RadishBase

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Alignment for radish unigene UN20291

               1      -     51
UN20291        --> GGACGACAGAGAATTCTCATTCATTACCAAAAGAAATGGGTGATGACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- ..................................................
EW721900       <-- ..................................................
EW727929       <-- ..................................................
EV571809       <-- ..................................................
EX893039       <-- ..................................................
EX775660       <-- ..................................................
EY910058       <-- ..................................................
FD552546       <-- ..................................................
EW730729       <-- ..................................................
EX775312       <-- ..................................................
EY915245       --> GGACGACAGAGAATTCTCATTCATTACCAAAAGAAATGGGTGATGACAAG
EX771402       --> .....ggAGAGAATTCTCATTCATTACCAAAAGAAATGGGTGATGACAAG
EY913911       --> .....ggAGAGAATTCTCATTCATTACCAAAAGAAATGGGTGATGACAAG
EY938912       --> ....gggAGAGAATTCTCATTCATTACCGAAAGAAATGGGTGATGACAAG
FD969922       --> .....ggAGAGATTTCTCATTCATTACCAAAAGAAATGGGTGATGACAAG
FD971387       --> .....ggAGAGATTTCTCATTCATTACCAAAAGAAATGGGTGATGACAAG
EW718222       --> ........ggGAATTCTCATTCATTACCAAAAGAAATGGGTGATGACAAG
EX771233       --> .........gGAATTCTCATTCATTACCAAAAGAAATGGGTGATGACAAG
FD973683       --> ........gggattcCTCATTCATTACCAAAAGAAATGGGTGATGACAAG
FD980195       --> .............................................ACAAG
EY906066       --> ..............................................gAAG
FD938662       --> ..................................................
EW715503       --> ..................................................
FD556202       --> ..................................................
EW725341       --> ..................................................

               51     -    101
UN20291        --> GATTCGGACAGTGGTATCATCAAGGGAAATGGGACAGAGTCTGGTCGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- ..................................................
EW721900       <-- ..................................................
EW727929       <-- ..................................................
EV571809       <-- ..................................................
EX893039       <-- ..................................................
EX775660       <-- ..................................................
EY910058       <-- ..................................................
FD552546       <-- ..................................................
EW730729       <-- ..................................................
EX775312       <-- ..................................................
EY915245       --> GATTCGGACAGTGGTATCATCAAGGGAAATGGGACAGAGTCTGGTCGGAT
EX771402       --> GATTCGGACAGTAGTATCATCAAGGGAAATGGGACAGAGTCTGGTCGGAT
EY913911       --> GATTCGGACAGTGGTATCATCAAGGGAAATGGGACAGAGTCTGGTCGGAT
EY938912       --> GATTCGGACAGTGGTATCATCAGGGGAAATGGGACAGAGTCTGGTCGGAT
FD969922       --> GATTCGGACAGTGGTATCATCAAGGGAAATGGGACAGAGTCTGGTCGGAT
FD971387       --> GATTCGGACAGTGGTATCATCAAGGGAAATGGGACAGAGTCTGGTCGGAT
EW718222       --> GATTCGGACAGTGGTATCATCAGGGGAAATGGGACAGAGTCTGGTCGGAT
EX771233       --> GATTCGGACAGTAGTATCATCAAGGGAAATGGGACAGAGTCTGGTCGGAT
FD973683       --> GATTCGGACAGTGGTATCATCAAGGGAAATGGGACAGAGTCTGGTCGGAT
FD980195       --> GATTCGGACAGTGGTATCATCAGGGGAAATGGGACAGAGTCTGGTCGGAT
EY906066       --> GATTCGGACAGTGGTATCATCAAGGGAAATGGGACAGAGTCTGGTCGGAT
FD938662       --> .............................gGGGACAGAGTCTGGTCGGAT
EW715503       --> ..................................................
FD556202       --> ..................................................
EW725341       --> ..................................................

               101    -    151
UN20291        --> TATTACAACCACAAAGAAGGGTCTGAATGATCAGATAGACAAGACAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW721900       <-- ..................................................  Raphanus sativus var. oleiformis
EW727929       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV571809       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX893039       <-- ..................................................  Raphanus sativus var. oleiformis
EX775660       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY910058       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552546       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW730729       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX775312       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY915245       --> TATTACAACCACAAAGAAGGGTCTGAATGATCAGATAGACAAGACAATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX771402       --> TATTACAACCACAAAGAAGGGTCTGAACGATCAGATAGACAAGACAATCT  Raphanus raphanistrum subsp. landra
EY913911       --> TATTACAACCACAAAGAAGGGTCTGAATGATCAGATAGACAAGACAATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938912       --> TATTACAACCACAAAGAAGGGTCTGAATGATCAGATAGACAAGACAATCT  Raphanus sativus cv Early Scarlet Globe
FD969922       --> TATTACAACCACAAAGAAGGGTCTGAATGATCAGATAGACAAGACAATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971387       --> TATTACAACCACAAAGAAGGGTCTGAATGATCAGATAGACAAGACAATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW718222       --> TATTACAACCACAAAGAAGGGTCTGAACGATCAGATAGACAAGACAATCT  Raphanus sativus var. oleiformis
EX771233       --> TATTACAACCACAAAGAAGGGTCTGAACGATCAGATAGACAAGACAATCT  Raphanus raphanistrum subsp. landra
FD973683       --> TATTACAACCACAAAGAAGGGTCTGAATGATCAGATAGACAAGACAATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980195       --> TATTACAACCACGAAGAAGGGTCTGAATGATCAGATAGACAAGACAATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906066       --> TATTACAACCACAAAGAAGGGTCTGAATGATCAGATAGACAAGACAATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938662       --> TATTACAACCACAAAGAAGGGTCTGAACGATCAGATAGACAAGACAATCT  Raphanus sativus var. oleiformis
EW715503       --> ..................................................  Raphanus sativus var. oleiformis
FD556202       --> ..................................................  Raphanus raphanistrum subsp. landra
EW725341       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               151    -    201
UN20291        --> CGTACAAAGCTGAACATGTAATTGGCACTGGCTCATTCGGTGTTGTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- ..................................................
EW721900       <-- ..................................................
EW727929       <-- ..................................................
EV571809       <-- ..................................................
EX893039       <-- ..................................................
EX775660       <-- ..................................................
EY910058       <-- ..................................................
FD552546       <-- ..................................................
EW730729       <-- ..................................................
EX775312       <-- ..................................................
EY915245       --> CGTACAAAGCTGAACATGTAATTGGCACTGGCTCATTCGGTGTTGTCTTT
EX771402       --> CGTACAAAGCTGAACATGTAATTGGCACTGGCTCATTCGGTGTTGTCTTT
EY913911       --> CGTACAAAGCTGAACATGTAATTGGCCCTGGCTCATTCGGTGTTGTCTTT
EY938912       --> CGTACAGAGCTGAACATGTAATTGGCACTGGCTCATTCGGTGTTGTCTTT
FD969922       --> CGTACAAAGCTGAACATGTAATTGGCACTGGCTCATTCGGTGTTGTCTTT
FD971387       --> CGTACAGAGCTGAACATGTAATTGGCACTGGCTCATTCGGTGTTGTATTT
EW718222       --> CGTACAAAGCTGAACATGTAATTGGCACTGGCTCATTCGGTGTTGTCTTT
EX771233       --> CGTACAAAGCTGAACATGTAATTGGCACTGGCTCACTCGGTGTTGTCTTT
FD973683       --> CGTACAGAGCTGAACATGTAATTGGCACTGGCTCATTCGGTGTTGTATTT
FD980195       --> CGTACAGAGCTGAACATGTAATTGGCACTGGCTCATTCGGTGTTGTCTTT
EY906066       --> CGTACAAAGCTGAACATGTAATTGGCACTGGCTCATTCGGTGTTGTCTTT
FD938662       --> CGTACAAAGCTGAACATGTAATTGGCACTGGCTCATTCGGTGTTGTCTTT
EW715503       --> ..................................................
FD556202       --> ..................................................
EW725341       --> ..................................................

               201    -    251
UN20291        --> CAGGCTAAGTGCTTAGAGACAGAAGAAAAAGTAGCAATCAAGAAAGTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- ..................................................
EW721900       <-- ..................................................
EW727929       <-- ..................................................
EV571809       <-- ..................................................
EX893039       <-- ..................................................
EX775660       <-- ..................................................
EY910058       <-- ..................................................
FD552546       <-- ..................................................
EW730729       <-- ..................................................
EX775312       <-- ..................................................
EY915245       --> CAGGCTAAGTGCTTAGAGACGGAAGAAAAAGTAGCAATCAAGAAAGTGTT
EX771402       --> CAGGCTAAGTGCTTAGAGACAGAAGAAAAAGTAGCAATCAAGAAAGTGTT
EY913911       --> CAGGCTAAGTGCTTAGAGACGGAAGAAAAAGTAGCAATCAAGAAAGTGTT
EY938912       --> CAGGCTAAGTGCTTAGAGACAGAAGAAAAAGTAGCAATCAAGAAAGTGTT
FD969922       --> CAGGCTAAGTGCTTAGAGACGGAAGAAAAAGTAGCAATCAAGAAAGTGTT
FD971387       --> CAGGCTAAGTGCTTAGAGACAGAAGAAAAAGTAGCAATCAAGAAAGTGTT
EW718222       --> CAGGCTAAGTGCTTAGAGACAGAAGAAAAAGTAGCAATCAAGAAAGTGTT
EX771233       --> CAGGCTAAGTGCTTAGAGACAGAAGAAAAAGTAGCAATCAAGAAAGTGTT
FD973683       --> CAGGCTAAGTGCTTAGAGACAGAAGAAAAAGTAGCAATCAAGAAAGTGTT
FD980195       --> CAGGCTAAGTGCTTAGAGACAGAAGAAAAAGTAGCAATCAAGAAAGTGTT
EY906066       --> CAGGCTAAGTGCTTAGAGACGGAAGAAAAAGTAGCAATCAAGAAAGTGTT
FD938662       --> CAGGCTAAGTGCTTAGAGACAGAAGAAAAAGTAGCAATCAAGAAAGTGTT
EW715503       --> ..................................................
FD556202       --> ..................................................
EW725341       --> ..................................................

               251    -    301
UN20291        --> ACAAGACAAGAGATACAAGAACAGAGAGCTTCAGATCATGCGAATGCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- ..................................................
EW721900       <-- ..................................................
EW727929       <-- ..................................................
EV571809       <-- ..................................................
EX893039       <-- ..................................................
EX775660       <-- ..................................................
EY910058       <-- ..................................................
FD552546       <-- ..................................................
EW730729       <-- ..................................................
EX775312       <-- ..................................................
EY915245       --> ACAAGACAAGAGATACAAGAACAGAGAGCTTCAGATCATGCGAATGCTCG
EX771402       --> ACAAGACAAGAGATACAAGAACAGAGAGCTTCAGATCATG..........
EY913911       --> ACAAGACAAGAGATACAAGAACAGAGAGCTTCAGATCATGCGAATGCTCG
EY938912       --> GCAAGACAAGAGATACAAGAACAGAGAGCTTCAGATCATGCGAATGCTCG
FD969922       --> GCAAGACAAGAGATACAAGAACAGAGAGCTTCAGATCATGCGAATGCTCG
FD971387       --> ACAAGACAAGAGATACAAAAACAGAGAGCTTCAGATCATGCGAATGCTCG
EW718222       --> ACAAGACAAGAGATACAAGAACAGAGAGCTTCAGATCATGCGAATGCTCG
EX771233       --> ACAAGACAAGAGATACAAGAACAGAGAGCTTCAGATCATGCGAATGCTCG
FD973683       --> ACAAGACAAGAGATACAAAAACAGAGAGCTTCAGATCATGCGAATGCTCG
FD980195       --> TCAAGACAAGAGATACAAGAACAGAGAGCTTCAGATCATGCGAATGCTCG
EY906066       --> GCAAGACAAGAGATACAAGAACAGAGAGCTTCAGATCATGCGAATGCTCG
FD938662       --> ACAAGACGAGAGATACAAGAACAGAGAGCTTCAGATCATGCGAATGCTCG
EW715503       --> .......gAGAGATACAAGAACAGAGAGCTTCAGATCATGCGAATGCTCG
FD556202       --> .................gGAACAGAGAGCTTCAGATCATGCGAATGCTCG
EW725341       --> ..................................................

               301    -    351
UN20291        --> ACCATCCTAACGTCGTTGAGCTCAAGCATTCTTTCTTCTCCACCACTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- ..................................................
EW721900       <-- ..................................................
EW727929       <-- ..................................................
EV571809       <-- ..................................................
EX893039       <-- ..................................................
EX775660       <-- ..................................................
EY910058       <-- ..................................................
FD552546       <-- ..................................................
EW730729       <-- ..................................................
EX775312       <-- ..................................................
EY915245       --> ACCATCCTAACGTCGTTGAGCTCAAGCATTCTTTCTTCTCCACCACTGAG
EX771402       --> ..................................................
EY913911       --> ACCATCCTAACGTCGTTGAGCTCAAGCATTCTTTCTTCTCCACCACTGAG
EY938912       --> ACCATCCTAACGTCGTTGAGCTCAAGCATTCTTTCTTCTCCACCACTGAG
FD969922       --> ACCATCCTAACGTCGTTGAGCTCAAGCATTCTTTCTTCTCCACCACCGAG
FD971387       --> ACCATCCTAACGTCGTTGAGCTCAAGCATTCTTTCTTCTCCACCACTGAG
EW718222       --> ACCATCCTAACGTCGTTGAGCTCAAGCATTCTTTCTTCTCCACCACTGAG
EX771233       --> ACCATCCTAACGTCGTTGAGCTCAAGCATT-TTTCTTCTCCACCACTGAG
FD973683       --> ACCATCCTAACGTCGTTGAGCTCAAGCATTCTTTCTTCTCCACCACTGAG
FD980195       --> ACCATCCTAACGTCGTTGAGCTCAAGCATTCTTTCTTCTCCACCACTGAG
EY906066       --> ACCATCCTAACGTCGTTGAGCTCAAGCATTCTTTCTTCTCCACCACCGAG
FD938662       --> ACCATCCTAACGTCGTTGAGCTCAAGCATTCTTTCTTCTCCACCACTGAG
EW715503       --> ACCATCCTAACGTCGTTGAGCTCAAGCATTCTTTCTTCTCCACCACTGAG
FD556202       --> ACCATCCTAACGTCGTTGAGCTCAAGCACTCTTTCTTCTCCACCACTGAG
EW725341       --> ..................................................

               351    -    401
UN20291        --> AAAGACGAGCTTTATCTCAACCTTGTTCTCGAGTATGTACCTGAGACTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- ..................................................
EW721900       <-- ..................................................
EW727929       <-- ..................................................
EV571809       <-- ..................................................
EX893039       <-- ..................................................
EX775660       <-- ..................................................
EY910058       <-- ..................................................
FD552546       <-- ..................................................
EW730729       <-- ..................................................
EX775312       <-- ..................................................
EY915245       --> AAAGACGAGCTTTATCTCAACCTTGTTCTCGAGTATGTACCTGAGACTAT
EX771402       --> ..................................................
EY913911       --> AAAGGCGAGCTTTATCTCAACCTTGTTCTCGAGTATGTACCTGAGACTAT
EY938912       --> AAAGACGAGCTTTATCTCAACCTTGTTCTCGAGTATGTACCTGAGACTAT
FD969922       --> AAAGACGAGCTTTATCTCAACCTTGTTCTCGAGTATGTACCTGAGACTAT
FD971387       --> AAAGACGAGCTTTATCTCAACCTTGTTCTCGAGTATGTACCTGAGACTAT
EW718222       --> AAAGACGAGCTTTATCTCAACCTTGTTCTCGAGTATGTACCTGAGACTAT
EX771233       --> AAAGACGAGTTTTATCTCAACCTTGTTCTCGAGTATGTACCTGAGACTAT
FD973683       --> AAAGACGAGCTTTATCTCAACCTTGTTCTCGAGTATGTACCTGAGACTAT
FD980195       --> AAAGACGAGCTTTATCTCAACCTTGTTCTCGAGTATGTACCTGAGACTAT
EY906066       --> AAAGACGAGCTTTATCTCAACCTTGTTCTCGAGTATGTACCTGAGACTAT
FD938662       --> AAAGACGAGCTTTATCTCAACCTTGTTCTCGAGTATGTACCTGAGACTAT
EW715503       --> AAAGACGAGCTTTATCTCAACCTTGTTCTCGAGTATGTACCTGAGACTAT
FD556202       --> AAAGACGAGCTTTATCTCAACCTTGTTCTCGAGTATGTACCTGAGACTAT
EW725341       --> ..................................................

               401    -    451
UN20291        --> ATACCGTGCATCAAGATCTTACACCAAGATGAATCATCAGATGCCCCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- .........ATCAAGATCT-ACACCAAGATGA-TCATCAGATGCCC-TGA
EW721900       <-- ................................ATCATCAGATGCCC-TGA
EW727929       <-- ..................................................
EV571809       <-- ..................................................
EX893039       <-- ..................................................
EX775660       <-- ..................................................
EY910058       <-- ..................................................
FD552546       <-- ..................................................
EW730729       <-- ..................................................
EX775312       <-- ..................................................
EY915245       --> ATACCGTGCATCAAGATCTTACACCAAGATGAATCATCAGATGCCCCTGA
EX771402       --> ..................................................
EY913911       --> ATACCGTGCATCAAGATCTTACACCAAGATGAATCATCAGATGCCCCTGA
EY938912       --> ATACCGTGCATCAAGATCTTACACCAAGATGAATCATCAGATGCCCCTGA
FD969922       --> ATACCGGGCATCAAGATCTTACACCAAGATGAATCATCAGATGCCCCTGA
FD971387       --> ATACCGTGCATCAAGATCTTACACCAAGATGAATCATCAGATGCCCCTGA
EW718222       --> ATACCGTGCATCAAGATCTTACACCAAGATGAATCATCAGATGCCCCTGA
EX771233       --> ATACCGTGCATCAAGATCTTACACCAAGATGAATCATCAGATGCCCCTGA
FD973683       --> ATACCGTGCATCAAGATCTTACACCAAGATGAATCATCAGATGCCCCTGA
FD980195       --> ATACCGTGCATCAAGATCTTACACCAATATGAATCATCAGATGCCCCTGA
EY906066       --> ATACCGGGCATCAAGATCTTACACCAAGATGAATCATCAGATGCCCCTGA
FD938662       --> ATACCGTGCATCAAGATCTTACACCAAGATGAATCATCAGATGCCCCTGA
EW715503       --> ATACCGTGCATCAAGATCTTACACCAAGATGAATCATCAGATGCCCCTGA
FD556202       --> ATACCGTGCATCAAGATCTTACACCAAGATGAATCATCAGATGCCCCTGA
EW725341       --> ..................................................

               451    -    501
UN20291        --> TCTATATTCAGCTCTACACATATCAGATTTGCCGCGCTGTGAACTATCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- TCTATATTCAGCTCTACACATATCAGATTTGCCGCGCTGTAAATTA-CTA
EW721900       <-- TCTATAT-CAGCTCTACACATATCAGATT-GCCGCGCTGTGAACTGTCTA
EW727929       <-- .CTATATTCAGCTCTACACATATCAGATTTGCCGCGCTGTGAACTATCTA
EV571809       <-- ............TCTACACATATCAGATTTGCCGCGCTGTGAACTATCTA
EX893039       <-- ............TCTACACATATCAGATTTGCCGCGCTGTGAACTATCTA
EX775660       <-- ..............................................TCTA
EY910058       <-- ..................................................
FD552546       <-- ..................................................
EW730729       <-- ..................................................
EX775312       <-- ..................................................
EY915245       --> TCTATATTCAGCTCTACACATATCAGATTTGCCGCGCTGTAAATTACCTA
EX771402       --> ..................................................
EY913911       --> TCTATATTCAGCTCTACACATATCAGATTTGCCGCGCTGTAAATTACCTA
EY938912       --> TCTATATTCAGCTCTACACATATCAGATTTGCCGCGCTGTGAACTATCTA
FD969922       --> TCTATATTCAGCTCTACACGTATCAGATTTGCCGCGCTGTGAACTATCTA
FD971387       --> TCTATATTCAGCTCTACACATATCAGATTTGCCGCGCTGTGAACTATCTA
EW718222       --> TCTATATTCAGCTCTACACATATCAGATTTGCCGCGCTGTGAACTGTCTA
EX771233       --> TCTATATTCAGCTCTACACATATCAGATTTGCCGCGCTGTGAACTATCTA
FD973683       --> TCTATATTCAGCTCTACACATATCAGATTTGCCGCGCTGTGAACTATCTA
FD980195       --> TCTATATTCAGCTCTACACATATCAGATTTGCCGCGCTGTGAACTATCTA
EY906066       --> TCTATATTCAGCTCTACACGTATCAGATTTGCCGCGCTGTGAACTATCTA
FD938662       --> TCTATATTCAGCTCTACACATATCAGATTTGCCGCGCTGTGAACTATCTA
EW715503       --> TCTATATTCAGCTCTACACATATCAGATTTGCCGCGCTGTGAACTATCTA
FD556202       --> TCTATATTCAGCTCTACACATATCAGATTTGCCGCGCTGTGAACTATCTA
EW725341       --> ..................................................

               501    -    551
UN20291        --> CATCGAGCTGTTGGAGTGTGCCACCGTGACATTAAACCACAAAACCTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- CATCGAGCTGTTGGAGTGTGCCACCGTGACATTAAACCACAAAACCTATT
EW721900       <-- CATCGAGTTGTTGGAGTGTGCCACCGTGACATTAAACCACAAAACCTATT
EW727929       <-- CATCGAGCTGTTGGAGTGTGCCACCGTGACATTAAACCACAAAACCTATT
EV571809       <-- CATCGAGCTGTTGGAGTGTGCCACCGTGACATTAAACCACAAAACCTATT
EX893039       <-- CATCGAGCTGTTGGAGTGTGCCACCGTGACATTAAACCACAAAACCTATT
EX775660       <-- CATCGAGCTGTTGGAGTGTGCCACCGTGACATTAAACCACAAAACCTATT
EY910058       <-- .................................................T
FD552546       <-- ..................................................
EW730729       <-- ..................................................
EX775312       <-- ..................................................
EY915245       --> CATCGAGCTGTTGGAGTGTGCCACCGTGACATTAAACCACAAAACCTATT
EX771402       --> ..................................................
EY913911       --> CATCGAGCTGTTGGAGTGTGCCACCGTGACATTAAACCACAAAACCTATT
EY938912       --> CATCGAGCTGCTGGAGTGTGCCACCGTGACATTAAACCACAAAACCTATT
FD969922       --> CATCGAGCTGTTGGAGTGTGCCACCGTGACATTAAACCACAAAACCTATT
FD971387       --> CACCGAGCTGTTGGAGTGTGCCACCGTGACATTAAACCACAAAACCTATT
EW718222       --> CATCGAGTTGTTGGAGTGTGCCACCGTGACATTAAACCACAAAACCTATT
EX771233       --> CATCGAGCTGTTGGAGTGTGCCACCGTGACATTAAACCACAAAACCTATT
FD973683       --> CATCGAGCTGTTGGAGTGTGCCACCGTGACATTAAACCACAAAACCTATT
FD980195       --> CATCGAGCTGCTGGAGTGTGCCACCGTGACATTAAACCACAAAACCTATT
EY906066       --> CATCGAGCTGTTGGAGTGTGCCACCGTGACATTAAACCACAAAACCTATT
FD938662       --> CATCGAGCTGTTGGAGTGTGCCACCGTGACATTAAACCACAAAACCTATT
EW715503       --> CATCGAGCTGTTGGAGTGTGCCACCGTGACATTAAACCACAAAACCTATT
FD556202       --> CATCGAGCTGTTGGAGTGTGCCACCGTGACATTAAACCACAAAACCTATT
EW725341       --> ..................................................

               551    -    601
UN20291        --> GGTGAATAATGTTACACATGAGGTGAAGATATGTGACTTTGGAAGCGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- GGTGAATAATGTCACACATGAGGTGAAGATATGTGACTTTGGAAGCGCGA
EW721900       <-- GGTGAATAATGTTACACATGAGGTGAAGATATGTGACTTTGGAAGCGCGA
EW727929       <-- GGTGAATAATGTTACACATGAGGTGAAGATATGTGACTTTGGAAGCGCGA
EV571809       <-- GGTGAATAATGTTACACATGAGGTGAAGATATGTGACTTTGGAAGCGCGA
EX893039       <-- GGTGAATAATGTTACACATGAGGTGAAGATATGTGACTTTGGAAGCGCGA
EX775660       <-- GGTGAATAATGTTACACATGAGGTGAAGATATGTGACTTTGGAAGCGCGA
EY910058       <-- GGTGAATAATGTCACACATGAGGTGAAGATATGTGACTTTGGAAGCGCGA
FD552546       <-- ..................................................
EW730729       <-- ..................................................
EX775312       <-- ..................................................
EY915245       --> GGTGAATAATGTCACACATGAGGTGAAGATATGTGACTTTGGAAGCGCGA
EX771402       --> ..................................................
EY913911       --> GGTGAATAATGTCACACATGAGGTGAAGATATGTGACTTTGGAAGCGCGA
EY938912       --> GGTGAATAATGTTACACATGAGGTGAAGATATGTGACTTTGGAAGCGCGA
FD969922       --> GGTGAATAATGTTACACATGAGGTGAAGATATGTGACTTTGGAAGCGCAA
FD971387       --> GGTGAATAATGTTACACA................................
EW718222       --> GGTGAATAATGTTACACATGAGGTGAAGATATGTGACTTTGGAAGCGCGA
EX771233       --> GGTGAATAATGTTACACATGAGGTGAAGATATGTGACTTTGGAAGCGCGA
FD973683       --> GGTGAATAATGTTACACATGAGGTGAAGATATGTGACTTTGGAAGCGCGA
FD980195       --> GGTGAATAATGTTACACATGAGGTGAAGATATGTGACTTTGGAAGCGCGA
EY906066       --> GGTGAATAATGTTACACATGAGGTGAAGATATGTGACTTTGGAAGCGCAA
FD938662       --> GGTGAATAATGTTACACATGAGGTGAAGATATGTGACTTTGGAAGCGCGA
EW715503       --> GGTGAATAATGTTACACATGAGGTGAAGATATGTGACTTTGGAAGCGCGA
FD556202       --> GGTGAATAATGTTACACATGAGGTGAAGATATGTGACTTTGGAAGCGCGA
EW725341       --> ..................................................

               601    -    651
UN20291        --> AAATGCTGATTCCTGGAGAACCCAATATATCTTACATATGCTCAAGGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- AAATGCTGATTCCTGGAGAACCCAATATATCTTACATATGCTCAAGGTAT
EW721900       <-- AAATGCTGATTCCTGGAGAACCCAATATATCTTACATATGCTCAAGGTAT
EW727929       <-- AAATGCTGATTCCTGGAGAACCCAATATATCTTACATATGCTCAAGGTAT
EV571809       <-- AAATGCTGGTTCCTGGAGAACCCAATATATCTTACATATGCTCAAGGTAT
EX893039       <-- AAATGCTGATTCCTGGAGAACCCAATATATCTTACATATGCTCAAGGTAT
EX775660       <-- AAATGCTGATTCCTGGAGAACCCAATATATCTTACATATGCTCAAGGTAT
EY910058       <-- AAATGCTGATTCCTGGAGAACCCAATATATCTT--ATATGCTCAAGGTAT
FD552546       <-- ..................................................
EW730729       <-- ..................................................
EX775312       <-- ..................................................
EY915245       --> AAATGCTGATTCCTGGAGAACCCAATATATCTTACATATGCTCAAGGTAT
EX771402       --> ..................................................
EY913911       --> AAATGCTGATTCCTGGAGAACCCAATATATCTTA--TATGCTCAAGGTAT
EY938912       --> AAATGCTGATTCCTGGAGAACCCAATATATCTTACATATGCTCAAGGTAT
FD969922       --> AAATACTGATTCCGGGAGAACCCAATATATCTTACATATGCTCAAGGTAT
FD971387       --> ..................................................
EW718222       --> AAATGCTGATTCCTGGAGAACCCAATATATCTTACATATGCTCA-GGTAT
EX771233       --> AAATGCTGATTCCTGGAGAACCCAATATATCTTACATATGCT........
FD973683       --> AAATGCTGATTCCTGGAGAACCCAATATATCTTACATATGCTCAAGGTAT
FD980195       --> AAATGCTGATTCCTGGAGAACCCAATATATCTTACATATGCTCAAGGTAT
EY906066       --> AAA...............................................
FD938662       --> AAATGCTGATTCCTGGAGAACCCAATATATCTTACATATGCTCAAGGTAT
EW715503       --> AAATGCTGATTCCTGGAGAACCCAATATATCTTACATATGCTCAAGGTAT
FD556202       --> AAATGCTGATTCCTGGAGAACCCAATATATCTTACATATGCTCAAGGTAT
EW725341       --> ..................................................

               651    -    701
UN20291        --> TACAGAGCTCCAGAACTCATCTTTGGAGCAACTGAGTACACAACCGCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- TACAGAGCTCCAGAACTCATCTTTGGAGCAACTGAGTACACAACCGCCAT
EW721900       <-- TACAGAGCTCCAGAACTCATCTTTGGAGCAACTGAGTACACAACCGCCAT
EW727929       <-- TACAGAGCTCCAGAACTCATCTTTGGAGCAACTGAGTACACAACCGCCAT
EV571809       <-- TACAGAGCTCCAGAACTCATCTTTGGAGCAACTGAGTACACAACCGCCAT
EX893039       <-- TACAGAGCTCCAGAACTCATCTTTGGAGCAACTGAGTACACAACCGCCAT
EX775660       <-- TACAGAGCTCCAGAACTCATCTTTGGAGCAACTGAGTACACAACCGCCAT
EY910058       <-- TACAGAGCTCCAGAACTCATCTTTGGAGCAACTGAGTACACAACCGCCAT
FD552546       <-- ..................................................
EW730729       <-- ..................................................
EX775312       <-- ..................................................
EY915245       --> TACAGAGCTCCAGAACTCATCTTTGGAGCAACTGAGTACACAACCGCCAT
EX771402       --> ..................................................
EY913911       --> TACAGAGCTCCAGAACTCATCTTTGGAGCAACTGAGTACACAACCGCCAT
EY938912       --> TACAGAGCTCCAGAACTCATCTTTGGAGCAACTGAGTACACAACCGCCAT
FD969922       --> TACAGAGCTCCAGAACTCATCTTTGGAGCAACTGAGTACACAACCGCCAT
FD971387       --> ..................................................
EW718222       --> TACAGAGCTCCAGAACTCATCTTTGGAGCAACTGAGTACACAACCGCCAT
EX771233       --> ..................................................
FD973683       --> TACAGAGCTCCAGAACTCATCTTTGGAGCAACTGAGTACACAACCGCCAT
FD980195       --> TACAGAGCTCCAGAACTCATCTTTGGAGCAACTGAGTACACAACCGC-AT
EY906066       --> ..................................................
FD938662       --> TACAGAGCTCCAGAACTCATCTTTGGAGCAACTGAGTACACAACCGCCAT
EW715503       --> TACAGAGCTCCAGAACTCATCTTTGGAGCAACTGAGTACACAACCGCCAT
FD556202       --> TACAGAGCTCCAGAACTCATCTTTGGAGCAACTGAGTACACAACCGCCAT
EW725341       --> ..................................................

               701    -    751
UN20291        --> CGATATGTGGTCTGTAGGTTGTGTAATGGCTGAGCTTTTTCTTGGACATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- CGATATGTGGTCTGTAGGTTGTGTAATGGCTGAGCTTTTTCTTGGACATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW721900       <-- CGATATGTGGTCTGTAGGTTGTGTAATGGCTGAGCTTTTTCTTGGACATC  Raphanus sativus var. oleiformis
EW727929       <-- CGATATGTGGTCTGTAGGTTGTGCAATGGCTGAGCTTTTTCTTGGACATC  Raphanus sativus cv Early Scarlet Globe
EV571809       <-- CGATATGTGGTCTGTAGGTTGTGTAATGGCTGAGCTTTTTCTTGGACATC  Raphanus raphanistrum subsp. landra
EX893039       <-- CGATATGTGGTCTGTAGGTTGTGTAATGGCTGAGCTTTTTCTTGGACATC  Raphanus sativus var. oleiformis
EX775660       <-- CGATATGTGGTCTGTAGGTTGTGTAATGGCTGAGCTTTTTCTTGGACATC  Raphanus raphanistrum subsp. landra
EY910058       <-- CGATATGTGGTCTGTAGGTTGTGTAATGGCTGAGCTTTTTCTTGGACATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552546       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW730729       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX775312       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY915245       --> CGATATGTGGTCTGTAGGT-GTGTAATGGCTGAGCTTTTTCTTGGACATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX771402       --> ..................................................  Raphanus raphanistrum subsp. landra
EY913911       --> CGATATGTGGTCTG....................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938912       --> CGATATGTGGTCTGTAGGT-GTGTAATGGCTGAGCTTTTTCTTGGACATC  Raphanus sativus cv Early Scarlet Globe
FD969922       --> CGATATGTGGTCTGTAGGT-GTGTAATGGCTGAACTTTTTCTTGGACATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971387       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW718222       --> CGATATGTGGTCTGTAG-TTGTGTA-TGGCTGAGCTTTT-CTTGGACATC  Raphanus sativus var. oleiformis
EX771233       --> ..................................................  Raphanus raphanistrum subsp. landra
FD973683       --> CGATATGTGGTCTGTAGGT-GTGTAATGGCTGAG................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980195       --> CGATATGCGGT.......................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906066       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD938662       --> CGATATGTGGTCTGTAG-TTGTGTAATGGCTGAGCTTTTTCTTGGACATC  Raphanus sativus var. oleiformis
EW715503       --> CGATATGTGGTCTGTAGGTTGTGTAATGGCTGAGCTTTTTCTTGGACATC  Raphanus sativus var. oleiformis
FD556202       --> CGATATGTGGTCCGTAGGTTGTGTAATGGCTGAGCTTTTTCTTGGACATC  Raphanus raphanistrum subsp. landra
EW725341       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               751    -    801
UN20291        --> CTTTGTTCCCTGGAGAGACTAGTGTTGATCAATTGGTGGAGATCATTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- CTTTGTTCCCTGGAGAGACTAGTGTTGATCAATTGGTGGAGATCATTAAG
EW721900       <-- CTTTGTTCCCTGGAGAGACTAGTGTTGATCAATTGGTGGAGATCATTAAG
EW727929       <-- CTTTGTTCCCTGGAGAGACTAGTGTTGATCAATTGGTGGAGATCATTAAG
EV571809       <-- CTTTGTTCCCTGGAGAGACTAGTGTTGATCAATTGGTGGAGATCATTAAG
EX893039       <-- CTTTGTTCCCTGGAGAGACTAGTGTTGATCAATTGGTGGAGATCATTAAG
EX775660       <-- CTTTGTTCCCTGGAGAGACTAGTGTTGATCAATTGGTGGAGATCATTAAG
EY910058       <-- CTTTGTTCCCTGGAGAGACTAGTGTTGATCAATTGGTGGAGATCATTAAG
FD552546       <-- ......TCCCTGGAGAGACTAGTGTTGATCAATTGGTGGAGATCATTAAG
EW730729       <-- ..................................................
EX775312       <-- ..................................................
EY915245       --> CTTTGTTCCCTGGAGAGACTAGTGT-GATCAATTGGTGGAGATCATTAAG
EX771402       --> ..................................................
EY913911       --> ..................................................
EY938912       --> CTCTGTTCC-TGGAGAGA-TAGTG..........................
FD969922       --> CTCTGT-CCCTGGAGAGACTAGTGTTGATCAATTGGTGGAGATC......
FD971387       --> ..................................................
EW718222       --> CTTTGT--CCTGGAGAGACTAGTGTg........................
EX771233       --> ..................................................
FD973683       --> ..................................................
FD980195       --> ..................................................
EY906066       --> ..................................................
FD938662       --> CTTTGTTCCCTGGAGAGACTAGTGTTGATCAATTGGTGGAGATCATTAAG
EW715503       --> CTTTGTTCCCTGGAGAGACTAGTGTTGATCAATTGGTGGAGATCATTAAG
FD556202       --> CTTTGTTCCCTGGAGAGACTAGTGTTGATCAATTGGTGGAGATCATTAAG
EW725341       --> ..................................................

               801    -    851
UN20291        --> GTTTTGGGAACACCAGCAAGAGAAGAGATAAAGAACATGAACCCTAGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- GTTTTGGGAACACCAGCAAGAGAAGAGATAAAGAACATGAACCCTAGTTA
EW721900       <-- GTTTTGGGAACACCAGCAAGAGAAGAGATAAAGAACATGAACCCTAGTTA
EW727929       <-- GTTTTGGGAACACCAGCAAGAGAAGAGATAAAGAACATGAACCCTAGTTA
EV571809       <-- GTTTTGGGAACACCAGCAAGAGAAGAGATAAAGAACATGAACCCTAGTTA
EX893039       <-- GTTTTGGGAACACCAGCAAGAGAAGAGATAAAGAACATGAACCCTAGTTA
EX775660       <-- GTTTTGGGAACACCAGCAAGAGAAGAGATAAAGAACATGAACCCTAGTTA
EY910058       <-- GTTTTGGGAACACCAGCAAGAGAAGAGATAAAGAACATGAACCCTAGTTA
FD552546       <-- GTTTTGGGAACACCAGCAAGAGAAGAGATAAAGAACATGAACCCTAGTTA
EW730729       <-- ..................................................
EX775312       <-- ..................................................
EY915245       --> -TTTTGGGAACACCAGCA-GAGAAGAG.......................
EX771402       --> ..................................................
EY913911       --> ..................................................
EY938912       --> ..................................................
FD969922       --> ..................................................
FD971387       --> ..................................................
EW718222       --> ..................................................
EX771233       --> ..................................................
FD973683       --> ..................................................
FD980195       --> ..................................................
EY906066       --> ..................................................
FD938662       --> -TTTTGGGAACACCAGCAAGAGA-GAGATAAAGAACATGAACCCTAGTTA
EW715503       --> GTTTTGGGAACACCAGCAAGAGAAGAGATAAAGAACATGAACCCTAGTTA
FD556202       --> GTTTTGGGAACACCAGCAAGAGAAGAGATAAAGAACATGAACCCTAGTTA
EW725341       --> ..................................................

               851    -    901
UN20291        --> CAATGATTTCAAGTTCCCACAGATAAAACCTCAGCCATGGCACAAGATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- CAATGATTTCAAGTTCCCTCAGATAAAACCTCAGCCATGGCACAAGATTT
EW721900       <-- CAATGATTTCAAGTTCCCACAGATAAAACCTCAGCCATGGCACAAGATTT
EW727929       <-- CAATGATTTCAAGTTCCCACAGATAAAACCTCAGCCATGACACAAGATTT
EV571809       <-- CAATGATTTCAATTTCCCACAGATAAAACCTCAGCCATGGCACAAGATTT
EX893039       <-- CAATGATTTCAAGTTCCCACAGATAAAACCTCAGCCATGGCACAAGATTT
EX775660       <-- CAATGATTTCAAGTTCCCACAGATAAAACTTCAGCCATGGCACAAGATTT
EY910058       <-- CAATGATTTCAAGTTCCCTCAGATAAAACCTCAGCCATGGCACAAGATTT
FD552546       <-- CAATGATTTCAAGTTCCCACAGATAAAACCTCAGCCATGGCACAGGATTT
EW730729       <-- ..................................................
EX775312       <-- ..................................................
EY915245       --> ..................................................
EX771402       --> ..................................................
EY913911       --> ..................................................
EY938912       --> ..................................................
FD969922       --> ..................................................
FD971387       --> ..................................................
EW718222       --> ..................................................
EX771233       --> ..................................................
FD973683       --> ..................................................
FD980195       --> ..................................................
EY906066       --> ..................................................
FD938662       --> CAATGATTTCAAGTTCCCACAGATAAAACCTCAGC-ATGGCACAAGATT.
EW715503       --> CAATGATTTCAAGTTCCCACAGATAAAACCTCAGCCATGGCACAAGATTT
FD556202       --> CAATGATTTCAAGT....................................
EW725341       --> ..................................................

               901    -    951
UN20291        --> TTAGTAGACAGGTACCTCCTGAAGCATTGGATCTTGGCTCTAGACTCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- TTAGTAGACAGGTACCTCCTGAAGCATTGGATCTTGGCTCTAGACTCCTC
EW721900       <-- TTAGTAGACAGGTACCTCCTGAAGCATTGGATCTTGGCTCTAGACTCCTC
EW727929       <-- TTAGTAGACAGGTACCTCCTGAAGCATTGGATCTTGGCTCTAGACTCCTC
EV571809       <-- TTAGTAGACAGGTACCTCCTGAAGCATTGGATCTTGGCTCTAGACTCCTC
EX893039       <-- TTAGTAGACAGGTACCTCCTGAAGCATTGGATCTTGACTCTAGACTCCTC
EX775660       <-- TTAGTAGACAGGTACCTCCTGAAGCATTGGATCTTGGCTCTAGACTCCTC
EY910058       <-- TTAGTAGACAGGTACCTCCTGAAGCATTGGATCTTGGCTCTAGACTCCTC
FD552546       <-- TTAGTAGACAGGTACCTCCTGAAGCATTGGATCTTGGCTCTAGACTCCTC
EW730729       <-- ..................................................
EX775312       <-- ..................................................
EY915245       --> ..................................................
EX771402       --> ..................................................
EY913911       --> ..................................................
EY938912       --> ..................................................
FD969922       --> ..................................................
FD971387       --> ..................................................
EW718222       --> ..................................................
EX771233       --> ..................................................
FD973683       --> ..................................................
FD980195       --> ..................................................
EY906066       --> ..................................................
FD938662       --> ..................................................
EW715503       --> TTAGTA............................................
FD556202       --> ..................................................
EW725341       --> ..................................................

               951    -   1001
UN20291        --> CAGTATTCACCAAACCTGAGATGCTCAGCGCTTGAAGCCTGTGCGCACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- CAGTATTCACCAAACCTGAGATGCTCAGCGCTTGAAGCCTGTGCACACCC
EW721900       <-- CAGTATTCACCAAACCTGAGATGCTCAGCGCTTGAAGCCTGTGCGCACCC
EW727929       <-- CAGTATTCACCAAACCTGAGATGCTCAGCGCTTGAAGCCTGTGCGCACCC
EV571809       <-- CAGTATTCACCAAACCTGAGATGCTCAGCGCTTGAAGCCTGTGCGCACCC
EX893039       <-- CAGTATTCACCAAACCTGAGATGCTCAGCGCTTGAAGCCTGTGCGCACCC
EX775660       <-- CAGTATTCACCAAACCTGAGATGTTCAGCGCTTGAAGCCTGTGCGCACCC
EY910058       <-- CAGTATTCACCAAACCTGAGATGCTCAGCGCTTGGAGCCTGTGCACACCC
FD552546       <-- CAGTATTCACCAAACCTGAGATGCTCAGCGCTTGAAGCCT--GCGCACCC
EW730729       <-- ...................................gGCCTGTGCGCACCC
EX775312       <-- ..................................................
EY915245       --> ..................................................
EX771402       --> ..................................................
EY913911       --> ..................................................
EY938912       --> ..................................................
FD969922       --> ..................................................
FD971387       --> ..................................................
EW718222       --> ..................................................
EX771233       --> ..................................................
FD973683       --> ..................................................
FD980195       --> ..................................................
EY906066       --> ..................................................
FD938662       --> ..................................................
EW715503       --> ..................................................
FD556202       --> ..................................................
EW725341       --> ...................................gGCCTGTGCGCACCC

               1001   -   1051
UN20291        --> GTTCTTTGATGCTCTGAGAGACCCCAACGCATCCTTGCCTAATGGAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- GTTCTTTGATGCTCTGAGAGACCCCGACGCATCCTTGCCTAGTGGAAGAG
EW721900       <-- GTTCTTTGATGCTCTGAGAGACCCCAACGCATCCTTGCCTAATGGAAGAG
EW727929       <-- GTTCTTTGATGCTTTGAGATACCCCAACGCATCCTTGCCTAATGGAAGAG
EV571809       <-- GTTCTTTGATGCTCTGAGAGACCCCAACGCATCCTTGCCTAATGGAAGAG
EX893039       <-- GTTCTTTGATGCTCTGAGAGACCCCAACGCATCCTTGCCTAATGGAAGAG
EX775660       <-- GTTCTTTGATGTTCTGAGAGACCCCAACGCATCCTTGCCTAATGGAAGAG
EY910058       <-- GTTCTTTGATGCTCTGAGAGACCCCAACGCATCCTTGCCTAATGGAAGAG
FD552546       <-- GTTCTTTGATGCTTTGAGAGACCCCAACGCATCCTTGCCTAATGGAAGAG
EW730729       <-- GTTCTTTGATGCTCTGAGAGACCCCAACGCATCCTTGCCTA-TGGAAGAG
EX775312       <-- ..................................................
EY915245       --> ..................................................
EX771402       --> ..................................................
EY913911       --> ..................................................
EY938912       --> ..................................................
FD969922       --> ..................................................
FD971387       --> ..................................................
EW718222       --> ..................................................
EX771233       --> ..................................................
FD973683       --> ..................................................
FD980195       --> ..................................................
EY906066       --> ..................................................
FD938662       --> ..................................................
EW715503       --> ..................................................
FD556202       --> ..................................................
EW725341       --> GTTCTTTGATGCTCTGAGAGACCCCAACGCATCCTTGCCTA-TGGAAGAG

               1051   -   1101
UN20291        --> CACTTCCTCCATTGTTTGATTTCACAGCTCAAGAATTGGCTGGTGCATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- CACTTCCTCCATTGTTTGATTTCACAGCTCAAGAATTGGCTGGTGCATCT
EW721900       <-- CACTTCCTCCATTGTTTGATTTCACAGCTCAAGAATTGGCTGGTGCATCT
EW727929       <-- CACTTCCTCCATTGTTTGATTTTACAGCTCAAGAATTGGCTGGTGCATCT
EV571809       <-- CACTTCCTCCATTGTTTGATTTCACAGCTCAAGAATTGGCTGGTGCATCT
EX893039       <-- CACTTCCTCCATTGATTGATTTCACAGCTCAAGAATTGGCTGGTGCATCT
EX775660       <-- CACTTCCTCCATTGTTTGATTTCACAGCTCAAGAATTGGCTGGTGCATCT
EY910058       <-- CACTTCCTCCATTGTTTGATTTCACAGCTCAAGAATTGGCTGGTGCATCT
FD552546       <-- CACTTCCTCCATTGTTTGATTTCACAGCTCAAGAATTGGCTGGTGCATCT
EW730729       <-- CACTTCCTCCATTGTTTGATTTCACAGCTCAAGAATTGGCTGGTGCATCT
EX775312       <-- ..................................................
EY915245       --> ..................................................
EX771402       --> ..................................................
EY913911       --> ..................................................
EY938912       --> ..................................................
FD969922       --> ..................................................
FD971387       --> ..................................................
EW718222       --> ..................................................
EX771233       --> ..................................................
FD973683       --> ..................................................
FD980195       --> ..................................................
EY906066       --> ..................................................
FD938662       --> ..................................................
EW715503       --> ..................................................
FD556202       --> ..................................................
EW725341       --> CACTTCCTCCATTGTTTGATTTCACAGCTCAAGAATTGGCTGGTGCATCT

               1101   -   1151
UN20291        --> GTTGAACTGCGTCATCGCTTAATCCCTGAGCATGCAAGGAAATGACCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- GTTGAACTGCGTCATCGCTTAATCCCTGAGCATGCAAGGAAATGACCTCT
EW721900       <-- GTTGAACTGCGTCATCGCTTAATCCCTGAGCATGCAAGGAAATGACCTCT
EW727929       <-- GTTGAACTGCGTCATCGCTTAATCCCTGAGCATGCAAGGAAATGACCTCT
EV571809       <-- GTTGAACTGCGTCATCGCTTAATCCCTGAGCATGCAAGGAAATGACCTCT
EX893039       <-- GTTGAACTGCGTCATCGCTTAATCCCTGAGCATGCAAGGAAATGACCTCT
EX775660       <-- GTTGAACTGCGTCATCGCTTAATCCCTGAGCATGCAAGGAAATGACCTCT
EY910058       <-- GTTGAACTGCGTCATCGCTTAATCCCTGAGCATGCAAGGAAATGACCTCT
FD552546       <-- GTTGAACTGCGTCATCGCTTAATCCCTGAGCATGCAAGGAAATGACCTTT
EW730729       <-- GTTGAACTGCGTCATCGCTTAATCCCTGAGCATGCAAGGAAATGACCTCT
EX775312       <-- ...GAACTGCGTCATCGCTTAATCCCTGAGCATGCAAGGAAATGACCTCT
EY915245       --> ..................................................
EX771402       --> ..................................................
EY913911       --> ..................................................
EY938912       --> ..................................................
FD969922       --> ..................................................
FD971387       --> ..................................................
EW718222       --> ..................................................
EX771233       --> ..................................................
FD973683       --> ..................................................
FD980195       --> ..................................................
EY906066       --> ..................................................
FD938662       --> ..................................................
EW715503       --> ..................................................
FD556202       --> ..................................................
EW725341       --> GTTGAACTGCGTCATCGCTTAATCCCTGAGCATGCAAGGAAATGACCTCT

               1151   -   1201
UN20291        --> TCTTTTCTCTCTACACATGTCCTTGTTCACTGACCTCTGCAACCACT-CG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- TCTTCTCTCTCTACACATGTCCTTGTTCACTGACCTCTGCAACCACTTGG
EW721900       <-- TCTCTTCTCTCTACACATGTCCTTGTTCACTGACCTCTGCAACCACT-CG
EW727929       <-- TCTTTTCTCTCTACACATGTCCTTGTTCACTGACCTCTGCAACCACT-CG
EV571809       <-- TCTTTTCTCTCTACACATGTCCTTGTTCACTGACCTCTGCAACCACT-CG
EX893039       <-- TCTTTTCTCTCTACACATGTCCTTGTTCACTGACCTCTGCAACCACT-CG
EX775660       <-- TCTTTTCTCTCTACACATGTCCTTGTTCACTGACCTCTGCAACCACT-CG
EY910058       <-- TCTTCTCTCTCTACACATGTCCTTGTTCACTGACCTCTGCAACCACTTGG
FD552546       <-- TCTTTTCTCTCTACACATGTCCTTGTTCACTGACCTCTGCAACCACT-CG
EW730729       <-- TCTTTTCTCTCTACACATGTCCTTGTTCACTGACCTCTGTAACCACT-CG
EX775312       <-- TCTTTTCTCTCTACACATGTCCTTGTTCACTGACCTCTGCAACCACT-CG
EY915245       --> ..................................................
EX771402       --> ..................................................
EY913911       --> ..................................................
EY938912       --> ..................................................
FD969922       --> ..................................................
FD971387       --> ..................................................
EW718222       --> ..................................................
EX771233       --> ..................................................
FD973683       --> ..................................................
FD980195       --> ..................................................
EY906066       --> ..................................................
FD938662       --> ..................................................
EW715503       --> ..................................................
FD556202       --> ..................................................
EW725341       --> TCTTTTCTCTCTACACATGTCCTTGTTCACTGACCTCTGTAACCACT-CG

               1201   -   1251
UN20291        --> GACTAGTAGTTAAAAAAGTGTAATAATTTTTATAAGTTTGCAACTTTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- GACTAGTAGTTAAAAA-GTGTAATAAATTTTATAAGTTTGCGACTTTGTA
EW721900       <-- GACTAGTAGTTAAAAAAGTGTAATAATTTTTATAAGTTTGCAACTTTGTA
EW727929       <-- GACTAGTAGTTAAAAAAGTGTAATAATTTTTATAAGTTTGCAACTTTGTA
EV571809       <-- GACTAGTAGTTAAAAAAGTGTAATAATTTTTATAAGTTTGCAACTTTGTA
EX893039       <-- GACTAGTAGTTAAAAAAGTGTAATAATTTTTATAAGTTTGCAACTTTGTA
EX775660       <-- GACTAGTAGTTAAAAAAGTGTAATAATTTTTATAAGTTTGCAACTTTGTA
EY910058       <-- GACTAGTAGTTAAAAA-GTGTAATAAATTTTATAAGTTTGCGACTTTGTA
FD552546       <-- GACTAGTAGTTAAAAAAGTGTAATAATTTTTATAAGTTTGCAACTTTGTA
EW730729       <-- GACTAGTAGTTAAAAAAGTGTAATAATTTTTATAAGTTTGCAACTTTGTA
EX775312       <-- GACTAGTAGTTAAAAAAGTGTAATAATTTTTATAAGTTTGCAACTTTGTA
EY915245       --> ..................................................
EX771402       --> ..................................................
EY913911       --> ..................................................
EY938912       --> ..................................................
FD969922       --> ..................................................
FD971387       --> ..................................................
EW718222       --> ..................................................
EX771233       --> ..................................................
FD973683       --> ..................................................
FD980195       --> ..................................................
EY906066       --> ..................................................
FD938662       --> ..................................................
EW715503       --> ..................................................
FD556202       --> ..................................................
EW725341       --> GACTAGTAGTTAAAAAAGTGTAATAATTTTTATAAGTTTGCAACTTTGTA

               1251   -   1301
UN20291        --> GCTTCCATTGTTGTATACAGAAATGCAGAATTTTCCAACCCTTTTCTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911126       <-- GCTTCCATTGTTGTATACAGAAATGCAGAATTTTCC..............
EW721900       <-- GCTTCCATTGTTGTATACAGAAATGCAGAATTTTCC..............
EW727929       <-- GCTTCCATTGTTGTATACAGAAATGCAGAATTTTCCAACTCTTTTCTCTA
EV571809       <-- GCTTCCATTGTTGTATACAGAAATGCAGAATTTTCCAAC...........
EX893039       <-- GCTTCCATTGTTGTATACAGAAATGCAGAATTTT................
EX775660       <-- GCTTCCATTGTTGTATACAGAAATGCAGAATTTTCC..............
EY910058       <-- GCTTCCATTGTTGTATACAGAAATGCAGAATTTTCCAACCCT........
FD552546       <-- GCTTCCATTGTTGTATACAGAAATGCGGAATTTTCCAACtcg........
EW730729       <-- GCTTCCATTGTTGTATACAGAAATGCAGAATTTTCCAACC..........
EX775312       <-- GCTTCCATTGTTGTATACAGAAATGCAGAATTTTCCAAa...........
EY915245       --> ..................................................
EX771402       --> ..................................................
EY913911       --> ..................................................
EY938912       --> ..................................................
FD969922       --> ..................................................
FD971387       --> ..................................................
EW718222       --> ..................................................
EX771233       --> ..................................................
FD973683       --> ..................................................
FD980195       --> ..................................................
EY906066       --> ..................................................
FD938662       --> ..................................................
EW715503       --> ..................................................
FD556202       --> ..................................................
EW725341       --> GCTTCCATTGTTGTATACAGAAATGCAGAATTTTCCAACC..........

               1301   -   1351
UN20291        --> TT
                   ~~
EY911126       <-- ..
EW721900       <-- ..
EW727929       <-- TT
EV571809       <-- ..
EX893039       <-- ..
EX775660       <-- ..
EY910058       <-- ..
FD552546       <-- ..
EW730729       <-- ..
EX775312       <-- ..
EY915245       --> ..
EX771402       --> ..
EY913911       --> ..
EY938912       --> ..
FD969922       --> ..
FD971387       --> ..
EW718222       --> ..
EX771233       --> ..
FD973683       --> ..
FD980195       --> ..
EY906066       --> ..
FD938662       --> ..
EW715503       --> ..
FD556202       --> ..
EW725341       --> ..