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Alignment for radish unigene UN20232

               1      -     51
UN20232        --> GGATAAGACTCCCAAAAGAAAAGGAGAAAAGGATGTAATTAAATTCAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570990       <-- ..................................................
EW726538       <-- ..................................................
EY939650       <-- ..................................................
FD550718       <-- ..................................................
FD948618       <-- ..................................................
EW730683       --> GGATAAGACTCCCAAAAGAAAAGGAGAAAAGGATGTAATTAAATTCAGCT
FD944375       --> ....caaACTCCCAAAAGAAAAGGAGAAAAGGATGTAATTAAATTCAGCT
FD546636       --> ....................AAGGAGAAACGGATGTAATTAAATTCAGCT
EY935548       --> .....................cGGAGAAAAGGATGTAATTAAATTCAGCT
FD574906       --> ..............................GGATGTAATTAAATTCAGCT
FD983754       --> ..................................................

               51     -    101
UN20232        --> TTTACATTTAAACAAACATCTAATGTGTTGATAATGCAAAAGCAATTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570990       <-- ..................................................
EW726538       <-- ..................................................
EY939650       <-- ..................................................
FD550718       <-- ..................................................
FD948618       <-- ..................................................
EW730683       --> TTTACATTTAAACAAACATCTAATGTGTTGATAATGCAAAAGCAATTCAT
FD944375       --> TTTACATTTAAACAAACATCTAATGTGTTGATAATGCAAAAGCAATTCAT
FD546636       --> TTTACATTTAAACAAACATCTAATGTGTTGATAATGCAAAAGCAATTCAT
EY935548       --> TTTACATTTAAACAAACATCTAATGTGTTGATAATGCAAAAGCAATTCAT
FD574906       --> TTTACATTTAAACAAACATCTAATGTGTTGATAATGCAAAAGCAATTCAT
FD983754       --> ........................GTGTTGATAATGCAAAAGCAATTCAT

               101    -    151
UN20232        --> ATATGGAAAAAAATTGCAACAAAAAGCTATGGGGTAATCGCTCTTTCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570990       <-- ..................................................
EW726538       <-- ..................................................
EY939650       <-- ..................................................
FD550718       <-- ..................................................
FD948618       <-- ..................................................
EW730683       --> ATATGGAAAAAAATTGCAACAAAAAGCTATGGGGTAATCGCTCTTTCTAG
FD944375       --> ATATGGAAAAAAATTGCAACAAAAAGCTATGGGGTAATCGCTCTTTCTAG
FD546636       --> ATATGGAAAAAAATTGCAACAAAAAGCTATGGGGTAATCGCTCTTTCTAG
EY935548       --> ATATGGAAAAAAATTGCAACAAAAAGCTATGGGGTAATCGCTCTTTCTAG
FD574906       --> ATATGGAAAAAAATTGCAACAAAAAGCTATGGGGTAATCGCTCTTTCTAG
FD983754       --> ATATGGAAAAAAATTGCAACAAAAAGCTATGGGGTAATCGCTCTTTCTAG

               151    -    201
UN20232        --> CAAACAACATGCAAACTAACCTGATAATTGTTAGTTTCATTTAATAGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570990       <-- ................TAACGTGATAATTGTTAGTTTCATTTAATAGGAT
EW726538       <-- ..................................................
EY939650       <-- ..................................................
FD550718       <-- ..................................................
FD948618       <-- ..................................................
EW730683       --> CAAACAACATGCAAACTAACCTGATAATTGTTAGTTTCATTTAATAGGAT
FD944375       --> CAAACAACATGCAAACTAACCTGATAATTGTTAGTTTCATTTAATAGGAT
FD546636       --> CAAACAACATGCAAACTAACCTGATAATTGTTAGTTTCATTTAATAGGAT
EY935548       --> CAAACAACATGCAAACTAACCTGATAATTGTTAGTTTCATTTAATAGGAT
FD574906       --> CAAACAACATGCAAACTAACCTGATAATTGTTAGTTTCATTTAATAGGAT
FD983754       --> CAAACAACATGCAAACTAACCTGATAATTGTTAGTTTCATTTAATAGGAT

               201    -    251
UN20232        --> TATATGTATCAAGCTTTTTGTTCATATGAGTTTGCATCCACAGGAATTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570990       <-- TATATGTATCAAGCTTTTTGTTCATATGAGTTTGCATCCACAGGAATTCC
EW726538       <-- ..................................................
EY939650       <-- ..................................................
FD550718       <-- ..................................................
FD948618       <-- ..................................................
EW730683       --> TATATGTATCAAGCTTTTTGTTCATATGAGTTTGCATCCACAGGAATTCC
FD944375       --> TATATGTATCAAGCTTTTTGTTCATATGAGTTTGCATCCACAGGAATTCC
FD546636       --> TATATGTATCAAGCTTTTTGTTCATATGAGTTTGCATCCACAGGAATTCC
EY935548       --> TATATGTATCAAGCTTTTTGTTCATATGAGTTTGCATCCACAGGAATTCC
FD574906       --> TATATGTATCAAGCTTTTTGTTCATATGAGTTTGCATCCACAGGAATTCC
FD983754       --> TATATGTATCAAGCTTTTTGTTCATATGAGTTTGCATCCACAGGAATTCC

               251    -    301
UN20232        --> AGGACCATACACAAGTCGGCATCGGTCACTAAACGCCCCAATGAGCCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570990       <-- AGGACCATACACAAGTCGGCATCGGTCACTAAACGCCCCAATGAGCCTTG
EW726538       <-- ..................................................
EY939650       <-- ..................................................
FD550718       <-- ..................................................
FD948618       <-- ..................................................
EW730683       --> AGGACCATACACAAGTCGGCATCGGTCACTAAACGCCCCAATGAGCCTTG
FD944375       --> AGGACCATACACAAGTCGGCATCGGTCACTAAACGCCCCAATGAGCCTTG
FD546636       --> AGGACCATACACAAGTCGGCATCGGTCACTAAACGCCCCAATGAGCCTTG
EY935548       --> AGGACCATACACAAGTCGGCATCGGTCACTAAACGCCCCAATGAGCCTTG
FD574906       --> AGGACCATACACAAGTCGGCATCGGTCACTAAACGCCCCAATGAGCCTTG
FD983754       --> AGGACCATACACAAGTCGGCATCGGTCACTAAACGCCCCAATGAGCCTTG

               301    -    351
UN20232        --> TTGCTACCTCCTTTAAGAACATCGAAGCCACCTGGCGATAAAGAGGTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570990       <-- TTGCTACCTCCTTTAAGAACATCGAAGCCACCTGGCGATAAAGAGGTGAG
EW726538       <-- .............................................aagag
EY939650       <-- ..................................................
FD550718       <-- ..................................................
FD948618       <-- ..................................................
EW730683       --> TTGCTACCTCCTTTAAGAACATCGAAGCCACCTGGCGATAAAGAGGTGAG
FD944375       --> TTGCTACCTCCTTTAAAAACATCGAAGCCACCTGGCGATAAAGAGGTGAG
FD546636       --> TTGCTACCTCCTTTAAGAACATCGAAGCCACCTGGCGATAGAGAGGTGAG
EY935548       --> TTGCTACCTCCTTTAAGAACATCGAAGCCACCTGGCGATAAAGAGGTGAG
FD574906       --> TTGCTACCTCCTTTAAGAACATCGAAGCCACCTGGCGATAAAGAGGTGAG
FD983754       --> TTGCTACCTCCTTTAAGAACATCGAAGCCACCTGGCGATAGAGAGGTGAG

               351    -    401
UN20232        --> TTGAATTTGAAATCGACAAGAATAGAAAGCTCGCAGGTTCCTGGAATGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570990       <-- TTGAATTTGAAGTCGACAAGAATAGAAAGCTCGCAGGTTCCTGGAATGGG
EW726538       <-- tgagtgattgAATCGACA-GAATA-AAAGCTCGCA--GTCCTG-AATGG-
EY939650       <-- ..........................AAGCTCGCAGGT-CCT-GAATGGG
FD550718       <-- ..................................................
FD948618       <-- ..................................................
EW730683       --> TTGAATTTGAAATCGACAAGAATAGAAAGCTCGCAGGTTCCTGGAATGGG
FD944375       --> TTGAATTTGAAATCGACAAGAATAGAAAGCTCGCAGGTTCCTGGAATGGG
FD546636       --> TTGAATTTGAAATCGACAAGAATAGAAAGCTCGCAGGTTCCTGGAATGGG
EY935548       --> TTGAATTTGAAATCGACAAGAATAGAAAGCTCGCAGGTTCCTGGAATGGG
FD574906       --> TTGAATTTGAAGTCGACAAGAATAGAAAGCTCGCAGGTTCCTGGAATGGG
FD983754       --> TTGAATTTGAAATCGACAAGAATAGAAAGCTCGCAGGTTCCTGGAATGGG

               401    -    451
UN20232        --> ACCTGGCTTGAACTGCCAGAGGTTGATCAAATGGTCAAACAGGCCGGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570990       <-- ACCTGGCTTGAACTGCCAGAGGTTGATCAAATGGTCAAACAGGCCGGTGT
EW726538       <-- AC-TG-CT-GA-CTGCCAGAGGT-GATCAAATG-TCAA-CAG-CCGGTGT
EY939650       <-- ACCTGGCTTGAACTGCCAGAGGTTGATCAAATGGTCAAACAGGCCGGTGT
FD550718       <-- ...............CCAGAGGT-GATCAAATG-TCAAACAGGCCG-TGT
FD948618       <-- ..................................................
EW730683       --> ACCTGGCTTGAACTGCCAGAGGTTGATCAAATGGTCAAACAGGCCGGTGT
FD944375       --> ACCTGGCTTGAACTGCCAAAGGTTGATCAAATGGTCAAACAGGCCGGTGT
FD546636       --> ACCTGGTTTGAAATGCCAGAGGTTGATCAAATGGTCAAACAGGCCGGTGT
EY935548       --> ACCTGGCTTGAACTGCCAGAGGTTGATCAAATGGTCAAACAGGCCGGTGT
FD574906       --> ACCTGGCTTGAACTGCCAGAGGTTGATCAAATGGTCAAACAGGCCGGTGT
FD983754       --> ACCTGGTTTGAACTGCCAGAGGTTGATCAAATGGTCAAACAGGCCGGTGT

               451    -    501
UN20232        --> CTCTCGCTGTCGTCTTAATCCATTTGGGTCTTTCGAACTCAACATGGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570990       <-- CTCTCGCTGTCGTCTTAATCCATTTGGGTCTTTCGAACTCAACATGGGAG
EW726538       <-- CTCTCGCTGTCGTCTTAATCCATTTGG-TCTTTCGAACTCAACATGGGAG
EY939650       <-- CTCTCGCTGTCGTCTTAATCCATTTGGGTCTTTCGAACTCAACATGGGAG
FD550718       <-- CTCTCGCTGTTGTCTTAATCCATTTGGGTCTTTCGAACTCAACATGGGAG
FD948618       <-- .............................CTTTCGAACTCAACATGGGAG
EW730683       --> CTCTCGCTGTCGTCTTAATCCATTTGGGTCTTTCGAACTCAACATGGGAG
FD944375       --> CTCTCGCTGTCGTCTTAATCCATTTGGGTCTTTCGAACTCAACATGGGAG
FD546636       --> CTCTCGCTGTTGTCTTAATCCATTTGGGTCTTTCGAACTCAACATGGGAG
EY935548       --> CTCTCGCTGTCGTCTTAATCCATTTGGGTCTTTCGAACTCAACATGGGAG
FD574906       --> CTCTCGCTGTCGTCTTAATCCATTTGGGTCTTTCGAACTCAACATGGGAG
FD983754       --> CTCTCACTGTTGTCTTAATCCATTTGGGTCTTTCGAACTCAATATGGGAG

               501    -    551
UN20232        --> ATGTAACTCTCAACAAGAAACTTGAAACCAATCTCGAGCTCAGCGTCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570990       <-- ATGTAACTCTCAACAAGAAACTTGAAACCAATCTCGAGCTCAGCGTCGAA
EW726538       <-- ATGTA-CTCTCAACAAGAAACTTGAAACCAATCTCGAGCTCAGCGTCGAA
EY939650       <-- ATGTAACTCTCAACAAGAAACTTGAAACCAATCTCGAGCTCAGCGTCGAA
FD550718       <-- ATGTAACTCTCAACAAGAAACTTGAAACCAATCTCGAGCTCAGCGTCGAA
FD948618       <-- ATGTAACTCTCAACAAGAAACTTGAAACCAATCTCGAGCTCAGCGTCGAA
EW730683       --> ATGTAACTCTCAACAAGAAACTTGAAACCAATCTCGAGCTCAGCGTCGAA
FD944375       --> ATGTAACTCTCAACAAGAAACTTGAAACCAATCTCGAGCTCAGCGTCGAA
FD546636       --> ATGTAACTCTCAACAAGAAACTTGAAACCAATCTCGAGCTCAGCGTCGAA
EY935548       --> ATGTAACTCTCAACAAGAAACTTGAAACCAATCTCGAGCTCAGCGTCGAA
FD574906       --> ATGTAACTCTCAACAAGAAACTTGAAACCAATCTCGAGCTCAGCGTCGAA
FD983754       --> ATGTAACTCTCAACAAGAAACTTGAAACCAATCTCGAGCTCAGCGTCGAA

               551    -    601
UN20232        --> AGAGCCATCAGAGTATTCTTTAAGAACCTCGGAGCGTTGACACCAAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570990       <-- AGAGCCATCAGAGTATTCTTTAAGAACCTCGGAGCGTTGACACCAAGGAA
EW726538       <-- AGAGCCATCAGAGTATTCTTTAAGAACCTCGGAGCGTTGACACCAAGGAA
EY939650       <-- AGAGCCATCAGAGTATTCTTTAAGAACCTCGGAGCGTTGACACCAAGGAA
FD550718       <-- AGAGCCATCAGAGTATTCTTTAAGAACCTCGGAGCGTTGACACCAAGGAA
FD948618       <-- AGAGCCATCAGAGTATTCTTTAAGAACCTCGGAGCGTTGACACCAAGGAA
EW730683       --> AGAGCCATCAGAGTATTCTTTAAGAACCTCGGAGCGTTGACACCAAGGAA
FD944375       --> AGAGCCATCAAAGTATTCTTTAAGAACCTCGGAGCGTTGACACCAAGGAA
FD546636       --> AGAGCCATCAGAGTATTCTTTAAGAACCTCGGAGCGTTGACACCAAGGAA
EY935548       --> AGAGCCATCAGAGTATTCTTTAAGAACCTCGGAGCGTTGACACCAAGGAA
FD574906       --> AGAGCCATCAGAGTATTCTTTAAGAACCTCGGAGCGTTGACACCAAGGAA
FD983754       --> AGAGCCATCAGAGTATTCTTTAAGAACCTCGGAGCGTTGACACCAAGGAA

               601    -    651
UN20232        --> CAAAGCCGTGGTACAAGTCTACAGCTAGAACTACATTAAACAATTGCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570990       <-- CAAAGCCGTGGTACAAGTCTACAGCTAGAACTACATTAAACAATTGCTCC
EW726538       <-- CAAAGCCGTGGTACAAGTCTACAGCTAGAACTACATTAAACAATTGCTCC
EY939650       <-- CAAAGCCGTGGTA-AAGTCTACAGCTAGAACTACATTAAACAATTGCTCC
FD550718       <-- CAAAGCCGTGGTACAAGTCTACAGCTAGAACTACATTAAACAATTGCTCC
FD948618       <-- CAAAGCCGTGGTACAAGTCTACAGCTAGAACTACATTAAACAATTGCTCC
EW730683       --> CAAAGCCGTGGTACAAGTCTACAGCTAGAACTACATTAAACAATTGCTCC
FD944375       --> CAAAGCCGTGGTACAAGTCTACAGCTAGAACTACATTAAACAATTGCTCC
FD546636       --> CAAAGCCGTGGTACAAGTCTACAGCTAGAACTACATTAAACAATTGCTCC
EY935548       --> CAAAGCCGTGGTA-AAGTCTACAGCTAGAACTACATTAAACAATTGCTCC
FD574906       --> CAAAGCCGTGGTACAAGTCTACAGCTAGAACTACATTAAACAATTGCTCC
FD983754       --> CAAAGCCGTGGTACAAGTCTACAGCTAGAACTACATTAAACAATTGCTCC

               651    -    701
UN20232        --> TGAGAATACCCCAAGACACGTCGCTCTTCATAGATCTTTGATAATTCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570990       <-- TGAGAATACCCCAAGACACGTCGCTCTTCATAGATCTTTGATAATTCACC
EW726538       <-- TGAGAATACCCCAAGACACGTCGCTCTTCATAGATCTTTGATAATTCACC
EY939650       <-- TGAGAATACCCCAAGACACGTCGCTCTTCATAGATCTTTGATAATTCACC
FD550718       <-- TGAGAATACCCCAAGACACGTCTCTCTTCGTAGATCTTTGATAATTCACC
FD948618       <-- TGAGAATACCCCAAGACACGTCGC--TTCATAGATCTTTGATAATTCACC
EW730683       --> TGAGAATACCCCAAGACACGTCGCTCTTCATAGATCTTTGATAATTCACC
FD944375       --> TGAGAATACCCCAAGACACGTCGCT--TCATAGATCTTTGATAATTCACC
FD546636       --> TGAGAATACCCCAAGACACGTCTCTCTTCGTAGATCTTTGATAATTCACC
EY935548       --> TGAGAATACCCCAAGACACGTCGCTCTTCATAGATCTTTGATAATTCACC
FD574906       --> TGAGAATACCCCAAGACACGTCGCTCTTCATAGATCTTTGATAATTCACC
FD983754       --> TGAGAATACCCCAAGACACGTCTCTCTTCGTAGATCTTTGATAATTCACC

               701    -    751
UN20232        --> ACCACCTTCTTCCCCATCTCCACAACCCAGAAAATGCCGTCTTTGAATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570990       <-- ACCACCTTCTTCCCCATCTCCACAACCCAGAAAATGCCGTCTTTGAATTA  Raphanus sativus cv Early Scarlet Globe
EW726538       <-- ACCACCTTCTTCCCCATCTCCACAACCCAGAAAATGCCGTCTTTGAATTA  Raphanus sativus cv Early Scarlet Globe
EY939650       <-- ACCACCTTCTTCCCCATCTCCACAACCCAGAAAATGCCGTCTTTGAATTA  Raphanus sativus cv Early Scarlet Globe
FD550718       <-- ACCACCTTCTTCCCCATCTCCACAACCCAGAAAATGCCGTCTTTGATTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD948618       <-- ACCACCTTCTTCCCCATCTCCACAACCCAGAAAATGCCGTCTTTGGA-TA  Raphanus sativus cv Early Scarlet Globe
EW730683       --> ACCACCTTCTTCCCCATCTCCACAACCCAGAAAATGCCGTCTTTGA-TTA  Raphanus sativus cv Early Scarlet Globe
FD944375       --> ACCACCTTCTTCCCCATCTCCACAACCCAGAAAATGCCGTCTTTGGA-TA  Raphanus sativus cv Early Scarlet Globe
FD546636       --> ACCACCTTCTTCCCCATCTCCACAACCCAGAAAATGCCGTCTTTGATTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935548       --> ACCACCTTCTTCCCCATCTC..............................  Raphanus sativus cv Early Scarlet Globe
FD574906       --> ACCACCTTCTTCCC....................................  Raphanus sativus cv Early Scarlet Globe
FD983754       --> ACCACCTTCTTCCCCATCTCCACAACCCAGAAAATGCCGTCTTTGATTTA  Raphanus raphanistrum subsp. landra

               751    -    801
UN20232        --> AGCTCCCAGTACCGAAAGCGACTCTTCTACCATCATTATCGGACATCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570990       <-- AGCTCCCAGTACCGAAAGAGACTCTTCTACCATCATTATCGGACATCAAC
EW726538       <-- AGCTCCCAGTACCGAAAGCGACTCTTCTACCATCATTATCGGACATCAAC
EY939650       <-- AGCTCCCAGTACCGAAAGCGACTCTTCTACCATCATTATCGGACATCAAC
FD550718       <-- AGCTCCCAGTACCGAAAGAGACTCTTCTACCATCATTATCGGACATCAAC
FD948618       <-- AGCTCCCAGTACCGAAAGCGACTCTTCTACCATCATTATCGGACATCAAC
EW730683       --> AGCTCCCAGTACCGAAAGCGACTC..........................
FD944375       --> AGCTCCCAGTACCGAAAGCGACTCTTCTACCATCATTATCGGACATCAAC
FD546636       --> AGCTCCCAGTACCGAAAGAGACTCTTCTACCATCATTATCGGACAT....
EY935548       --> ..................................................
FD574906       --> ..................................................
FD983754       --> AGCTCCCAGTACCGAAAGa...............................

               801    -    851
UN20232        --> CCGTGAGAAGAGCATCTATCTACCCCCGAAAGAGAACCAAATCGGCGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570990       <-- CCGTGAGAAGAGCATCc.................................
EW726538       <-- CCGTGAGAAGAGCATCTATCTACCCCCGAAAGAGAACCAAATCGGCGAAA
EY939650       <-- CCGTGAGAAGAGCATCTATCTACCCCCGAAAGAGAACCAAATCGGCGAAA
FD550718       <-- CCGTGAGAAGAGCATCTACCTACCCCCGAAAGAGAGCCAAATCGGCGAAA
FD948618       <-- CCGTGAGAAGAGCATCTATCTACCCCCGAAAGAGAACCAAATCGGCGAAA
EW730683       --> ..................................................
FD944375       --> CCGTGAGAAGAGCATCTATCTACCC.........................
FD546636       --> ..................................................
EY935548       --> ..................................................
FD574906       --> ..................................................
FD983754       --> ..................................................

               851    -    901
UN20232        --> TCGATTCCATTTAAAACTGCTCTGAACGATCCCGGAGCGATTAATCGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570990       <-- ..................................................
EW726538       <-- TCGATTCCATTTAAAACTGCTCTGAACGATCCCGGAGCGATTAATCGGGC
EY939650       <-- TCGATTCCATTTAAAACTGCTCTGAACGATCCCGGAGCGATTAATCGGGC
FD550718       <-- TCGATTCCATTTAAAACTGCTCGGAACGATCCCGGAGCGATTAATCGGGC
FD948618       <-- TCGATTCCATTTAAAACTGCTCTGAACGATCCCGGAGCGATTAATCGGGC
EW730683       --> ..................................................
FD944375       --> ..................................................
FD546636       --> ..................................................
EY935548       --> ..................................................
FD574906       --> ..................................................
FD983754       --> ..................................................

               901    -    951
UN20232        --> TCCTGATTGCGTTTCGACATGAAATTAAGCTGAACAAAGCTCTCGAGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570990       <-- ..................................................
EW726538       <-- TCCTGATTGCGTTTCGACATGAAATTAAGCTGAACAAAGCTCTCGAGCCA
EY939650       <-- TCCTGATTGCGTTTCGACATGAAATTAAGCTGAACAAAGCTCTCGAGCCA
FD550718       <-- TCCTGATTGCGTTTCGACATGAAATTAAGCTGAACAAAGCTCTCGAGCCA
FD948618       <-- TCCTGATTGCGTTTCGACATGAAATTAAGCTGAACAAAGCTCTCGAGCCA
EW730683       --> ..................................................
FD944375       --> ..................................................
FD546636       --> ..................................................
EY935548       --> ..................................................
FD574906       --> ..................................................
FD983754       --> ..................................................

               951    -   1001
UN20232        --> GACATAAACGGTCGCATTATTACCGAAAACAAACGTGTCGGAGAGAGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570990       <-- ..................................................
EW726538       <-- GACATAAACGGTCGCATTATTACCGAAAACAAACGTGTCGGAGAGAGAGT
EY939650       <-- GACATAAACGGTCGCATTATTACCGAAAACAAACGTGTCGGAGAGAGAGT
FD550718       <-- GACATAAACGGTCGCATTATTACCGAAAACAAACGTGTCGGAGAGAGAGT
FD948618       <-- GACATAAACGGTCGCATTATTACCGAAAACAAGCGTGTCGGAGAGAGAGT
EW730683       --> ..................................................
FD944375       --> ..................................................
FD546636       --> ..................................................
EY935548       --> ..................................................
FD574906       --> ..................................................
FD983754       --> ..................................................

               1001   -   1051
UN20232        --> TTAGGGTTGCAAACAGAGACGACGAAAGGCCAAATCTTTTTGATTCGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570990       <-- ..................................................
EW726538       <-- TTAGGGTTGCAAACAGAGACGACGAAAGGCCAAATCTTTTTGATTCGATT
EY939650       <-- TTAGGGTTGCAAACAGAGACGACGAAAGGCCAAATCTTTTTGATTCGATT
FD550718       <-- TTAGGGTTGCAAACAGAGACGACGAAAGGCCAAATCTTTTTGATTCGATT
FD948618       <-- TTAGGGTTGCAAACAGAGACGACGAAAGGCCAAATCTTTTTGATTCGATT
EW730683       --> ..................................................
FD944375       --> ..................................................
FD546636       --> ..................................................
EY935548       --> ..................................................
FD574906       --> ..................................................
FD983754       --> ..................................................

               1051   -   1101
UN20232        --> AGCTACCGTTGAGAAAGAAAAAAACCAACCAATAGACCCCTCTTCTTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570990       <-- ..................................................
EW726538       <-- AGCTACCGTTGAGAAAGAAAAAAACCAACCAATAGACCCCTCTTCTTCAC
EY939650       <-- AGCTACCGTTGAGAAAGAAAAAAACCAACCAATAGACCCCTCTTCTTCAC
FD550718       <-- AGCTACCGTTGAGAAAGAAAAAA-CCAATCAAAAGACCC-TCTTCTTCAC
FD948618       <-- AGCTACCGTTGAGAAAGAAAAAAACCAACCAATAGACCCCTCTTCTTCAC
EW730683       --> ..................................................
FD944375       --> ..................................................
FD546636       --> ..................................................
EY935548       --> ..................................................
FD574906       --> ..................................................
FD983754       --> ..................................................

               1101   -   1151
UN20232        --> CAAGCAATGGAGAGAGAGAGAGAGAGACGTAATCTACAGCGCTATATGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570990       <-- ..................................................
EW726538       <-- CAAGCAATGGAGAGAGAGAGAGAGAGACGTAATCTACAGCGCTATATGCT
EY939650       <-- CAAGCAATcc........................................
FD550718       <-- CAAGCAATagcc......................................
FD948618       <-- CAAGCAATGGAGAGAGAGAGAGAGAGACGTAATCTACAGCGCTATATGCT
EW730683       --> ..................................................
FD944375       --> ..................................................
FD546636       --> ..................................................
EY935548       --> ..................................................
FD574906       --> ..................................................
FD983754       --> ..................................................

               1151   -   1201
UN20232        --> CGCAGCAACCC
                   ~~~~~~~~~~~
FD570990       <-- ...........
EW726538       <-- CGCAGCAACCC
EY939650       <-- ...........
FD550718       <-- ...........
FD948618       <-- CGCAGCcc...
EW730683       --> ...........
FD944375       --> ...........
FD546636       --> ...........
EY935548       --> ...........
FD574906       --> ...........
FD983754       --> ...........