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Alignment for radish unigene UN20248

               1      -     51
UN20248        --> GGGGACAAGAGTTGGAATCAAACCGTCTCCTGTTGTAGCAGCATTCTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736310       <-- ..................................................
FD552516       <-- ..................................................
EV543594       <-- ..................................................
FD582374       <-- ..................................................
EX892548       <-- ..................................................
EY920825       <-- ..................................................
EY925322       --> GGGGACAAGAGTTGGAATCAAACCGTCTCCTGTTGTAGCAGCATTCTCTT
FD556168       --> ..GGACAAGAGTTGGAATCAAACCGTCTCCTGTTGTAGCAGCATTCTCTT
FD948605       --> ..............................................gCTT
EX904640       --> ..................................................
EV547784       --> ..................................................
FD578188       --> ..................................................
EW731916       --> ..................................................
FD578397       --> ..................................................
EX888648       --> ..................................................

               51     -    101
UN20248        --> CGAGAGGACCCAACTTTCTCTCCCTGGAGATCTTGAAACCGGACTTGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736310       <-- ..................................................
FD552516       <-- ..................................................
EV543594       <-- ..................................................
FD582374       <-- ..................................................
EX892548       <-- ..................................................
EY920825       <-- ..................................................
EY925322       --> CGAGAGGACCCAACTTTCTCTCC-TGGAGATCTTGAAACCGGACTTGCTA
FD556168       --> CGAGAGGACCCAACTTTCTCTCCCTGGAGATCTTGAAACCGGACTTGCTA
FD948605       --> CGAGAGGACCCAACTTTCTCTCCCTGGAGATCTTGAAACCGGACTTGCTA
EX904640       --> .................................gGAAACCGGACTTGCTA
EV547784       --> ..........................................gCTTGCTA
FD578188       --> ................................................gA
EW731916       --> ..................................................
FD578397       --> ..................................................
EX888648       --> ..................................................

               101    -    151
UN20248        --> GCTCCGGGAGTGAACATTCTCGCGGCTTGGTCTGGAGACATGGCGCCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736310       <-- ..................................................
FD552516       <-- ..................................................
EV543594       <-- ..................................................
FD582374       <-- ..................................................
EX892548       <-- ..................................................
EY920825       <-- ..................................................
EY925322       --> GCTCCGGGAGTGAACATTCTCGCGGCTTGGTCTGGAGACATGGCGCCATC
FD556168       --> GCTCCGGGAGTGAACATTCTCGCGGCTTGGTCTGGAGACATGGCGCCATC
FD948605       --> GCTCCGGGAGTGAACATTCTCGCGGCTTGGTCTGGAGACATGGCGCCATC
EX904640       --> GCTCCGGGAGTGAACATTCTCGCGGCTTGGTCTGGAGACATGGCGCCATC
EV547784       --> GCTCCAGGTGTGAACATTCTCGCGGCTTGGTCTGGAGACATGGCGCCGTC
FD578188       --> GCTCCGGGAGTGAACATTCTCGCGGCTTGGTCTGGAGACATGGCGCCATC
EW731916       --> ..................................................
FD578397       --> ..................................................
EX888648       --> ..................................................

               151    -    201
UN20248        --> GAGTCTGTCGTCTGACAAAAGGAGGGTTAAGTTCAATATACTGTCGGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736310       <-- ..................................................
FD552516       <-- ..................................................
EV543594       <-- ..................................................
FD582374       <-- ..................................................
EX892548       <-- ..................................................
EY920825       <-- ..................................................
EY925322       --> GAGTTTGTCGTCTGACAAAAGGAGGGTTAAGTTCAATATACTGTCGGGGA
FD556168       --> GAGTTTGTCGTCTGACAAAAGGAGGGTTAAGTTCAATATACTGTCGAGGA
FD948605       --> GAGTCTGTCGTCTGACAAAAGGAGGGTTAAGTTCAATATACTGTCGGGGA
EX904640       --> GAGTCTGTCGTCTGACAAAAGGAGGGTTAAGTTCAATATACTGTCGGGAA
EV547784       --> GAGTCTGTCGTCTGACAAAAGGAGGGTTAAGTTCAATATACTGTCGGGAA
FD578188       --> GAGTCTGTCGTCTGACAAAAGGAGGGTTAAGTTCAATATACTGTCGGGAA
EW731916       --> ..................................................
FD578397       --> ..................................................
EX888648       --> ..................................................

               201    -    251
UN20248        --> CTTCCATGTCGTGTCCTCACGTGAGCGGTGTGGCTGCTTTGATCAGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736310       <-- ...........TGTCCTCACGTGAGCGGTGTGGCTGCTTTGATCAGATCA
FD552516       <-- ..................................................
EV543594       <-- ..................................................
FD582374       <-- ..................................................
EX892548       <-- ..................................................
EY920825       <-- ..................................................
EY925322       --> CTTCCATGTCGTGTCCTCACGTGAGCGGTGTGGCTGCTTTGATCAGATCG
FD556168       --> CTTCCATGTCGTGTCCTCACGTGAGCGGTGTGGCTGCTTTGATCAGATCG
FD948605       --> CTTCCATGTCGTGTCCTCACGTGAGCGGTGTCGCTGCTTTGATCAGATCA
EX904640       --> CTTCCATGTCGTGTCCTCACGTGAGCGGTGTCGCTGCTTTGATCAGATCA
EV547784       --> CTTCCATGTCGTGTCCTCACGTGAGCGGTGTGGCTGCTTTGATCAGATCA
FD578188       --> CTTCCATGTCGTGTCCTCACGTGAGCGGTGTCGCTGCTTTGATCAGATCA
EW731916       --> .....ggGTCGTGTCCTCACGTGAGCGGTGTGGCTGCTTTGATCAGATCA
FD578397       --> ..................................................
EX888648       --> ..................................................

               251    -    301
UN20248        --> AGGCATCCGGATTGGAGTCCCGCAGCGGTGAAATCAGCTCTCATGACGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736310       <-- AGGCATCCGGATTGGAGTCCCGCAGCGGTCAAATCGGCTCTCATGACGAC
FD552516       <-- ..............GAGTCCCGCAGCGGTGAAATCAGCTCTCATGACGAC
EV543594       <-- .......................................CTCATGACGAC
FD582374       <-- ..................................................
EX892548       <-- ..................................................
EY920825       <-- ..................................................
EY925322       --> AGGCATCCGGATTGGAGTCCCGCAGCGGTGAAATCAGCTCTCATGACGAC
FD556168       --> AGGCATCCGGATTGGAGTCCCGCAGCGGTGAAATCAGCTCTCATGACGAC
FD948605       --> AGGCATCCGGATTGGAGTCCCGCAGCGGTGAAATCAGCTCTCATGACGAC
EX904640       --> AGGCATCCGGATTGGAGTCCCGCAGCGGTCAAATCGGCTCTCATGACGAC
EV547784       --> AGGCATCCGGATTGGAGTCCCGCAGCGGTGAAATCAGCTCTCATGACGAC
FD578188       --> AGGCATCCGGATTGGAGTCCCGCAGCGGTCAAATCGGCTCTCATGACGAC
EW731916       --> AGGCATCCGGATTGGAGTCCCGCAGCGGTCAAATCGGCTCTCATGACGAC
FD578397       --> ..................................................
EX888648       --> ..................................................

               301    -    351
UN20248        --> GGCTTACGTTCACGACAACATGCTGAAGCCTCTTACGGATGCAGCGGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736310       <-- GGCTTACGTTCACGACAACATGCTTAAGCCTCTTACGGATGCAGCGGGAG
FD552516       <-- GGCTTACGTTCACGACAACATGCTGAAGCCTCTTACGGATGCAGCGGGAG
EV543594       <-- GGCTTACGTTCACGACAACATGCTGAAGCCTCTTACGGATGCAGCGGGAG
FD582374       <-- ..................................................
EX892548       <-- ..................................................
EY920825       <-- ..................................................
EY925322       --> GGCTTACGTTCACGACAACATGCTGAAGCCTCTTGCGGATGCAGCGGGAG
FD556168       --> GGCTTACGTTCACGACAACATGCTGAAGCCTCTTACGGATGCAGCGGGAG
FD948605       --> GGCTTACGTTCACGACAACATGCTGAAGCCTCTTACGGATGCAGCAGGAG
EX904640       --> GGCTTAC-CTCACGACAACATGCTTAAACCTCTTACGGATGCAGCGGGAG
EV547784       --> GGCTTACGTTCACGACAACATGCTGAAGCCTCTTACGGATGCAGCGGGAG
FD578188       --> GGCTTACGTTCACGACAACATGCTTAAGCCTCTTACGGATGCAGCGGGAG
EW731916       --> GGCTTACGTTCACGACAACATGCTTAAGCCTCTTACGGATGCAGCGGGAG
FD578397       --> ..................................................
EX888648       --> ..................................................

               351    -    401
UN20248        --> AAGAACCTTCGTCGCCTTATGATCACGGTGCTGGACATATAGATCCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736310       <-- AAGAACCTTCGTCGCCTTATGATCACGGTGCTGGACATATAGATCCTTTG
FD552516       <-- AAGAACCTTCGTCGCCTTATGATCACGGTGCTGGACATATAGATCCTTTG
EV543594       <-- AAGAACCTTCGTCGCCTTATGATCACGGTGCTGGACATATAGATCCTTTG
FD582374       <-- ...........TCGCCTTATGATCACGGTGCTGGACATATAGATCCTTTG
EX892548       <-- ...................TGATCACGGTGCTGGACATATAGATCCTTTG
EY920825       <-- ........................................AGATCCTTTG
EY925322       --> AAGAACCTTCGTCGCCTTATGATCACGGTGCTGGACATATAGATCCTTTG
FD556168       --> AAGAACCTTCGTCGCCTTATGATCACGGTGCTGGACATATAGATCCTTTG
FD948605       --> CAGAACCTTCGTCGCCTTATGATCACGGTGCTGGACATATAGATCCTTTG
EX904640       --> AAGAACCTTCGTCGCCTTATGATCACGGTGCTGGACATATAGATCCTTTG
EV547784       --> AAGAACCTTCGTCGCCTTATGATCACGGTGCTGGACATATAGATCCTTTG
FD578188       --> AAGAACCTTCGTCGCCTTATGATCACGGTGCTGGACATATAGATCCTTTG
EW731916       --> AAGAACCTTCGTCGCCTTATGATCACGGTGCTGGACATATAGATCCTTTG
FD578397       --> .............................gggGGACATATAGATCCTTTG
EX888648       --> ....................................ATATAGATCCTTTG

               401    -    451
UN20248        --> AAAGCTATAGATCCTGGTCTTGTCTACGACATTGGACCTCAGGAGTATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736310       <-- AAAGCTATAGATCCTGGTCTTGTCTACGACATTGGACCTCAGGAGTGTTT
FD552516       <-- AAAGCTATAGATCCTGGTCTTGTCTACGACATTGGACCTCAGGAGTATTT
EV543594       <-- AAAGCTATAGATCCTGGTCTTGTCTACGACATTGGACCTCAGGAGTATTT
FD582374       <-- AAAGCTATAGATCCTGGTCTTGTCTACCACATTGGACCTCAGGAGTATTT
EX892548       <-- AAAGCTATAGATCCTGGTCTTGTCTACGACATTGGACCTCAGGAGTATTT
EY920825       <-- AAAGCTATAGATCCTGGTCTTGTCTACGACATTGGACCTCAGGAGTATTT
EY925322       --> AAAGCTATAGATCCTGGTCTTGTCTACGACATTGGACCTCAGGAGTATTT
FD556168       --> AAAGCTATAGATCCTGGTCTTGTCTACGACATTGGACCTCAGGAGTATTT
FD948605       --> AAAGCTATAGATCCTGGTCTTGTCTACGACATTGGACCTCAGGAGTATTT
EX904640       --> AAAGCTATAGATCCTGGTTTTGTCTACCACATTGGACCTCAGGAGTATTT
EV547784       --> AAAGCTATAGATCCTGGTCTTGTCTACGACATTGGACCTCAGGAGTATTT
FD578188       --> AAAGCTATAGATCCTGGTCTTGTCTACCACATTGGACCTCAGGAGTATTT
EW731916       --> AAAGCTATAGATCCTGGTCTTGTCTACGACATTGGACCTCAGGAGTGTTT
FD578397       --> AAAGCTATAGATCCTGGTCTTGTCTACGACATTGGACCTCAGGAGTATTT
EX888648       --> AAAGCTATAGATCCTGGTCTTGTCTACGACATTGGACCTCAGGAGTATTT

               451    -    501
UN20248        --> TGATTTCCTCTGCACTCAAGAGTTGAGTCCTTCGCAGCTCAAGGTCTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736310       <-- TGATTTCCTCTGCACTCAAGAGTTGAGTCCTTCGCAGCTCAAGGTCTTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD552516       <-- TGATTTCCTCTGCACTCAAGAGCTGAGTCCTTCGCAGCTCAAGGTCTTCA  Raphanus raphanistrum subsp. landra
EV543594       <-- TGATTTCCTCTGCACTCAAGAGTTGAGTCCTTCGCAGCTCAAGGTCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD582374       <-- TGATTTCCTCTGCACTCAAGAGTTGAGTCCTTCGCAGCTCAAGGTCTTCA  Raphanus sativus cv Rat-Tail Radish #3870
EX892548       <-- TGATTTCCTCTGCACTCAAGAGTTGAGTCCTTCGCAGCTCAAGGTCTTCA  Raphanus sativus var. oleiformis
EY920825       <-- TGATTTCCTCTGCACTCAAGAGCTGAGTCCTTCGCAGCTCAAGGTCTTCA  Raphanus raphanistrum subsp. landra
EY925322       --> TGATTTCCTCTGCACTCAAGAGCTGAGTCCTTCGCAGCTCAAGGTCTTCA  Raphanus raphanistrum subsp. landra
FD556168       --> TGATTTCCTCTGCACTCAAGAGCTGAGTCCTTCGCAGCTCAAGGTCTTCA  Raphanus raphanistrum subsp. landra
FD948605       --> TGATTTCCTCTGCACTCAAGAGTTAAGTCCTTCGCAGCTCAAGGTCTTCA  Raphanus sativus cv Early Scarlet Globe
EX904640       --> TGATTTCCTCTGCACTCAAGAGTTGAGTCCTTCGCAGCTCAAGGTCTTCA  Raphanus sativus cv Rat-Tail Radish #3870
EV547784       --> TGATTTCCTCTGCACTCAAGAGTTGAGTCCTTCGCAGCTCAAGGTCTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD578188       --> TGATTTCCTCTGCACTCAAGAGTTGAGTCCTTCGCAGCTCAAGGTCTTCA  Raphanus sativus cv Rat-Tail Radish #3870
EW731916       --> TGATTTCCTCTGCACTCAAGAGTTGAGTCCTTCGCAGCTCAAGGTCTTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD578397       --> TGATTTCCTCTGCACTCAAGAGTTGAGTCCTTCGCAGCTCAAGGTCTTCA  Raphanus sativus cv Rat-Tail Radish #3870
EX888648       --> TGATTTCCTCTGCACTCAAGAGTTGAGTCCTTCGCAGCTCAAGGTCTTCA  Raphanus sativus var. oleiformis

               501    -    551
UN20248        --> CAAAGCATTCGAACAGATCTTGCAAACACAGTCTTGCCGGTAATAACCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736310       <-- CAAAGCATTCGAACAGATCTTGCAAACACAGTCTTGCCGGTAATAACCCT  Raphanus sativus cv Rat-Tail Radish #3870
FD552516       <-- CAAAGCATTCGAACAGATCTTGCAAACACAGCCTTGCCGGTAATAACCCT  Raphanus raphanistrum subsp. landra
EV543594       <-- CAAAGCATTCGAACAGATCTTGCAAACACAGTCTTGCCGGTAATAACCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD582374       <-- CAAAGCATTCGAACAGATCTTGCAAACACAGTCTTGCCGGTAATAACCCT  Raphanus sativus cv Rat-Tail Radish #3870
EX892548       <-- CAAAGCATTCGAACAGATCTTGCAAACACAGTCTTGCCGGTAATAACCCT  Raphanus sativus var. oleiformis
EY920825       <-- CAAAGCATTCGAACAGATCTTGCAAACACAGCCTTGCCGGTAATAACCCT  Raphanus raphanistrum subsp. landra
EY925322       --> CAAAGCATTCGAACAGATCTTGCAAACACAGCCTTGCCGGTAATAACCCT  Raphanus raphanistrum subsp. landra
FD556168       --> CAAAGCATTCGAACAGATCTTGCAAACACAGCCTTGCCGGTAATAACCCT  Raphanus raphanistrum subsp. landra
FD948605       --> CAAAGCATTCGAACAGATCTTGCAAACACAGTCTTGCCGGTAATAACCCT  Raphanus sativus cv Early Scarlet Globe
EX904640       --> CAAAGCATTCGAACAGATCTTGCAAACACAGTCTTGCCGGTAATAACCCT  Raphanus sativus cv Rat-Tail Radish #3870
EV547784       --> CAAAGCATTCGAACAGATCTTGCAAACACAGTCTTGCCGGTAATAACCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD578188       --> CAAAGCATTCGAACAGATCTTGCAAACACAGTCTTGCCGGTAATAACCCT  Raphanus sativus cv Rat-Tail Radish #3870
EW731916       --> CAAAGCATTCGAACAGATCTTGCAAACACAGTCTTGCCGGTAATAACCCT  Raphanus sativus cv Rat-Tail Radish #3870
FD578397       --> CAAAGCATTCGAACAGATCTTGCAAACACAGTCTTGCCGGTAATAACCCT  Raphanus sativus cv Rat-Tail Radish #3870
EX888648       --> CAAAGCATTCGAACAGATCTTGCAAACACAGTCTTGCCGGTAATAACCCT  Raphanus sativus var. oleiformis

               551    -    601
UN20248        --> GGAAACTTGAACTACCCTGCGATTTCAGCTTTGTTCCCAGAGAACACACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736310       <-- GGAAACTTGAACTACCCTGCGATTTCAGCTTTGTTCCCAGAGAACACACG  Raphanus sativus cv Rat-Tail Radish #3870
FD552516       <-- GGAAACTTGAACTACCCTGCGATTTCAGCTTTGTTCCCAGAGAACACACT  Raphanus raphanistrum subsp. landra
EV543594       <-- GGAAACTTGAACTACCCTGCGATTTCAGCTTTGTTCCCAGAAAACACACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD582374       <-- GGAAACTTGAACTACCCTGCGATTTCAGCTTTGTTCCCAGAGAACACACG  Raphanus sativus cv Rat-Tail Radish #3870
EX892548       <-- GGAAACTTGAACTACCCTGCGATTTCAGCTTTGTTCCCAGAGAACACACG  Raphanus sativus var. oleiformis
EY920825       <-- GGAAACTTGAACTACCCTGCGATTTCAGCTTTGTTCCCAGAGAACACACT  Raphanus raphanistrum subsp. landra
EY925322       --> GGAAACTTGAACTACCCTGCGATTTCAGCTTTGTTCCCAGAGAACACACT  Raphanus raphanistrum subsp. landra
FD556168       --> GGAAACTTGAACTACCCTGCGATTTCAGCTTTGTTCCCAGAGAACACACT  Raphanus raphanistrum subsp. landra
FD948605       --> GGAAACTTGAACTACCCTGCGATTTCAGCTTTGTTCCCAGAGAACACACA  Raphanus sativus cv Early Scarlet Globe
EX904640       --> GGAAACTTGAACTACCCTGCGATTTCAGCTTTGTTCCCAGAGAACACACG  Raphanus sativus cv Rat-Tail Radish #3870
EV547784       --> GGAAACTTGAACTACCCTGCGATTTCAGCTTTGTTCCCAGAAAACACACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD578188       --> GGAAACTTGAACTACCCTGCGATTTCAGCTTTGTTCCCAGAGAACACACG  Raphanus sativus cv Rat-Tail Radish #3870
EW731916       --> GGAAACTTGAACTACCCTGCGATTTCAGCTTTGTTCCCAGAGAACACACG  Raphanus sativus cv Rat-Tail Radish #3870
FD578397       --> GGAAACTTGAACTACCCTGCGATTTCAGCTTTGTTCCCAGAGAACACACG  Raphanus sativus cv Rat-Tail Radish #3870
EX888648       --> GGAAACTTGAACTACCCTGCGATTTCAGCTTTGTTCCCAGAGAACACACG  Raphanus sativus var. oleiformis

               601    -    651
UN20248        --> TGTTAAAGCTATGACACTTAGAAGAACCGTGACCAATGTTGGTCCTCACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736310       <-- TGTTAAAGCTATGACACTTAGAAGAACCGTGACCAATGTTGGTCCTCACG
FD552516       <-- TGTTAAAGCTATGACACTTAGAAGAACCGTGACCAATGTTGGTCCTCACG
EV543594       <-- TGTTAAAGCTATGACACTTAGAAGAACCGTGACCAACGTTGGTCCTCACG
FD582374       <-- TGTTAAAGCTATGACACTTAGAAGAACCGTGACCAATGTTGGTCCTCACG
EX892548       <-- TGTTAAAGCTATGACACTTAGAAGAACCGTGACCAATGTTGGTCCTCACG
EY920825       <-- TGTTAAAGCTATGACACTTAGAAGAACCGTGACCAATGTTGGTCCTCACG
EY925322       --> TGTTAAAGCTATGACACTTAGAAGAACCGTGACCAATGTTGGTCCTCACG
FD556168       --> TGTTAAAGCTATGACACTTAGAAGAACCGTGACCAATGTTGGTCCTCACG
FD948605       --> TCTTAAAGCCATGACACTTAGAAGAACAGTGACCAATGTTGGTCCTCACG
EX904640       --> TGTTAAAGCTATGACACTTAGAAGAACCGTGACCAATGTTGGTCCTCACG
EV547784       --> TGTTAAAGCTATGACACTTAGAAGAACCGTGACCAACGTTGGTCCTCACG
FD578188       --> TGTTAAAGCTATGACACTTAGAAGAACCGTGACCAATGTTGGTCCTCACG
EW731916       --> TGTTAAAGCTATGACACTTAGAAGAACCGTGACCAATGTTGGTCCTCACG
FD578397       --> TGTTAAAGCTATGACACTTAGAAGAACCGTGACCAATGTTGGTCCTCACG
EX888648       --> TGTTAAAGCTATGACACTTAGAAGAACCGTGACCAATGTTGGTCCTCACG

               651    -    701
UN20248        --> TTTCAAGCTACAAGGTCTCTGTCTCTCCTTTCAAAGGCGCAACCGTCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736310       <-- TTTCAAGCTACAAGGTCTCTGTCTCTCCTTTCAAAGGCGCAACCGTCACA
FD552516       <-- TTTCAAGCTACAAGGTCTCTGTCTCTCCTTTCAAAGGCGCAACCGTCACA
EV543594       <-- TTTCGAGCTACAAGGTCTCTGTCTCTCCTTTCAAAGGCGCAACCGTCATA
FD582374       <-- TTTCAAGCTACAAGGTCTCTGTCTCTCCTTTCAAAGACGCAACCGTCACA
EX892548       <-- TTTCAAGCTACAAGGTCTCTGTCTCTCCTTTCAAAGGCGCAACCGTCACA
EY920825       <-- TTTCAAGCTACAAGGTTTCTGTCTCTCCTTTCAAAGGCACAACCGTCACA
EY925322       --> TTTCAAGCTACAAG-TCTCTGTCTCTCCTTTCAA-GGCACAACCGTCACA
FD556168       --> TTTCAAGCTACAAG-TCTCTGTCTCTCCTTTCAAAG-CGCAACCGTCACA
FD948605       --> TTTCAAGCTA........................................
EX904640       --> TTTCAAGCTACAAGGTCTCTGTCTCTCCTTTCAAAGGCGCAACCGTCACA
EV547784       --> TTTCGAGCTACAAGGTCTCTGTCTCTCCTTTCAAAGGCGCAACCGTCATA
FD578188       --> TTTCAAGCTACAAAGTCTCTGTCTCTCCTTTCAAAGACGCAACCGTCACA
EW731916       --> TTTCAAGCTACAAGGTCTCTGTCTCTCCTTTCAAAGGCGCAACCGTCACA
FD578397       --> TTTCAAGCTACAAGGTCTCTGTCTCTCCTTTCAAAGGCGCAACCGTCACA
EX888648       --> TTTCAAGCTACAAGGTCTCTGTCTCTCCTTTCAAAGGCGCAACCGTCACA

               701    -    751
UN20248        --> GTCCAGCCAAAGACACTCAATTTCACTACGAAACACCAGAAGCTTTCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736310       <-- GTCCAGCCAAGGACACTCAATTTCACTACGAAACACCAGAAGCTTTCCTA  Raphanus sativus cv Rat-Tail Radish #3870
FD552516       <-- GTCCAGCCAAAGACACTCAATTTCACTGCGAAACACCAGAAGCTTTCCTA  Raphanus raphanistrum subsp. landra
EV543594       <-- GTCCAGCCAAAGACACTCAATTTCACTGCGAAACACCAGAAGCTTTCCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD582374       <-- GTCCAGCCAAAGACACTCAATTTCACTACGAAACACCAGAAGCTTTCCTA  Raphanus sativus cv Rat-Tail Radish #3870
EX892548       <-- GTCCAGCCAAGGACACTCAATTTCACTACGAAACACCAGAAGCTTTCCTA  Raphanus sativus var. oleiformis
EY920825       <-- GTCCAGCCAAAGACACTCAATTTCACTGCGAAACACCAGAAGCTTTCCTA  Raphanus raphanistrum subsp. landra
EY925322       --> GTCCAGCCAAAGACACTCAATTTCACTGCGAAACACCAGA..........  Raphanus raphanistrum subsp. landra
FD556168       --> GTCCAGCCAAg.......................................  Raphanus raphanistrum subsp. landra
FD948605       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX904640       --> GTCCAGCCAAAGACACTCAATTTCACTACGAAACACCAGAAGCTTTCCTA  Raphanus sativus cv Rat-Tail Radish #3870
EV547784       --> GTCCAGCCAAAGACACTCAATTTCACTGCGAAACACCAGAAGCTTTCCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD578188       --> GTCCAGCCAAAGACACTCAATTTCACTACGAAACACCAGAAGCTTTCCTA  Raphanus sativus cv Rat-Tail Radish #3870
EW731916       --> GTCCAGCCAAGGACACTCAATTTCACTACGAAACACCAGAAGCTTTCCTA  Raphanus sativus cv Rat-Tail Radish #3870
FD578397       --> GTCCAGCCAAAGACACTCAATTTCACTACGAAACACCAGAAGCTTTCCTA  Raphanus sativus cv Rat-Tail Radish #3870
EX888648       --> GTCCAGCCAAGGACACTCAATTTCACTACGAAACACCAGAAGCTTTCCTA  Raphanus sativus var. oleiformis

               751    -    801
UN20248        --> CAGTGTTACTTTCAGGACGAAGCTGCGGATGAAGAGGCCTGAGTTTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736310       <-- CAGTGTTACTTTCAGGACGAAGCTGCGGATGAAGAGGCCTGAGTTTGGTG
FD552516       <-- CGCTGTTACTTTCAGGACGAAGCTGCGGATGAAAAGGCCTGAGTTTGGTG
EV543594       <-- CAGTGTTACTTTCAGGACGAAGTTGCGGATGAAGAGGTCTGAGTTTGGTG
FD582374       <-- CAGTGTTACTTTCAGGACGAAGCTGCGGATGAAGAGGCCTGAGTTTGGTG
EX892548       <-- CAGTGTTACTTTCAGGACGAAGCTGCGGATGAAGAGGCCTGAGTTTGGTG
EY920825       <-- CGCTGTTACTTTCAGGACGAAGCTGCGGATGAAAAGGCCTGAGTTTGGTG
EY925322       --> ..................................................
FD556168       --> ..................................................
FD948605       --> ..................................................
EX904640       --> CAGTGTTACTTTCAG...................................
EV547784       --> CAGTGTTACTTTCAG-ACGAAGTTGCGGATGAAGAGGTCTGAGTTTGGTG
FD578188       --> CAGTGTTACTTTCAG-ACGAAGC...........................
EW731916       --> CAGTGTTACTTTCAGGACGAAGCTGCGGATGAAGAGGCCTGAGTTTGGTG
FD578397       --> CAGTGTTACTTTCAGGACGAAGCTGCGGATGAAGAGGCCTGAGTTTGGTG
EX888648       --> CAGTGTTACTTTCAGGACGAAGCTGCGGATGAAGAGGCCTGAGTTTGGTG

               801    -    851
UN20248        --> GTCTTTTATGGAAGAGTGCGACGCATAAGGTTCGTAGCCCGGTTATAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736310       <-- GTCTTTTATGGAAGAGTGCGACGCATGAGGTTCGTAGCCCGGTTATAATC
FD552516       <-- GTCTTTTATGGAAGAGTGCGACGCATAAGGTTCGTAGCCCGGTTATAATC
EV543594       <-- GTCTTTTATGGAAGAGTGCGACGCATAAGGTTCGTAGCCCGGTTATAATC
FD582374       <-- GTCTTTTATGGAAGAGTGCGACGCATAAGGTTCGTAGCCCGGTTATAATC
EX892548       <-- GTCTTTTATGGAAGAGTGCGACGCATAAGGTTCGTAGCCCGGTTATAATC
EY920825       <-- GTCTTTTATGGAAGAGTGCGACGCATAAGGTTCGTAGCCCGGTTATAATC
EY925322       --> ..................................................
FD556168       --> ..................................................
FD948605       --> ..................................................
EX904640       --> ..................................................
EV547784       --> GTCTTTTATGGAAGAGTGCGACGCA.........................
FD578188       --> ..................................................
EW731916       --> GTCTTTTATGGAAGAGTGCGACGCATGAGGTTCGTAGCCCGGTTATAATC
FD578397       --> GTCTTTTATGGAAGAGTGCGACGCATAAGGTTCGTAGCCCGGTTATAATC
EX888648       --> GTCTTTTATGGAAGAGTGCGACGCATAAGGTTCGTAGCCCGGTTATAATC

               851    -    901
UN20248        --> ACATGGTTGCCTCCTCTGTAGAGAGGA-CAAACCGTTATTGAAGAAACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736310       <-- ACATGGTTGCCTCCTCTGTAGAGAGGA-CAAACCGTTATTGAAGAAACTC
FD552516       <-- ACATGGTTCCCTCCTCTGTAGAGAGGA-CAAACCGTTATTGAAGAAACTC
EV543594       <-- ACATGGCTGCCTCCTCTGTAGAGAGGAACAAACCGTTATTGAAGAAACTC
FD582374       <-- ACATGGTTGCCTCCTCTGTAGAGAGGA-CAAACCGTTATTGAAGAAACTC
EX892548       <-- ACATGGTTGCCTCCTCTGTAGAGAGGA-CAAACCGTTATTGAAGAAACTC
EY920825       <-- ACATGGTTCCCTCCTCTGTAGAGAGGA-CAAACCGTTATTGAAGAAACTC
EY925322       --> ..................................................
FD556168       --> ..................................................
FD948605       --> ..................................................
EX904640       --> ..................................................
EV547784       --> ..................................................
FD578188       --> ..................................................
EW731916       --> ACATGGTTGCCTCCTCTGTAGAGAGGA-CAAACCGTTATTGAAGAAACTC
FD578397       --> ACATGGTTGCCTCCTCTGTAGAGAGGA-CAAACCGTTATTGAAGAAACTC
EX888648       --> ACATGGTTGCCTCCTCTGTAGAGAGGA-CAAACCGTTATTGAAGAAACTC

               901    -    951
UN20248        --> TAATGTTTTAGTTTCAACAAATAAGATTTCTTTATGTAAGGAGGGAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736310       <-- TAATGTTTTAGTTTCAACAAATAAGATTTCTTTATGTAAGGAGGGAGTGA
FD552516       <-- TAATGTTTTAGTTTCAACAAATAAGATTTCTTTATGTAAGGAGGGAGAGA
EV543594       <-- TAATGTTTTAGTTTCAACAAATAAGATTTCTTTATGTAAGGAGGGAGAGA
FD582374       <-- TAATGTTTTAGTTTCAACAAATAAGATTTCTTTATGTAAGGAGGGAGAGA
EX892548       <-- TAATGTTTTAGTTTCAACAAATAAGATTTCTTTATGTAAGGAGGGAGAGA
EY920825       <-- TAATGTTTTAGTTTCAACAA-TAAGATTTCTTTATGTAAGGAGGGAGAGA
EY925322       --> ..................................................
FD556168       --> ..................................................
FD948605       --> ..................................................
EX904640       --> ..................................................
EV547784       --> ..................................................
FD578188       --> ..................................................
EW731916       --> TAATGTTTTAGTTTCAACAAATAAGATTTCTTTAT...............
FD578397       --> TAATGTTTTAGTTTCAACAAATAAGATTTCTTTATGTAAGGAGGGAGAGA
EX888648       --> TAATGTTTTAGTTTCAACAAATAAGATTTCTTTATGTAAGGAGGGAGAGA

               951    -   1001
UN20248        --> TGAGCTCTTCTCTAGAAGCAATGCTTTAAAAAACATTTTCAGTAGTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736310       <-- TGAGCTCTTCTCTAGAAGCAATGCTTTAAAAAACATTTTCAGTAGTTTTT
FD552516       <-- TGAGCTCTTCTCTAGAAGCAATGCTTTAAAAAACATTTTCAGTAGTTTT-
EV543594       <-- TGAGCTCTTCTCTAGAAGCAATGCTTTCAAAAACATTTTCAGTAGTTTTT
FD582374       <-- TGAGCTCTTCTCTAGAAGCAACGCTTTAAAAAACATTTTCAGTAGTTTTT
EX892548       <-- TGAGCTCTTCTCTAGAAGCAATGCTTTAAAAAACATTTTCAGTAGTTTTT
EY920825       <-- TGAGCTCTTCTCTAGAAGCAATGCTTTAAAAAA.................
EY925322       --> ..................................................
FD556168       --> ..................................................
FD948605       --> ..................................................
EX904640       --> ..................................................
EV547784       --> ..................................................
FD578188       --> ..................................................
EW731916       --> ..................................................
FD578397       --> TGAGCTCTTCTCTAGAAGCAATGCTTTAAAAAA.................
EX888648       --> TGAGCTCTTCTCTAGAAGCAATGCTTTAAAAA-CATTTTCAGTAGTTTTT

               1001   -   1051
UN20248        --> AGTTCATGTTCTTGCAGAAGCTACCTTTTAAAATAAAATACCGTGTTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736310       <-- AGTTCATGTTCTTGCAGAAGCTACCTTTTAAAATAAAATACCGTGTTTTC
FD552516       <-- AGTTCATGTTCTTGCAGAAGCTACCTTTTTAAATAAAATACCGCGTTTTC
EV543594       <-- AGTTCATGTTCTTGCAGAAGCTACCTTTTAAAATAAAATACCGTGTTTTC
FD582374       <-- AGTTCATGTTCTTGCAGAAGCTACCTTTTAAAATAAAATACCGTGTTTTC
EX892548       <-- AGTTCATGTTCTTGCAGAAGCTACCTTTTAAAATAAAATACCGTGTTTTC
EY920825       <-- ..................................................
EY925322       --> ..................................................
FD556168       --> ..................................................
FD948605       --> ..................................................
EX904640       --> ..................................................
EV547784       --> ..................................................
FD578188       --> ..................................................
EW731916       --> ..................................................
FD578397       --> ..................................................
EX888648       --> AGTTCATGTTCTTGCAGAAGCTACCTTTTAAA-T-AAATACCGTGTTTca

               1051   -   1101
UN20248        --> ACC
                   ~~~
EW736310       <-- ACC
FD552516       <-- Atc
EV543594       <-- ACC
FD582374       <-- ACC
EX892548       <-- ACC
EY920825       <-- ...
EY925322       --> ...
FD556168       --> ...
FD948605       --> ...
EX904640       --> ...
EV547784       --> ...
FD578188       --> ...
EW731916       --> ...
FD578397       --> ...
EX888648       --> cc.