RadishBase

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Alignment for radish unigene UN20108

               1      -     51
UN20108        --> GATGAATAAAAGAAACGTTGAACTCCTATCTACCATTGGATTTTGTTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- ..................................................
FY434695       <-- ..................................................
EX765784       <-- ..................................................
EY946324       <-- ..................................................
EY901146       <-- ..................................................
EV551266       <-- ..................................................
FD980341       <-- ..................................................
FD557996       <-- ..................................................
EY937135       --> GATGAATAAAAGAAACGTTGAACTCCTATCTACCATTGGATTTTGTTTTG
EY896525       --> ............AAACGTTGAACTCCTATCTACCATTGGATTTTATTTTG
EY911787       --> ............AAACGTTGAACTCCTATCTACCATTGGATTTTGTTTCG
FY454258       --> ............gAACGTTGA-CTCCTATCTACCATTGGATTTTGTTTTG
FD976237       --> ...............CGTTGAACTCCTATCTACCATTGGATTTTGTTTTG
EX899336       --> .................................................g
EV546395       --> .................................................g
FY444826       --> ..................................................
EY942443       --> ..................................................

               51     -    101
UN20108        --> AGTACAAAAGTCTCTCCTTGTGGGAAAACTATTAATAAACATACTGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- ..................................................
FY434695       <-- ..................................................
EX765784       <-- ..................................................
EY946324       <-- ..................................................
EY901146       <-- ..................................................
EV551266       <-- ..................................................
FD980341       <-- ..................................................
FD557996       <-- ..................................................
EY937135       --> AGTACAAAAGTCTCTCCTTGTGGGAAAACTATTAATAAACATACTGTTTT
EY896525       --> AGTACAAAAGTCTCTCCTTCTGGGAAAACTATTAATAAACATACTGTTTT
EY911787       --> AGTACAAAAGTCTCTCCTTGTGGGAAAACTATTAATAAACATACTGTTTT
FY454258       --> AGTACAAAAGTCTCTCCTTGTGGGAAAACTATTAATAAACATACTGTTTT
FD976237       --> AGTACAAAAGTCTCTCCTTGTGGGAAAACTATTAATAAACATATTGTTTT
EX899336       --> cGTACAAAAGTCTCTCCTTGTGGGAAAACTATTAATAAACATACTGTTTT
EV546395       --> ggcACAAAAGTCTCTCCTTGTGGGAAAACTATTAATAAACATACTGTTTT
FY444826       --> ...........CTCTCCTTGTGGGAAA-CTATTAATAAACATACTGTTTT
EY942443       --> ..................................................

               101    -    151
UN20108        --> TAGTTAAAACAAATTAAGTACTGAGTTCTTGTATTTACTAACTAGCTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- ..................................................
FY434695       <-- ..................................................
EX765784       <-- ..................................................
EY946324       <-- ..................................................
EY901146       <-- ..................................................
EV551266       <-- ..................................................
FD980341       <-- ..................................................
FD557996       <-- ..................................................
EY937135       --> TAGTTAAAACAAATTAAGTACTGAGTTCTTGTATTTACTAACTAGCTTGA
EY896525       --> TAGTTAAAACAAATTAAGTACTGAGTTCTTGTATTTACTAACTAGCTTGA
EY911787       --> TAGTTAAAACAAATTAAGTACTGACTTCTTGTATTTACTAACTAGCTTGA
FY454258       --> TAGTTAAAACAAATTAAGTACTGAGTTCTTGTATTTACTAACTAGCTTGA
FD976237       --> TAGTTAAAACAAATTAAGTACTGAGTTCTTGTATTTACTAACTAGCTTGA
EX899336       --> TAGTTAAAACAAATTAGGTACTGAGTTCTTGTATTTACTAACTAGCTTGA
EV546395       --> TAGTTAAAACAAATTAAATACTGAGTTCTTGTATTTACTAACTAGCTTGA
FY444826       --> TAGTTAAA-CAAATTAAGTACTGAGTTCTTGTATTTACTAACTAGCTTGA
EY942443       --> ..................................................

               151    -    201
UN20108        --> ATCGCTTGAGCTGCAGGAGTATCATCGTAGACCAGTTCCTCCACTGGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY434695       <-- ..................................................  Raphanus sativus cv GSK3-1
EX765784       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946324       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY901146       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV551266       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980341       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557996       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY937135       --> ATCCCTTGAGCTGCAGGAGTATCATCGTAGAC-AGTTCCTCCACTGGATT  Raphanus sativus cv Early Scarlet Globe
EY896525       --> ATCGCTTGAGCTGCAGGAGTATCATCATGGACCAGTTCCTCCACTGGATT  Raphanus raphanistrum subsp. maritimus
EY911787       --> ATCGCTTGAGCTGCAGGAGTATCATCATAGACCAGTTCCTCCACTGGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY454258       --> ATCCCTTGAGCTGCAGGAGTATCATCGTAGACCAGTTCCTCCACTGGATT  Raphanus sativus cv GSK3-1
FD976237       --> ATCGCTTGAGCTGCAGGAGTATCATCATAGACCAGTTCCTCCACTGGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899336       --> ATCCCTTGAGCTGCAGGAGTATCATCGTAGACCAGTTCCTCCACTGGATT  Raphanus sativus cv Early Scarlet Globe
EV546395       --> ATCGCTTGAGCTGCAGGAGTATCATCATAGACCAGTTCCTCCACTGGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444826       --> ATCCCTTGAGCTGCAGGAGTATCATCGTAGACCAGTTCCTCCACTGGATT  Raphanus sativus cv GSK3-1
EY942443       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               201    -    251
UN20108        --> CATCTCAGACCACGTAGCTGCATCCGCGTATCCTAGCTCAAACAACTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- ..................................................
FY434695       <-- ..................................................
EX765784       <-- ..................................................
EY946324       <-- ..................................................
EY901146       <-- ..................................................
EV551266       <-- ..................................................
FD980341       <-- ..................................................
FD557996       <-- ..................................................
EY937135       --> CATCTCAGACCACGTAGCTGCATCCGCGTATCCTAGCTCAAACAACTTAT
EY896525       --> CATCTCAAACCACGCAGCTGCATCCGCGTATCCTAGCTCAAACAACCTAT
EY911787       --> CATCTCAAACCACGTAGCTGCATCCGCGTATCCTAGCTCAAACAACTTAT
FY454258       --> CATCTCAGACCACGTAGCTGCATCCGCGTATCCTAGCTCAAACAACTTAT
FD976237       --> CATCTCAAACCACGTAGCTGCATCCGCGTATCCTAGCTCAAACAACTTAT
EX899336       --> CATCTCAGACCACGTAGCTGCATCCGCGTATCCTAGCTCAAACAACTTAT
EV546395       --> CATCTCAGACCACGTAGCTGCATCCGCGTATCCTAGCTCAAACAAC--AT
FY444826       --> CATCTCAGACCACGTAGCTGCATCCGCGTATCCTAGCTCAAACAACTTAT
EY942443       --> .....caaACCACGTAGCTGCATCCGCGTATCCTAGCTCAAACAACTTAT

               251    -    301
UN20108        --> CCAACACCTCGTCCTCTGCTGGCTCCAATGCCCATTGCAATAGCTGTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- ..................................................
FY434695       <-- ..................................................
EX765784       <-- ..................................................
EY946324       <-- ..................................................
EY901146       <-- ..................................................
EV551266       <-- ..................................................
FD980341       <-- ..................................................
FD557996       <-- ..................................................
EY937135       --> CCAACACCTCGTCCTCTGCTGGCTCCAATGCCCATTGCAATAGCTGTCTT
EY896525       --> CCAACACCTCGTCCTCTGCTGGCTCCAATGCCCATTGCAATAGCTGTCTT
EY911787       --> CCAACACCTCGTCCTCTGCTGGCTCCAATGCCCATGTCAATAGCTGTCTT
FY454258       --> CCAACACCTCGTCCTCTGCTGGCTCCAATGCCCATTGCA...........
FD976237       --> CCAAGACCTCGTCCTCTGCTGGCTCCAATGCCCATTGCAATAGCTGTCTT
EX899336       --> CCAACACCTCGTCCTCTGCTGGCTCCAATGCCCATTGCAATAGCTGTCTT
EV546395       --> CCAACACCTCGTCCTCTGCTGGCTCCAATGCCCATTGCAATAGCTGTCTT
FY444826       --> CCAACACCTCGTCCTCTGCTGGCTCCAATGCCCATTGCAATAGCTGTCTT
EY942443       --> CCAACACCTCGTCCTCTGCTGGCCCCAATGCCCATTGCAATAGCTGTCTT

               301    -    351
UN20108        --> GCGGTTGCCCTGTTTAGAGGGTTGCAATCTGGGCTGATCCCAATACCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- ..........................................ATACCCTT
FY434695       <-- ..................................................
EX765784       <-- ..................................................
EY946324       <-- ..................................................
EY901146       <-- ..................................................
EV551266       <-- ..................................................
FD980341       <-- ..................................................
FD557996       <-- ..................................................
EY937135       --> GCGGTTGCCCTGTTTAGAGGGTTGCAATCTGGGCTGATCCCAATACCCTT
EY896525       --> GCGGTTGCCCTGTTTAAAGGGTTGCAATCTGGGCTGATCCCAATACCCTT
EY911787       --> GCGGTTGCCCTGTTTAGAGGGTTGCAATCTGGGCTGATCCCAATACCCTT
FY454258       --> ..................................................
FD976237       --> GCGGTTGCCCTGTTTAGAGGGTTGCAATCTGGGCTGATCCCAATACCCTT
EX899336       --> GCGGTTGCCCTGTTTAGAGGGTTGCAATCTGGGCTGATCCCAATACCCTT
EV546395       --> GCGGTTGCCCTGTTTAGAGGGTTGCAATCTGGGCTGATCCCAATACCCTT
FY444826       --> GCGGTTGCCCTGTTTAGAGGGTTGCAATCTGGGCTGATCCCAATACCCTT
EY942443       --> GCGGTTGCCCCGTTTAGAGGGTTGCAATCTGGGCTGATCCCAATACCCTT

               351    -    401
UN20108        --> TAGTTTGAAGCTACTAGCGGAAAACGCACAAACCCGAACTGTTTTAGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- TAGTTTGAAGCTACTAGCGGAAAACGCACAAACTCGAACTGTTTTAGCAG
FY434695       <-- ...........................................TTAGTAG
EX765784       <-- ..................................................
EY946324       <-- ..................................................
EY901146       <-- ..................................................
EV551266       <-- ..................................................
FD980341       <-- ..................................................
FD557996       <-- ..................................................
EY937135       --> TAGTTTGAAGCTACTAGCGGAAAACGCACAAACCCGAACTGTTTTAGTGG
EY896525       --> TAGTTTGAAGCTACTAGCGGAAAACGCACAAACCCGAACTGTTTTAGTAG
EY911787       --> TAGTTTGAAGCTACTAGCGGAAAACGCACAAACTCGAACTGTTTTAGCAG
FY454258       --> ..................................................
FD976237       --> TAGTTTGAAGCTACTAGCGGAAAACGCACAAACTCGAACTGTTTTAGTAG
EX899336       --> TAGTTTGAAGCTACTAGCGGAAAACGCACAAACCCGAACTGTTTTAGTAG
EV546395       --> TAGTTTGAAGCTACTAGCGGAAAACGCACAAACCCGAACTGTTTTAGTAG
FY444826       --> TAGTTTGAAGCTACTAGCGGAAAACGCACAAACCCGAACTGTTTTAGTAG
EY942443       --> TAGTTTGAAGCTACTAGCGGAAAACGCACAAACCCGAACTGTTTTAGTAG

               401    -    451
UN20108        --> CAGCAGTTGGTGGCATAAACAATGTCAAACCTCCATCAACACAAACTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- CAGCAGTTGGTGGCATAAACAATGTCAAACCTCCATCAACACAAACTCGA
FY434695       <-- CAGCAGTTGTGGGCATAAACAATGTCAAACCTCCATCAACACAAACTCGA
EX765784       <-- ..................................................
EY946324       <-- ..................................................
EY901146       <-- ..................................................
EV551266       <-- ..................................................
FD980341       <-- ..................................................
FD557996       <-- ..................................................
EY937135       --> CAGCAGTTGGTGGCATAAACAATGTCAAACCTCCATCAACACAAACTCGA
EY896525       --> CAGCAGTTGGTGGCATAAACAATGTCAAACCTCCATCAACACAAACTCGA
EY911787       --> CAGCAGTTGGTGGCATAAACAATGTCAAACCTCCATCAACACAAACTCGA
FY454258       --> ..................................................
FD976237       --> CAGCAGTTGGTGGCATAAACAATGTCAAACCTCCATCAACACAAACTCGA
EX899336       --> CAGCAGTTGGTGGCATAAACAATGTCAAACCTCCATCAACACAAACTCGA
EV546395       --> CAGCAGTTGGTGGCATAAACAATGTCAAACCTCCATCAACACAAACTCGA
FY444826       --> CAGCAGTTGGTGGCATAAACAATGTCAAACCTCCATCAACACAAACTCGA
EY942443       --> CAGCAGTTGGTGGCATAAACAATGTCAAACCTCCATCAACACAAACTCGA

               451    -    501
UN20108        --> TTACGGAACATTGTTACAGGCCTTGGTGCAAGATATCCTGGAATAAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- TTACGGAACAGTGTTACAGGCCTTGGTGCAAGATATCCTGGAATAAAGGA
FY434695       <-- TTACGGAACATTGTTACAGGCCTTGGTGCAAGATATCCTGGAATAAAGGA
EX765784       <-- ..............................AGATATCCTGGAATAAAGGA
EY946324       <-- ............................gcAGATATC-TGGAATAAAGGA
EY901146       <-- ..................................................
EV551266       <-- ..................................................
FD980341       <-- ..................................................
FD557996       <-- ..................................................
EY937135       --> TTACGGAACATTGTTACAGGCCTTGGTGCAAGATATCCTGGAATAAAGGA
EY896525       --> TTACGGAACATTGTTACAGGCCTTGGTGCAAAATATCCTGGAATAAAGGA
EY911787       --> TTACGGAACAGTGTTACAGGCCTTGGTGCAAGATATCCTGGAATAAAGGA
FY454258       --> ..................................................
FD976237       --> TTACGGAACATTGCTACAGGCCTTGGTGCAAGATATCCCGGAATAAAGGA
EX899336       --> TTACGGAACATTGTTACAGGCCTTGGTGCAAGATATCCTGGAATAAAGGA
EV546395       --> TTACGGAACATTGTTACAGGCCTTGGTGCAAGATATCCTGGAATAAAGGA
FY444826       --> TTACGGAACATTGTTACAGGCCTTGGTGCAAGATATCCTGGAATAAAGGA
EY942443       --> TTACGGAACATTGTTACAGGCCTTGGTGCAAGATATCCTGGAATAAAGGA

               501    -    551
UN20108        --> AGATGTAAAAACAGCATTTATAAGGTCACTTTTGGAGTCGAATTGATCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- AGATGTAAAAACAGCATTTATAAGGTCACTTTTGGAGTCGAATTGATCCA
FY434695       <-- AGATGTAAAAACAGCATTTATAAGGTCACTTTTGGAGTCGAATTGATCCA
EX765784       <-- AGATGTAAAA-CAGCATTTATAAGGTCACTTTTGGAGTCGAATTGATCCA
EY946324       <-- AGATGTAAAA-CAGCATTTATAAGGTCACTTT-GGAGTCGAATTGATCCA
EY901146       <-- ..................................................
EV551266       <-- ..................................................
FD980341       <-- ..................................................
FD557996       <-- ..................................................
EY937135       --> AGATGTAAAAACAGCATTTATAAGGTCACTTTTGGAGTCGAATTGATCCA
EY896525       --> AAATGTAAAAACAGCATTTATAAGGTCACTTTTGGAGTCGAATTGATCCA
EY911787       --> AGATGTAAAAACAGCATTTATAAGGTCACTTTTGGAGTCGAATTGATCCA
FY454258       --> ..................................................
FD976237       --> AGATGTAAAAACAGCATTTATAAGGTCACTTTTGGAGTCGAATTGATCCA
EX899336       --> AGATGTAAAAACAGCATTTATAAGGTCACTTTTGGAGTCGAATTGATCCA
EV546395       --> AGATGTAAAAACAGCATTTATAAGGTCACTTTTGGAGTCAAATTGATCCA
FY444826       --> AGATGTAAAAACAGCATTTATAAGGTCACTTTTGGAGTCGAATTGATCCA
EY942443       --> AGATGTAAAAACAGCATTTATAAGGTCACTTTTGGAGTCGAATTGATCCA

               551    -    601
UN20108        --> CCAGTAAACCTCTAGGTCTCCATAACACCTGTGTGACGGCAACACGAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- CCAGTAAACCTCTAGGTCTCCATAACACCTGTGTGACGGCAACACGAACT
FY434695       <-- CCAGTAAACCTCTAGGTCTCCATAACACCTGTGTGACGGCAACACGAACT
EX765784       <-- CCAGTAAACCTCTAGGTCTCCATAACACCTGTGTGACGGCAACACGAACT
EY946324       <-- CCAGTAAACCTCTAGGTCTC-ATAACACCTGTGTGACGGCAACACGAACT
EY901146       <-- ..........................caCTGTGTGACGGCAACACGAACT
EV551266       <-- ..............................GTGTGACGGCAACACGAACT
FD980341       <-- ..................................................
FD557996       <-- ..................................................
EY937135       --> CCAGTAAACCTCTAGGTCTCCATAACACCTGTGTGACGGCAACACGAACT
EY896525       --> CCAGTAAACCTCTAGGTCTCCATAACACCTGTGTGACGGCAACACGAACT
EY911787       --> CCAGTAAACCTCTAGGTCTCCATAACACCTGTGTGACGGCAA........
FY454258       --> ..................................................
FD976237       --> CAAGTAAACCTCTAGGTCTCCATAACACCTGTGTGACGGCAACACGAACT
EX899336       --> CCAGTAAACCTCTAGGTCTCCATAACACCTGTGTGACGGCAACACGAACT
EV546395       --> CCAGTAAACCTCTAGGTCTCCATAACACCTGTGTGACGGCAACACGAACT
FY444826       --> CCAGTAAACCTCTAGGTCTCCATAACACCTGTGTGACGGCAACACGAACT
EY942443       --> CCAGTAAACCTCTAGGTCTTCATAACACCTGTGTGACGGCAACACGAACT

               601    -    651
UN20108        --> CTGCCATTACACCTAGTATGAATATCATCCGGGAGTAATTTCTCCATAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- CTGCCATTACACCTAGTATGAATATCATCCGGCAGTAATTTCTCCATAGA
FY434695       <-- CTGCCATTACACCTAGTATGAATATCATCCGGGAGTAATTTCTCCATAGA
EX765784       <-- CTGCCATTACACCTAGTATGAATATCATCCGGCAGTAATTTCTCCATAGA
EY946324       <-- CTGCCATTACACCTAGTATGAATATCATCCGGGAGTAATTTCTCCATAGA
EY901146       <-- CTGCCATTACAC-TAGTATGA-TATCATCCGGGAGTAGTTTCTCCATAGA
EV551266       <-- CTGCCATTACACATAGTATGAATATCATCCGGGAGTAATTTCTCCATAGA
FD980341       <-- ..................................................
FD557996       <-- ..................................................
EY937135       --> CTGCCATTACACCTAGTATGAATATCATCCGGGAGTAATTTCTCCATAGA
EY896525       --> CTGCCATTACACCTAGTATGAATATCATCCGGG.................
EY911787       --> ..................................................
FY454258       --> ..................................................
FD976237       --> CTGCCATTACACCTAGTGTGAATATCATCCGGGAGTAATTTCTCCATAGA
EX899336       --> CTGCCATTACACCTAGTATGAATATCATCCGGGAGTAATTTCTCCATAGA
EV546395       --> CTGCCATTACACCTAGTATGAATATCATCCGGGAGTAATTTCTCCATAGA
FY444826       --> CTGCCATTACACCTAGTATGAATATCATCCGGGAGTAATTTCTCCATAGA
EY942443       --> CTGCCATTACACCTAGTATGAATATCATCCGGGAGTAATTTCTCCATAGA

               651    -    701
UN20108        --> CTCTCTGAGGACAGCCCCAAGGCGAAAAGCAGTGCCATTGCGTCGACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- CTCTCTGAGGAAAGCCCCAAGACGAAAAGCAGTGCCATTGCGACGACAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY434695       <-- CTCTCTGAGGACAGCCCCAAGACGAAAAGCGGTGCCATTGCGTCGACAAT  Raphanus sativus cv GSK3-1
EX765784       <-- CTCTCTGAGGACAGCCCCAAGACGAAAAGCAGTGCCATTGCGACGACAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946324       <-- CTCTCTGAGGACAGCCCCAAGACGAAAAGCGGTGCCATTGCGTCGACAAT  Raphanus sativus cv Rat-Tail Radish #3870
EY901146       <-- CTCTCTGAGTACAGCCCCAAGGCGAAAAGCAGTGCCATTGCGTCGACAAT  Raphanus raphanistrum subsp. maritimus
EV551266       <-- CTCTCTGAGTACAGCCCCAAGGCGAAAAGCAGTGCCATTGCGTCGACAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980341       <-- ...........................AGCAGTGCCATTGCGTCGACAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD557996       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY937135       --> CTCTCTGAGTACAGCCCCAAGGCGAAAAGCAGTGCCATTGCGTC......  Raphanus sativus cv Early Scarlet Globe
EY896525       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY911787       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY454258       --> ..................................................  Raphanus sativus cv GSK3-1
FD976237       --> CTCTCTGAGGACAGCCCCAAGGCGAAAAGCAGTGCCATTGCGTCGACAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX899336       --> CTCTCTGAGTACAGCCCCAAGGCGAAAAGCAGTGCCATTGCGTCGACAAT  Raphanus sativus cv Early Scarlet Globe
EV546395       --> CTCTCTGAGTACAGCCCCAAGGCGAAAAGCAGTGCCATTGCGTCGACAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY444826       --> CTCTCTGAGGACAGCCCCAAGACGAAAAGCGGTGCCATTGCGTCGACAAT  Raphanus sativus cv GSK3-1
EY942443       --> CTCTCT............................................  Raphanus sativus cv Rat-Tail Radish #3870

               701    -    751
UN20108        --> CATCAGCAAGAACCTTGGTAGCTTCAAGGGCTTCCCACATAGAGGATCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- CATCAGCAAGAACCTTGGTAGCTTCAAGGGCTTCCCACATAGAGGATCCT
FY434695       <-- CATCAGCAAGAACCTTGGTAGCTTCAAGGGCTTCCCACATAGAGGATCCT
EX765784       <-- CATCAGCAAGAACCTTGGTAGCTTCAAGGGCTTCCCACATAGAGGATCCT
EY946324       <-- CATCAGCAAGAACCTTGGTAGCTTCAAGGGCTTCCCACATAGAGGATCCT
EY901146       <-- CATCAGCAAGAACCTTGGTAGCTTCAAGGGCTTCCCACATAGAGGATCCT
EV551266       <-- CATCAGCAAGAACCTTGGTAGCTTCAAGGGCTTCCCACATAGAGGATCCT
FD980341       <-- CATCAGCAAGAAC-TTGGTAGCTTCAAGGGCTTCCCACATAGAGGATC-T
FD557996       <-- ..................................................
EY937135       --> ..................................................
EY896525       --> ..................................................
EY911787       --> ..................................................
FY454258       --> ..................................................
FD976237       --> CATCAGCAAGAACCTTGGTAGCTTCAAGGGCTTCCCACATAGAGGATCCT
EX899336       --> CATCAGCAAGAACCTTGGTAGCTTCAAGGGCTTCCCACATAGAGGATCCT
EV546395       --> CATCAGCAAGAACCTTGGTAGCTTCAAGGGCTTCCCACATAGAGGATCCT
FY444826       --> CATCAGCAAGAACCTTGGTAGCTTCAAGGGCTTCCCACATAGAGGATCCT
EY942443       --> ..................................................

               751    -    801
UN20108        --> GAGGTTATCACAGCACAGACTACAGCACCAGCAGAAGCTCCTGCCAAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- GAGGTTATCACAGCACAGACTACAGCACCAGCAGAAGCTCCTGCCAAAGG
FY434695       <-- GAGGTTATCACAGCACAGACTACAGCACCAGCAGAAGCTCCTGCCAAAGG
EX765784       <-- GAGGTTATCACAGCAGAGACTACAGCACCAGCAGAAGCTCCTGCCAAAGG
EY946324       <-- GAGGTTATCACAGCACAGACTACAGCACCAGCAGAAGCTCCTGCCAAAGG
EY901146       <-- GAGGTTATCACAGCACAGACTACAGCACCAGCAGAAGCTCCTGCCAAAGG
EV551266       <-- GAGGTTATCACAGCACAGACTACAGCACCAGCAGAAGCTCCTGCCAAAGG
FD980341       <-- GAGGTTATCACAGCACAGACTACAGCACCAGCAGAAGCTCCTGCCAAAGG
FD557996       <-- GAGGTTATCACAGCACAGACTACAGCACCAGCAGAAGCTCCTGCCAAAGG
EY937135       --> ..................................................
EY896525       --> ..................................................
EY911787       --> ..................................................
FY454258       --> ..................................................
FD976237       --> GAG-TTATCACAGCACAGACTACAGCACCAGCAGAAGCTC-TGCCAAAG-
EX899336       --> GAGGTTATCACAGCACAGACTACAGCACCAGCAGAAGCTCCTG.......
EV546395       --> GAGGTTATCACAGCACAGACTACAGCACCAGCAGAAGCTCCTGCCAAAGG
FY444826       --> GAGGTTATCACAGCACAGACTACAGCACCAGCAGAAGCTCCTGCCAAAGG
EY942443       --> ..................................................

               801    -    851
UN20108        --> AGTAGTGTCCTTGATGTAACCCTTCTCGATGAGAAGCTGAGCAACACCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- AGTAGTGTCCTTGATGTAACCCTTCTCGATGAGAAGCTGAGCAACACCAA
FY434695       <-- AGTAGTGTCCTTGATGTAACCCTTCTCGATGAGAAGCTGAGCAACACCAA
EX765784       <-- AGTAGTGTCCTTGATGTAACCCTTCTCGATGAGAAGCTGAGCAACACCAA
EY946324       <-- AGTAGTGTCCTTGATGTAACCCTTCTCGATGAGAAGCTGAGCAACACCAA
EY901146       <-- GGTAGTGTCCTTGATGTAACCCTTCTCGATGAGAAGCTGAGCAACACCAA
EV551266       <-- AGTAGTGTCCTTGATGTAACCCTTCTCGATGAGAAGCTGAGCAACACCAA
FD980341       <-- AGTAGTGTCCTTGATGTAACCCTTCTCGATGAGAAGCTGAGCAACACCAA
FD557996       <-- AGTAGTGTCCTTGATGTAACCCTTCTCGATGAGAAGCTGAGCAACACCAA
EY937135       --> ..................................................
EY896525       --> ..................................................
EY911787       --> ..................................................
FY454258       --> ..................................................
FD976237       --> AGTAGTGTCCTTGATGTAACCCTTCTCGATGAGA-GCTGAGCA-CACCAA
EX899336       --> ..................................................
EV546395       --> AGTAGTGTCCTTGATGTAACCCTTCTCGATGAGAAGCTGAGCAACACCAA
FY444826       --> AGTAGTGTCCTTGATGTAACCCTTCTCGATGAGAAGCTGAGCAACACCAA
EY942443       --> ..................................................

               851    -    901
UN20108        --> GATGATAAGGGAACAAGAGACCAGCGGCAGAGAAGCTAAAACCAGGGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- GATGATAAGGGAACAAGAGACCAGCAGCAGAGAAGCTAGAACCAGGGCTT
FY434695       <-- GATGATAAGGGAACAAGAGACCAGCGGCAGAGAAGCTAAAACCAGGGCTT
EX765784       <-- GATGATAAGGGAACAAGAGACCAGCAGCAGAGAAGCTAAAACCAGGGCTT
EY946324       <-- GATGATAAGGGAACAAGAGACCAGCGGCAGAGAAGCTAAAACCAGGGCTT
EY901146       <-- GATGATAAGGGAACAAGAGACCAGCGGCAGAGAAGCTAAAACCAGGGCTT
EV551266       <-- GATGATAAGGGAACAAGAGACCAGCGGCGGAGAAGCTAAAACCAGGGCTT
FD980341       <-- GATGGTAAGGGAACAAGAGACCAGCGGCAGAGAAGCTAAAACCAGGGCTT
FD557996       <-- GATGGTAAGGGAACAAGAGACCAGCGGCAGAGAAGCTAAAACCAGGGCTT
EY937135       --> ..................................................
EY896525       --> ..................................................
EY911787       --> ..................................................
FY454258       --> ..................................................
FD976237       --> ..................................................
EX899336       --> ..................................................
EV546395       --> GATGA.............................................
FY444826       --> GATGATAAGGGAACAAGAGACCAGCGGCAGAGAAGCTAAAACCAGGGCTT
EY942443       --> ..................................................

               901    -    951
UN20108        --> GTAGTAATGACCCTCCTCTCTTTCTCAGCCTCTACGTCTTTAACCCTTT-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- GTAGTAATGACCCTCCTCTCTTTCTCAGCCTCTACGTCTTTAACCCTTT-
FY434695       <-- GTAGTAATGACCCTCCTCTCTTTCTCAGCCTCTACGTCTTTAACCCTTT-
EX765784       <-- GTAGTAATGACCCTCCTCTCTTTCTCAGCCTCTACGTCTTTAACCCTTT-
EY946324       <-- GTAGTAATGACCCTCCTCTCTTTCTCAGTCTCTACGTCTTTAACCCTTT-
EY901146       <-- GTAGTAATGACCCTCCTCTCTTTCTCAGCCTCTACGTCTTTAACCCTTT-
EV551266       <-- GTAGTAATGACCCTCCTCTCTTTCTCAGCCTCTACGTCTTTAACCCTTT-
FD980341       <-- GTAGTAATGACCCTCCTCTCTTTCTCAGCCTCTACGTCTTTAACCCTTT-
FD557996       <-- GTAGTAATGACCCTCCTCTCTTTCTCAGCCTCTACGTCTTTAACCCTTT-
EY937135       --> ..................................................
EY896525       --> ..................................................
EY911787       --> ..................................................
FY454258       --> ..................................................
FD976237       --> ..................................................
EX899336       --> ..................................................
EV546395       --> ..................................................
FY444826       --> GTAGTAATGACCCTCCTCTCTTTCTCAGCCTCTACGTCTTTAACCCTTTT
EY942443       --> ..................................................

               951    -   1001
UN20108        --> GTTCCCATATCATCGCTGGGTCAACCTCATCTTCAATTACTGTTCCTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- GTTCCCATATCATCGCTGGATCCACCTCATCTTCAATTACTGTTC---CT
FY434695       <-- GTTCCCATATCATCGCTGGATCAACCTCATCTTCGATTACTGTTCCTCCT
EX765784       <-- GTTCCCATATCATCGCTGGATCCACCTCATCTTCAATTACTGTTC---CT
EY946324       <-- GTTCCCATATCATCGCTGGATCAACCTCATCTTCGATTACTGTTCCTCCT
EY901146       <-- GTTCCCATATCATCGCTGGGTCAACCACATCTTCAATTACTGTTCCTCCT
EV551266       <-- GTTCCCATATCATCGCTGGGTCAACCTCATCTTCGATTACTGTTCCTCCT
FD980341       <-- GTTCCCATATCATCGCTGGGTCAACCACATCTTCAATTACTGTTCCTCCT
FD557996       <-- GTTCCCATATCATCGCTGGGTCAACCTCATCTTCAATTACTGTTCCTCCT
EY937135       --> ..................................................
EY896525       --> ..................................................
EY911787       --> ..................................................
FY454258       --> ..................................................
FD976237       --> ..................................................
EX899336       --> ..................................................
EV546395       --> ..................................................
FY444826       --> GTTCC-ATATCATC....................................
EY942443       --> ..................................................

               1001   -   1051
UN20108        --> ATTCTATCTCCATCATCATCGACCTCAGGCGTC---CGTTGATTGGACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- ATTCTATCTCCATCATCATCTACCc.........................
FY434695       <-- ATTCTATCTCCTTCATCATCGACCTCAGGCGTC---CGTTGATTGGACCT
EX765784       <-- ATTCTATCTCCATCATCATCTACCTCAGGCGTCGTCCGTTGATTGGACCT
EY946324       <-- ATTCTATCTCCTTCATCATCGACCTCAGGCGTC---CGTTGATTGGACCT
EY901146       <-- ATTCTATCTCCATCATCATCTACCTCAGGCGTC---CGTTGATTGGACCT
EV551266       <-- ATTCTATCTCCATCATCATCGACCTCAGGCGTC---CGTTGATTGGACCT
FD980341       <-- ATTCTATCTCCATCATCATCTACCTCAGGCGTC---CGTTGATTGGACCT
FD557996       <-- ATTCTATCTCCATCATCATCGACCTCAGGCGTC---CGTTGATTGGACCT
EY937135       --> ..................................................
EY896525       --> ..................................................
EY911787       --> ..................................................
FY454258       --> ..................................................
FD976237       --> ..................................................
EX899336       --> ..................................................
EV546395       --> ..................................................
FY444826       --> ..................................................
EY942443       --> ..................................................

               1051   -   1101
UN20108        --> CTTCAAAAGCCTCGACGCGAGTCCGATGAACTTCTCACCGGTTGCAACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- ..................................................
FY434695       <-- CTTCAAAAGCCTCGAGGCGAGTCCGATGAACTTCTCACCGGTTGCAACAG
EX765784       <-- TTTCAAAAGCCTCGACGCGACTCCGATGAACATCTCACCGGTTGCAACAG
EY946324       <-- CTTCAAAAGCCTCGAGGCGAGTCCGATGAACTTCTCACCGGTTGCAACAG
EY901146       <-- CTTCAAAAGCCTCGACGCGAGTCCGATGAACTTCTCACCGGTTGCAACAG
EV551266       <-- CTTCAAAAGCCTCGACGCGAGTCCGATGAACTTCTCACCGGTTGCAACAG
FD980341       <-- CTTCAAAAGCCTCGACGCGAGTCCGATGAACTTCTCACCGGTTGCAACAG
FD557996       <-- TTTCAAAAGCCTCGACGCGAGTCCGATGAACTTCTCACCGGTTGCAACAG
EY937135       --> ..................................................
EY896525       --> ..................................................
EY911787       --> ..................................................
FY454258       --> ..................................................
FD976237       --> ..................................................
EX899336       --> ..................................................
EV546395       --> ..................................................
FY444826       --> ..................................................
EY942443       --> ..................................................

               1101   -   1151
UN20108        --> CGAATGATCTCTTCTCTGGAATATTCGAAGAACATGATAGCCTAAGGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- ..................................................
FY434695       <-- CGAATGATCTCTTCTCTGGAATATTCGAAGAACATGATAGCCTAAGGGAG
EX765784       <-- CGAATGATCTCTTCTCTGGAATATTCGAAGAACATGATAGCCTAAGGGAG
EY946324       <-- CGAATGATCTCTTCTCTGGAATATTCGAAGAACATGATAGCCTAAGGGAG
EY901146       <-- CGAATGATCTCTTCTCTGGAATATTCGAAGAACATGATAGCCTAAGGGAG
EV551266       <-- CGAATGATCTCTTCTCTGGAATATTCGAAGAACATGATAGCCTAAGGGAG
FD980341       <-- CGAATGATCTCTTCTCTGGAATATTCGAAGAACATGATAGCCTAAGGGAG
FD557996       <-- CGAATGATCTCTTCTCTGGAATATTCGAAGAACATGATAGCCTAAGGGAG
EY937135       --> ..................................................
EY896525       --> ..................................................
EY911787       --> ..................................................
FY454258       --> ..................................................
FD976237       --> ..................................................
EX899336       --> ..................................................
EV546395       --> ..................................................
FY444826       --> ..................................................
EY942443       --> ..................................................

               1151   -   1201
UN20108        --> AGAACCCTGGGTGAAAGGTTGAAGCTTTTGCTTGTACGGAGCGAGATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- ..................................................
FY434695       <-- AGAACCCTGGGTGAAAGGTTGAAGCTTTTGCTTGTACGGAGCGAGATGAA
EX765784       <-- AGAACCCTGGGTGAAAGGTTGAAGCTTTTGCTTGTACGGAGCGAGATGAA
EY946324       <-- AGAACCCTGGGTGAAAGGTTGAAGCTTTTGCTTGTACGGAGCGAGATG..
EY901146       <-- AGAACCCTGGGTGAAAGGTTGAAGCTTTTGCTTGTACGGAGCGAAATAAA
EV551266       <-- AGAACCCTGGGTGAAAGGTTGAAGCTTTTGCTTGTAGGGAACGAGATGAA
FD980341       <-- AGAACCCTGGGTGAAAGGTTGAAGCTTTTGCTTGTACGGAGCGAAATAAA
FD557996       <-- AGAACCCTGGGTGAAAGGTTGAAGCTTTTGCTTGTACGGAGCGAGATGAA
EY937135       --> ..................................................
EY896525       --> ..................................................
EY911787       --> ..................................................
FY454258       --> ..................................................
FD976237       --> ..................................................
EX899336       --> ..................................................
EV546395       --> ..................................................
FY444826       --> ..................................................
EY942443       --> ..................................................

               1201   -   1251
UN20108        --> GGGTCTGGGAAGAAGAGAGATCGCCATGGTCATGGAGTGAAGGGTCACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- ..................................................
FY434695       <-- GGGTCTGGGAAGAAGAGAGATCGC------CATGGAGTGAAGGGTCACAC
EX765784       <-- GGGTCTGGGAGGAAGAGAGATCGCCATGGagtgaagggtcacactctcc.
EY946324       <-- ..................................................
EY901146       <-- GGGTCTGGGAAGAAGAGAGATCGCCATGGTCATGGAGTGAAGGGTCACAC
EV551266       <-- GGGTCTGGGAAGAAGAGAGATCGCCATGGTCATGGAGTGAAGGGTCACAC
FD980341       <-- GGGTCTGGGAAGAAGAGAGATCGCCATGGTCATGGAGTGAAGGGTCACAC
FD557996       <-- GGGTCTGGGAAGAAGAGAGATCGCCATGGTCATGGAGTGAAGGGTCACAC
EY937135       --> ..................................................
EY896525       --> ..................................................
EY911787       --> ..................................................
FY454258       --> ..................................................
FD976237       --> ..................................................
EX899336       --> ..................................................
EV546395       --> ..................................................
FY444826       --> ..................................................
EY942443       --> ..................................................

               1251   -   1301
UN20108        --> TCTGACTATTGTTTCGCAATTTCGAAAGTTGAGAATTTGATCATCGCAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- ..................................................
FY434695       <-- TCTGACTATTGTTTCGCAATTTCGAAAGTTGAGAAT..............
EX765784       <-- ..................................................
EY946324       <-- ..................................................
EY901146       <-- TCTGACTATTGTTTCGCAATTTCGAAAGTTGAGAATTTGATCATCGCAGT
EV551266       <-- TCTGATTATTATTTCGCAATTTCGAAAGTTGAGAATTTGATCATCGCAGT
FD980341       <-- TCTGACTATTGTTTCGCAATTTCGAAAGTTGAGAATTTGATCATCGCAGT
FD557996       <-- TCTGATTATTATTTCGCAATTTCGAAAGTTGAGAATTTGATCATCGCAGT
EY937135       --> ..................................................
EY896525       --> ..................................................
EY911787       --> ..................................................
FY454258       --> ..................................................
FD976237       --> ..................................................
EX899336       --> ..................................................
EV546395       --> ..................................................
FY444826       --> ..................................................
EY942443       --> ..................................................

               1301   -   1351
UN20108        --> CGCAGCTAACAAGAGAGTCGTGAGGATGAGCGTAACCGAGGTTTCGTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- ..................................................
FY434695       <-- ..................................................
EX765784       <-- ..................................................
EY946324       <-- ..................................................
EY901146       <-- CGCAGCTAACAAGAGAGTCGTGAGGATGAGCGTcccct............
EV551266       <-- CGCAGCTAACAAGAGAGTCGTGAGGATGAGCGTAACCcc...........
FD980341       <-- CGCAGCTAACAAGAGAGTCGTGAGGATGAGCGTAACCGAGGTTTCGTGGC
FD557996       <-- CGCAGCTAACAAGAGAGTCGTGAGGATGAGCGTAACCcc...........
EY937135       --> ..................................................
EY896525       --> ..................................................
EY911787       --> ..................................................
FY454258       --> ..................................................
FD976237       --> ..................................................
EX899336       --> ..................................................
EV546395       --> ..................................................
FY444826       --> ..................................................
EY942443       --> ..................................................

               1351   -   1401
UN20108        --> TAATTTGGTTGCCTTATAAATGCAAATTTTACAGAATATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916049       <-- .........................................
FY434695       <-- .........................................
EX765784       <-- .........................................
EY946324       <-- .........................................
EY901146       <-- .........................................
EV551266       <-- .........................................
FD980341       <-- TAATTTGGTTGCCTTATAAATGCAAATTTTACAGAATATCC
FD557996       <-- .........................................
EY937135       --> .........................................
EY896525       --> .........................................
EY911787       --> .........................................
FY454258       --> .........................................
FD976237       --> .........................................
EX899336       --> .........................................
EV546395       --> .........................................
FY444826       --> .........................................
EY942443       --> .........................................