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Alignment for radish unigene UN20111

               1      -     51
UN20111        --> GGGAAAATGGTCGTCTCTGCTGACTTCAGAATCTCTCTCTCTGCCCCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- ..................................................
EY936450       <-- ..................................................
EY917828       <-- ..................................................
EV540552       <-- ..................................................
EY940733       --> GGGAAAATGGTCGTCTCTGCTGACTTCAGAATCTCTCTCTCTGCCCCTAG
EV536012       --> ..................................................
EY921738       --> ..................................................
EV547892       --> ..................................................

               51     -    101
UN20111        --> CTGCCTACGCGGCTCCTCTGGCTTCACCAGGCACATTAATCTAGGGAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- ..................................................
EY936450       <-- ..................................................
EY917828       <-- ..................................................
EV540552       <-- ..................................................
EY940733       --> CTGCCTACGCGGCTCCTCTGGCTTCACCAGGCACATTAATCTAGGGAGCT
EV536012       --> ..................................................
EY921738       --> ..................................................
EV547892       --> ..................................................

               101    -    151
UN20111        --> TCTGCAATGGGGAGTTCATGGGGAAGAAGCTCAACTTGGCTCAGCTTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- ..................................................
EY936450       <-- ..................................................
EY917828       <-- ..................................................
EV540552       <-- ..................................................
EY940733       --> TCTGCAATGGGGAGTTCATGGGGAAGAAGCTCAACTTGGCTCAGCTTCGA
EV536012       --> ..................................................
EY921738       --> ..................................................
EV547892       --> ..................................................

               151    -    201
UN20111        --> TCTTCTTCAACTAACTTCTCTCAGAAGAGAATTCAAATGTCTTTAACCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- ..................................................
EY936450       <-- ..................................................
EY917828       <-- ..................................................
EV540552       <-- ..................................................
EY940733       --> TCTTCTTCAACTAACTTCTCTCAGAAGAGAATTCAAATGTCTTTAACCAG
EV536012       --> ..................................................
EY921738       --> ..................................................
EV547892       --> ..................................................

               201    -    251
UN20111        --> TGTAGCTGCAGACAGTAAGGTACAAGAAATTGAGTCTGAGAAAAGGGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- ..................................................
EY936450       <-- ..................................................
EY917828       <-- ..................................................
EV540552       <-- ..................................................
EY940733       --> TGTAGCTGCAGACAGTAAGGTACAAGAAATTGAGTCTGAGAAAAGGGATC
EV536012       --> ..................................................
EY921738       --> ..................................................
EV547892       --> ..................................................

               251    -    301
UN20111        --> CAAGGACAGTAGCTTCCATTATTCTTGGAGGTGGAGCAGGAACTCGACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- ..................................................
EY936450       <-- ..................................................
EY917828       <-- ..................................................
EV540552       <-- ..................................................
EY940733       --> CAAGGACAGTAGCTTCCATTATTCTTGGAGGTGGAGCAGGAACTCGACTC
EV536012       --> ..................................................
EY921738       --> ..................................................
EV547892       --> ..................................................

               301    -    351
UN20111        --> TTTCCTCTCACAAAGCGTCGCGCCAAGCCTGCTGTCCCTATCGGAGGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- ..................................................
EY936450       <-- ..................................................
EY917828       <-- ..................................................
EV540552       <-- ..................................................
EY940733       --> TTTCCTCTCACAAAGCGTCGCGCCAAGCCTGCTGTCCCTATCGGAGGAGC
EV536012       --> .gTCCTCTCACAAAGCGTCGCGCCAAGCCTGCTGTCCCTATCGGAGGAGC
EY921738       --> ..................................................
EV547892       --> ..................................................

               351    -    401
UN20111        --> TTATAGGCTGATAGATGTACCTATGAGCAACTGCATCAACAGTGGAATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- ..................................................
EY936450       <-- ..................................................
EY917828       <-- ..................................................
EV540552       <-- ..................................................
EY940733       --> GTATAGGCTGATAGATGTACCGATGAGCAACTGCATCAACAGTGGAATCA
EV536012       --> TTATAGGCTGATAGATGTACCTATGAGCAACTGCATCAACAGTGGAATCA
EY921738       --> ..................................................
EV547892       --> ..................................................

               401    -    451
UN20111        --> ACAAAGTCTACATTCTCACACAATACAACTCAGCATCACTGAACAGGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- ..................................................
EY936450       <-- ..................................................
EY917828       <-- ..................................................
EV540552       <-- ..................................................
EY940733       --> ACAAAGTCTACATTCTCACACAATACAACTCAGCATCACTGAACAGGCAT
EV536012       --> ACAAAGTCTACATACTCACACAATACAACTCAGCATCACTGAACAGGCAT
EY921738       --> ..................................................
EV547892       --> ..................................................

               451    -    501
UN20111        --> CTAGCTCGTGCTTACAACTCCAATGGAGGTTTTGGAGATGGCTTTGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- ..................................................
EY936450       <-- ..................................................
EY917828       <-- ..................................................
EV540552       <-- ..................................................
EY940733       --> CTAGCACGTGCTTACAACTCCAATGGAGGTTTTGGAGATGGCTTTGTTGA
EV536012       --> CTAGCTCGTGCTTACAACTCCAATGGAGGTTTTGGAGATGGCTTTGTTGA
EY921738       --> ..................................................
EV547892       --> ..................................................

               501    -    551
UN20111        --> GGCTCTTGCAGCCACTCAAACGCCAGGAGAAACAGGTAAAAAGTGGTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- ..................................................
EY936450       <-- ..................................................
EY917828       <-- ..................................................
EV540552       <-- ..................................................
EY940733       --> GGCTCTTGCAGCCACTCAAACGCCAGGAGAAACAGGTAAAAAGTGGTTCC
EV536012       --> GGCTCTTGCAGCAACTCAAACGCCAGGAGAAACAGGTAAAAAGTGGTTCC
EY921738       --> ..................................................
EV547892       --> ..................................................

               551    -    601
UN20111        --> AAGGTACAGCAGATGCGGTTCGGCAGTTCCATTGGCTTTTCGAGGATGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- ..................................................
EY936450       <-- ..................................................
EY917828       <-- ..................................................
EV540552       <-- ..................................................
EY940733       --> AAAGTACAGCAGATGCGGTTCGGCAGTTCCATTGGCTTTTCGAGGATGCA
EV536012       --> AAGGTACAGCAGATGCGGTTCGGCAGTTCCATTGGCTTTTCGAGGATGCA
EY921738       --> ..................................................
EV547892       --> ..................................................

               601    -    651
UN20111        --> AGAAGCAAGGAGATAGAGGATGTGTTGATCCTCTCTGGTGATCACCTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- ..................................................
EY936450       <-- ..................................................
EY917828       <-- ..................................................
EV540552       <-- ..................................................
EY940733       --> A.................................................
EV536012       --> AGAAGCAAGGAGATAGAGGATGTGTTGATCCTCTCTGGTGATCACCTTTA
EY921738       --> ..................................................
EV547892       --> ..................................................

               651    -    701
UN20111        --> CAGGATGGATTATATGGATTTTGTACAGGATCATCGACAAAGCGGTGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- ..................................................
EY936450       <-- ..................................................
EY917828       <-- ..................................................
EV540552       <-- ..................................................
EY940733       --> ..................................................
EV536012       --> CAGGATGGATTATATGGATTTTGTACAGGATCATCGACAAAGCGGTGCAG
EY921738       --> ..................................................
EV547892       --> ..................................................

               701    -    751
UN20111        --> ATATAAGCATTTCTTGCATACCAATAGATGACAGACGTGCCTCAGATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- ..................................................
EY936450       <-- ..................................................
EY917828       <-- ..................................................
EV540552       <-- ..................................................
EY940733       --> ..................................................
EV536012       --> ATATAAGCATTTCTTGCATACCAATAGATGACAGACGTGCCTCAGATTTT
EY921738       --> ..................................................
EV547892       --> ..................................................

               751    -    801
UN20111        --> GGTCTAATGAAGATAGATGAGAAAGGAAGAGTTATCTCTTTCAGTGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- ..................................................
EY936450       <-- ..................................................
EY917828       <-- ..................................................
EV540552       <-- ..................................................
EY940733       --> ..................................................
EV536012       --> GGTCTAATGAAGATAGATGAGAAAGGAAGAGTTATCTCTTTCAGTGAAAA
EY921738       --> ..................................................
EV547892       --> ..................................................

               801    -    851
UN20111        --> ACCTAAAGGAGGTGACCTGAAAGCAATGGCTGTAGACACAACTGTTCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- ...........GTGAC-TGAAAGCAATGGCTGTAGACACAACTGTTCTAG
EY936450       <-- ..................................................
EY917828       <-- ..................................................
EV540552       <-- ..................................................
EY940733       --> ..................................................
EV536012       --> ACCTAAAGGAGATGACCTGAAAGCAATGGCTGTAGACACAACTGTTCTAG
EY921738       --> ..gTAAAGGAGGTGACCTGAAAGCAATGGCTGTAGACACAACTGTTCTAG
EV547892       --> ...........gaGACCTGAAAGCAATGGCTGTAGACACAACTGTTCTAG

               851    -    901
UN20111        --> GTCTTTCCAAGGAGGAAGCTGAAAAGAAACCATACATTGCGTCAATGGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- GTCTTTCCAAGGAGGAAGCTGAAAAGAAACCATACATTGCGTCAATGGGA
EY936450       <-- ...................TGAAAAGAAACCATACATTGCGTCAATGGGG
EY917828       <-- ..................................................
EV540552       <-- ..................................................
EY940733       --> ..................................................
EV536012       --> GTCTTTCCAAGGAGGAAGCTGAAAAGAAACCACACATAGCGTCAATGGGG
EY921738       --> GTCTTTCCAAGGAGGA-GCTGAAAAGAAACCATACATTGCGTCAATGGGG
EV547892       --> GTCTTTCCAAGGAGGAAGCTGAAAAGAAACCATACATTGCGTCAATGGGA

               901    -    951
UN20111        --> GTTTATGTTTTCAAGAAAGAGATACTGTTGAATCTCTTGAGATGGCGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- GTTTATGTTTTCAAGAAAGAGATACTGTTGAATCTCTTGAGATGGCGTTT
EY936450       <-- GTTTATGTTTTCAAGAAAGAGATACTGTTGAATCTCTTGAGATGGCGTTT
EY917828       <-- ..................................................
EV540552       <-- ..................................................
EY940733       --> ..................................................
EV536012       --> GTTTATGTTTTCAAGAAAGAGATACTGTTGAATCTCTTGAGATGGCGTTT
EY921738       --> GTTTATGTTTTCAAGAAAGAGATACTGTTGAATCTCTTGAGATGGCGTTT
EV547892       --> GTTTATGTTTTCAAGAAAGAGATACTGTTGAATCTCTTGAGATGGCGTTT

               951    -   1001
UN20111        --> CCCAACGGCAAATGACTTTGGCTCAGAGATTATACCCTTCTCAGCTAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- CCCAACGGCAAATGACTTTGGCTCAGAGATTATACCCTTCTCAGCTAAAG
EY936450       <-- CCCAACAGCAAATGACTTTGGCTCAGAGATTATACCCTTCTCAGCTAAAG
EY917828       <-- ........................................TCAGCTAAAG
EV540552       <-- ..................................................
EY940733       --> ..................................................
EV536012       --> CCCAACGGCAAATGACTTTGGCTCAGAGATTATACCCTTCTCAGCTAAAG
EY921738       --> CCCAACAGCAAATGACTTTGGCTCAGAGATTATACCCTTCTCAGCTAAAG
EV547892       --> CCCAACGGCAAATGACTTTGGCTCAGAGATTATACCCTTCTCAGCTAAAG

               1001   -   1051
UN20111        --> AGTTCTATGTAAATGCTTATCTCTTTAATGACTACTGGGAAGATATAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- AGTTCTATGTAAATGCTTATCTCTTTAATGACTACTGGGAAGATATAGGA
EY936450       <-- AGTTCTATGTAAATGCTTATCTCTTTAATGACTACTGGGAAGATATAGGA
EY917828       <-- AGTTCTATGTAAATGCTTATCTCTTTAATGACTACTGGGAAGATATAGGA
EV540552       <-- ..........................AATGACTACTGGGAAGATATAGGA
EY940733       --> ..................................................
EV536012       --> AGTTCTACGTAAATGCTTATCTTTTTAATGACTACTGGGAAGAT......
EY921738       --> AGTTCTATGTAAATGCTTATCTCTTTAATGACTACTGGGAAGATATAGGA
EV547892       --> AGTTCTATGTAAATGCTTATCTCTTTAATGACTACTGGGAAGATATAGGA

               1051   -   1101
UN20111        --> ACGATAAGATCATTCTTTGACGCAAATCTCGCCCTCACTGAGCATCCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- ACGATAAGATCATTCTTTGACGCAAATCTCGCCCTCACTGAGCATCCACC
EY936450       <-- ACGATAAGATCATTCTTTGACGCAAATCTCGCCCTCGCTGAGCATCCACC
EY917828       <-- ACGATAAGATCATTCTTTGACGCAAATCTCGCCCTCACTGAGCACCCACC
EV540552       <-- ACAATAAGATCATTCTTTGACGCAAATCTCGCCCTCACTGAGCATCCACC
EY940733       --> ..................................................
EV536012       --> ..................................................
EY921738       --> ACGATAAGATCATTCTTTGACGCAAATCTCGCCCTCACTGAGCACCCACC
EV547892       --> ACGATAAGATCATTCTTTGACGCAAATCTCGCCCTCACTGAGCATCCACC

               1101   -   1151
UN20111        --> TGCATTCAGTTTCTACGACGCAGCAAAGCCAATATATACATCAAGGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- TGCATTCAGTTTTTACGACGCAGCAAAGCCAATATATACATCAAGGAGGA
EY936450       <-- TGCATTCAGTTTCTACGACGCAGCAAAGCCAATATATACATCAAGGAGGA
EY917828       <-- TGCATTCAGTTTCTACGACGCAGCAAAGCCAATATATACATCAAGGAGGA
EV540552       <-- TGCATTCAGTTTTTACGACGCAGCAAAGCCAATATATACATCAAGGAGGA
EY940733       --> ..................................................
EV536012       --> ..................................................
EY921738       --> TGCATTCAGTTTCTACGACGCAGCAAAGCCAATATATACATCAAGGAGGA
EV547892       --> TGCATTCAGTTTCTACGACGCAGCAAAGCCAATATATACATCAAGGAGGA

               1151   -   1201
UN20111        --> ACCTGCCACCATCAAAAATAGACGGCTCCAAGCTCATTGATTCGATCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- -CCTGCCACCATCAAAAATAGACGGATCTAAGCTCATTGATTCGATCATT
EY936450       <-- ACCTGCCACCATCAAAA-TAGACGGCTCCAAGCTCATTGATTCGATCATT
EY917828       <-- ACCTGCCACCATCAAAAATAGACGGCTCCAAGCTCATTGATTCGATCATT
EV540552       <-- ACCTGCCACCATCAAAAATAGACGGCTCCAAGCTCATTGATTCGATCATT
EY940733       --> ..................................................
EV536012       --> ..................................................
EY921738       --> ACCTGCCACCATCAAAAATAGACGGCTCCAAGCTCATTGATTCGATCATT
EV547892       --> -CCTGCCACCATCAAAAATAGACGGATCTAAGCTCATTGATTCGATCATT

               1201   -   1251
UN20111        --> TCTCATGGAAGCTTCTTAACCAACTGCTTAATTGAGCACAGCATTGTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- TCTCATGGAAGCTTCTTAACCAACTGCTTAATTGAGCACAGCATTGTGGG
EY936450       <-- TCTCATGGAAGCTTCTTAACCAACTGCTTAATTGAGCATAGCATTGTGGG
EY917828       <-- TCTCATGGAAGCTTCTTAACCAACTGCTTAATTGAGCACAGCATTGTGGG
EV540552       <-- TTTCATGGAAGCTTTTTAACCAACTGCTTAATTGAGCATATCATTGTGGG
EY940733       --> ..................................................
EV536012       --> ..................................................
EY921738       --> TCTCATGGAAGCTTCTTAACCAACTGCTTAATTGAGCACAGCATTGTGGG
EV547892       --> TCTCATGGAAGCTTCTTAACCAACTGCTTAATTGAGCACAGCATTGTGGG

               1251   -   1301
UN20111        --> AATTAGATCAAGAGTAGGCAGTAATGTTCAGTTGAAGGACACTGTGATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- AATTAGATCAAGAGTAGGCAGTAATGTTCAGTTGAAGGACACTGTGATGC
EY936450       <-- AATTAGATCAAGAGTGGGAAGTAATGTTCAGTTGAAGGACACTGTGATGC
EY917828       <-- AATTAGATCAAGAGTAGGCAGTAATGTTCAGTTGAAGGACACTGTGATGC
EV540552       <-- AATTAGATCAAGAGTAGGCAGTAATGTTCAGTTGAAGGACACTGTGATGC
EY940733       --> ..................................................
EV536012       --> ..................................................
EY921738       --> AATTAGATCAAGAGTAGGCAGTAATGTTCAGTTGAAGGACACTGTGATGC
EV547892       --> AATTAGATCAAGAGTAGGCAGTAATGTTCAGTTGAAGGACACTGTGATGC

               1301   -   1351
UN20111        --> TTGGGGCAGACTTCTACGAAACTGAAGCAGAAGTTGCAGCACTACTTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- TTGGGGCCGACTTTTACGAAACTGAAGCAGAAGTTGCAGCACTACTTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936450       <-- TTGGGGCAGACTTCTACGAAACTGAAGCAGAAGTTGCAGCACTACTAGCT  Raphanus sativus cv Early Scarlet Globe
EY917828       <-- TTGGGGCAGACTTCTACGAAACTGAAGCAGAAGTTGCAGCACTACTAGCT  Raphanus raphanistrum subsp. landra
EV540552       <-- TTGGGGCAGACTTCTACGAAACTGAAGCAGAAGTTGCAGCACTACTTGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY940733       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV536012       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY921738       --> TTGGGGCAGACTTCTACGAAACTGAAGCAGAAGTTGCAGCACTACTAGCT  Raphanus raphanistrum subsp. landra
EV547892       --> TTGGGGCCGACTTTTACGAAACTGAAGCAGAAGTTGCAGCACTACTTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)

               1351   -   1401
UN20111        --> GAAGGAAAAGTTCCCATTGGAATAGGAGAGAACACAAAGATTAAAGAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- GAAGGAAAAGTTCCCATTGGAATAGGAGAGAACACAAAGATTAAAGAATG
EY936450       <-- GAAGGAAAAGTTCCCATTGGGATAGGAGAGAACACAAAGATTAAAGAATG
EY917828       <-- GAAGGAAAAGTTCCCATTGGAATAGGAGAGAACACAAAGATTAAAGAATG
EV540552       <-- GAAGGAAAAGTTCCCATTGGAATAGGAGAGAACACAAAGATTAAAGAATG
EY940733       --> ..................................................
EV536012       --> ..................................................
EY921738       --> GAAGGAAAAGTTCCCATTGGAATAGGAGAGAACACAAAGATTAA-GAATG
EV547892       --> GAAGGAAAAGTTCCCATTGGAATAGGAGAGAACACAAAGATTAAAGAATG

               1401   -   1451
UN20111        --> CATTATAGACAAGAATGCTAGAGTTGGGAAGAATGTAGTTATCGCAAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- CATTATAGACAAGAATGCTAGAGTTGGGAAGAATGTAGTTATCGCAAACT
EY936450       <-- CATTATAGACAAGAATGCTAGAGTTGGGAAGAATGTAGTTATCGCAAACT
EY917828       <-- CATTATAGACAAGAATGCTAGAGTTGGGAAGAATGTAGTTATCGCAAACT
EV540552       <-- CATTATAGACAAGAATGCTAGAGTTGGGAAGAATGTAGTTATCGCAAACT
EY940733       --> ..................................................
EV536012       --> ..................................................
EY921738       --> CATTATAGACAAGAATGCTAGAGTTGGGAAGAATGTAGTTATCGCAAACT
EV547892       --> CATTATAGACAAGAATGCTAGAGTTGGGAAGAATGTAGTTATCGCAAACT

               1451   -   1501
UN20111        --> CGGAGGGAGTACAAGAAGCAGATAGGTCATCCGATGGGTTTTACATCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- CGGAGGGAGTACAAGAAGCAGGTAGGTCATCCGATGGGTTTTACATCAGA
EY936450       <-- CGGAGGGAGTACAAGAAGCAGATAGGTCATCCGATGGGTTTTACATCAGA
EY917828       <-- CGGAGGGAGTACAAGAAGCAGATAGGTCATCCGATGGGTTTTACATCAGA
EV540552       <-- CGGAGGGAGTACAAGAAGCAGATAGGTCGTCCGATGGGTTTTACATCAGA
EY940733       --> ..................................................
EV536012       --> ..................................................
EY921738       --> CGGAGGGAGTACAAGAAGCAGA............................
EV547892       --> CGGAGGGAGTACAAGAAGCAGGTAGGTCATCCGATGGGTTTTACATCAGA

               1501   -   1551
UN20111        --> TCAGGCATCACAGTGATCTTGAAGAACTCAGTAATTGCAGATGGAGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- TCAGGCATCACAGTGATCTTGAAGAACTCAGTAATTGCAGATGGAGTTGT
EY936450       <-- TCAGGCATCACAGTGATCTTGAAGAACTCAGTAATTGCAGATGGAGTTGT
EY917828       <-- TCAGGCATCACAGTGATCTTGAAGAACTCAGTAATTGCAGATGGAGTTGT
EV540552       <-- TCAGGCATAACAGTGATCTTGAAGAACTCAGTAATTGCAGATGGAGTTGT
EY940733       --> ..................................................
EV536012       --> ..................................................
EY921738       --> ..................................................
EV547892       --> TCAG-CATCACAGTGATCTTGAAGAACTCAGTAATTGCAGATGGAGTTGT

               1551   -   1601
UN20111        --> GATCTGAGACTTTTT-AAGTTTTTAAAATTGTGAGAACTAAGAATTCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- GATCTGAGACTTTTT-AAGTTTTTAAAATTGTGAGAACTAAGAATTCAGA
EY936450       <-- GATATGAGACTTTTT-AAGT---TTAAATTGTGAGAACTAAGAATTCAGA
EY917828       <-- GATATGAGACTTTTTTAAGTTTTTAAAATTGTGAGAACTAAGAATTCAAA
EV540552       <-- GATTTGAGACTTTTT-AAGTTTTTAAAATTGTGAGAACTAAGAATTCAAA
EY940733       --> ..................................................
EV536012       --> ..................................................
EY921738       --> ..................................................
EV547892       --> GATCTGAGACTTTTT-AAGTTTTTAAAATTGTGAGAACTAAGAATTCAGA

               1601   -   1651
UN20111        --> GCAGAAAAAGTCAAAACTATATTAATAAAGCATTTATTTGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV543676       <-- GCAGAAAAAGTCAAAACTATATTAATAA...............
EY936450       <-- GCAGAGAAAGTCAAAACTATATTAATA................
EY917828       <-- GCGGAAAAAGTCAAAACTATATTttaatca.............
EV540552       <-- GCAGAAAAAGTCAAAACTATATTttaatca.............
EY940733       --> ...........................................
EV536012       --> ...........................................
EY921738       --> ...........................................
EV547892       --> GCAGAAAAAGTCAAAACTATATTAATAAAGCATTTATTTGGTA