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Alignment for radish unigene UN20213

               1      -     51
UN20213        --> GGAGACACGCCAATTTTCGACCAGAGACTCGAAACTTGTGGTGGTTTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532685       <-- GGAGACACGCCAATTTTCGACCAGAGACTCGAAACTTGTGGTGGTTTCTA
FD951500       <-- ...............................................ggA
EX899829       <-- ..................................................
FD537042       <-- ..................................................
FD968028       <-- ..................................................
FD531303       <-- ..................................................
EY942110       <-- ..................................................
FD536790       <-- ..................................................
FD961314       <-- ..................................................
EY945348       <-- ..................................................
EV528793       --> GGAGACACGCCAATTTTCGACCAGAGACTCGAAACTTGTGGTGGTTTCTA
FD535696       --> .......................ggGACTCGAAACTTGTGGTGGTTTCTA
FD955434       --> ...............................................ggA
EX895808       --> ..................................................
EY945919       --> ..................................................
EY949927       --> ..................................................
FD954804       --> ..................................................
FD540249       --> ..................................................
FD540570       --> ..................................................
FD972053       --> ..................................................
EY937483       --> ..................................................
FD965625       --> ..................................................

               51     -    101
UN20213        --> TAGAAGGGGGGATACAAGGAGATTATTAACAAGAGAGACGCTTTGAAG-A
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532685       <-- TAGAAGGGGGGATACAAGGAGATTATTAACAAGAGAGACGCTTTGAAG-A
FD951500       <-- TAGAAGGGGGGATACAAGGAGATTATTAACAAGAGAGACGCTTTGAAG-A
EX899829       <-- ............................ggAAGAGAGACGCTTTGAAT-A
FD537042       <-- .........................................gggaagG-A
FD968028       <-- .........................................gggaagG-A
FD531303       <-- ..................................................
EY942110       <-- ..................................................
FD536790       <-- ..................................................
FD961314       <-- ..................................................
EY945348       <-- ..................................................
EV528793       --> TAGAAGGGGGGATACAAGGAGATTATTAACAAGAGAGACGCTTTGAAG-A
FD535696       --> TTGAAGGGGGGATACAAGGAGATTATTAACAAGAGAGACGCTTTGAAG-A
FD955434       --> TAGAAGGGGGGATACAAGGAGATTATTAACAAGAGAGACGCTTTGAAG-A
EX895808       --> ............................ggAAGAGAGACGCTTTGAAT-A
EY945919       --> ............................ggAAGAGAGACGCTTCGAAG-A
EY949927       --> ............................ggAAGAGAGACGCTTCGAAG-A
FD954804       --> ............................ggAAGAGAGACGCTTTGAAG-A
FD540249       --> .....................................ggagaTTGAAGGA
FD540570       --> .........................................gggaagG-A
FD972053       --> .........................................gggaagG-A
EY937483       --> ..................................................
FD965625       --> ..................................................

               101    -    151
UN20213        --> TAAGAGAGAAGCCCATAAACAAACACAAAAATGCTTCAACTCTGCTCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532685       <-- TAAGAGAGAAGCCCATAAACAAACACAAAAATGCTTCAACTTTGCTCCAC  Raphanus raphanistrum subsp. maritimus
FD951500       <-- TAAGAGAGAAGCCCATAAACAAA-ACAAAAATGCTTCAACTCTGCTCCAT  Raphanus sativus cv Rat-Tail Radish #3870
EX899829       <-- TAAGAGAGAAGCCCATAAACAAA-ACAAAAATGCTTCAACTCTGCTCCAT  Raphanus sativus cv Early Scarlet Globe
FD537042       <-- TAAGAGAGAAGCCCATAAACAAACACAAAAATGCTTCAACTCTGCTCCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968028       <-- TAAGAGAGAAGTCCATAAACAAACACAAAAATGCTTCAACTTTGCTCCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD531303       <-- ........................................TCTGCTCCAC  Raphanus raphanistrum subsp. maritimus
EY942110       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD536790       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD961314       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY945348       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV528793       --> TAAGAGAGAAGCCCATAAACAAACACAAAAATGCTTCAACTCTGCTCCAC  Raphanus raphanistrum subsp. maritimus
FD535696       --> TAAGAGAGAAGCCCATAAACAAACACAAAAATGCTTCAACTCTGCTCCAC  Raphanus raphanistrum subsp. maritimus
FD955434       --> TAAGAGAGAAGCCCATAAACAAA-ACAAAAATGCTTCAACTCTGCTCCAT  Raphanus sativus cv Rat-Tail Radish #3870
EX895808       --> TAAGAGAGAAGCCCATAAACAAA-ACAAAAATGCTTCAACTCTGCTCCAT  Raphanus sativus cv Early Scarlet Globe
EY945919       --> TAAGAGAGAAGCCCATAAGCAAACACAAAAATGCTTCAACTCTGCTCCAC  Raphanus sativus cv Rat-Tail Radish #3870
EY949927       --> TAAGAGAGAAGCCCATAAACAAACACAAAAATGCTTCAACTCTGCTCCAC  Raphanus sativus cv Rat-Tail Radish #3870
FD954804       --> TAAGAGAGAAGCCCATAAACAAA-ACAAAAATGCTTCAACTCTGCTCCAT  Raphanus sativus cv Rat-Tail Radish #3870
FD540249       --> TAAGAGAGAAGTCCATAAACAAACACAAAAATGCTTCAACTCTGCTCCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540570       --> TAAGAGAGAAGCCCATAAACAAACACAAAAATGCTTCAACTCTGCTCCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972053       --> TAAGAGAGAAGTCCATAAACAAACACAAAAATGCTTCAACTCTGCTCCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937483       --> ............................ggATGCTTCAACTCTGCTCCAT  Raphanus sativus cv Early Scarlet Globe
FD965625       --> ...............................TGCTTCAACTCTGCTCCAC  Raphanus raphanistrum subsp. maritimus

               151    -    201
UN20213        --> TTTCCGTCCTCAACTTCTCTTTTCTCCCCAAATCCGATTCACAGATGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532685       <-- TTTCCGTCCTCAACTTCTCTTTTCTCCCCAAATCCGATTCACAGATGGAG
FD951500       <-- TTTCCGTCCTCAACTTCTCTTTTCTCCCAAAATCCGATTCACAGATGGAG
EX899829       <-- TTTCCGTCCTCAACTTCTCTTTTCTCCCCAAATCCGATTCACAGATGAAG
FD537042       <-- TTTCCGTCCTCAACTTCTCTTTTCTCCCCAAATCTGATTCACAGATGGAG
FD968028       <-- TTTCCGTCCTCAACTTTTCTTTTCTCCCCAAATCCGATTCACAGATGGAG
FD531303       <-- TTTCCGTCCTCAACTTCTCTTTTCTCCCCAAATCCGATTCACAGATGGAG
EY942110       <-- ................CTCTTTTCTCCCCAAATCCGATTCACCGATGGAG
FD536790       <-- ..................................................
FD961314       <-- ..................................................
EY945348       <-- ..................................................
EV528793       --> TTTCCGTCCTCAACTTCTCTTTTCTCCCCAAATCCGATTCACAGATGGAG
FD535696       --> TTTCCGTCCTCAACTTCTCTTTTCTCCCCAAATCCGATTCACAGATGGAG
FD955434       --> TTTCCGTCCTCAACTTCTCTTTTCTCCCAAAATCCGATTCACAGATGGAG
EX895808       --> TTTCCGTCCTCAACTTCTCTTTTCTCCCCAAATCCGATTCACAGATGAAG
EY945919       --> TTTCCGTCCTCAACTTCTCTTTTCTCCCCAAATCCGATTCACCGATGGAG
EY949927       --> TTTCCGTCCTCAACTTCTCTTTTCTCCCCAAATCCGATTCACCGATGGAG
FD954804       --> TTTCCGTCCTCAACTTCTCTTTTCTCCCAAAATCCGATTCACAGATGGAG
FD540249       --> TTTCCGTCCTCAACTTCTCTTTTCTCCCCAAATCCGATTCACAGATGGAG
FD540570       --> TTTCCGTCCTCAACTTCTCTTTTCTCCCCAAATCTGATTCACAGATGGAG
FD972053       --> TTTCCGTCCTCAACTTCTCTTTTCTCCCCAAATCCGATTCACAGATGGAG
EY937483       --> TTTCCGTCCTCAACTTCTCTTTTCTCCCAAAATCCGATTCACAGATGGAG
FD965625       --> TTTCCGTCCTCAACTTCTCTTTTCTCCCCAAATCCGATTCACAGATGGAG

               201    -    251
UN20213        --> TTTTGATTCGCCAACTAAACTTTGGTTCGAGCAATTCAGTTGTGAGTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532685       <-- TTTTGATTCGCCAACCAAACTTTGGTTCGAGCAATTCAGTTGTGAGTATC  Raphanus raphanistrum subsp. maritimus
FD951500       <-- TTTTGATTCGCCAAGTAAACTTTGGTTCGAGCAATTCAGTTGTGAGTATC  Raphanus sativus cv Rat-Tail Radish #3870
EX899829       <-- TTTTGATTCGCCAAATAAACTTTGGTTCGAGCAATTCAGTTGTGAGTATC  Raphanus sativus cv Early Scarlet Globe
FD537042       <-- TTTTGATTCGCCAAGTAAACTTTGGTTCGAGCAATTCAGTTGTGAGTATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968028       <-- TTTTGATTCGCCAACTAAAGTTTGGTTCGAGCAATTCAGTTGTGAGTATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD531303       <-- TTTTGATTCGCCAACTAAACTTTGGTTCGAGCAATTCAGTTGTGAGTATC  Raphanus raphanistrum subsp. maritimus
EY942110       <-- TTTTGATTCGCCAACTAAACTTTGGTTCGAGCAATTCAGTTGTGAGTATC  Raphanus sativus cv Rat-Tail Radish #3870
FD536790       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD961314       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY945348       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV528793       --> TTTTGATTCGCCAACCAAACTTTGGTTCGAGCAATTCAGTTGTGAGTATC  Raphanus raphanistrum subsp. maritimus
FD535696       --> TTTTGATTCGCCAACTAAACTTTGGTTCGAGCAATTCAGTTGTGAGTATC  Raphanus raphanistrum subsp. maritimus
FD955434       --> TTTTGATTCGCCAAGTAAACTTTGGTTCGAGCAATTCAGTTGTGAGTATC  Raphanus sativus cv Rat-Tail Radish #3870
EX895808       --> TTTTGATTCGCCAAATAAACTTTGGTTCGAGCAATTCAGTTGTGAGTATC  Raphanus sativus cv Early Scarlet Globe
EY945919       --> TTTTGATTCGCCAACTAAACTTTGGTTCGAGCAATTCAGTTGTGAGTATC  Raphanus sativus cv Rat-Tail Radish #3870
EY949927       --> TTTTGATCCGCCAACTAAACTTTGGTTCGAGCAATTCAGTTGTGAGTATC  Raphanus sativus cv Rat-Tail Radish #3870
FD954804       --> TTTTGATTCGCCAAGTAAACTTTGGTTCGAGCAATTCAGTTGTGAGTATC  Raphanus sativus cv Rat-Tail Radish #3870
FD540249       --> TTTTGATTCGCCAACTAAAGTTTGGTTCGAGCAATTCAGTTGTGAGTATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540570       --> TTTTGATTCGCCAAGTAAACTTTGGTTCGAGCAATTCAGTTGTGAGTATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972053       --> TTTTGATTCGCCAACTAAAGTTTGGTTCGAGCAATTCAGTTGTGAGTATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937483       --> TTTTGATTCGCCAAGTAAACTTTGGTTCGAGCAATTCAGTTGTGAGTATC  Raphanus sativus cv Early Scarlet Globe
FD965625       --> TTTTGATTCGCCAACTAAACTTTGGTTCGAGCAATTCAGTTGTGAGTATC  Raphanus raphanistrum subsp. maritimus

               251    -    301
UN20213        --> CGTCCAGTGATACGTTGCCAGAGAGTTAGTGGAGGTCGAGGAGGAGCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532685       <-- CGTCCAGTGATACGTTGCCAGAGAGTTAGTGGAGGTCGAGGAGGAGCTAA  Raphanus raphanistrum subsp. maritimus
FD951500       <-- CGTCCAGTGATACGTTGCCAGAGAGTAAGTTGAGGTCGAGGAGGAGCTAA  Raphanus sativus cv Rat-Tail Radish #3870
EX899829       <-- CGTCCAGTGATACGTTGCCAGAGAGTTAGTGGAGGTCGAGGAGGAGCTAA  Raphanus sativus cv Early Scarlet Globe
FD537042       <-- CGTCCAGTGATACGTTGCCAGCGAGTAAGTGGAGGTCGAGGAGGAGCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968028       <-- CGTCCAGTGATACGTTGCCAGAGAGTAAGTGGAGGTCGAGGAGGAGCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD531303       <-- CGTCCAGTGATACGTTGCCAGAGAGTTAGTGGAGGTCGAGGAGGAGCTAA  Raphanus raphanistrum subsp. maritimus
EY942110       <-- CGTCCAGTGATACGTTGCCAGAGAGTTAGTGGAGGTCGAGGAGTATCTAA  Raphanus sativus cv Rat-Tail Radish #3870
FD536790       <-- ...CCAGTGATACGTTGCCAGAGAGTAAGTGGAGGTCGAGGAGGAGCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD961314       <-- ...........................................GAGCTAA  Raphanus raphanistrum subsp. maritimus
EY945348       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV528793       --> CGTCCAGTGATACGTTGCCAGAGAGTTAGTGGAGGTCGAGGAGGAGCTAA  Raphanus raphanistrum subsp. maritimus
FD535696       --> CGTCCAGTGATACGTTGCCAGAGAGTTAGTGGAGGTCGAGGAGGAGCTAA  Raphanus raphanistrum subsp. maritimus
FD955434       --> CGTCCAGTGATACGTTGCCAGAGAGTAAGTTGAGGTCGAGGAGGAGCTAA  Raphanus sativus cv Rat-Tail Radish #3870
EX895808       --> CGTCCAGTGATACGTTGCCAGAGAGTTAGTGGAGGTCGAGGAGGAGCTAA  Raphanus sativus cv Early Scarlet Globe
EY945919       --> CGTCCAGTGATACGTTGCCAGAGAGTTAGTGGAGGTCGAGGAGTATCTAA  Raphanus sativus cv Rat-Tail Radish #3870
EY949927       --> CGTCCAGTGATACGTTGCCAGAGAGTTAGTGGAGGTCGAGGAGGAGCTAA  Raphanus sativus cv Rat-Tail Radish #3870
FD954804       --> CGTCCAGTGATACGTTGCCAGAGAGTAAGTGGAGGTCGAGGAGGAGCTAA  Raphanus sativus cv Rat-Tail Radish #3870
FD540249       --> CGTCCAGTGATACGTTGCCAGAGAGTAAGTGGAGGTCGAGGAGGAGCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540570       --> CGTCCAGTGATACGTTGCCAGCGAGTAAGTGGAGGTCGAGGAGGAGCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972053       --> CGTCCAGTGATACGTTGCCAGAGAGTAAGTGGAGGTCGAGGAGGAGCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937483       --> CGTCCAGTGATACGTTGCCAGAGAGTTAGTGGAGGTCGAGGAGGAGCTAA  Raphanus sativus cv Early Scarlet Globe
FD965625       --> CGTCCAGTGATACGTTGCCAGAGAGTTAGTGGAGGTCGAGGAGGAGCTAA  Raphanus raphanistrum subsp. maritimus

               301    -    351
UN20213        --> CCGAAGCAAACCCGCCAAGCCTCCTGTTAAAGAAGGCAGCAACAAAACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532685       <-- CCGAAGCAAACCCGCCAAGCCTCCCGTTAAAGAAGGTAGCAACAAAACAG
FD951500       <-- CCGAAGCAAACCCGCCAAGCCTCCTGTTAAAGAAGGCAGCAACAAAACAG
EX899829       <-- CCGAAGCAAACCCGCCAAGCCTCCTGTTAAAGAAGGGAGCAACAAAACAG
FD537042       <-- CCGAAGCAAACCCGCCAAGCCTCCAGTTAAAGAAGGCAGCAACAAAACCG
FD968028       <-- CCGAAGCAAACCCGCCAAGCCTCCTGTTAAAGAAGGGAGCAACAAAACAG
FD531303       <-- CCGAAGCAAACCCGCCAAGCCTCCTGTTAAAGAAGGGAGCAACAAAACAG
EY942110       <-- CCGAAGCAAACCCGCCAAGCCTCCAGTTAAAGAAGGCAGCAACAAAACCG
FD536790       <-- CCGAAGCAAACCCGCCAAGCCTCCTGTTAAAGAAGGGAGCAACAAAACAG
FD961314       <-- CCGAAGCAAACCCGCCAAGCCTCCTGTTAAAGAAGGCAGCAACAAAACAG
EY945348       <-- ..................................................
EV528793       --> CCGAAGCAAACCCGCCAAGCCTCCCGTTAAAGAAGGTAGCAACAAAACAG
FD535696       --> CCGAAGCAAACCCGCCAAGCCTCCTGTTAAAGAAGGGAGCAACAAAACAG
FD955434       --> CCGAAGCAAACCCGCCAAGCCTCCTGTTAAAGAAGGCAGCAACAAAACAG
EX895808       --> CCGAAGCAAACCCGCCAAGCCTCCTGTTAAAGAAGGGAGCAACAAAACAG
EY945919       --> CCGAAGCAAACCCGCCAAGCCTCCAGTTAAAGAAGGCAGCAACAAAACCG
EY949927       --> CCGAAGCAAACCCGCCAAGCCTCCAGTTAAAGAAGGCAGCAACAAAACCG
FD954804       --> CCGAAGCAAACCCGCCAAGCCTCCTGTTAAAGAAGGCAGCAACAAAACAG
FD540249       --> CCGAAGCAAACCCGCCAAGCCTCCTGTTAAAGAAGGGAGCAACAAAACAG
FD540570       --> CCGAAGCAAACCCGCCAAGCCTCCAGTTAAAGAAGGCAGCAACAAAACCG
FD972053       --> CCGAAGCAAACCCGCCAAGCCTCCTGTTAAAGAAGGGAGCAACAAAACAG
EY937483       --> CCGAAGCAAACCCGCCAAGCCTCCTGTTAAAGAAGGCAGCAACAAAACAG
FD965625       --> CCGAAGCAAACCCGCCAAGCCTCCTGTTAAAGAAGGCAGCAACAAAACAG

               351    -    401
UN20213        --> TGATCGAAGGTTTAGTCACCGAATCGCTTCCCAACGGCATGTTTCGAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532685       <-- TGATCGAAGGTTTAGTCACCGAATCGCTTCCCAACGGCATGTTTCGAGTT  Raphanus raphanistrum subsp. maritimus
FD951500       <-- TGATCGAAGGTTTAGTCACCGAATCGCTTCCCAACGGCATGTTCCGAGTT  Raphanus sativus cv Rat-Tail Radish #3870
EX899829       <-- TGATCGAAGGTTTAGTCACCGAATCGCTTCCCAACGGCATGTTCCGAGTT  Raphanus sativus cv Early Scarlet Globe
FD537042       <-- TGATCGAAGGTTTAGTCACCGAATCGCTTCCCAACGGCATGTTTCGAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968028       <-- TGATCGAAGGTTTAGTCACCGAATCGCTTCCCAACGGCATGTTTCGAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD531303       <-- TGATCGAAGGTTTAGTCACCGAATCGCTTCCCAACGGCATGTTCCGAGTT  Raphanus raphanistrum subsp. maritimus
EY942110       <-- TGATCGAAGGTTTAGTCACCGAATCGCTTCCCAACGGCATGTTTCGAGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD536790       <-- TGATCGAAGGTTTAGTCACCGAATCGCTTCCCAACGGCATGTTTCGAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD961314       <-- TGATCGAAGGTTTAGTCACCGAATCGCTTCCCAACGGCATGTTTCGAGTT  Raphanus raphanistrum subsp. maritimus
EY945348       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV528793       --> TGATCGAAGGTTTAGTCACCGAATCGCTTCCCAACGGCATGTTTCGAGTT  Raphanus raphanistrum subsp. maritimus
FD535696       --> TGATCGAAGGTTTAGTCACCGAATCGCTTCCCAACGGCATGTTCCGAGTT  Raphanus raphanistrum subsp. maritimus
FD955434       --> TGATCGAAGGTTTAGTCACCGAATCGCTTCCCAACGGCATGTTCCGAGTT  Raphanus sativus cv Rat-Tail Radish #3870
EX895808       --> TGATCGAAGGTTTAGTCACCGAATCGCTTCCCAACGGCATGTTCCGAGTT  Raphanus sativus cv Early Scarlet Globe
EY945919       --> TGATCGAAGGTTTAGTCACCGAATCGCTTCCCAACGGCATGTTTCGAGTT  Raphanus sativus cv Rat-Tail Radish #3870
EY949927       --> TGATCGAAGGTTTAGTCACCGAATCGCTTCCCAACGGCATGTTTCGAGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD954804       --> TGATCGAAGGTTTAGTCACCGAATCGCTTCCCAACGGCATGTTCCGAGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD540249       --> TGATCGAAGGTTTAGTCACCGAATCGCTTCCCAACGGCATGTTTCGAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540570       --> TGATCGAAGGTTTAGTCACCGAATCGCTTCCCAACGGCATGTTTCGAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972053       --> TGATCGAAGGTTTAGTCACCGAATCGCTTCCCAACGGCATGTTTCGAGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937483       --> TGATCGAAGGTTTAGTCACCGAATCGCTTCCCAACGGCATGTTCCGAGTT  Raphanus sativus cv Early Scarlet Globe
FD965625       --> TGATCGAAGGTTTAGTCACCGAATCGCTTCCCAACGGCATGTTTCGAGTT  Raphanus raphanistrum subsp. maritimus

               401    -    451
UN20213        --> GATCTTGAGAATGGAGATAACATTCTTGGGTACATTTGTGGTAAGATCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532685       <-- GATCTTGAGAATGGAGATAACATTCTTGGGTACATTTGTGGTAAGATCAG
FD951500       <-- GATCTTGAGAATGGAGATAACATTCTTGGGTACATTTGTGGTAAGATCAG
EX899829       <-- GATCTTGAGAATGGAGATAACATTCTTGGGTACATTTGTGGTAAGATCAG
FD537042       <-- GATCTTGAGAATGGAGATAACATTCTTGGGTACATTTGTGGTAAGATCAG
FD968028       <-- GATCTTGAGAATGGAGATAACATTCTTGGGTACATTTGTGGTAAGATCGG
FD531303       <-- GATCTTGAGAATGGAGATAACATTCTTGGGTACATTTGTGGTAAGATCAG
EY942110       <-- GATCTTGAGAATGGAGATAACATTCTTGGGTACATTTGTGGTAAGATCAG
FD536790       <-- GATCTTGAGAATGGAGATAACATTCTTGGGTACATTTGTGGTAAGATCAG
FD961314       <-- GATCTTGAGAATGGAGATAACATTCTTGGGTACATTTGTGGTAAGATCAG
EY945348       <-- ..................................................
EV528793       --> GATCTTGAGAATGGAGATAACATTCTTGGGTACATTTGTGGTAAGATCAG
FD535696       --> GATCTTGAGAATGGAGATAACATTCTTGGGTACATTTGTGGTAAGATCAG
FD955434       --> GATCTTGAGAATGGAGATAACATTCTTGGGTACATTTGTGGTAAGATCAG
EX895808       --> GATCTTGAGAATGGAGATAACATTCTTGGGTACATTTGTGGTAAGATCAG
EY945919       --> GATCTTGAGAATGGAGATAACATTCTTGGGTACATTTGTGGTAAGATCAG
EY949927       --> GATCTTGAGAATGGAGATAACATTCTTGGGTACATTTGTGGTAAGATCAG
FD954804       --> GATCTTGAGAATGGAGATAACATTCTTGGGTACATTTGTGGTAAGATCAG
FD540249       --> GATCTTGAGAATGGAGATAACATTCTTGGGTACATTTGTGGTAAGATCAG
FD540570       --> GATCTTGAGAATGGAGATAACATTCTTGGGTACATTTGTGGTAAGATCAG
FD972053       --> GATCTTGAGAATGGAGATAACATTCTTGGGTACATTTGTGGTAAGATCGG
EY937483       --> GATCTTGAGAATGGAGATAACATTCTTGGGTACATTTGTGGTAAGATCAG
FD965625       --> GATCTTGAGAATGGAGATAACATTCTTGGGTACATTTGTGGTAAGATCAG

               451    -    501
UN20213        --> GAAGAATTTCATACGAATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532685       <-- GAAGAATTTCATACGAATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGA
FD951500       <-- GAAGAATTTCATACGAATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGA
EX899829       <-- GAAGAATTTCATACGAATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGA
FD537042       <-- GAAGAATTTCATACGAATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGA
FD968028       <-- GAAGAATTTCATAAGAATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGA
FD531303       <-- GAAGAATTTCATACGAATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGA
EY942110       <-- GAAGAATTTCATACGAATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGA
FD536790       <-- GAAGAATTTCATAAGAATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGA
FD961314       <-- GAAGAATTTCATACGAATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGA
EY945348       <-- ...............AATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGA
EV528793       --> GAAGAATTTCATACGAATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGA
FD535696       --> GAAGAATTTCATACGAATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGA
FD955434       --> GAAGAATTTCATACGAATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGA
EX895808       --> GAAGAATTTCATACGAATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGA
EY945919       --> GAAGAATTTCATACGAATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGA
EY949927       --> GAAGAATTTCATACGAATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGA
FD954804       --> GAAGAATTTCATACGAATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGA
FD540249       --> GAAGAATTTCATAAGAATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGA
FD540570       --> GAAGAATTTCATACGAATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGA
FD972053       --> GAAGAATTTCATAAGAATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGA
EY937483       --> GAAGAATTTCATACGAATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGA
FD965625       --> GAAGAATTTCATACGAATTCTCCCTGGTGATAAAGTGAAAGTTGAAATGA

               501    -    551
UN20213        --> GTGTTTATGATTCTACGAAAGGTCGTATCGTTTTCAGAATGAGTAGTAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532685       <-- GTGTTTATGATTCTACGAAAGGTCGTATCGTTTTCAGAATGAGTAGTAGA
FD951500       <-- GTGTTTATGATTCTACGAAAGGTCGTATCGTTTTCAGAATGAGTAGTAGA
EX899829       <-- GTGTTTATGACTCTACGAAAGGTCGTATCGTTTTCAGAATGAGTAGTAGA
FD537042       <-- GTGTTTATGATTCTACGAAAGGTCGTATCGTTT-CAGAATGAGTAGTAGA
FD968028       <-- GTGTTTATGATTCTACGAAAGGTCGTATCGTTTTCAGAATGAGTAGTAGA
FD531303       <-- GTGTTTATGATTCTACGAAAGGTCGTATCGTTTTCAGAATGAGTAGTAGA
EY942110       <-- GTGTTTATGGTTCTACGAAAGGTCGTATCGTTTTCAGAATGAGTAGTAGA
FD536790       <-- GTGTTTATGATTCTACGAAAGGTCGTATCGTTTTCAGAATGAGTAGTAGA
FD961314       <-- GTGTTTATGATTCTACGAAAGGTCGTATCGTTTTCAGAATGAGTAGTAGA
EY945348       <-- GTGTTTATGATTCTACGAAAGGTCGTATCGTTTTCAGAATGAGTAGTAGA
EV528793       --> GTGTTTATGATTCTACGAAAGGTCGTATCGTTTTCAGAATGAGTAGTAGA
FD535696       --> GTGTTTATGATTCTACGAAAGGTCGTATCGTTTTCAGAATGAGTAGTAGA
FD955434       --> GTGTTTATGATTCTACGAAAGGTCGTATCGTTTTCAGAATGAGTAGTAGA
EX895808       --> GTGTTTATGACTCTACGAAAGGTCGTATCGTTTTCAGAATGAGTAGTAGA
EY945919       --> GTGTTTATGGTTCTACGAAAGGTCGTATCGTTTTCAGAATGAGTAGTAGA
EY949927       --> GTGTTTATGATTCTACGAAAGGTCGTATCGTTTTCAGAATGAGTAGTAGA
FD954804       --> GTGTTTATGATTCTACGAAAGGTCGTATCGTTTTCAGAATGAGTAGTAGA
FD540249       --> GTGTTTATGATTCTACGAAAGGTCGTATCGTTTTCAGAATGAGTAGTAGA
FD540570       --> GTGTTTATGATTCTACGAAAGGTCGTATCGTTT-CAGAATGAGTAGTAGA
FD972053       --> GTGTTTATGATTCTACGAAAGGTCGTATCGTTTTCAGAATGAGTAGTAGA
EY937483       --> GTGTTTATGATTCTACGAAAGGTCGTATCGTTTTCAGAATGAGTAGTAGA
FD965625       --> GTGTTTATGATTCTACGAAAGGTCGTATCGTTTTCAGAATGAGTAGTAGA

               551    -    601
UN20213        --> GACTAAGACGAATCCCAAAAGGGGTTGTTTCAAGATCATGTTATATTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532685       <-- GACTAAGAAGAATCCCAAAAGGGGTTGTTTCAAGATCATGTTATATTCTA
FD951500       <-- GACTAAGAAGAATCCCAAAAGGGGTTGTTTCAAGATCATGTTATATTCTA
EX899829       <-- GACTAAGACGAATCCCAAAAGGGGTTGTTTCAAGATCATGTTATATTCTA
FD537042       <-- GACTAAGACGAATCCCAAAAGGGGTTTTTTCAAGATCATGTTATATTCTA
FD968028       <-- GACTAAGACGAATCCGGAAAGGGGTTGGTTCAAGATCATGTTATATTCTA
FD531303       <-- GACTAAGACGAATCCCAAAAGGGGTTGTTTCAAGATCATGTTATATTCTA
EY942110       <-- GACTAAGACGAATCCCAAAAGGGGTTGTTTCAAGATCATGTTATATTCTA
FD536790       <-- GACTAAGACGAATCCGGAAAGGGGTTGTTTCAAGATCATGTTATATTTTA
FD961314       <-- GACTAAGAAGAATCCCAAAAGGGGTTGTTTCAAGATCATGTTATATTCTA
EY945348       <-- GACTAAGACGAATCCCAAAAGGGGTTGTTTCAAGATCATGTTATATTCTA
EV528793       --> GACTAAGAAGAATCCCAAAAGGGGTTGTTTCAAGATCATGTTATATTCTA
FD535696       --> GACTAAGACGAATCCCAAAAGGGGTTGTTTCAAGATCATGTTATATTCTA
FD955434       --> GACTAAGAAGAATCCCAAAAGGGGTTGTTTCAAGATCATGTTATATTCTA
EX895808       --> GACTAAGACGAATCCCAAAAGGGGTTGTTTCAAGATCATGTTATATTCTA
EY945919       --> GACTAAGACGAATCCCAAAAGGGGTTGTTTCAAGATCATGTTATATTCTA
EY949927       --> GACTAAGACGAATCCCAAAAGGGGTTGTTTCAAGATCATGTTATATTCTA
FD954804       --> GACTAAGAAGAATCCCAAAAGGGGTTGTTTCAAGATCATGTTATATTCTA
FD540249       --> GACTAAGACGAATCCGGAAAGGGGTTGTTTCAAGATCATGTTATATTCTA
FD540570       --> GACTAAGACGAATCCCAAAAGGGGTTTTTTCAAGATCATGTTATATTCTA
FD972053       --> GACTAAGACGAATCCGGAAAGGGGTTGGTTCAAGATCATGTTATATTCTA
EY937483       --> GACTAAGACGAATCCCAAAAGGGGTTGTTTCAAGATCATGTTATATTCTA
FD965625       --> GACTAAGAAGAATCCCAAAAGGGGTTGTTTCAAGATCATGTTATATTCTA

               601    -    651
UN20213        --> TTTTT-AAGTGTAGGCAAAGTTTGATAAAGCTTTAACATTTATGCAATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532685       <-- TTTTT-AAGTGTAGGCAATGTTTGATAAAGCTTTAACATTTATGCAATAT
FD951500       <-- TTTTT-AAGTGTAGGCAAAGTTTGATAAAGCTTTAACATTTATGCAATAT
EX899829       <-- TTTTT-AAGTGTAGGCAAAGTTTGATAAAGCTTTAACATTTATGCAATAT
FD537042       <-- TTTTT-AAGTGTAGGCAATGTTTGATAAAGCTTTAACATTTATGCAATAT
FD968028       <-- TTTTT-AAGTGTAGGCAAAGTTTGATAAAGCTTTAACATTTATGCAATAT
FD531303       <-- TTTTT-AAGTGTAGGCAAAGTTTGATAAAGCTTTAACATTTATGCAATAT
EY942110       <-- TCTTT-AAGTGTAGGCAAAGTTTGATAAAGCTTTAACATTTATGCAATAT
FD536790       <-- TTTTT-AAGTGTAGGCAAAGTTTGATAAAGCTTTAACATTTATGCAATAT
FD961314       <-- TTTTT-AAGTGTAGGCAATGTTTGATAAAGCTTTAACATTTATGCAATAT
EY945348       <-- TCTTT-AAGTGTAGGCAAAGTTTGATAAAGCTTTAACATTTATGCAATAT
EV528793       --> TTTTTTAAGTGTAGGCAATGTTTGATAAAGCTTTAACATTTATGCAATAT
FD535696       --> TTTTT-AAGTGTAGGCAAAGTTTGATAAAGCTTTAACATTTATGCAATAT
FD955434       --> TTTTT-AAGTGTAGGCAAAGTTTGATAAAGCTTTAACATTTATGCAATAT
EX895808       --> TTTTT-AAGTGTAGGCAAAGTTTGATAAA.....................
EY945919       --> TCTTT-AAGTGTAGGCAAAGTTTGATAAAGCTTTAACATTTATGCAATAT
EY949927       --> TCTTT-AAGTGTAGGCAAAGTTTGATAAAGCTTTAACATTTATGCAATAT
FD954804       --> TTTTT-AAGTGTAGGCAAAGTTTGATAAAGCTTTAACATTTATGCAATAT
FD540249       --> TTTTT-AAGTGTAGGCAAAGTTTGATAAAGCTTTAACATTTATGCAATAT
FD540570       --> TTTTT-AAGTGTAGGCAATGTTTGATAAAGCTTTAACATTTATGCAATAT
FD972053       --> TTTTT-AAGTGTAGGCAAAGTTTGATAAAGCTTTAACATTTATGCAATAT
EY937483       --> TTTTT-AAGTGTAGGCAAAGTTTG..........................
FD965625       --> TTTTT-AAGTGTAGGCAATGTTTGATAAAGCTTTAACATTTATGCAATAT

               651    -    701
UN20213        --> GAA-TACATGATTAGGCTTTCATGGATAAAGCTTTTTTTT--ATGTCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532685       <-- GAA-TACATGATTAGGCTTTCATGG.........................  Raphanus raphanistrum subsp. maritimus
FD951500       <-- GAA-TACATGATTAGGCTTTCATGGATAAAGCTTTTTTT---ATGTCCAA  Raphanus sativus cv Rat-Tail Radish #3870
EX899829       <-- GAA-TACATGATTAGGCTTTCATGGATAAAGCTTTTTTTTttatgtcac.  Raphanus sativus cv Early Scarlet Globe
FD537042       <-- GAAATACATGATTAGGCTTT..............................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968028       <-- GAAATACATGATTAGGCTTTCATGG.........................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD531303       <-- GAA-TACATGATTAGGCTTTCATGGATAAAGCTTTTTTTT--ATGTCCAA  Raphanus raphanistrum subsp. maritimus
EY942110       <-- GAAa..............................................  Raphanus sativus cv Rat-Tail Radish #3870
FD536790       <-- GAAATACATGATTAGGCTTTCATGGATAAAGCTTTTTTTTTTATGTCCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD961314       <-- GAA-TACATGATTAGGCTTTCATGGATAATGCTTTTATTT--ATGTCCAA  Raphanus raphanistrum subsp. maritimus
EY945348       <-- GAAATACATGATTAGGCTT...............................  Raphanus sativus cv Rat-Tail Radish #3870
EV528793       --> GAA-TACATGATTAGGCTTTCATGG.........................  Raphanus raphanistrum subsp. maritimus
FD535696       --> GAA-TACATGATTAGGCTTTCATGG.........................  Raphanus raphanistrum subsp. maritimus
FD955434       --> GAA-TACATGATTAGGCTTTCATGGATAAAGCTTTTTTT---ATGTCCAA  Raphanus sativus cv Rat-Tail Radish #3870
EX895808       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY945919       --> GAAATACATGATTAGGCTTTCATGGATAAAGCTTTTTTTT-TATGTCC..  Raphanus sativus cv Rat-Tail Radish #3870
EY949927       --> GAA-TACATGATTAGGCTTTCATGGAc.......................  Raphanus sativus cv Rat-Tail Radish #3870
FD954804       --> GAA-TACATGATTAGGCTTTCATGGATAAAGCTTTTTTT---ATGTCCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD540249       --> GAAATACATGATTAGGCTTTCATGGATAAAGCTTTTTTTTTTATGTCCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540570       --> GAAATACATGATTAGGCTTTCATGG.........................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972053       --> GAAATACATGATTAGGCTTTCATGG.........................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY937483       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD965625       --> GAA-TACATGATTAGGCTTTCATGGATAATGCTTTTATTT--ATGTCCAA  Raphanus raphanistrum subsp. maritimus

               701    -    751
UN20213        --> GTTGATTCTTGTTTTGATACTAGTGTTGTTCTGCGGTTTGATAACCAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532685       <-- ..................................................
FD951500       <-- GTTGATTCTTGTTTTGATACTAGTGTTGT.....................
EX899829       <-- ..................................................
FD537042       <-- ..................................................
FD968028       <-- ..................................................
FD531303       <-- GTTGATTCTTGTTTTGATACGAGTGTTGTTCTGCGGTTTGATAACCAGAC
EY942110       <-- ..................................................
FD536790       <-- GTTGATTCTTGTTTCGATACTAGTGTTGTTCTGCGGTTTGATAACCAGAC
FD961314       <-- GTTGATTCTTGTTTTGATACTAGTGTTGTTCTGCGGTTTGATAACCAGAC
EY945348       <-- ..................................................
EV528793       --> ..................................................
FD535696       --> ..................................................
FD955434       --> GTTGATTCTTGTTTTGATACTAGTGTTGTTCTGCGGTTTGATA-CCAGAC
EX895808       --> ..................................................
EY945919       --> ..................................................
EY949927       --> ..................................................
FD954804       --> GTTGATTCTTGTTTTGATACTAGTGTTGTTCTGCGGTTTGATA-CCAGAC
FD540249       --> GTTGATTCTTGTTTCGAT................................
FD540570       --> ..................................................
FD972053       --> ..................................................
EY937483       --> ..................................................
FD965625       --> GTTGATTCTTGTTTTGATACTAGTGTTGTTCTGCGGTTTGATAACCAGAC

               751    -    801
UN20213        --> GAAGTTGCTAAAACCCTTTATTGAGAACGACTGTATGTAAAATTATAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532685       <-- ..................................................
FD951500       <-- ..................................................
EX899829       <-- ..................................................
FD537042       <-- ..................................................
FD968028       <-- ..................................................
FD531303       <-- GAAGTTGCTAAGACCCTTTATTGAGAACGACTGTATGTAAAATTATAGCT
EY942110       <-- ..................................................
FD536790       <-- GAAGTTGCTAAAACCCTTTATTGAGAACGACTGTATGTAAAATTATAGCT
FD961314       <-- GAAGTTGCTAAAACCCTTTATTGAGAACGACTGTATGTAAAATTATAGCT
EY945348       <-- ..................................................
EV528793       --> ..................................................
FD535696       --> ..................................................
FD955434       --> GA-GTTGCTAAA-CCCTTTATTag..........................
EX895808       --> ..................................................
EY945919       --> ..................................................
EY949927       --> ..................................................
FD954804       --> GAAGTTGCTAAAACCCTTTATTGAGAACGACTGTATGTAAA-TTATAGCT
FD540249       --> ..................................................
FD540570       --> ..................................................
FD972053       --> ..................................................
EY937483       --> ..................................................
FD965625       --> GAAGTTGCTAAAACCCTTTATTGAGAACGACTGTA...............

               801    -    851
UN20213        --> TTGTCTTCTGTCCTTTGAGCTAAGCTCATTTCATATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532685       <-- ......................................
FD951500       <-- ......................................
EX899829       <-- ......................................
FD537042       <-- ......................................
FD968028       <-- ......................................
FD531303       <-- TTGTCTTCTATCCTTTGAGCTAAGCTCATTTCATATTT
EY942110       <-- ......................................
FD536790       <-- TTGTCTTCT.............................
FD961314       <-- TTGTCTTCc.............................
EY945348       <-- ......................................
EV528793       --> ......................................
FD535696       --> ......................................
FD955434       --> ......................................
EX895808       --> ......................................
EY945919       --> ......................................
EY949927       --> ......................................
FD954804       --> TTGTCTTCTGTCCTTTGAGCTAAGCTCAgtgat.....
FD540249       --> ......................................
FD540570       --> ......................................
FD972053       --> ......................................
EY937483       --> ......................................
FD965625       --> ......................................