Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN20249

               1      -     51
UN20249        --> GGGGAGCTAGTAATAATAATAATAATAAAGATGGTTTAATTATAGTAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- ..................................................
FD561454       <-- ..................................................
EY922597       <-- ..................................................
EV549800       <-- ..................................................
EY925726       --> GGGGAGCTAGTAATAATAATAATAATAAAGATGGTTTAATTATAGTAATC
EX908285       --> ..................................................
EY918534       --> ..................................................
FD982633       --> ..................................................
EY927918       --> ..................................................
FD565617       --> ..................................................
EY926173       --> ..................................................
EV545196       --> ..................................................

               51     -    101
UN20249        --> AAATCATCCTTGTGCCAAATTCAACACACCAAAAAATCATTTATTCATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- .............GCCAAATTCAACACACCAAAAAATCATTTATTCATGG
FD561454       <-- ..................................................
EY922597       <-- ..................................................
EV549800       <-- ..................................................
EY925726       --> AAATCATCCTTGTGCCAAATTCAACACACCAAAAAATCATTTATTCATGG
EX908285       --> .............GCCAAATTCAACACACCAAAAAATCATTTATTCATGG
EY918534       --> ........................CACACCAAAAAATCATTTATTCATGG
FD982633       --> .........................gCACCAAAAAATCATTTATTCATGG
EY927918       --> ....................................TCATTTATTCATGG
FD565617       --> ....................................TCATTTATTCATGG
EY926173       --> ..................................................
EV545196       --> ..................................................

               101    -    151
UN20249        --> AGTCCTCTCAATGAATGTTACCAAATTGTCTGCTCGCTTTATTCTTCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- AGTCCTCTCAACGAATGTTACCAGATTGTCTGCTCGCTTTATTCTTCACA
FD561454       <-- ..................................................
EY922597       <-- ..................................................
EV549800       <-- ..................................................
EY925726       --> AGTCCTCTCAATGAATGTTACCAAATTGTCTGCTCGCTTTATTCTTCACA
EX908285       --> AGTCCTCTCAACGAATGTTACCAGATTGTCTGCTCGCTTTATTCTTCACA
EY918534       --> AGTCCTCTCAATGAATGTTACCAAATTGTCTGCTCGCTTTATTCTTCACA
FD982633       --> AGTCCTCTCAATGAATGTTACCAAATTGTCTGCCCGCTTTATTCTTCACA
EY927918       --> AGTCCTCTCAATGAATGTTACCAAATTGTCTGCTCGCTTTATTCTTCACA
FD565617       --> AGTCCTCTCAATGAATGTTACCAAATTGTCTGCTCGCTTTATTCTTCACA
EY926173       --> ........................ATTGTCTGCTCGCTTTATTCTTCACA
EV545196       --> ............................TCTGCTCGCTTTATTCTTCACA

               151    -    201
UN20249        --> AGAAGCACAATCTTGTTTCAGTTTTTGTTTTTTTTTT-CAAAACACTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- AGAAGCACAATCTTGTTTCAGTTTTTGTTCTTTTTTT-CAAAACACTCCT
FD561454       <-- ..................................................
EY922597       <-- ..................................................
EV549800       <-- ..................................................
EY925726       --> AGAAGCACAATCTTGTTTCAGTTTTTGTTTTTTTTTTTCAAAACACTCCT
EX908285       --> AGAAGCACAATCTTGTTTCAGTTTTTGTTCTTTTTTT-CAAAACACTCCT
EY918534       --> AGAAGCACAATCTTGTTTCAGTTTTTGTTTTTTTTTT-CAAAACACTCCT
FD982633       --> AGAAGCACAATCTTGTTTCAGTTTTTGTTTTTTTTTT-CAAAACACTCCT
EY927918       --> AGAAGCACAATCTTGTTTCAGTTTTTGTTTTTTTTTT-CAAAACACTCCT
FD565617       --> AGAAGCACAATCTTGTTTCAGTTTTTGTTTTTTTTT--CAAAACACTCCT
EY926173       --> AGAACCACAATCTTGTTTCAGTTTTTGATTTTTGTTT-CAAAACACTCCT
EV545196       --> AGAACCACAATCTTGTTTCAGTTTTTGTTTTTTCTTT-CAAA-CACTCCT

               201    -    251
UN20249        --> CCCTCTGTAATAAACATAGATGCCAAAACTCTCATGCACATGTTTAAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- CCCTCTGTAATAAACATAGATGCCAAAACTCTCATGCACATGTTTAAATG
FD561454       <-- .................................ATGCACATGTTTAAATG
EY922597       <-- ..................................................
EV549800       <-- ..................................................
EY925726       --> CCCTCTGTAATAAACATAGATGCCAAAACTCTCATGCACATGTTGAAATG
EX908285       --> CCCTCTGTAATAAACATAGATGCCAAAACTCTCATGCACATGTTTAAATG
EY918534       --> CCCTCT--AATAAACATAAATGCCAAAACTCTCATGCACATGTTGAAATG
FD982633       --> CCCTCT--AATAAACATAGATGCCAAAACTCTCATGCACATGTTGAAATG
EY927918       --> CCCTCTGTAATAAACATAGATGCCAAAACTCTCATGCACATGTTTAAATG
FD565617       --> CCCTCTGTAATAAACATAGATGCCAAAACTCTCATGCACATGTTTAAATG
EY926173       --> CCCTCTGTAATAAACATAGATGCCAAAACTCTCATGCACATGTTTAAATG
EV545196       --> CCCTCTGTAATAAACATAGATGCCAAAACTCTCATGCACATGTTTAAATG

               251    -    301
UN20249        --> GTTACATTCATGGAGAGAGAAAAATGAGATA-CTT-CACACATCGGCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- GTTACATTCATGGAGAGAGAAAAATGAGATAACTT-CACACATCGGCAAG
FD561454       <-- GT-ACATTCATGGAGAGAGAAAAATGAGATA-CTT-CACACATCGGCAAG
EY922597       <-- ..................................................
EV549800       <-- ..................................................
EY925726       --> GTTACATTCATGGAGAGAGAAAAATGAGATA-CTTTCACACATCGGCAAG
EX908285       --> GTTACATTCATGGAGAGAGAAAAATGAGATAACTT-CACACATCGGCAAG
EY918534       --> GTTACATTCATGGAGAGAGAAAAATGAAATA-CTTTCACACATCGGCAAG
FD982633       --> GTTACATTCATGGAGAGAGAAAAATGAGATA-CTTTCACACATCGGCAAG
EY927918       --> GTTACATTCATGGAGAGAGAAAAATGAGATA-CTT-CACACATCGGCAAG
FD565617       --> GTTACATTCATGGAAAGAGAAAAATGAAATA-CTT-CACACATCGGCAAG
EY926173       --> GTTACATTCATGGAGAGAGAAAAATGAGATAACTT-CACACATCGGCAAG
EV545196       --> GTTACATTCATGGAGAGAGAAAAATGAGATA-CTT-CACACGTCGGCAAG

               301    -    351
UN20249        --> TGCAATAAGCTGATCAACAACACTAGGATCTGCGAGTGTGCTAATATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- TGCAATAAGCTGATCAACAACACTAGGATCTGCGAGTGTGCTAATATCTC
FD561454       <-- TGCAATAAGCTGATCAACAACACTAGGATCTGCGAGTGTGCTAATATCTC
EY922597       <-- ............................................TATCTC
EV549800       <-- ..................................................
EY925726       --> TGCAATAAGCTGATCAACAACACTAGGATCTGCGAGTGTGCTAATGTCTC
EX908285       --> TGCAATAAGCTGATCAACAACACTAGGATCTGCGAGTGTGCTAATATCTC
EY918534       --> TGCGATAAGCTGATCAACAACACTAGGATCTGCGAGTGTGCTAATATCTC
FD982633       --> TGCAATAAGCTGATCAACAACACTAGGATCTGCGAGTGTGCTAATATCTC
EY927918       --> TGCAATAAGCTGATCAA--ACACTAGGATCTGCGAGTGTGCTAATATCTC
FD565617       --> TGCAATAAGCTGATCAACAACACTAGGATCTGCGAGTGTGCTAATATCTC
EY926173       --> TGCAATAAGCTGATCAACAACACTAGGATCTGCGAGTGTGCTAATATCTC
EV545196       --> TGCAATAAGCTGATCAACAACACTAGGATCTGCGAGGGTGCTAATATCTC

               351    -    401
UN20249        --> CAAGCTCTTCTAATTGCCTTGAAGCGATCTTTCTCAGGATTCTCCTCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- CAAGCTCTTCTAATTGCCTTGAAGCGATCTTTCTCAGGATTCTCCTCATT
FD561454       <-- CAAGCTCTTCTAATTGCCTTGAAGCGATCTTTCTCAGGATTCTCCTCATT
EY922597       <-- CAAGCTCTTCTAATTGC-TTGAAGCGATCTTTCTCAGGATTCTCCTCATT
EV549800       <-- ..................................................
EY925726       --> CAAGCTCTTCTAATTGCCTTGAGGCGATCTTTCTCAGGATTCTCCTCATT
EX908285       --> CAAGCTCTTCTAATTGCCTTGAAGCGATCTTTCTCAGGATTCTCCTCATT
EY918534       --> CAAGCTCTTCTAATTGCCTTGAAGCGATCTTTCTCAGGATTCTCCTCATT
FD982633       --> CAAGCTCTTCTAATTGCCTTGAAGCGATCTTTCTCAGGATTCTCCTCATT
EY927918       --> CAAGCTCTTCTAATTGCCTTGAAGCGATCTTTCTCAGGATTCTCCTCATT
FD565617       --> CAAGCTCTTCTAATTGCCTTGAAGCGATCTTTCTCAGGATTCTCCTCATT
EY926173       --> CAAGCTCTTCTAATTGCCTTGAAGCGATCTTTCTCAGGATTCTCCTCATT
EV545196       --> CAAGCTCTTCTAATTGCCTTGAAGCGATCTTTCTCAGGATTCTCCTCATT

               401    -    451
UN20249        --> ATCTTTCCACTTCTTGTCTTTGGCAACCCTGGTGCCCAATGTATTCTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- ATCTTTCCACTTCTTGTCTTTGGCAACCCTGGTGCCCAATGTACTCTGTC
FD561454       <-- ATCTTTCCACTTCTTGTCTTTGGCAACCCTGGTGCCCAATGTATTCTGTC
EY922597       <-- ATCTTTCCACTTCTCGTCTTTGGCAACCCTGGTGCCCAATGTATTCTGTC
EV549800       <-- ..................................................
EY925726       --> ATCTTTCCACTTCTTGTCTTTGGCAACCCTGGTGCCCAATGTATTCTGTC
EX908285       --> ATCTTTCCACTTCTTGTCTTTGGCAACCCTGGTGCCCAATGTACTCTGTC
EY918534       --> ATCTTTCCACTTCTCGTCTTTGGCAACCCTGGTGCCCAATGTATTCTGTC
FD982633       --> ATCTTTCCACTTCTCGTCTTTGGCAACCCTGGTGCCCAATGTATTCTGTC
EY927918       --> ATCTTTCCACTTCTTGTCTTTGGCAACCCTGGTGCCCAATGTATTCTGTC
FD565617       --> ATCTTTCCACTTCTTGTCTTTGGCAACCCTGGTGCCCAATGTATTCTGTC
EY926173       --> ATCTTTCCACTTCTTGTCTTTGGCAACCCTGGTGCCCAATGTATTCTGTC
EV545196       --> ATCTTTCCACTTCTTGTCTTTGGCAACCCTGGTGCCCAATGTATTCTGTC

               451    -    501
UN20249        --> CGGTGCTGCAAATGCCCCAATCTGGTTTCGAACCATGATTATAAGGCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- CGGTGCTGCAAACGCCCCAATCTGGTTTCGAACCATGATTATAAGGCTTT
FD561454       <-- CGGTGCTGCAAATGCCCCAATCTGGTTTCGAACCATGATTATAAGGCTTT
EY922597       <-- CGGTGCTGCAAATGCCCCAATCTGGTTTCGAACCATGATTATAAGACTTT
EV549800       <-- ..................................................
EY925726       --> CGGTGCTGCAAATGCCCCAATCTGGTTTCGAACCATGATTATAAGGCTTT
EX908285       --> CGGTGCTGCAAACGCCCCAATCTGGTTTCGAACCATGATTATAAGGCTTT
EY918534       --> CGGTGCTGCAAATGCCCCAATCTGGTTTCGAACCATGATTATAAAACTTT
FD982633       --> CGGTGCTGCAAATGCCCCAATCTGGTTTCGAACCATGATTATAAGACTTT
EY927918       --> CGGTGCTGCAAATGCCCCAATCTGGTTTCGAACCATGATTATAAGGCTTT
FD565617       --> CGGTGCTGCAAATGCCCCAATCTGGTTTCGAACCATGATTATAAGGCTTT
EY926173       --> CGGTGCTGCAAACGCCCCAATCTGGTTTCGAACCATGATTATAAGGCTTT
EV545196       --> CGGTGCTGCAAATGCCCCAATCTGGTTTCGAACCATGATTATAAGGCTTT

               501    -    551
UN20249        --> TCCGAAGCTCTTCGCTGTAAGGAACACCCTCCACAAGAGTGACAAACGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- TCCGAAGCTCTTCGCTGTAAGGAACACCCTCCACAAGAGTGACAAACGCA
FD561454       <-- TCCGAAGCTCTTCGCTGTAAGGAACACCCTCCACAAGAGTGACAAACGCA
EY922597       <-- TCCGAAGCTCTTCGCTGTAAGGAACACCCTCCACAAGAGTGACAAACGCA
EV549800       <-- ..................................................
EY925726       --> TCCGAAGCTCTTCGCTGTAAGGAACACCCTCCACAAGAGTGACAAACGCA
EX908285       --> TCCGAAGCTCTTCGCTGTAAGGAACACCCTCCACAAGAGTGACAAACGCA
EY918534       --> TCCGAAGCTCTTCGCTGTAAGGAACACCCTCCACAAGAGTGACAAACGCA
FD982633       --> TCCGAAGCTCTTCGCTGTAAGGAACACCCTCCACAAGAGTGACAAACGCA
EY927918       --> TCCGAAGCTCTTCGCTGTAAGGAACACCCTCCACAAGAGTGACAAACGCA
FD565617       --> TCCGAAGCTCTTCGCTGTAAGGAACACCCTCCACAAGAGTGACAAACGCA
EY926173       --> TCCGAAGCTCTTCGCTGTAAGGAACACCCTCCACAAGAGTGACAAACGCA
EV545196       --> TCCGAAGCTCTTCGCTGTAAGGAACACCCTCCACAAGAGTGACAAACGCA

               551    -    601
UN20249        --> TAGATACCCTGACCTTTCACCTCATGTTCTACACCTACAACAGCTGCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- TAGATACCCTGTCCTTTCACCTCATGTTCTACACCTACAACAGCTGCCTC  Raphanus sativus cv Rat-Tail Radish #3870
FD561454       <-- TAGATACCCTGACCTTTCACCTCATGTTCTACACCTACAACAGCTGCCTC  Raphanus sativus var. oleiformis
EY922597       <-- TAGATACCTTGTCCTTTCACCTCATGTTCTACACCTACAACAGCTGCCTC  Raphanus raphanistrum subsp. landra
EV549800       <-- ..................ACCTCATGTTCTACACATACAACAGCTGCCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY925726       --> TAGATACCCTGACCTTTCACCTCATGTTCTACACCTACAACAGCTGCCTC  Raphanus sativus var. oleiformis
EX908285       --> TAGATACCCTGTCCTTTCACCTCATGTTCTACACCTACAACAGCTGCCTC  Raphanus sativus cv Rat-Tail Radish #3870
EY918534       --> TAAATACCTTGTCCTTTCACCTCATGTTCTACACCTACAACAGCTGCCTC  Raphanus raphanistrum subsp. landra
FD982633       --> TAGATACCTTGTCCTTTCACCTCATGTTCTACACCTACAACAGCTGCCTC  Raphanus raphanistrum subsp. landra
EY927918       --> TAGATACCCTGACCTTTCACCTCATGTTCTACACCTACAACAGCTGCCTC  Raphanus sativus var. oleiformis
FD565617       --> TAGATACCCTGACCTTTCACCTCATGTTCTACACCTACAACAGCTGCCTC  Raphanus sativus var. oleiformis
EY926173       --> TAGATACCCTGACCTTTCACCTC...........................  Raphanus sativus var. oleiformis
EV545196       --> TAGATACCCTGACCTTTCACCTCATGTTCTACACCTACAACAGCTGCCTC  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN20249        --> TGCACATTGGGGATGTGAAGCCAGAGCAGATTCCACTTCAGCAGTTCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- TGCACATTGGGGATGTGAAGCTAGAGCAGACTCCACTTCAGCAGTTCCAA
FD561454       <-- TGCACATTGGGGATGTGAAGCCAGAGCAGATTCCACTTCAGCAGTTCCAA
EY922597       <-- TGCACATTGGGGATGCGAAGCCAGAGCAGATTCCACTTCAGCAGTTCCAA
EV549800       <-- TGCACATTGGGGATGTGAAGCCAGAGCAGATTCCACTTCAGCAGTTCCAA
EY925726       --> TGCACATTGGGGATGTGAAGCCAG..........................
EX908285       --> TGCACATTGGGGATGTGAAGCTAGAGCAGACTCCACTTCAGCAGTTCCAA
EY918534       --> TGCACATTGGGGATGCGAAGCCAGAGCAGATTCCACTTCAGCAGTTCCAA
FD982633       --> TGCACATTGGGGATGCGAAGCCAGAGCAGATTCCACTTCAGCAGTTCAAA
EY927918       --> TGCACATTGGGGATGTGATGCCAGAGCAGATTCCACTTCAGCAGTTCCAA
FD565617       --> TGCACATTGGGGATGTGAAGCCAGAGCAAATTCCACTTCAGCAGTTCCAA
EY926173       --> ..................................................
EV545196       --> TGCACATTGGGGATGTGAAGCCAGAGCAGATTCCACTTCAGCAGTTCCAA

               651    -    701
UN20249        --> TGCGGTGGCCACTGACGTTGATAACATCATCAACCCTTCCTGTAAGCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- TGCGGTGGCCACTGACGTTGATAACATCATCAACCCTc............  Raphanus sativus cv Rat-Tail Radish #3870
FD561454       <-- TGCGGTGGCCACTGACATTGATAACATCATCAACCCTTCCTGTAAGCCAG  Raphanus sativus var. oleiformis
EY922597       <-- TGCGGTGGCCACTGACGTTGATAACATCATCAACCCTTCCTGTAAGCCAG  Raphanus raphanistrum subsp. landra
EV549800       <-- TGCGGTGGCCACTGACATTGATAACATCATCAACCCTTCCTGTAAGCCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY925726       --> ..................................................  Raphanus sativus var. oleiformis
EX908285       --> TGCGGTGGCCACTGACGTTGATAACATCATCAACCCTc............  Raphanus sativus cv Rat-Tail Radish #3870
EY918534       --> TGCGGTGGCCACTGACGTTGATAACATCATCAACCCTTCCTGTAAGCCAG  Raphanus raphanistrum subsp. landra
FD982633       --> TGCGGTGGCCACTGACGTTGATAACATCATCAACCCTTCCTGTAAGCCAG  Raphanus raphanistrum subsp. landra
EY927918       --> TGCGGTGGCCACTGACATTGATAACATCATCAACCCTTCCTGTAAGCCAG  Raphanus sativus var. oleiformis
FD565617       --> TGCGGTGGCCACTGACATTGATAACATCATCAACCCTTCCTGTAAGCCA.  Raphanus sativus var. oleiformis
EY926173       --> ..................................................  Raphanus sativus var. oleiformis
EV545196       --> TGCGGTGGCCACTGACATTGATAACATCATCAACCCTTCCTGTAAGCCAG  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN20249        --> TAGTAACCATCCTTGTCTCTGCTGCAACCATCACCACTAAAATAGTATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- ..................................................
FD561454       <-- TAGTAACCATCCTTGTCTCTGCTGCAACCATCACCACTAAAATAGTATCC
EY922597       <-- TAGTAACCATCCTTGTCTCTGCTGCAACCATCACCACTAAAATAGTATCC
EV549800       <-- TAGTAACCATCCTTGTCTCTGCTGCAACCATCACCACTAAAATAGTATCC
EY925726       --> ..................................................
EX908285       --> ..................................................
EY918534       --> TAGTAACCATCCTTGTCTCTGCTGCAACCATCACCACTAAAATAGTATCC
FD982633       --> TAGTAACCATCCTTGTCTCTGCTGCAACCATCACCACTAAAATAGTATCC
EY927918       --> TAGTAACCATCCTTGTCTCTGCTGCAACCATCACCACTAAAATAGTATCC
FD565617       --> ..................................................
EY926173       --> ..................................................
EV545196       --> TAGTAACCATCCTTGTCTCTGCTGCAACCATCACCACTAAAATAGTATCC

               751    -    801
UN20249        --> AGCAAAAGGTTTGAAGTATGTGGTTTCATATCTTTCATGATCCCCAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD561454       <-- AGCAAAAGGTTTGAAGTATGTGGTTTCATATCTTTCATGATCCCCAAACA  Raphanus sativus var. oleiformis
EY922597       <-- AGCAAAAGGTTTGAAATATGTGGTTTCATATCTTTCATGATCCCCAAACA  Raphanus raphanistrum subsp. landra
EV549800       <-- AGCAAAAGGTTTGAAGTATGTGGTTTCATATCTTTCATGATCCCCAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY925726       --> ..................................................  Raphanus sativus var. oleiformis
EX908285       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY918534       --> AGCAAAAGGTTTGAAATATGTGGTTTCATATCTTTCATGATCCCCAAACA  Raphanus raphanistrum subsp. landra
FD982633       --> AGCAAAAGGTTTGAAATATGTGGTTTCATATCTTTCATGATCCCCAAACA  Raphanus raphanistrum subsp. landra
EY927918       --> AGCAAAAGGTTTGAAGTATGTGGTTTCATATCTTTCATGATCCCCAAACA  Raphanus sativus var. oleiformis
FD565617       --> ..................................................  Raphanus sativus var. oleiformis
EY926173       --> ..................................................  Raphanus sativus var. oleiformis
EV545196       --> AGCAAAAGGTTTGAAGTATGTGGTTTCATATCTTTCATGATCCCCAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN20249        --> AAGTTCGAAACGCCCCGGGCCATGATCCTTTCACACAAAGATAACCACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- ..................................................
FD561454       <-- AAGTTCGAAACGCCCCGGGCCATGATCCTTTCACACAAAGATAACCACTA
EY922597       <-- AAGTTCGAAACGCCCCGGGCCATGATCCTTTCACACAAAGATAACCACTA
EV549800       <-- AAGTTCGAAACGCCCCGGGCCATGATCCTTTCACACAAAGATAACCACTA
EY925726       --> ..................................................
EX908285       --> ..................................................
EY918534       --> AAGTTCGAAACGCCCCGGGCCATGATCCTTTCACACAAAGATAACCACTA
FD982633       --> AAGTTCGAAACGCCCCGGGCCATGATCCTTTCACACAAAGATAACCACTA
EY927918       --> AAGTTCGAAACGCCCCGGGCCATGATCCTTTCACACAAAGATAACCACTA
FD565617       --> ..................................................
EY926173       --> ..................................................
EV545196       --> AAGTTCGAAACGCCCCGGGCCATGATCCTTTCACACAAAGATAACCACTA

               851    -    901
UN20249        --> CACTCGCCTTCGATTTCATCTCCTTTTTCATCAACTATGACAGGCTGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- ..................................................
FD561454       <-- CACTCGCCTTCGATTTCATTGCCTTTTTCATCAACTATGACAGGCTGAAC
EY922597       <-- CACTCGCCTTCGATTTCATCGCCTTTTTCATCAACTATGACAGGCTGAAC
EV549800       <-- CACTCGCCTTCGATTTCATCTCCTTTTTCATCAACTATGACAGGCTGAAC
EY925726       --> ..................................................
EX908285       --> ..................................................
EY918534       --> CAC...............................................
FD982633       --> CACTC.............................................
EY927918       --> CACTCG............................................
FD565617       --> ..................................................
EY926173       --> ..................................................
EV545196       --> CACTCGCCTTCGATTTCATCTCCTTTTTCATCAACTATG...........

               901    -    951
UN20249        --> ACCAAAGAAAGGGAAAGTAGCTGAACCAGGCTTCTGCGGCCAAGCACCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- ..................................................
FD561454       <-- ACCAAAGAAAGGGAAAGTAGCTGGACCAGGCTTCTGCGGCCAAGCACCTG
EY922597       <-- ACCAAAGAAAGGGAAAGTAGTTGAACCAGGCTTCTGTGGCCAAGCACCTG
EV549800       <-- ACCAAAGAAAGGGAAAGTAGCTGAACCAGGCTTCTGCGGCCAAGCACCTG
EY925726       --> ..................................................
EX908285       --> ..................................................
EY918534       --> ..................................................
FD982633       --> ..................................................
EY927918       --> ..................................................
FD565617       --> ..................................................
EY926173       --> ..................................................
EV545196       --> ..................................................

               951    -   1001
UN20249        --> GCAACGGCGTTATCATGAAGCCACCAGTTTCAGTTTGCCACCATGTATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- ..................................................
FD561454       <-- GCAACGGGGTTATCATGAAGCCGCCAGTTTCAGTTTGCCACCACGTATCG
EY922597       <-- GCAACGGCGTTATCATGAAGCCACCAGTTTCAGTTTGCCACCATGT-TCT
EV549800       <-- GCAACGGCGTTATCATGAAGCCACCAGTTTCAGTTTGCCACCATGTATCG
EY925726       --> ..................................................
EX908285       --> ..................................................
EY918534       --> ..................................................
FD982633       --> ..................................................
EY927918       --> ..................................................
FD565617       --> ..................................................
EY926173       --> ..................................................
EV545196       --> ..................................................

               1001   -   1051
UN20249        --> GAAATGGGACACCTTGAATCACCAACTAGATTGAAGAACCATCTCCATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- ..................................................
FD561454       <-- GAAATGGGACACCTTGAATCACCAc.........................
EY922597       <-- GAAATGGGACACCTTGAATCACCAACTAGATTGAAGAACCATCTCCATGC
EV549800       <-- GAAATGGGACACCTTGAATCACCAACTAGATTGAAGAACCATCTCCATGC
EY925726       --> ..................................................
EX908285       --> ..................................................
EY918534       --> ..................................................
FD982633       --> ..................................................
EY927918       --> ..................................................
FD565617       --> ..................................................
EY926173       --> ..................................................
EV545196       --> ..................................................

               1051   -   1101
UN20249        --> ACTCGGATTGATGGGCTCACCCACACTTCCAAGTACTCGTAGCGATTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- ..................................................
FD561454       <-- ..................................................
EY922597       <-- ACTCGGATc.........................................
EV549800       <-- ACTCGGATTGATGGGCTCACCCACACTTCCAAGTACTCGTAGCGATTTGC
EY925726       --> ..................................................
EX908285       --> ..................................................
EY918534       --> ..................................................
FD982633       --> ..................................................
EY927918       --> ..................................................
FD565617       --> ..................................................
EY926173       --> ..................................................
EV545196       --> ..................................................

               1101   -   1151
UN20249        --> GAGAATGATTTGTCACAAACTTATCATCATAACGCATGAGAGACCTCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- ..................................................
FD561454       <-- ..................................................
EY922597       <-- ..................................................
EV549800       <-- GAGAATGATTTGTCACAAACTTATCATCATAACGCATGAGAGACCTCACC
EY925726       --> ..................................................
EX908285       --> ..................................................
EY918534       --> ..................................................
FD982633       --> ..................................................
EY927918       --> ..................................................
FD565617       --> ..................................................
EY926173       --> ..................................................
EV545196       --> ..................................................

               1151   -   1201
UN20249        --> AATGTTGGAGCAGTGTAGAATATCGAAATCTTGTATTTGTCAACAATTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX904364       <-- ..................................................
FD561454       <-- ..................................................
EY922597       <-- ..................................................
EV549800       <-- AATGTTGGAGCAGTGTAGAATATCGAAATCTTGTATTTGTCAACAATTTC
EY925726       --> ..................................................
EX908285       --> ..................................................
EY918534       --> ..................................................
FD982633       --> ..................................................
EY927918       --> ..................................................
FD565617       --> ..................................................
EY926173       --> ..................................................
EV545196       --> ..................................................

               1201   -   1251
UN20249        --> CCAACAGCGTCCC
                   ~~~~~~~~~~~~~
EX904364       <-- .............
FD561454       <-- .............
EY922597       <-- .............
EV549800       <-- CCAACAGCGTCCC
EY925726       --> .............
EX908285       --> .............
EY918534       --> .............
FD982633       --> .............
EY927918       --> .............
FD565617       --> .............
EY926173       --> .............
EV545196       --> .............