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Alignment for radish unigene UN20199

               1      -     51
UN20199        --> AGAGAGAATGGCGTCTAAGCTCTGCGACTCATGCAAATCGGCGACTGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- ..................................................
FY437955       <-- ..................................................
FD564933       <-- ..................................................
FY435541       <-- ..................................................
FY451635       --> AGAGAGAATGGCGTCTAAGCTCTGCGACTCATGCAAATCGGCGACTGCGG
FY438181       --> ................................tgcAATCGGCGACTGCGG
FY439737       --> ..................................cAATCGGCGACTGCGG
EX887225       --> ..................................................
FD560547       --> ..................................................

               51     -    101
UN20199        --> CGCTGTACTGCCGCCCAGACGCGGCGTTTCTCTGCCTCAGCTGCGACTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- ..................................................
FY437955       <-- ..................................................
FD564933       <-- ..................................................
FY435541       <-- ..................................................
FY451635       --> CGCTGTACTGCCGCCCAGACGCGGCGTTTCTCTGCCTCAGCTGCGACTCT
FY438181       --> CGCTGTACTGCCGCCCAGACGCGGCGTTTCTCTGCCTCAGCTGCGACTCT
FY439737       --> CGCTGTACTGCCGCCCAGACGCGGCGTTTCTCTGCCTCAGCTGCGACTCT
EX887225       --> ..................................................
FD560547       --> ..................................................

               101    -    151
UN20199        --> AAAGTCCACGCGGCGAACAAGCTCGCGTCGAGGCACGCGCGCGTGTGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- ..................................................
FY437955       <-- ..................................................
FD564933       <-- ..................................................
FY435541       <-- ..................................................
FY451635       --> AAAGTCCACGCGGCGAACAAGCTCGCGTCGAGGCACGCGCGCGTGTGGAT
FY438181       --> AAAGTCCACGCGGCGAACAAGCTCGCGTCGAGGCACGCGCGCGTGTGGAT
FY439737       --> AAAGTCCACGCGGCGAACAAGCTCGCGTCGAGGCACGCGCGCGTGTGGAT
EX887225       --> ..................................................
FD560547       --> ..................................................

               151    -    201
UN20199        --> GTGCGAAGTGTGCGAGCAAGCGCCGGCTCACGTCACGTGCAAGGCGGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- ..................................................
FY437955       <-- ..................................................
FD564933       <-- ..................................................
FY435541       <-- ..................................................
FY451635       --> GTGCGAAGTGTGCGAGCAAGCGCCGGCTCACGTCACGTGCAAGGCGGACG
FY438181       --> GTGCGAAGTGTGCGAGCAAGCGCCGGCTCACGTCACGTGCAAGGCGGACG
FY439737       --> GTGCGAAGTGTGCGAGCAAGCGCCGGCTCACGTCACGTGCAAGGCGGACG
EX887225       --> ..................................................
FD560547       --> ..................................................

               201    -    251
UN20199        --> CGGCCGCCCTCTGCGTCACGTGCGACCGAGACATCCACTCCGCAAACCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- ..................................................
FY437955       <-- ..................................................
FD564933       <-- ..................................................
FY435541       <-- ..................................................
FY451635       --> CGGCCGCCCTCTGCGTCACGTGCGACCGAGACATCCACTCCGCAAACCCC
FY438181       --> CGGCCGCCCTCTGCGTCACGTGCGACCGAGACATCCACTCCGCAAACCCC
FY439737       --> CGGCCGCCCTCTGCGTCACGTGCGACCGAGACATCCACTCCGCAAACCCC
EX887225       --> ..................................................
FD560547       --> ..................................................

               251    -    301
UN20199        --> TTGGCTCGCCGCCACGAGCGCGTCCCCGTCACGCCTTTCTACGACTCAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- ..................................................
FY437955       <-- ..................................................
FD564933       <-- ..................................................
FY435541       <-- ..................................................
FY451635       --> TTGGCTCGCCGCCACGAGCGCGTCCCCGTCACGCCTTTCTACGACTCAGT
FY438181       --> TTGGCTCGCCGCCACGAGCGCGTCCCCGTCACGCCTTTCTACGACTCAGT
FY439737       --> TTGGCTCGCCGCCACGAGCGCGTCCCCGTCACGCCTTTCTACGACTCAGT
EX887225       --> ..................................................
FD560547       --> ..................................................

               301    -    351
UN20199        --> CTCCGACTCCGACGGATCCGCCAAGCACGCCGCCGTCAACTTCCTCGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- ..................................................
FY437955       <-- ..................................................
FD564933       <-- ..................................................
FY435541       <-- ..................................................
FY451635       --> CTCCGACTCCGACGGATCCGCCAAGCACGCCGCCGTCAACTTCCTCGACG
FY438181       --> CTCCGACTCCGACGGATCCGCCAAGCACGCCGCCGTCAACTTCCTCGACG
FY439737       --> CTCCGACTCCGACGGATCCGCCAAGCACGCCGCCGTCAACTTCCTCGACG
EX887225       --> ..................................................
FD560547       --> ..................................................

               351    -    401
UN20199        --> ACTGCTACTTCTCCGATCTTGACGGGAACGCCAGCCGCGAGGAGGAGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- ..................................................
FY437955       <-- ..................................................
FD564933       <-- ..................................................
FY435541       <-- ..................................................
FY451635       --> ACTGCTACTTCTCCGATCTTGACGGGAACGCCAGCCGCGAGGAGGAGGAT
FY438181       --> ACTGCTACTTCTCCGATCTTGACGGGAACGCCAGCCGCGAGGAGGAGGAT
FY439737       --> ACTGCTACTTCTCCGATCTTGACGGGAACGCCAGCCGCGAGGAGGAGGAT
EX887225       --> ..................................................
FD560547       --> ..................................................

               401    -    451
UN20199        --> GAGGCCGCCTCGTGGCTGCTCCCGAATCCGAAGACGGCGGCGCTGGCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- .........TCGTGGCTGCTCCCGAATCCGAAGACGGCGGCGCTGGCTAC
FY437955       <-- ..................................................
FD564933       <-- ..................................................
FY435541       <-- ..................................................
FY451635       --> GAGGCCGCCTCGTGGCTGCTCCCGAATCCGAAGACGGCGGCGCTGGCTAC
FY438181       --> GAGGCCGCCTCGTGGCTGCTCCCGAATCCGAAGACGGCGGCGCTGGCTAC
FY439737       --> GAGGCCGCCTCGTGGCTGCTCCCGAATCCGAAGACGGCGGCGCTGGCTAC
EX887225       --> ..................................................
FD560547       --> ..................................................

               451    -    501
UN20199        --> GGCGGTGCCGGGAGATGAACCGGAGATGAACACGGGTCAGCAGTACATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- GGCGGTGCCGGGAGATGAACCGGAGATGAACACGGGTCAGCAGTACATGT
FY437955       <-- ........CGGGAGATGAACCGGAGATGAACACGGGTCAGCAGTACATGT
FD564933       <-- ..................................................
FY435541       <-- ..................................................
FY451635       --> GGCGGTGCCGGGAGATGAACCGGAGATGAACACGGGTCAGCAGTACATGT
FY438181       --> GGCGGTGCCGGGAGATGAACCGGAGATGAACACGGGTCAGCAGTACATGT
FY439737       --> GGCGGTGCCGGGAGATGAACCGGAGATGAACACGGGTCAGCAGTACATGT
EX887225       --> ...................gCGGAGATGAACACGGGTCAGCAGTACATGT
FD560547       --> ..................................................

               501    -    551
UN20199        --> TCACGGATCCGGATCCGTATCTGGACTACGGGACTGTTGATCCGAAGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- TCACGGATCCGGATCCGTATCTGGACTACGGGACTGTTGATCCGAAGGTG
FY437955       <-- TCACGGATCCGGATCCGTATCTGGACTACGGGACTGTTGATCCGAAGGTG
FD564933       <-- ..................................................
FY435541       <-- ..................................................
FY451635       --> TCACGGATCCGGATCCGTATCTGGACTACGGGACTGTTGATCCGAAGGTG
FY438181       --> TCACGGATCCGGATCCGTATCTGGACTACGGGACTGTTGATCCGAAGGTG
FY439737       --> TCACGGATCCGGATCCGTATCTGGACTACGGGACTGTTGATCCGAAGGTG
EX887225       --> TCTCGGATCCGGATCCGTATCTGGACTACGGGACTGTTTATCCGAAGGTG
FD560547       --> ..................................................

               551    -    601
UN20199        --> GAGTCGCAGGAGCAGAACAGCTCCGGCACCACCGACGGTGTGGTTCCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- GAGTCGCAGGAGCAGAACAGCTCCGGCACCACCGACGGTGTGGTTCCGGT  Raphanus sativus cv GSK3-1
FY437955       <-- GAGTCGCAGGAGCAGAACAGCTCCGGCACCACCGACGGTGTGGTTCCGGT  Raphanus sativus cv GSK3-1
FD564933       <-- ........................................TGGTTCCAGT  Raphanus sativus var. oleiformis
FY435541       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451635       --> GAGTCGCAGGAGCAGAACAGCTCCGGCACCACCGACGGTGTGGTTCCGGT  Raphanus sativus cv GSK3-1
FY438181       --> GAGTCGCAGGAGCAGAACAGCTCCGGCACCACCGACGGTGTGGTTCCGGT  Raphanus sativus cv GSK3-1
FY439737       --> GAGTCGCAGGAGCAGAACAGCTCCGGCACCACCGACGGTGTGGTTCCGGT  Raphanus sativus cv GSK3-1
EX887225       --> GAGTCGCAGGAGCAGAACAGCTCCGGCACCACCGACGGTGTGGTTCCAGT  Raphanus sativus var. oleiformis
FD560547       --> ........................................TGGTTCCAGT  Raphanus sativus var. oleiformis

               601    -    651
UN20199        --> GGAGAATCGGACGGTTAAGGTGGCGACGGCGGTGAACGAGAACTGCTACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- GGAGAATCGGACGGTTAAGGTGGCGACGGCGGTGAACGAGAACTGCTACG  Raphanus sativus cv GSK3-1
FY437955       <-- GGAGAATCGGACGGTTAAGGTGGCGACGGCGGTGAACGAGAACTGCTACG  Raphanus sativus cv GSK3-1
FD564933       <-- GGAGAATAGGACGGTTAAGGTGGCGACGGCGGTGAACGAGAACTGCTACG  Raphanus sativus var. oleiformis
FY435541       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451635       --> GGAGAATCGGACGGTTAAGGTGGCGACGGCGGTGAACGAGAACTGCTACG  Raphanus sativus cv GSK3-1
FY438181       --> GGAGAATCGGACGGTTAAGGTGGCGACGGCGGTGAACGAGAACTGCTACG  Raphanus sativus cv GSK3-1
FY439737       --> GGAGAATCGGACGGTTAAGGTGGCGACGGCGGTGAACGAGAACTGCTACG  Raphanus sativus cv GSK3-1
EX887225       --> GGAGAATAGGACGGTTAAGGTGGCGACGGCGGTGAACGAGAACTGCTACG  Raphanus sativus var. oleiformis
FD560547       --> GGAGAATAGGACGGTTAAGGTGGCGACGGCGGTGAACGAGAACTGCTACG  Raphanus sativus var. oleiformis

               651    -    701
UN20199        --> AAATTGATTTCACCGGAGGATCTAAAGGCTTTACTTACGGTTACAACTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- AAATTGATTTCACCGGAGGATCTAAAGGCTTTACTTACGGTTACAACTCC  Raphanus sativus cv GSK3-1
FY437955       <-- AAATTGATTTCACCGGAGGATCTAAAGGCTTTACTTACGGTTACAACTCC  Raphanus sativus cv GSK3-1
FD564933       <-- AGCTTGATTTCACCGGAGGATCTAAAGGCTTTACTTACGGTTACAACTCC  Raphanus sativus var. oleiformis
FY435541       <-- ..................................................  Raphanus sativus cv GSK3-1
FY451635       --> AAATTGATTTCACCGGAGGATCTAAAGGCTTTACTTACGGTTACAACTCC  Raphanus sativus cv GSK3-1
FY438181       --> AAATTGATTTCACCGGAGGATCTAAAGGCTTTACTTACGGTTACAACTCC  Raphanus sativus cv GSK3-1
FY439737       --> AAATTGATTTCACCGGAGGATCTAAAGGCTTTACTTACGGTTACAACTCC  Raphanus sativus cv GSK3-1
EX887225       --> AGCTTGATTTCACCGGAGGATCTAAAGGCTTTACTTACGGTTACAACTCC  Raphanus sativus var. oleiformis
FD560547       --> AGCTTGATTTCACCGGAGGATCTAAAGGCTTTACTTACGGTTACAACTCC  Raphanus sativus var. oleiformis

               701    -    751
UN20199        --> ATTAGCCACAGCCAGGTATCGTCATCCTCATTGGAAGTGGGAGTGGTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- ATTAGCCACAGCCAGGTATCGTCATCCTCATTGGAAGTGGGAGTGGTGCC
FY437955       <-- ATTAGCCACAGCCAGGTATCGTCATCCTCATTGGAAGTGGGAGTGGTGCC
FD564933       <-- ATTAGCCACA---GCGTATCGTCATCCTCATTGGAAGTGGGAGTGGTGCC
FY435541       <-- ..................................................
FY451635       --> ATTAGCCACAGCCAGGTATCGTCATCCTCATTGGAAGTGGGAGTGGTGCC
FY438181       --> ATTAGCCACAGC---GTATCGTCATCCTCATTGGAAGTGGGAGTGGTGCC
FY439737       --> ATTAGCCACAGC---GTATCGTCATCCTCATTGGAAGTGGGAGTGGTGCC
EX887225       --> ATTAGCCACAGCCAGGTATCGTCATCCTCATTGGAAGTGGGAGTGGTGCC
FD560547       --> ATTAGCCACAGC---GTATCGTCATCCTCATTGGAAGTGGGAGTGGTGCC

               751    -    801
UN20199        --> AGATGGCGGGTCTGTGGCGGACGTTTCATACCCTTACGGAGGTGCTGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- AGATGGCGGGTCTGTGGCGGACGTTTCATACCCTTACGGAGGTGCTGCAA  Raphanus sativus cv GSK3-1
FY437955       <-- AGATGGCGGGTCTGTGGCGGACGTTTCATACCCTTACGGAGGTGCTGCAA  Raphanus sativus cv GSK3-1
FD564933       <-- AGATGGCGGCTCTGTGGCCGACGTTTCATACCCTTACGGAGGTGGTGCAA  Raphanus sativus var. oleiformis
FY435541       <-- .................................TTACGGAGGTGCTGCAA  Raphanus sativus cv GSK3-1
FY451635       --> AGATGGCGGGTCTGTGGCGGACGTTTCATACCCTTACGGAGGTGCTGCAA  Raphanus sativus cv GSK3-1
FY438181       --> AGATGGCGGGTCTGTGGCGGACGTTTCATACCCTTACGGAGGTGCTGCAA  Raphanus sativus cv GSK3-1
FY439737       --> AGATGGCGGGTCTGTGGCGGACGTTTCATACCCTTACGGAGGTGCTGCAA  Raphanus sativus cv GSK3-1
EX887225       --> AGATGGCGGCTCTGTGGCCGACGTTTCATACCCTTACGGAGTTGGTGCAA  Raphanus sativus var. oleiformis
FD560547       --> AGATGGCGGCTCTGTGGCCGACGTTTCATACCCTTACGGAGGTGGTGCAA  Raphanus sativus var. oleiformis

               801    -    851
UN20199        --> CGAGTGTAACCGATCCGGGAACTCAGAGGGCAGTTCCGCTAACGGCAGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- CGAGTGTAACCGATCCGGGAACTCAGAGGGCAGTTCCGCTAACGGCAGCG
FY437955       <-- CGAGTGTAACCGATCCGGGAACTCAGAGGGCAGTTCCGCTAACGGCAGCG
FD564933       <-- CGAGTGTAACCGATCCGGGAACTCAAAGGGCAGTTCCGCTAACGGCAGCG
FY435541       <-- CGAGTGTAACCGATCCGGGAACTCAGAGGGCAGTTCCGCTAACGGCAGCG
FY451635       --> CGAGTGTAACCGATCCGGGAACTCAGAGGGCAGTTC..............
FY438181       --> CGAGTGTAACCGATCCGGGAACTCAGAGGGCAGTTCCGCT..........
FY439737       --> CGAGTGTAACCGATCCGGGAACTCAGAGGGCAGTTCCGCTAACGGCAGCG
EX887225       --> CGAGTGTAACCGATCCGGGAACTCAAAGGGCAGTTCCGCTAACGGCAGCG
FD560547       --> CGAGTGTAACCGATCCGGGAACTCAAAGGGCAGTTCCGCTAACGGCAGCG

               851    -    901
UN20199        --> GAGAGAGAGGCGAGAGTAATGAGGTACAGAGAGAAGAGGAAGAACAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- GAGAGAGAGGCGAGAGTAATGAGGTACAGAGAGAAGAGGAAGAACAGGAA
FY437955       <-- GAGAGAGAGGCGAGAGTAATGAGGTACAGAGAGAAGAGGAAGAACAGGAA
FD564933       <-- GAGAGAGAGGCGAGAGTAATGAGGTACAGAGAGAAGAGGAAGAACAGGAA
FY435541       <-- GAGAGAGAGGCGAGAGTAATGAGGTACAGAGAGAAGAGGAAGAACAGGAA
FY451635       --> ..................................................
FY438181       --> ..................................................
FY439737       --> GAGAGAGAGGCGAGAGTAATGAGGTACAGAGAGAA...............
EX887225       --> GAGAGAGAGGCGAGAGTAATGAGGTACAGAGAGAAGAGGAAGAACAGGAA
FD560547       --> GAGAGAGAGGCGAGAGTAATGAGGTACAGAGAGAAGAGGAAGAACAGGAA

               901    -    951
UN20199        --> GTTCGAGAAGACGATAAGGTATGCTTCGAGGAAAGCGTATGCGGAGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- GTTCGAGAAGACGATAAGGTATGCTTCGAGGAAAGCGTATGCGGAGATGA
FY437955       <-- GTTCGAGAAGACGATAAGGTATGCTTCGAGGAAAGCGTATGCGGAGATGA
FD564933       <-- GTTCGAGAAGACGATAAGGTATGCTTCGAGGAAAGCGTATGCGGAGATGA
FY435541       <-- GTTCGAGAAGACGATAAGGTATGCTTCGAGGAAAGCGTATGCGGAGATGA
FY451635       --> ..................................................
FY438181       --> ..................................................
FY439737       --> ..................................................
EX887225       --> GTTCGAGAAGACGATAAGGTATGCTTCGAGGAAAGCGTATGCGGAGATGA
FD560547       --> GTTCGAGAAGACGATAAGGTATGCTTCGAGGAAAGCGTATGCGGAGATGA

               951    -   1001
UN20199        --> GACCTAGGATCAAGGGAAGGTTTGCGAAGCGGACTGATACGAATGAGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- GACCTAGGATCAAGGGAAGGTTTGCGAAGCGGACTGATACGAATGAGAGC  Raphanus sativus cv GSK3-1
FY437955       <-- GACCTAGGATCAAGGGAAGGTTTGCGAAGCGGACTGATACGAATGAGAGC  Raphanus sativus cv GSK3-1
FD564933       <-- GACCTAGGATCAAGGGAAGGTTTGCAAAGCGGACTGATACGAATGAGAGC  Raphanus sativus var. oleiformis
FY435541       <-- GACCTAGGATCAAGGGAAGGTTTGCGAAGCGGACTGATACGAATGAGAGC  Raphanus sativus cv GSK3-1
FY451635       --> ..................................................  Raphanus sativus cv GSK3-1
FY438181       --> ..................................................  Raphanus sativus cv GSK3-1
FY439737       --> ..................................................  Raphanus sativus cv GSK3-1
EX887225       --> GACCTAAGATCAAGGGAAGGTTTGCAAAGCGGACTGATACGAATGAGAGC  Raphanus sativus var. oleiformis
FD560547       --> GACCTAGGATCAAGGGAAGGTTTGCAAAGCGGACTGATACGAATGAGAGC  Raphanus sativus var. oleiformis

               1001   -   1051
UN20199        --> A---ACGACGTGGTTGTTGGTCATGGCGGTGGTATCTTTAGCGGGTTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- A---ACGACGTGGTTGTTGGTCATGGCGGTGGTATCTTTAGCGGGTTTGG  Raphanus sativus cv GSK3-1
FY437955       <-- A---ACGACGTGGTTGTTGGTCATGGCGGTGGTATCTTTAGCGGGTTTGG  Raphanus sativus cv GSK3-1
FD564933       <-- AGCAACGACGTGGTTGTTGGTCATGGCGGTGGTATCTTTAGCGGGTTTGG  Raphanus sativus var. oleiformis
FY435541       <-- A---ACGACGTGGTTGTTGGTCATGGCGGTGGTATCTTTAGCGGGTTTGG  Raphanus sativus cv GSK3-1
FY451635       --> ..................................................  Raphanus sativus cv GSK3-1
FY438181       --> ..................................................  Raphanus sativus cv GSK3-1
FY439737       --> ..................................................  Raphanus sativus cv GSK3-1
EX887225       --> AGCAACGACGTGGTTTTTGGTCATGGCGGTGGTATCTTTAGCGGGTTTGG  Raphanus sativus var. oleiformis
FD560547       --> AGCAACGACGTGGTTGTTGGTCATGGCGGTGGTATCTTTAGCGGGTTTGG  Raphanus sativus var. oleiformis

               1051   -   1101
UN20199        --> ACTTGTACCTACATTTTAGAGATTGCTGAATGCTGAGTGAGAGAGAGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- ACTTGTACCTACATTTTAGAGATTGCTGAATGCTGAGTGAGAGAGAGACT
FY437955       <-- ACTTGTACCTACATTTTAGAGATTGCTGAATGCTGAGTGAGAGAGAGACT
FD564933       <-- ACTTGTACCTACATTTTAGAGATTGCTGAATGCTGAGTGAGAGAGAGACT
FY435541       <-- ACTTGTACCTACATTTTAGAGATTGCTGAATGCTGAGTGAGAGAGAGACT
FY451635       --> ..................................................
FY438181       --> ..................................................
FY439737       --> ..................................................
EX887225       --> ATTTGTACCTACATTTTAGAGATTGCTGAATGCTGAGTGAGAGAGAGACT
FD560547       --> ACTTGTACCTACATTTTAGAGATTGCTGAATGCTGAGTGAGAGAGAGACT

               1101   -   1151
UN20199        --> CTTAATATGTGGGTACTTTGTTTGGTGTTTTAGTAATAATGTTTTTATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- CTTAATATGTGGGTACTTTGTTTGGTGTTTTAGTAATAATGTTTTTATTA
FY437955       <-- CTTAATATGTGGGTACTTTGTTTGGTGTTTTAGTAATAATGTTTTTATTA
FD564933       <-- CTTAATATGTGGGTACTTTGTTTGGTGTTTTAGTAATAATGTTTT-ATTA
FY435541       <-- CTTAATATGTGGGTACTTTGTTTGGTGTTTTAGTAATAATGTTTTTATTA
FY451635       --> ..................................................
FY438181       --> ..................................................
FY439737       --> ..................................................
EX887225       --> CTTAATATGTGGG.....................................
FD560547       --> CTTAATATGTGGGTACTTTGTTTGGTGTTTTAGTAATAATGTTTT-ATTA

               1151   -   1201
UN20199        --> ACAAACTTTTGTCTTTTAAGAGTTGTTTTGTTTTATTTATGTTGATGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- ACAAACTTTTGTCTTTTAAGAGTTGTTTTGTTTTATTTATGTTGATGTAA
FY437955       <-- ACAAACTTTTGTCTTTTAAGAGTTGTTTTGTTTTATTTATGTTGATGTAA
FD564933       <-- ACAAACTTTTGTCTTTTAAGAGTTGTTTTGTTTTATTTATGTTGATGTAA
FY435541       <-- ACAAACTTTTGTCTTTTAAGAGTTGTTTTGTTTTATTTATGTTGATGTAA
FY451635       --> ..................................................
FY438181       --> ..................................................
FY439737       --> ..................................................
EX887225       --> ..................................................
FD560547       --> ACAAACTTTTGTCTTTTAAGAGTTGTTTTGTTTTATTTATGTTGATGTAA

               1201   -   1251
UN20199        --> TGTTTTATATTTTCGTGTATATATGATTATGTGATTTTGAACAAGTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453077       <-- TGTTTTATATTTTCGTGTATATATGATTATGTGATTTTGAAC........
FY437955       <-- TGTTTTATATTTTCGTGTATATATGATTATGTGATTTTGAACAAGTTTTT
FD564933       <-- TCTTTTATATTTTCGTGTATATATGATTATGTGATTCTGAACAAGTTTTT
FY435541       <-- TGTTTTATATTTTCGTGTATATATGATTATGTGATTTTGAACAAGTTTTT
FY451635       --> ..................................................
FY438181       --> ..................................................
FY439737       --> ..................................................
EX887225       --> ..................................................
FD560547       --> TCTTTTATATTTTCGTGTATATATGATTATGTGATTCTGAACAAGTTTTT

               1251   -   1301
UN20199        --> GTGTATGCAATGTTTTAT
                   ~~~~~~~~~~~~~~~~~~
FY453077       <-- ..................
FY437955       <-- GTGTATGCAATGTTT...
FD564933       <-- GTGTATGCAATG......
FY435541       <-- GTGTATGCAATG......
FY451635       --> ..................
FY438181       --> ..................
FY439737       --> ..................
EX887225       --> ..................
FD560547       --> GTGTATGCAATGTTTTAT