGA
EX773781       --> TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTCTGAGA
EY898885       --> TTCAAGACCAGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTCTGAGA
FD532470       --> TTCAAGACTGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTCTGAGA
EY913754       --> TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTCTGAGA
EY897295       --> TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTCTGAGA
FD577309       --> TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTCTGAGA
FD579298       --> TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTCTGAGA
FD938826       --> TTCAAGACCGGTAAGAGCAGGTGGTTCTTCACCAAGCTCAGGTTCTGAGA
EY900981       --> TTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGCTCAGGTTCTGGGA

               451    -    501
UN20095        --> AATGAGTTTT-TCTTTTTATCTTTTGTAATGGAATTTACGGATTACTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571612       <-- AATGAGTTTT-TCTTTTTATCTTTTGTAATGGAATTTACGGATTACTTTT  Raphanus raphanistrum subsp. landra
FD531768       <-- AATGAGTTTT-TCTTTTTATCTTTTGTAATGGAATTTACGGATTACTTTT  Raphanus raphanistrum subsp. maritimus
EX777599       <-- AATGAGTTTT-TCTTTTTATCTTTTGTAATGGAATTTACGGATTACTTTT  Raphanus raphanistrum subsp. landra
EY894813       <-- AATGAGTTTT-TCTTTTTATCTTTTGTAATGGAATTTACGGATTACTTTT  Raphanus raphanistrum subsp. maritimus
EY909936       <-- AATGTGTTTTCTTTTTTTATCTTCTGTAGTGGAATTTACGGATTACTTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD581635       <-- AATGAGTTTTCTTTTTTTATCTTCTGTAATGGAATTTACGGATTACTTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD583308       <-- AATGAGTTTTCTTTTTTTATCTTCTGTAATGGAATTTACGGATTACTTTT  Raphanus sativus cv Rat-Tail Radish #3870
FY440258       <-- AATGAGTTTT-CTTTTTTATCTTTTGTAATGGAATTTACGGATTACTTTT  Raphanus sativus cv GSK3-1
FY445551       <-- AATGAGTTTT-CTTTTTTATCTTTTGTAATGGAATTTACGGATTACTTTT  Raphanus sativus cv GSK3-1
FY441355       <-- AATGAGTTTT-CTTTTTTATCTTTTGTAATGGAATTTACGGATTACTTTT  Raphanus sativus cv GSK3-1
FY436898       <-- AATGAGTTTT-CTTTTTTATCTTTTGTAATGGAATTTACGGATTACTTTT  Raphanus sativus cv GSK3-1
EY896396       <-- AATGAGTTTT-TCTTTTTATCTTTTGTAATGGAATTTACGGATTACTTTT  Raphanus raphanistrum subsp. maritimus
EW719944       <-- AATGAGTTTTCTTTTTTTATCTTCTGTAATGGAATTTACGGATTACTTTT  Raphanus sativus var. oleiformis
FD935095       <-- ...............................GAATTTACGGATTACTTTT  Raphanus sativus var. oleiformis
EX749728       --> AATGAGTTTT-TCTTTTTATCTTTTGTAATGGAATTTACGGATTACTTTT  Raphanus raphanistrum subsp. maritimus
EV566492       --> AATGAGTTTT-TCTTTTTATCTTTTGTAATGGAATTTACGGATTACTTTT  Raphanus raphanistrum subsp. landra
FD536265       --> AATGAGTTTT-TCTTTTTATCTTTTGTAATGGAATTTACGGATTACTTTT  Raphanus raphanistrum subsp. maritimus
FD989386       --> AATGAGTTTT-TCTTTTTATCTTTTGTAATGGAATTTACGGATTACTTTT  Raphanus raphanistrum subsp. landra
EW715311       --> AATGAGTTTTCTTTTTTTATCTTCTGTAATGGAATTTACGGATTACTTTT  Raphanus sativus var. oleiformis
EX773781       --> AATGAGTTTT-TCTTTTTATCTTTTGTAATGGAATTTACGGATTACTTTT  Raphanus raphanistrum subsp. landra
EY898885       --> AATGAGTTTT-TCTTTTTATCTTTTGTAATGGAATTTACGGATTACTTTT  Raphanus raphanistrum subsp. maritimus
FD532470       --> AATGAGTTTT-TCTTTTTATCTTTTGTAATGGAATTTACGGATTACTTTT  Raphanus raphanistrum subsp. maritimus
EY913754       --> AATGTGTTTTCTTTTTTTATCTTCTGTAGTGGAATTTACGGATTACTTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897295       --> AATGAGTTTTCTTTTTTTATCTTCTGTAATGGAATTTACGGATTACTTTT  Raphanus raphanistrum subsp. maritimus
FD577309       --> AATGAGTTTTCTTTTTTTATCTTCTGTAATGGAATTTACGGATTACTTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD579298       --> AATGAGTTTTCTTTTTTTATCTTCTGTAATGGAATTTACGGATTACTTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD938826       --> AATGAGTTTTCTTTTTTTATCTTCTGTAATGGAATTTACGGATTACTTTT  Raphanus sativus var. oleiformis
EY900981       --> AATGAGTTTT-TCTTTTTATCTTTTGTAATGGAATTTACGGATTACTTTT  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN20095        --> GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571612       <-- GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTGAA
FD531768       <-- GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTGAA
EX777599       <-- GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTGAA
EY894813       <-- GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTG..
EY909936       <-- GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTGAA
FD581635       <-- GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTGAA
FD583308       <-- GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTG..
FY440258       <-- GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTT-GAA
FY445551       <-- GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTT-GAA
FY441355       <-- GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTGAA
FY436898       <-- GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTGAA
EY896396       <-- GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTG..
EW719944       <-- GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTGAA
FD935095       <-- GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTGAA
EX749728       --> GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTGAA
EV566492       --> GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTGAA
FD536265       --> GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTGAA
FD989386       --> GTAGTTCTAAAATGGTGATGTGGATCTTGTTTAAGACTTGTTGGTTTGAA
EW715311       --> GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTGAA
EX773781       --> GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTGAA
EY898885       --> GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTG..
FD532470       --> GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTGAA
EY913754       --> GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTGAA
EY897295       --> GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTGAA
FD577309       --> GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTGAA
FD579298       --> GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTG..
FD938826       --> GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTGAA
EY900981       --> GTAGTTCTAAAATGGTGATGTGGATCGTGTTTAAGACTTGTTGGTTTG..

               551    -    601
UN20095        --> AGATTTTGCCTTTTTT-AACATTTATCATCATTTGCTTAGCTTGAATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571612       <-- AGATTTTGCCTTTTTT-AACATTTATCATCATTTGCTTAGCTTGAATTTT  Raphanus raphanistrum subsp. landra
FD531768       <-- AGATTTTGCCTTTTTT-AACATTTATCATCATTTGCTTAGCTTGAATTTT  Raphanus raphanistrum subsp. maritimus
EX777599       <-- AGATTTTGCCTTTTTT-AACATTT..........................  Raphanus raphanistrum subsp. landra
EY894813       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY909936       <-- AGATTTTGCCTTTTTTt.................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD581635       <-- AGATTTTGCCTTTTTTTAACATTTATCATCATTTGCTTAGCTTGAATTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD583308       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY440258       <-- AGATT.............................................  Raphanus sativus cv GSK3-1
FY445551       <-- AGATTTTGCCTTTTTac.................................  Raphanus sativus cv GSK3-1
FY441355       <-- AGATTTTGCCTTTTTT-AACATTTATCATCATTTGCTTAGCTTGAATTTT  Raphanus sativus cv GSK3-1
FY436898       <-- AGATTTTGCCTTTTTT-AAC..............................  Raphanus sativus cv GSK3-1
EY896396       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW719944       <-- AGATTTTGCCTTTTTTTAACATTTATCATCATTTGCTTAGCTTGAATTTT  Raphanus sativus var. oleiformis
FD935095       <-- AGATTTTGCCTTTTTTTAACATTTATCATCATTTGCTTAGCTTGAATTTT  Raphanus sativus var. oleiformis
EX749728       --> AGATTTTGCCCTTTTT-AACATTTATCATC....................  Raphanus raphanistrum subsp. maritimus
EV566492       --> AGATTTTGCCTTTTTT-AACATTTATCATCATTTGCTTAGCTTGAATTTT  Raphanus raphanistrum subsp. landra
FD536265       --> AGATTTTGCCTTTTTT-AACATTTATCATCATTTGCTTAGCTTGAATTTT  Raphanus raphanistrum subsp. maritimus
FD989386       --> AGATTTTGCCTTTTTT-AACATTTATCATCATTTGCTTAGCTTGAATTTT  Raphanus raphanistrum subsp. landra
EW715311       --> AGATTTTGCCTTTTTTTAACATTTATCATCATTTGCTTAGCTTGAATTTT  Raphanus sativus var. oleiformis
EX773781       --> AGATTTTGCCTTTTTT-AACATTT..........................  Raphanus raphanistrum subsp. landra
EY898885       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD532470       --> AGATTTTGCCTTTTTT-AACATTTATCATCATTTGCTTAGCTTGAATTTT  Raphanus raphanistrum subsp. maritimus
EY913754       --> AGATTTTGCCTTTTTTt.................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897295       --> AGATTTTGCCTTTTTTTAACATTTATCATCATTTGCTTAGCTTGAATTTT  Raphanus raphanistrum subsp. maritimus
FD577309       --> AGATTTTGCCTTTTTTTAACATTTATCATCATTTGCTTAGCTTGAATTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD579298       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD938826       --> AGATTTTGCCTTTTTTTAACATTTATCATCATTTGCTTAGCTTGAATTTT  Raphanus sativus var. oleiformis
EY900981       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN20095        --> CAAGATTTACAGTGCTGGATTGGTAGTGAAATGTGCTTGTCTGAATTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571612       <-- CAAG..............................................
FD531768       <-- CAAGATTc..........................................
EX777599       <-- ..................................................
EY894813       <-- ..................................................
EY909936       <-- ..................................................
FD581635       <-- CAAGATCTACAGTGCTGGATTGGTAGTGAAATGTGCTTGTCTGAATTTGT
FD583308       <-- ..................................................
FY440258       <-- ..................................................
FY445551       <-- ..................................................
FY441355       <-- CAAGATTTACAGTGCTGTATTGGTAGTGAAATGTGCTTGTCTGAATTTGT
FY436898       <-- ..................................................
EY896396       <-- ..................................................
EW719944       <-- CAATATTTACAGTGCTGGATTGGTAGTGAAATGTGCTTGTCTGAATTTGT
FD935095       <-- CAAGATTTACAG......................................
EX749728       --> ..................................................
EV566492       --> CAAG..............................................
FD536265       --> CAAGATTc..........................................
FD989386       --> CAAGATTTACAGTGCTGGATTGGTAGTGAAATGTGCTTGTC.........
EW715311       --> CAATATTTACAGT.....................................
EX773781       --> ..................................................
EY898885       --> ..................................................
FD532470       --> CAAG..............................................
EY913754       --> ..................................................
EY897295       --> CAAGATTTACAGTGCTGGATTGGTAGTGAAATGTGCTTGTCTGAATTTGT
FD577309       --> CAAGATCTACAGTGCTGGATTGGTAGTGAAATGTGCTTGTCTGAATTTGT
FD579298       --> ..................................................
FD938826       --> CAAGATTTACAGTGCTGGATTGGTAGTGAAATGTGCTTGTCTGAATTTGT
EY900981       --> ..................................................

               651    -    701
UN20095        --> GTTTCATTGCCAACTGTTATGAATCAAAGTAAATGCTTACGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571612       <-- ...........................................
FD531768       <-- ...........................................
EX777599       <-- ...........................................
EY894813       <-- ...........................................
EY909936       <-- ...........................................
FD581635       <-- GTTTCATTGCCAACTGTTATGAATCAAA...............
FD583308       <-- ...........................................
FY440258       <-- ...........................................
FY445551       <-- ...........................................
FY441355       <-- GTTTCATTGCCAACTGTTATGAATCAAAGTAAATGCTTACGTC
FY436898       <-- ...........................................
EY896396       <-- ...........................................
EW719944       <-- GTTTCATTGCCAAaacaag........................
FD935095       <-- ...........................................
EX749728       --> ...........................................
EV566492       --> ...........................................
FD536265       --> ...........................................
FD989386       --> ...........................................
EW715311       --> ...........................................
EX773781       --> ...........................................
EY898885       --> ...........................................
FD532470       --> ...........................................
EY913754       --> ...........................................
EY897295       --> GTTTCATTGCCAACTGTTATGAATCAAA...............
FD577309       --> GTTTCATTGCCAACTGTTATGAATCAAA...............
FD579298       --> ...........................................
FD938826       --> GTTcc......................................
EY900981       --> ...........................................