1      -     51
UN20175        --> AGCCAATGGAGACAAGTTTTGTAATAACAAAATAAAAAGACTCAATACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566318       <-- ..................................................
EX770340       <-- ..................................................
FD549590       <-- ..................................................
EX764620       <-- ..................................................
EX746721       <-- ..................................................
EX763665       <-- ..................................................
EX751055       --> AGCCAATGGAGACAAGTTTTGTAATAAGAAAATAAAAAGACTCAATACAC
EX768504       --> .......GGAGACAAGTTTTGTAATAACAAAATAAAAAGACTCAATACAC
EV571477       --> ......ctGAGACAAG-CTTGTAATAACAAAATAAAAAGACTTAGTACAC
EX774550       --> ..................................................
EX751582       --> ..................................................

               51     -    101
UN20175        --> AAATCTACACGAGTATTCATGAAACATTAACTTAGCAAAGAGAAAACCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566318       <-- ..................................................
EX770340       <-- ..................................................
FD549590       <-- ..................................................
EX764620       <-- ..................................................
EX746721       <-- ..................................................
EX763665       <-- ..................................................
EX751055       --> AAATCTACACGAGTATTCATGAAACATTAACTTAGCAAAGAGAAAACCAT
EX768504       --> AAATCTACACGAGTATTCATGAAACATTAACTTAGCAAAGAGAAAACCAT
EV571477       --> AGATCTACATGAGTATTCATAAAACATTAACTTAGCAAAGAGAAAACCAT
EX774550       --> ......gCACGAGTATTCATGAAACATTAACTTAGCAAAGAGAAAACCAT
EX751582       --> .....................AAACATTAACTTAGCAAAGAGAAAACCAT

               101    -    151
UN20175        --> GATCCATTGTTCTTACAAAAAAAA-GAAACAAAGATAAGGAAATTGATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566318       <-- ..................................................
EX770340       <-- ..................................................
FD549590       <-- ..................................................
EX764620       <-- ..................................................
EX746721       <-- ..................................................
EX763665       <-- ..................................................
EX751055       --> GATCCATTGTTCTTACAAAAAAAAAGAAACAAAGATAAGGAAATTGATTT
EX768504       --> GATCCATTGTTCTTACAAAAAAAA-GAAACAAAGATAAGGAAGTTGATTT
EV571477       --> GATCCATTGTTCTTACAAAAAAA--GAAACAAAGATAAGGAAGTTGATTT
EX774550       --> GATCCATTGTTCTTACAAAAAAAA-GAAACAAAGATAAGGAAATTGATTT
EX751582       --> GATCCATTGTTCTTACAAAAAAAAAGAAACAAAGATAAGGAAATTGATTT

               151    -    201
UN20175        --> TAGTCATACTTCTTGAACCCAAACTTTCCACTTGGGATTCGACTGAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566318       <-- ..................................................
EX770340       <-- ..................................................
FD549590       <-- ..................................................
EX764620       <-- ..................................................
EX746721       <-- ..................................................
EX763665       <-- ..................................................
EX751055       --> TAGTCATACTTCTTGAACCCAAACTTTCCACTTGGGATTCGACTGAGAAA
EX768504       --> TAGTCATACTTCTTGAACCCAAACTTTCCACTTGGGATTCGACTGAGAAA
EV571477       --> TAGTCATACTTCTTGAACCCAAACTTTCCACTTGGGATTCGACTGAGAAA
EX774550       --> TAGTCATACTTCTTGAACCCAAACTTTCCACTTGGGATTCGACCGAGAAA
EX751582       --> TAGTCATACTTCTTGAACCCAAACTTTCCACTTGGGATTCGACTGAGAAA

               201    -    251
UN20175        --> ACCAGTATCAATCTTCTTGTAGTGACTATGAAACTTCATGAGCAGAGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566318       <-- ..............TCTTGTAGTGACTATGAAACTTCATGAGCAGAGAAT
EX770340       <-- ..................................................
FD549590       <-- ..................................................
EX764620       <-- ..................................................
EX746721       <-- ..................................................
EX763665       <-- ..................................................
EX751055       --> ACCAGTATCAATCTTCTTGTAGTGACTATGAAACTTCATGAGCAGAGAAT
EX768504       --> ACCAGTATCAATCTTCTTGTAGTGACTATGAAACTTCATAAGCAGAGAAT
EV571477       --> ACCAGTATCAATCTTCTTGTAGTGACTATGAAACTTCATGAGCAGAGAAT
EX774550       --> ACCAGTATCAATCTTCTTGTAGTGACTATGAAACTTCATGAGCAGAGAAT
EX751582       --> ACCAGTATCAATCTTCTTGTAGTGACTATGAAACTTCATGAGCAGAGAAT

               251    -    301
UN20175        --> CAACAAAGCCATCAACTTCGTCTTCATATCTCTCATACAGAACCGGCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566318       <-- CAACAAAACCATCAACTTCGTCTTCATATCTCTCATACAGAACCGGCATT
EX770340       <-- .........................ATATCTCTCATACAGA-CCGGCATT
FD549590       <-- ..................................................
EX764620       <-- ..................................................
EX746721       <-- ..................................................
EX763665       <-- ..................................................
EX751055       --> CAA-AAAGCCATCAACTTCGTCTTCATATCTCTCATACAGAACCGGCATT
EX768504       --> CAACAAAACCATCAACTTCGTCTTCATATCTCTCATACAGAACCGGCATT
EV571477       --> CAACAAAACCATCAACTTCGTCTTCATATCTCTCATACAGAACCGGCATT
EX774550       --> CAACAAAGCCATCAACTTCGTCTTCATATCTCTCATACAGAACCGGCATT
EX751582       --> CAA-AAAGCCATCAACTTCGTCTTCATATCTCTCATACAGAACCGGCATT

               301    -    351
UN20175        --> GTGTGTGCTCCCACAAACCCAATATACAAAACAGTTAGGAAGTTGCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566318       <-- GTGTGTGCTCCCACAAACCCAATATACAAAACAGTTAGGAAGTTGCAACA
EX770340       <-- GTGTGTGCTCCCACAAACCCAATATACAAA-CAGTTAGGAAGTTGCAACA
FD549590       <-- ....................AATATACAAAACAGTTAGGAAGTTGCAACA
EX764620       <-- ................................AGTTAGGAAGTTGCAACA
EX746721       <-- ..................................................
EX763665       <-- ..................................................
EX751055       --> GTGTGTGCTCCCACAAACCCAATATACAAAACAGTTAGGAAGTTGCAACA
EX768504       --> GTGTGTGCCCCCACAAACCCAATATACAAAACAGTTAGGAAGTTGCAACA
EV571477       --> GTGTGTGCTCCCACAAACCCAATATACAAAACAGTTAGGAAGTTGCAACA
EX774550       --> GTGTGTGCTCCCACAAACCCAATATACAAAACAGTTAGGAAGTTGCAACA
EX751582       --> GTGTGTGCTCCCACAAACCCAATATACAAAACAGTTAGGAAGTTGCAACA

               351    -    401
UN20175        --> GCTCCCTATTATTGCGGCTAGCCATAGTCCAATCACAGCCATGAGGAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566318       <-- GCTCCTTATTATTGCGGCTAGCCATAGTCCAATCACAGCCATGAGGAACT
EX770340       <-- GCTCCCTATTATTGCGGCTAGCCATAGTCCAATCACAGCCATGAGGAACT
FD549590       <-- GCTCCCTATTATTGTGGCTAGCCATAGTCCAATCATAGCCATGAGGAACT
EX764620       <-- GCTCCCTATTATTGCGGCTAGCCATAGTCCAATCACAGCCATGAGGAACT
EX746721       <-- ..................................................
EX763665       <-- ..................................................
EX751055       --> GCTCCCTATTATTGCGGCTAGCCATAGTCCAATCACAGCCATGAGGAACT
EX768504       --> GCTCCCTATTATTGCGGCTAGCCATAGTCCAATCACAGCCATGAGGAACT
EV571477       --> GCTCCTTATTATTGCGGCTAGCCATAGTCCAATCACAGCCATGAGGAACT
EX774550       --> GCTCCCTATTATTGCGGCTAGCCATAGTCCAATCACAGCCATGAGGAACT
EX751582       --> GCTCCCTATTATTGCGGCTAGCCATAGTCCAATCACAGCCATGAGGAACT

               401    -    451
UN20175        --> GTTTCAAACTCCCTCTACAAGCCAAGTCCTGAAGAAACATCAAACCACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566318       <-- GTTTCAAACTCCCTCTACAAGCCAAGTCCTGAAGAAACATCAAACCACGG
EX770340       <-- GTTTCAAACTCCCTCTACAAGCCAAGTCCTGAAGAAACATCAAACCACGG
FD549590       <-- GTTTCAAACTCCCTCTACAAGCCAAGTCCTGAAGAAACATCAAACCACGG
EX764620       <-- GTTTCAAACTCCCTCTACAAGCCAAGTCCTGAAGAAACATCAAACCACGG
EX746721       <-- ...................................AACATCAAACCACGG
EX763665       <-- .......................................TCAAACCACGG
EX751055       --> GTTTCAAACTCCCTCTACAAGCCAAGTCCTGAAGAAACATCAAACCACGG
EX768504       --> GTTTCAAACTCCCTCTACAAGCCAAGTCCTGAAGAAACATCAAACCACGG
EV571477       --> GTTTCAAACTCCCTCTACAAGCCAAGTCCTGAAGAAACATCAAACCACGG
EX774550       --> GTTTCAAACTCCCTCTACAAGCCAAGTCCTGAAGAAACATCAAACCACGG
EX751582       --> GTTTCAAACTCCCTCTACAAGCCAAGTCCTGAAGAAACATCAAACCACGG

               451    -    501
UN20175        --> TTAACCTCTGTACCAACGGTCACACCTACATCAGCAAAGAAATCTTTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566318       <-- TTAACCTCTGTACCAACGGTCACACCTACATCAGCAAAGAAATCTTTTGG  Raphanus raphanistrum subsp. landra
EX770340       <-- TTAACCTCTGTACCAACGGTCACACCTACATCAGCAAAGAAATCTTTTGG  Raphanus raphanistrum subsp. landra
FD549590       <-- TTAACCTCTGTACCAACGGTCACACCGACATCAGCAAAGAAATCCTTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764620       <-- TTAACCTCTGTACCAACGGTCACACCGACATCAGCAAAGAAATCCTTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX746721       <-- TTAACCTCTGTACCAACGGTCACACCTACATCAGCAAAGAAATCTTTTGG  Raphanus raphanistrum subsp. maritimus
EX763665       <-- TTAACCTCTGTACCAACGGTCACACCGACATCAGCTAAGAAATCCTTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751055       --> TTAACCTCTGTACCAACGGTCACACCTACATCAGCAAAGAAATCTTTTGG  Raphanus raphanistrum subsp. maritimus
EX768504       --> TTAACCTCTGTACCAACGGTCACACCGACATCAGCAAAGAAATCCTTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571477       --> TTAACCTCTGTACCAACGGTCACACCTACATCAGCAAAGAAATCTTTTGG  Raphanus raphanistrum subsp. landra
EX774550       --> TTAACCTCTGTACCAACGGTCACACCTACATCAGCAAAGAAATCTTTTGG  Raphanus raphanistrum subsp. landra
EX751582       --> TTAACCTCTGTACCAACGGTCACACCTACATCAGCAAAGAAATCTTTTGG  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN20175        --> AAGAACAAGGCGAGGCACTCTAGACTGTGATGAGCGGTTTAGAGCCCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566318       <-- AAGAACAAGGCGAGGCACTCTAGACTGTGATGAGCGGTTTAGAGCCCCTG
EX770340       <-- AAGAACAAGGCGAGGCACTCTAGACTGTGATGAGCGGTTTAGAGCCCCTG
FD549590       <-- AAGAACAAGGCGAGGCACTCTAGACTGTGATGAGCGGTTTAGAGCCCCTG
EX764620       <-- AAGAACAAGGCGAGGCACTCTAGACTGTGATGAGCGGTTTAGAGCCCCTG
EX746721       <-- AAGAACAAGGCGAGGCACTCTAGACTGTGATGAGCGGTTTAGAGCCCCTG
EX763665       <-- AAGAACAAGGCGAGGCACTCTAGACTGTGATGAGCGGTTTAGAGCCCCTG
EX751055       --> AAGAACAAGGCGAGGCACTCTAGACTGTGATGAGCGGTTTAGAGCCCCTG
EX768504       --> AAGAACAAGGGGAGGCACTCTAGACTGTGATGAGCGGTTTAGAGCCCCTG
EV571477       --> AAGAACAAGGCGAGGCACTCTAGACTGTGATGAGCGGTTTAGAGCCCCTG
EX774550       --> AAGAACAAGGCGAGGCACTCTAGACTGTGATGAGCGGTTTAGAGCCCCTG
EX751582       --> AAGAACAAGGCGAGGCACTCTAGACTGTGATGAGCGGTTTAGAGCCCCTG

               551    -    601
UN20175        --> AGGCATTAGACCAAACGAACTGCACGATCATACCAAGCAAGAGACCGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566318       <-- AGGCATTAGACCAAACGAACTGCACGATCATACCAAGCAAGAGACCGTAA  Raphanus raphanistrum subsp. landra
EX770340       <-- AGGCATTTGACCAAACGAACTGCACGATCATACCAAGCAAGAGACCGTAA  Raphanus raphanistrum subsp. landra
FD549590       <-- AGGCATTAGACCAAACGAACTGCATGATCATACCAAGCAAGAGACCGTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764620       <-- AGGCATTAGACCAAACGAACTGCACGATCATACCAAGCAAGAGACCGTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX746721       <-- AGGCATTTGACCAAACGAACTGCACGATCATACCAAGCAAGAGACCGTAA  Raphanus raphanistrum subsp. maritimus
EX763665       <-- AGGCATTAGACCAAACGAACTGCACGATCATACCAAGCAAGAGACCGTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751055       --> AGGCATTTGACCAAACGAACTGCACGATCATACCAAGCAAGAGACCGTAA  Raphanus raphanistrum subsp. maritimus
EX768504       --> AGGCATTAGACCAAACGAACTGCACGATCATACCAAGCAAGAGACCGTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571477       --> AGGCATTAGACCAAACGAACTGCACGATCATACCAAGCAAGAGACCGTAA  Raphanus raphanistrum subsp. landra
EX774550       --> AGGCATTTGACCAAACGAACTGCACGATCATACCAAGCAAGAGACCGTAA  Raphanus raphanistrum subsp. landra
EX751582       --> AGGCATTTGACCAAACGAACTGCACGATCATACCAAGCAAGAGACCGTAA  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN20175        --> CAAACGAGAGACAGAAAGTGGAAGTTGATCCACTCGAAAAGCACCCAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566318       <-- CAAACGAGAGACAGAAAATGGAAGTTGATCCACTCGAAAAGCACCCAGAT
EX770340       <-- CAAACGAGAGACAGAAAGTGGAAGTTGATCCACTCGAAAAGCACCCAGAT
FD549590       <-- CAAACGAGAGACAGAAAGTGGAAGTTGATCCACTCGAAAAGCACCCAGAT
EX764620       <-- CAAACGAGAGACAGAAAGTGGAAGTTGATCCACTCGAAAAGCACCCAGAT
EX746721       <-- CAAACGAGAGACAGAAAGTGGAAGTTGATCCACTCGAAAAGCACCCAGAT
EX763665       <-- CAAACGAGAGACAGAAAGTGGAAGTTGATCCACTCGAAAAGCACCCAGAT
EX751055       --> CAAACGAGAGACAGAAAGTGGAAGTTGATCCACTCGAAAAGCACCCAGAT
EX768504       --> CAAACGAGAGACAGAAAGTGGAAGTTGATCCACTCGAAAAGCACCCAGAT
EV571477       --> CAAACGAGAGACAGAAAATGGAAGTTGATCCACTCGAAAAGCACCCAGAT
EX774550       --> CAAACGAGAGACAGAAAGTGGAAGTTGATCCACTCGAAAAGCACCCAGAT
EX751582       --> CAAACGAGAGACAGAAAGTGGAAGTTGATCCACTCGAAAAGCACCCAGAT

               651    -    701
UN20175        --> TGCAGTAGCTCCCATCAGAACACTCGCAGAGATCTTCTTGTTCCTCCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566318       <-- TGCAGTAGCTCCCATCAGAACGCTCGCAGAGATCTTCTTGTTCCTCCACA
EX770340       <-- TGCAGTAGCTCCCATCAGAACACTCGCAGAGATCTTCTTGTTCCTCCACA
FD549590       <-- TGCAGTAGCTCCCATCAGAACACTTGCAGAGATCTTCTTGTTCCTCCACA
EX764620       <-- TGCAGTAGCTCCCATCAGAACACTCGCAGAGATCTTCTTGTTCCTCCACA
EX746721       <-- TGCAGTAGCTCCCATCAGAACACTCGCAGAGATCTTCTTGTTCCTCCACA
EX763665       <-- TGCAGTAGCTCCCATCAGAACACTCGCAGAGATCTTCTTGTTCCTCCACA
EX751055       --> TGCAGTAGCTCCCATCAGAACACTCGCAGAGATCTTCTTGTTCCTCCACA
EX768504       --> TGCAGTAGCTCCCATCAGAACACTCGCAGAGATCTTCTTGTTCCTCCACA
EV571477       --> TGCAGTAGCTCCCATCAGAACGCTCGCAGAGATCTTCTTGTTCCTCCACA
EX774550       --> TGCAGTAGCTCCCATCAGAACACTCGCAGAGATCTTCTTGTTCCTCCACA
EX751582       --> TGCAGTAGCTCCCATCAGAACACTCGCAGAGATCTTCTTGTTCCTCCACA

               701    -    751
UN20175        --> ACAACACATCAGCAGATTTGCCACCGCCTAAGACATGATGAATCGGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566318       <-- ACAACACATCAGCAGATTTGCCACCGCCCAAGACATGATGAATCGGCTTC  Raphanus raphanistrum subsp. landra
EX770340       <-- ACAACACATCAGCAGATTTGCCACCGCCTAGGACATGATGAATCGGCTTC  Raphanus raphanistrum subsp. landra
FD549590       <-- ACAACACATCAGCAGATTTGCCACCGCCTAAGACATGATGAATCGGCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764620       <-- ACAACACATCAGCAGATTTGCCACCGCCTAAGACATGATGAATCGGCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX746721       <-- ACAACACATCAGCAGATTTGCCACCGCCTAGGACATGATGAATCGGCTTC  Raphanus raphanistrum subsp. maritimus
EX763665       <-- ACAACACCTCAGCAGATTTGCCACCGCCTAAGACATGATGAATCGGCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751055       --> ACAACACATCAGCAGATTTGCCACCGCCTAGGACATGATGAATCGGCTTC  Raphanus raphanistrum subsp. maritimus
EX768504       --> ACAACACATCAGCAGATTTGCCACCGCCTAAGACATGATGAATCGGCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571477       --> ACAACACATCAGCAGATTTGCCACCGCCCAAGACATGATGAATCGGCTTC  Raphanus raphanistrum subsp. landra
EX774550       --> ACAACACATCAGCAGATTTGCCACCGCCTAGGACATGATGAATCGGCTTC  Raphanus raphanistrum subsp. landra
EX751582       --> ACAACACATCAGCAGATTTGCCACCGCCTAGGACATGATGAATCGGCTTC  Raphanus raphanistrum subsp. maritimus

               751    -    801
UN20175        --> TCACGACCGAACAAGCGGTTGAAACGAGAAGCGACGGTATCTTCTTCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566318       <-- TCACGACCGAACAAGCGGTTGAAACGAGAAGAGACTGTATCTTCTTCTTG
EX770340       <-- TCACGACCGAACAAGCGGTTGAAACGAGAAGCGACGGTATCTTCTTCTTG
FD549590       <-- TCACGACCGAACAAGCGGTTGAAACGAGAAGCGACGGTATCTTCTTCTTG
EX764620       <-- TCACGACCGAACAAGCGGTTGAAACGAGAAGCGACGGTATCTTCTTCTTG
EX746721       <-- TCACGACCGAACAAGCGGTTGAAACGAGAAGCGACGGTATCTTCTTCTTG
EX763665       <-- TCACGACCGAACAAGCGGTTGAAACGAGAAGCGACGGTATCTTCTTCTTG
EX751055       --> TCACGACCGAACAAGCGGTTGA............................
EX768504       --> TCACGACCGAACAAGCGGTTGAAACG........................
EV571477       --> TCACGACCGAACAAGCGGTTGAAACGAGAAGAGACTGTATCTTCTTCTTG
EX774550       --> TCACGACCGAACAAGCGGTTGAAACGAGAAGCGACGGT............
EX751582       --> TCACGACCGAACAAGCGGTTGAAACGAGAAGCGACGGT............

               801    -    851
UN20175        --> TTCGAAGAAAGAAACGTTCTTTTTCTTATTAACCGTCTCGGTGAAGTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566318       <-- TTCGAAGAAAGAAACGTTTTTCTTCTTATGAACCGTCTCGGTGAAGTTAT
EX770340       <-- TTCGAAGAAAGAAACGTTCTTTTTCTTAT-GAGCGTCTCGGTGAAGTTAT
FD549590       <-- TTCGAAGAAAGAAACGTTCTTTTTCTTATTAACCGTCTCGGTGAAGTTAT
EX764620       <-- TTCGAAGAAAGAAACGTTCTTTTTCTTATTAACCGTCTCGGTGAAGTTAT
EX746721       <-- TTCGAAGAAAGAAACGTTCTTTTTCTTATGAACCGTCTCGGTGAAGTTAT
EX763665       <-- TTCGAAGAAAGAAACGTTCTTTTTCTTATTAACCGTCTCGGTGAAGTTAT
EX751055       --> ..................................................
EX768504       --> ..................................................
EV571477       --> TTCGAAGAAAG.......................................
EX774550       --> ..................................................
EX751582       --> ..................................................

               851    -    901
UN20175        --> CAACTAAATCGCCGATAACGTCCTCTACAATACTCTTCTCATGCATGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566318       <-- CAACCAAATCGCCGATAACGTCCTCTACAATACTCTTCTCATGCATGATT  Raphanus raphanistrum subsp. landra
EX770340       <-- CAACCAAATCGCCGATAACGTCCTCTACAATACTCTTCTCATGCATGATT  Raphanus raphanistrum subsp. landra
FD549590       <-- CAACTAAATCGCCGATAACATCCTCTACAATACTCTTCTCATGCATGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764620       <-- CAACTAAATCGCCGATAACATCCTCTACAATACTCTTCTCATGCATGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX746721       <-- CAACCAAATCGCCGATAACGTCCTCTACAATACTCTTCTCATGCATGATT  Raphanus raphanistrum subsp. maritimus
EX763665       <-- CAACTAAATCGCCGATAACATCCTCTACAATACTCTTCTCATGCATGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751055       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX768504       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571477       --> ..................................................  Raphanus raphanistrum subsp. landra
EX774550       --> ..................................................  Raphanus raphanistrum subsp. landra
EX751582       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               901    -    951
UN20175        --> CTTTGGAGGAGTTGGTGAAACAAGAATTTGGTTTCTGAGAATCTCACAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566318       <-- CTT-GGAGGAGTTGGTGAAACAAGAATTTGGTTTCTGAGAATCTCACAGA  Raphanus raphanistrum subsp. landra
EX770340       <-- CTT-GGAGGAGTTGGTGAAACAAGAATTTGGTTTCTGAGAATCTCACAGA  Raphanus raphanistrum subsp. landra
FD549590       <-- CTTTGGAGGAGTTGGTGAAACAAGAATTTGGTTTCTGAGAATCTCACAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764620       <-- CTTTGGAGGAGTTGGTGAAACAAGAATTTGGTTTCTGAGAATCTCACAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX746721       <-- CTT-GGAGGAGTTGGTGAAACAAGAATTTGGTTTCTGAGAATCTCACAGA  Raphanus raphanistrum subsp. maritimus
EX763665       <-- CTTTGGAGGAGTTGGTGAAACAAGAATTTGGTTTCTGAGAATCTCACAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751055       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX768504       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571477       --> ..................................................  Raphanus raphanistrum subsp. landra
EX774550       --> ..................................................  Raphanus raphanistrum subsp. landra
EX751582       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               951    -   1001
UN20175        --> AATGAAAAGTTTTTT-T-TTTTTTCTTTTTGTAGATTCTGAGAGAGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566318       <-- AATGAAAAGTTTTTTCT-TTTTTTCTTTTTGTAGATTACGAGAGAGATGA
EX770340       <-- AATGAAAAGTTTTTT-T-TTTTTT-TTTTTGTAGATTCTGAGAGAGATGA
FD549590       <-- AATGAAAAGTTTTTT-T-TTTctttttgtcc...................
EX764620       <-- AATGAAAAGTTTTTT-TCTTTTTTCTTTTTGTAGATTCTGAGAGAGATGA
EX746721       <-- AATGAAAAGTTTTGT-T-TT-----TTTTTGTAGATTCTGAGAGAGATGA
EX763665       <-- AATGAAAAGTTTTTT-C-TTTTTTCTTTTTGTAGATTCTGAGAGAGATcc
EX751055       --> ..................................................
EX768504       --> ..................................................
EV571477       --> ..................................................
EX774550       --> ..................................................
EX751582       --> ..................................................

               1001   -   1051
UN20175        --> ATGAACCACCACAAAGAATGAAAGATTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566318       <-- ATGAACCACCcc.................
EX770340       <-- ATGAACCACCACcc...............
FD549590       <-- .............................
EX764620       <-- ATGAACCACCACAAAGAATGAAAGATTCC
EX746721       <-- ATGAACCACCACAAAGAATGAAAGATTCC
EX763665       <-- .............................
EX751055       --> .............................
EX768504       --> .............................
EV571477       --> .............................
EX774550       --> .............................
EX751582       --> .............................