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Alignment for radish unigene UN20307

               1      -     51
UN20307        --> GGGATGGTGTTAGGTGTACCAGATCCCATCCCCCTCCCTCCTTTTAATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- ..................................................
EW728759       <-- ..................................................
EW728818       <-- ..................................................
EW720284       <-- ..................................................
FD573485       <-- ..................................................
EV541887       <-- ..................................................
FD566700       <-- ..................................................
EY904332       <-- ..................................................
FD942904       <-- ..................................................
EW721700       <-- ..................................................
EV544617       <-- ..................................................
EY936081       <-- ..................................................
EY912628       <-- ..................................................
EY912792       <-- ..................................................
EY935229       <-- ..................................................
EX890874       <-- ..................................................
EY933797       <-- ..................................................
FD562912       --> GGGATGGTGTTAGGTGTACCAGATCCCATCCCCCTCCCTCCTTTTAATGA
EV537709       --> ..................................................
EW716096       --> ..................................................
EW716416       --> ..................................................
EY908664       --> ..................................................
EY917045       --> ..................................................
EV549067       --> ..................................................
EW723571       --> ..................................................
EX886504       --> ..................................................
EY937519       --> ..................................................
FD569243       --> ..................................................
EY917244       --> ..................................................
EY940303       --> ..................................................
EY939258       --> ..................................................
EW724219       --> ..................................................
FD542225       --> ..................................................

               51     -    101
UN20307        --> CGGAGATAACAAGGAAGGGAACTACACCACTCCAAAAACAACTCATTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- ..................................................
EW728759       <-- ..................................................
EW728818       <-- ..................................................
EW720284       <-- ..................................................
FD573485       <-- ..................................................
EV541887       <-- ..................................................
FD566700       <-- ..................................................
EY904332       <-- ..................................................
FD942904       <-- ..................................................
EW721700       <-- ..................................................
EV544617       <-- ..................................................
EY936081       <-- ..................................................
EY912628       <-- ..................................................
EY912792       <-- ..................................................
EY935229       <-- ..................................................
EX890874       <-- ..................................................
EY933797       <-- ..................................................
FD562912       --> CGGAGATAACAAGGAAGGGAACTACACCACTCCAAAAACAACTCATTCTA
EV537709       --> .....................ggACACCACTCCAAAAACAACTCATTCTA
EW716096       --> ......................gACACCACTCCAAAAACAACTCATTCTA
EW716416       --> .....................ggACACCACTCCAAAAACAACTCATTCTA
EY908664       --> .....................ggACACCACTCCAAAAACAACTCATTCTA
EY917045       --> .....................ggACACCACTCCAAAAACAACTCATTCTA
EV549067       --> ........................gACCACTCCAAAAACAACTCATTCTA
EW723571       --> .....................ggagACCACTCCAAAAACAACTCATTCTA
EX886504       --> .......................ggACCACTCCAAAAACAACTCATTCTA
EY937519       --> ....................ggcagACCACTCCAAAAACAACTCATTCTA
FD569243       --> .....................ggagACCACTCCAAAAACAACTCATTCTA
EY917244       --> ...............................ggAAAAACAACTCATTCTA
EY940303       --> .....................................ggAACTCATTCTA
EY939258       --> ..................................................
EW724219       --> ..................................................
FD542225       --> ..................................................

               101    -    151
UN20307        --> ATTTGATCCTTTTCGTTTGCAATGGATACCGAGTTTCTCCGCACCTTAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- ..................................................  Raphanus sativus var. oleiformis
EW728759       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW728818       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW720284       <-- ..................................................  Raphanus sativus var. oleiformis
FD573485       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV541887       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566700       <-- ..................................................  Raphanus sativus var. oleiformis
EY904332       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD942904       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW721700       <-- ..................................................  Raphanus sativus var. oleiformis
EV544617       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936081       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY912628       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912792       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935229       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX890874       <-- ..................................................  Raphanus sativus var. oleiformis
EY933797       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD562912       --> ATTTGATCCTCTTCGTTTGCAATGGATACCGAGTTTCTCCGCACCTTAGA  Raphanus sativus var. oleiformis
EV537709       --> ATTTGATCCTTTTCGTTTGCAATGGATACCGAGTTTCTCCGCACCTTAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW716096       --> ATTTGATCCTCTTCGTTTGCAATGGATACCGAGTTTCTCCGCACCTTAGA  Raphanus sativus var. oleiformis
EW716416       --> ATTTGATCCTCTTCGTTTGCAATGGATACCGAGTTTCTCCGCACCTTAGA  Raphanus sativus var. oleiformis
EY908664       --> ATTTGATCCTTTTCGTTTGCAATGGATACCGAGTTTCTCCGCACCTTAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY917045       --> ATTTGATCCTCTTCGTTTGCAATGGATACCGAGTTTCTCCGCACCTTAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549067       --> ATTTGATCCTCTTCGTTTGCAATGGATACCGAGTTTCTCCGCACCTTAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723571       --> ATTTGATCCTTTTCGTTTGCAATGGATACCGAGTTTCTCCGCACCTTAGA  Raphanus sativus cv Early Scarlet Globe
EX886504       --> ATTTGATCCTCTTCGTTTGCAATGGATACCGAGTTTCTCCGCACCTTAGA  Raphanus sativus var. oleiformis
EY937519       --> ATTTGATCCTTTTCGTTTGCAATGGATACCGAGTTTCTCCGCACCTTAGA  Raphanus sativus cv Early Scarlet Globe
FD569243       --> ATTTGATCCTTTTCGTTTGCAATGGATACCGAGTTTCTCCGCACCTTAGA  Raphanus sativus cv Early Scarlet Globe
EY917244       --> ATTTGATCCTCTTCGTTTGCAATGGATACCGAGTTTCTCCGCACCTTAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940303       --> ATTTGATCCTTTTCGTTTGCAATGGATACCGAGTTTCTCCGCACCTTAGA  Raphanus sativus cv Early Scarlet Globe
EY939258       --> ..........TTTCGTTTGCAATGGATACCGAGTTTCTCCGCACCTTAGA  Raphanus sativus cv Early Scarlet Globe
EW724219       --> ........................GATACCGAGTTTCTCCGCACCTTAGA  Raphanus sativus cv Early Scarlet Globe
FD542225       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               151    -    201
UN20307        --> TCGCCAGATTCTCTTGGGCGTCTTCGTCGCTTTCGTCGCCGTCAGTGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- ..................................................  Raphanus sativus var. oleiformis
EW728759       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW728818       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW720284       <-- ..................................................  Raphanus sativus var. oleiformis
FD573485       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV541887       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566700       <-- ..................................................  Raphanus sativus var. oleiformis
EY904332       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD942904       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW721700       <-- ..................................................  Raphanus sativus var. oleiformis
EV544617       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936081       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY912628       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912792       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935229       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX890874       <-- ..................................................  Raphanus sativus var. oleiformis
EY933797       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD562912       --> TCGCCAGATTCTCTTGGGCGTCTTCGTTGCTTTCGTCGCCGTCAGTGCCG  Raphanus sativus var. oleiformis
EV537709       --> TCGCCAGATTCTCTTGGGTGTCTTCATCGCTTTCGTCGCCGTCAGTGCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW716096       --> TCGCCAGATTCTCTTGGGCGTCTTCGTTGCTTTCGTCGCCGTCAGTGCCG  Raphanus sativus var. oleiformis
EW716416       --> TCGCCAGATTCTCTTGGGCGTCTTCGTTGCTTTCGTCGCCGTCAGTGCCG  Raphanus sativus var. oleiformis
EY908664       --> TCGCCAGATTCTCTTGGGTGTCTTCGTCGCTTTCGTCGCCGTCAGTGCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY917045       --> TCGCCAGATTCTCTTGGGCGTCTTCGTTGCTTTCGTCGCCGTCGGTGCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549067       --> TCGCCAGATTCTCTTGGGCGTCTTCGTTGCTTTCGTCGCCGTCAGTGCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723571       --> TCGCCAGATTCTCTTGGGCGTCTTCGTCGCTTTCGTCGCCGTCAGTGCCG  Raphanus sativus cv Early Scarlet Globe
EX886504       --> TCGCCAGATTCTCTTGGGCGTCTTCGTTGCTTTCGTCGCCGTCAGTGCCG  Raphanus sativus var. oleiformis
EY937519       --> TCGCCAGATTCTCTTGGGCGTCTTCGTCGCTTTCGTCGCCGTCAGTGCCG  Raphanus sativus cv Early Scarlet Globe
FD569243       --> TCGCCAGATTCTCTTGGGCGTCTTCGTCGCTTTCGTCGCCGTCAGTGCCG  Raphanus sativus cv Early Scarlet Globe
EY917244       --> TCGCCAGATTCTCTTGGGCGTCTTCGTTGCTTTCGTCGCCGTCAGTGCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940303       --> TCGCCAGATTCTCTTGGGCGTCTTCGTCGCTTTCGTCGCCGTCAGTGCCG  Raphanus sativus cv Early Scarlet Globe
EY939258       --> TCGCCAGATTCTCTTGGGCGTCTTCGTCGCTTTCGTCGCCGTCAGTGCCG  Raphanus sativus cv Early Scarlet Globe
EW724219       --> TCGCCAGATTCTCTTGGGCGTCTTCGTCGCTTTCGTCGCCGTCAGTGCCG  Raphanus sativus cv Early Scarlet Globe
FD542225       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               201    -    251
UN20307        --> GTGCTGCTTTTTATCTCTCCTCCTCCAAGAAACGCAGAGGGTGTTTGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- ..................................................  Raphanus sativus var. oleiformis
EW728759       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW728818       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW720284       <-- ..................................................  Raphanus sativus var. oleiformis
FD573485       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV541887       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566700       <-- ..................................................  Raphanus sativus var. oleiformis
EY904332       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD942904       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW721700       <-- ..................................................  Raphanus sativus var. oleiformis
EV544617       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936081       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY912628       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912792       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935229       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX890874       <-- ..................................................  Raphanus sativus var. oleiformis
EY933797       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD562912       --> GTGCTGCTTTTTATCTCTCCTCCTCCAAGAAACGCAGAGGGTGTTTGGAT  Raphanus sativus var. oleiformis
EV537709       --> GTGCTGCTTTT-ATCTCTCCTCCTCCAAGAAACGCAGAGGGTGTTTAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW716096       --> GTGCTGCTTTTTATCTCTCCTCCTCCAAGAAACGCAGAGGGTGGTTGGAT  Raphanus sativus var. oleiformis
EW716416       --> GTGCTGCTTTTTATCTCTCCTCCTCCAAGAAACGCAGAGGGTGTTTGGAT  Raphanus sativus var. oleiformis
EY908664       --> GTGCTGCTTTTTATCTCTCCTCCTCCAAGAAACGCAGAGGGTGTTTAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY917045       --> GTGCTGCTTTTTATCTCTCCTCCTCCAAGAAACGCAGAGGGTGTTTGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549067       --> GTGCTGCTTTTTATCTCTCCTCCTCCAAGAAACGCAGAGGGTGTTTGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723571       --> GTGCTGCTTATTATCTCTCCTCCTCCAAGAAACGCAGAGGGTGTTTGGAT  Raphanus sativus cv Early Scarlet Globe
EX886504       --> GTGCTGCTTTTTATCTCTCCTCCTCCAAGAAACGCAGAGGGTGTTTGGAT  Raphanus sativus var. oleiformis
EY937519       --> GTGCTGCTTATTATCTCTCCTCCTCCAAGAAACGCAGAGGGTGTTTGGAT  Raphanus sativus cv Early Scarlet Globe
FD569243       --> GTGCTGCTTATTATCTCTCCTCCTCCAAGAAACGCAGAGGGTGTTTGGAT  Raphanus sativus cv Early Scarlet Globe
EY917244       --> GTGCTGCTTTTTATCTCTCCTCCTCCAAGAAACGCAGAGGGTGTTTGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940303       --> GTGCTGCTTATTATCTCTCCTCCTCCAAGAAACGCAGAGGGTGTTTGGAT  Raphanus sativus cv Early Scarlet Globe
EY939258       --> GTGCTGCTTATTATCTCTCCTCCTCCAAGAAACGCAGAGGGTGTTTGGAT  Raphanus sativus cv Early Scarlet Globe
EW724219       --> GTGCTGCTTATTATCTCTCCTCCTCCAAGAAACGCAGAGGGTGTTTGGAT  Raphanus sativus cv Early Scarlet Globe
FD542225       --> .......TTTTTATCTCTCCTCCTCCAAGAAACGCAGAGGGTGTTTAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)

               251    -    301
UN20307        --> CCAGAGAATTTCAAAGAGTTCAAGCTTGTTAAGAAGCAGCAACTCAGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- ....................................CAGCAACTCAGTCA  Raphanus sativus var. oleiformis
EW728759       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW728818       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW720284       <-- ..................................................  Raphanus sativus var. oleiformis
FD573485       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV541887       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566700       <-- ..................................................  Raphanus sativus var. oleiformis
EY904332       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD942904       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW721700       <-- ..................................................  Raphanus sativus var. oleiformis
EV544617       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936081       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY912628       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912792       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935229       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX890874       <-- ..................................................  Raphanus sativus var. oleiformis
EY933797       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD562912       --> CCAGAGAATTTCAAAGAGTTCAAGCTTGTTAAGAAGCAGCAACTCAGTCA  Raphanus sativus var. oleiformis
EV537709       --> CCAGAGAGTTTCAAGGAGTTCAAGCTTGTTAAGAAGCAGCAACTCAGTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW716096       --> CCAGAGAATTTCAAAGAGTTCAAGCTTGTTAAGAAGCAGCAACTCAGTCA  Raphanus sativus var. oleiformis
EW716416       --> CCAGAGAATTTCAAGGAGTTCAAGCTTGTTAAGAAGCAGCAACTCAGTCA  Raphanus sativus var. oleiformis
EY908664       --> CCAGAGAGTTTCAAGGAGTTCAAGCTTGTTAAGAAGCAGCAACTCAGTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY917045       --> CCAGAGAATTTCAAAGAGTTCAAGCTTGTTAAGAAGCAGCAACTCAGTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549067       --> CCAGAGAATTTCAAAGAGTTCAAGCTTGTTAAGAAGCAGCAACTCAGTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723571       --> CCAGAGAATTTCAAAGAGTTCAAGCTTGTTAAGAAGCAGCAACTCAGTCA  Raphanus sativus cv Early Scarlet Globe
EX886504       --> CCAGAGAATTTCAAAGAGTTCAAGCTTGTTAAGAAGCAGCAACTCAGTCA  Raphanus sativus var. oleiformis
EY937519       --> CCAGAGAATTTCAAAGAGTTCAAGCTTGTTAAGAAGCAGCAACTCAGTCA  Raphanus sativus cv Early Scarlet Globe
FD569243       --> CCAGAGAATTTCAAAGAGTTCAAGCTTGTTAAGAAGCAGCAACTCAGTCA  Raphanus sativus cv Early Scarlet Globe
EY917244       --> CCAGAGAATTTCAAAGAGTTCAAGCTTGTTAAGAAGCAGCAACTCAGTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940303       --> CCAGAGAATTTCAAAGAGTTCAAGCTTGTTAAGAAGCAGCAACTCAGTCA  Raphanus sativus cv Early Scarlet Globe
EY939258       --> CCAGAGAATTTCAAAGAGTTCAAGCTTGTTAAGAAGCAGCAACTCAGTCA  Raphanus sativus cv Early Scarlet Globe
EW724219       --> CCAGAGAATTTCAAAGAGTTCAAGCTTGTTAAGAAGCAGCAACTCAGTCA  Raphanus sativus cv Early Scarlet Globe
FD542225       --> CCAGGGAGTTTCAAGGAGTTCAAGCTTGTTAAGAAGCAGCAACTCAGTCA  Raphanus raphanistrum subsp. raphanistrum (MS)

               301    -    351
UN20307        --> CAATGTCGCCAAATTCGTTTTTGAACTCCCTTCTTCTACTGCTGTCTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- CAATGTCGCCAAATTCGTTTTTGAACTCC-TT-TTCTGCTGCTGTCTTGG  Raphanus sativus var. oleiformis
EW728759       <-- .................................TTCTACTGCTGTCTTGG  Raphanus sativus cv Early Scarlet Globe
EW728818       <-- .................................TTCTACTGCTGTCTTGG  Raphanus sativus cv Early Scarlet Globe
EW720284       <-- .....................................gCTGCTGTCTTGG  Raphanus sativus var. oleiformis
FD573485       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV541887       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566700       <-- ..................................................  Raphanus sativus var. oleiformis
EY904332       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD942904       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW721700       <-- ..................................................  Raphanus sativus var. oleiformis
EV544617       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936081       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY912628       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912792       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935229       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX890874       <-- ..................................................  Raphanus sativus var. oleiformis
EY933797       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD562912       --> CAATGTCGCCAAATTCGTTTTTGAACTCCCTTCTTCTGCTGCTGTCTTGG  Raphanus sativus var. oleiformis
EV537709       --> CAATGTCGCCAAATTCGTTTTTGAACTCCCTTCTTCTACTGCTGTCTTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW716096       --> CAATGTCGCCAAATTCGTTTTTGAACTCCCTTCTTCTGCTGCTGTCTTGG  Raphanus sativus var. oleiformis
EW716416       --> CAATGTCGCCAAATTCGTTTTTGAACTCCCTTCTTCTGCTGCTGTCTTGG  Raphanus sativus var. oleiformis
EY908664       --> CAATGTCGCCAAATTCGTTTTTGAACTCCCTTCTTCTACTGCTGTCTTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY917045       --> CAATGTCGCCAAATTCGTTTTTGAACTCCCTTCTTCTGCTGCTGTCTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549067       --> CAATGTCGCCAAATTCGTTTTTGAACTCCCTTCTTCTGCTGCTGTCTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723571       --> CAATGTCGCCAAATTCGTTTTTGAACTCCCTTCTTCTACTGCTGTCTTGG  Raphanus sativus cv Early Scarlet Globe
EX886504       --> CAATGTCGCCAAATTCGTTTTTGAACTCCCTTCTTCTGCTGCTGTCTTGG  Raphanus sativus var. oleiformis
EY937519       --> CAATGTCGCCAAATTCGTTTTTGAACTCCCTTCTTCTACTGCTGTCTTGG  Raphanus sativus cv Early Scarlet Globe
FD569243       --> CAATGTCGCCAAATTCGTTTTTGAACTCCCTTCTTCTACTGCTGTCTTGG  Raphanus sativus cv Early Scarlet Globe
EY917244       --> CAATGTCGCCAAATTCGTTTTTGAACTCCCTTCTTCTGCTTCTGTCTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY940303       --> CAATGTCGCCAAATTCGTTTTTGAACTCCCTTCTTCTACTGCTGTCTTGG  Raphanus sativus cv Early Scarlet Globe
EY939258       --> CAATGTCGCCAAATTCGTTTTTGAACTCCCTTCTTCTACTGCTGTCTTGG  Raphanus sativus cv Early Scarlet Globe
EW724219       --> CAATGTCGCCAAATTCGTTTTTGAACTCCCTTCTTCTACTGCTGTCTTGG  Raphanus sativus cv Early Scarlet Globe
FD542225       --> CAATGTCGCCAAATTCGTTTTTGAACTCCCTTCTTCTACTGCTGTCTTGG  Raphanus raphanistrum subsp. raphanistrum (MS)

               351    -    401
UN20307        --> GTCTTCCCATTGGACAACACATCAGTTGCAGGGGAAAGGATGCTCAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- GTCTTCCCATTGGACAACACATCAGTTGCAGGGGAAAGGATGCTCAAGGA
EW728759       <-- GTCTTCCCATTGGACAACACATCAGTTGCAGGGGAAAGGATGCTCAAGGA
EW728818       <-- GTCTTCCCATTGGACAACACATCAGTTGCAGGGGAAAGGATGCTCAAGGA
EW720284       <-- GTCTTCCCATTGGACAACACATCAGTTGCAGGGGAAAGGATGCTCAAGGA
FD573485       <-- ..CTTCCCATTGGACAACACATCAGTTGCAGGGGAAAGGATGCTCAAGGA
EV541887       <-- ..................................................
FD566700       <-- ..................................................
EY904332       <-- ..................................................
FD942904       <-- ..................................................
EW721700       <-- ..................................................
EV544617       <-- ..................................................
EY936081       <-- ..................................................
EY912628       <-- ..................................................
EY912792       <-- ..................................................
EY935229       <-- ..................................................
EX890874       <-- ..................................................
EY933797       <-- ..................................................
FD562912       --> GTCTTCCCATTGGACAACACATCAGTTGCAGGGGAAAGGATGCTCAAGGA
EV537709       --> GTCTTCCCATTGGACAACACATCAGTTGCAGGGGAAAGGATGCTCAAGGA
EW716096       --> GTCTTCCCATTGGACAACACATCAGTTGCAGGGGAAAGGATGCTCAAGGA
EW716416       --> GTCTTCCCATTGGACAACACATCAGTTGCAGGGGAAAGGATGCTCAAGGA
EY908664       --> GTCTTCCCATTGGACAACACATCAGTTGCAGGGGAAAGGATGCTCAAGGA
EY917045       --> GTCTTCCCATTGGACAACACATCAGTCGCATGGGAAAGGATGCTCAAGGA
EV549067       --> GTCTTCCCATTGGACAACACATCAGTTGCAGGGGAAAGGATGCTCAAGGA
EW723571       --> GTCTTCCCATTGGACAACACATCAGTTGCAGGGGAAAGGATGCTCAAGGA
EX886504       --> GTCTTCCCATTGGACAACACATCAGTTGCAGGGGAAAGGATGCTCAAGGA
EY937519       --> GTCTTCCCATTGGACAACACATCAGTTGCAGGGGAAAGGATGCTCAAGGA
FD569243       --> GTCTTCCCATTGGACAACACATCAGTTGCAGGGGAAAGGATGCTCAAGGA
EY917244       --> GTCTTCCCATTGGACAACACATCAGTTGCAGGGGAAAGGATGCTCAAGGA
EY940303       --> GTCTTCCCATTGGACAACACATCAGTTGCAGGGGAAAGGATGCTCAAGGA
EY939258       --> GTCTTCCCATTGGACAACACATCAGTTGCAGGGGAAAGGATGCTCAAGGA
EW724219       --> GTCTTCCCATTGGACAACACATCAGTTGCAGGGGAAAGGATGCTCAAGGA
FD542225       --> GTCTTCCCATTGGACAACACATCA-TTGCAGGGGAAAG............

               401    -    451
UN20307        --> GAGGATGTTATTAAGCCTTACACTCCC-ACAACGTTAGATTCAGATCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- GAGGATGTTATTAAGCCTTACACTCCCCACAACGTTAGATTCAGATCTTG
EW728759       <-- GAGGATGTTATTAAGCCTTACACTCCC-ACAACGTTAGATTCAGATCTTG
EW728818       <-- GATGATGTTATTAAGCCTTACACTCCCCACAACGTTAGATTCAGATCTTG
EW720284       <-- GAGGATGTTATTAAGCCTTACACTCCC-ACAACGTTAGATTCAGATCTTG
FD573485       <-- GAGGATGTTATTAAGCCTTACACTCCC-ACAACGTTAGATTCAGATCTTG
EV541887       <-- GAGGATGTTATTAAGCCTTACACTCCCCACAACGTTAGATTCTGATCTTG
FD566700       <-- ...........TAAGC-TTACACTCCC-ACAACGTTAGATTCAGATCTTG
EY904332       <-- ..................TACACTCCC-ACAACGTTAGATTCTGATCTTG
FD942904       <-- .............................CAACGTTAGATTCAGATCTTG
EW721700       <-- ...................................TAGATTCAGATCTTG
EV544617       <-- ..................................................
EY936081       <-- ..................................................
EY912628       <-- ..................................................
EY912792       <-- ..................................................
EY935229       <-- ..................................................
EX890874       <-- ..................................................
EY933797       <-- ..................................................
FD562912       --> GAGGATGTTATTAAGCCTTACACTCCC-ACAACGTTAGATTCAGATCTTG
EV537709       --> GAGGATGTTATTAAGCCTTACACTCCC-ACAACGTTAGATTCTGATCTTG
EW716096       --> GAGGATGTTATTAAGCCTTACACTCCC-ACAACGTTAGATTCAGATCTTG
EW716416       --> GAGGATGTTATTAAGCCTTACACTCCC-ACAACGTTAGATTCAGATCTTG
EY908664       --> GAGGATGTTATTAAGCCTTACACTCCC-ACAACGTTAGATTCTGATCTTG
EY917045       --> GAGGATGTTATTAAGCCTTACACTCCC-ACAACGTTAGATTCAGATCTTG
EV549067       --> GAGGATGTTATTAAGCCTTACACTCCC-ACAACGTTAGATTCAGATCTTG
EW723571       --> GAGGATGTTATTAAGCCTTACACTCCC-ACAACGTTAGATTCAGATCTTG
EX886504       --> GAGGATGTTATTAAGCCTTACACTCCC-ACAACGTTAGATTCAGATCTTG
EY937519       --> GAGGATGTTATTAAGCCTTACACTCCC-ACAACGTTAGATTCAGATCTTG
FD569243       --> GAGGATGTTATTAAGCCTTACACTCCC-ACAACGTTAGATTCAGATCTTG
EY917244       --> GAGGATGTTATTAAGCCTTACACTCCC-ACAACGTTAGATTCAGATCTTG
EY940303       --> GAGGATGTTATTAAGCCTTACACTCCC-ACAACGTTAGATTCAGATCTTG
EY939258       --> GAGGATGTTATTAAGCCTTACACTCCC-ACAACGTTAGATTCAGATCTTG
EW724219       --> GATGATGTTATTAAGCCTTACACTCCC-ACAACGTTAGATTCA.......
FD542225       --> ..................................................

               451    -    501
UN20307        --> GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGGAAGGATGTCTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGGAAGGATGTCTCAT
EW728759       <-- GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGGAAGGATGTCTCAT
EW728818       <-- GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGGAAGGATGTCTCAT
EW720284       <-- GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGGAAGGATGTCTCAT
FD573485       <-- GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGGAAGGATGTCTCAT
EV541887       <-- GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGGAAGGATGTCTCAT
FD566700       <-- GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGGAAGGATGTCTCAT
EY904332       <-- GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGGAAGGATGTCTCAT
FD942904       <-- GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGGAAGGATGTCTCAT
EW721700       <-- GACGCTT-GAGCTTGTCATTAAGATGTATCCACAAGTAAGGATGTCTCAT
EV544617       <-- ..........................TATCCACAAGGAAGGATGTCTCAT
EY936081       <-- ...........................................GTCTCAT
EY912628       <-- ..................................................
EY912792       <-- ..................................................
EY935229       <-- ..................................................
EX890874       <-- ..................................................
EY933797       <-- ..................................................
FD562912       --> GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGGAAGGATGTCTCAT
EV537709       --> GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGGAAGGATGTCTCAT
EW716096       --> GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGGAAGGATGTCTCAT
EW716416       --> GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGTAAGGATGTCTCAT
EY908664       --> GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGGAAGGATGTCTCAT
EY917045       --> GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGGAAGGATGTCTCAT
EV549067       --> GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGGAAGGATGTCTCAT
EW723571       --> GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGGAAGGATGTCTCAT
EX886504       --> GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGGAAGGATGTCTCAT
EY937519       --> GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGGAAGGATGTCTCAT
FD569243       --> GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGGAAGGATGTCTCAT
EY917244       --> GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGGAAGGATGTCTCAT
EY940303       --> GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGGAAGGATGTCTCAT
EY939258       --> GACGCTTTGAGCTTGTCATTAAGATGTATCCACAAGGAAGGATGTCTCAT
EW724219       --> ..................................................
FD542225       --> ..................................................

               501    -    551
UN20307        --> CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCGAA
EW728759       <-- CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
EW728818       <-- CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
EW720284       <-- CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTTAAAGGACCAAA
FD573485       <-- CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
EV541887       <-- CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
FD566700       <-- CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
EY904332       <-- CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
FD942904       <-- CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
EW721700       <-- CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
EV544617       <-- CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
EY936081       <-- CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
EY912628       <-- CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
EY912792       <-- .....CAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
EY935229       <-- ..................................................
EX890874       <-- ..................................................
EY933797       <-- ..................................................
FD562912       --> CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
EV537709       --> CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
EW716096       --> CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCGAA
EW716416       --> CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
EY908664       --> CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
EY917045       --> CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
EV549067       --> CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
EW723571       --> CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
EX886504       --> CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
EY937519       --> CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
FD569243       --> CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
EY917244       --> CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
EY940303       --> CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
EY939258       --> CATTTCAGGGAGATGCGTGTTGGAGACCATCTTGCTGTAAAAGGACCAAA
EW724219       --> ..................................................
FD542225       --> ..................................................

               551    -    601
UN20307        --> GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
EW728759       <-- GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
EW728818       <-- GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
EW720284       <-- GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
FD573485       <-- GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
EV541887       <-- GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
FD566700       <-- GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
EY904332       <-- GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
FD942904       <-- GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
EW721700       <-- GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
EV544617       <-- GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
EY936081       <-- GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
EY912628       <-- GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
EY912792       <-- GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
EY935229       <-- ..................................................
EX890874       <-- ..................................................
EY933797       <-- ..................................................
FD562912       --> GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
EV537709       --> GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
EW716096       --> GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
EW716416       --> GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
EY908664       --> GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGA.......
EY917045       --> GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
EV549067       --> GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
EW723571       --> GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
EX886504       --> GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
EY937519       --> GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
FD569243       --> GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
EY917244       --> GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
EY940303       --> GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
EY939258       --> GGGGAGGTTCAAGTATCAGCCAGGTCAGTTTAGGGCATTTGGAATGCTTG
EW724219       --> ..................................................
FD542225       --> ..................................................

               601    -    651
UN20307        --> CTGGAGGTTCAGGCATCACTCCCATGTTCCAAGTTGCAAGAGCGATTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- CTGGAGGTTCAGGCACCACTCCCATGTTCCAAGTTGCAAGAGCGATTCTT
EW728759       <-- CTGGAGGTTCAGGCATCACTCCCATGTTCCAAGTTGCAAGAGCGATTCTT
EW728818       <-- CTGGAGGTTCAGGCATCACTCCCATGTTCCAAGTTGCAAGAGCGATTCTT
EW720284       <-- CTGGAGGTTCAGGCATCACTCCCATGTTCCAAGTTGCAAGAGCGATTCTT
FD573485       <-- CTGGAGGTTCAGGCATCACTCCCATGTTCCAAGTTGCAAGAGCGATTCTT
EV541887       <-- CTGGAGGTTCAGGCATCACTCCCATGTTTCAAGTTGCAAGAGCGATTCTT
FD566700       <-- CTGGAGGTTCAGGCATCACTCCCATGTTCCAAGTTGCAAGAGCGATTCTT
EY904332       <-- CTGGAGGTTCAGGCATCACTCCCATGTTTCAAGTTGCAAGAGCGATTCTT
FD942904       <-- CTGGAGGTTCAGGCATCACTCCCATGTTCCAAGTTGCAAGAGCGATTCTT
EW721700       <-- CTGGAGGTTCAGGCATCACTCCCATGTTCCAAGTTGCAAGAGCGATTCTT
EV544617       <-- CTGGAGGTTCAGACATCACTCCCATGTTCCAAGTTGCAAGAGCGATTCTT
EY936081       <-- CTGGAGGTTCAGGCATCACTCCCATGTTCCAAGTTGCAAGAGCGAT--TT
EY912628       <-- CTGGAGGTTCAGGCATCACTCCCATGTTCCAAGTTGCAAGAGCGATTCTT
EY912792       <-- CTGGAGGTTCAAGCATCACTCCCATGTTCCAAGTTGCAAGAGCGATTCTT
EY935229       <-- ..............................................TCTT
EX890874       <-- ..................................................
EY933797       <-- ..................................................
FD562912       --> CTGG..............................................
EV537709       --> CTGGAGGTTCAGGCATCACTCCCATGTTTCAAGTTGCAAGAGCGATTCTT
EW716096       --> CTGGAGGTTCAGGCACCACTCCCATGTTCCAAGTTGCAAGAGCGATTCTT
EW716416       --> CTGGAGGTTCAGGCATCACTCCCATGTTCCAAGTTGCAAGAGCGATTCTT
EY908664       --> ..................................................
EY917045       --> CTGGAGGTTCAGGCATCACTCCCATGTTCCAAGTTGCAAGAGCGATTCTT
EV549067       --> CTGGAGGTTCAGACATCACTCCCATGTTCCAAGTTGCAAGAGCGATTCTT
EW723571       --> CTGGAGGTTCAGGCATCACTCCCATGTTCCAAGTTGCAAGAGCGATTCTT
EX886504       --> CTGGAGGTTCAGGCATCACTCCCATGTTCCAAGTTGCAAGAGCGATTCTT
EY937519       --> CTGGAGGTTCAGGCATCACTCCCATGTTCCAAGTTGCAAGAGCGATTCTT
FD569243       --> CTGG..............................................
EY917244       --> CTGGAGGTTCAAGCATCACTCCCATGTTCCAAGTTGCAAGAGCGATTCTT
EY940303       --> CTGGAGGTTCAGGCATCACTCCCATGTTCCAAGTTGCAAGAGCGATT--T
EY939258       --> CTGGAGGTTCAGGCATCACTCCCATGTTCCAAGTTGCAAGAGCGATTCTT
EW724219       --> ..................................................
FD542225       --> ..................................................

               651    -    701
UN20307        --> GAAAACCCAACAGACAAGACAAAGGTGCATCTCATTTATGCCAATGTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- GAAAACCCAACAGACAAGACAAAGGTGCATTTCATTTATGCCAATGTCAC
EW728759       <-- GAAAACCCAACAGACAAGACAAAGGTGCATCTCATTTATGCCAATGTCAC
EW728818       <-- GAAAACCCAACAGACAAGACAAAGGTGCATCTCATTTATGCCAATGTCAC
EW720284       <-- GAAAACCCAACAGACAAGACAAAGGTGCATTTCATTTATGCCAATGTCAC
FD573485       <-- GAAAACCCAACAGACAAGACAAAGGTGCATCTCATTTATGCCAATGTCAC
EV541887       <-- GAAAACCCAACAGACAAGACAAAGGTGCATCTCATTTATGCCAATGTCAC
FD566700       <-- GAAAACCCAACAGACAAGACAAAGGTGCATCTCATTTATGCCAATGTCAC
EY904332       <-- GAAAACCCAACAGACAAGACAAAGGTGCATCTCATTTATGCCAATGTCAC
FD942904       <-- GAAAACCCAACAGACAAGACAAAGGTGCATCTCATTTATGCCAATGTCAC
EW721700       <-- GAAAACCCAACAGACAAGACAAAGGTGCATCTCATTTATGCCAATGTCAC
EV544617       <-- GAAAACCCAACAGACAAGACAAAGGTGCATCTCATTTATGCCAATGTCAC
EY936081       <-- GAAAACCCAACAGACAAGACAAAGGTGCATCTCATTTATGCCAATGTCAC
EY912628       <-- GAAAACCCAACAGACAAGACAAAGGTGCATTTCATTTATGCCAATGTCAC
EY912792       <-- GAAAACCCAACAGACAAGACAAAGGTGCATCTCATTTATGCCAATGTCAC
EY935229       <-- GAAAACCCAACAGACAAGACAAAGGTGCATCTCATTTATGCCAATGTCAC
EX890874       <-- ..........................GCATTTCATTTATGCCAATGTCAC
EY933797       <-- ..................................................
FD562912       --> ..................................................
EV537709       --> GAAAACCCAACAGACAAGACAAAGGTGCATCTCATTTATGCCAATGTCAC
EW716096       --> GAAAACCCAACAGACAAGACAAAGGTGCATCTCATTTATGCCAATGTCAC
EW716416       --> GAAAACCCAACAGACAAGACAAAGGTGCATCTCATTTATGCCAATGTCAC
EY908664       --> ..................................................
EY917045       --> GAAAACCCAACAGACAAGACAAAGGTGCATCTCATTTATGCCAATGTCAC
EV549067       --> GAAAACCCAACAGACAAGACAAAGGTGCATCTCATTTATGCCAATGTCAC
EW723571       --> GAAAACCCAACAGACAAGACAAAGGTGCATCTCATTTATGCCAATGTCAC
EX886504       --> GAAAACCCAACAGACAAGAC..............................
EY937519       --> GAAAACCCAACAGACAAGACAAAGGTGCATCTCATTTATGCCAATGTCAC
FD569243       --> ..................................................
EY917244       --> GAAAACCCAACAGACAAGACAAAGGTGCATCTCATTTATGCCAATGTCAC
EY940303       --> GAAAACCCAACAGACAAGACAAAGGTGCATCTCATTTATGCCAATGTCAC
EY939258       --> GAAAACCCAACAGACAAGACAAAGGTGCATCTCATTTATGCCAATGTCAC
EW724219       --> ..................................................
FD542225       --> ..................................................

               701    -    751
UN20307        --> ATACGAAGACATTCTCTTAA-GGGAAGAATTGGAGAGTCTTACAGCCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- ATACGAAGACATTCTCTTAA-GGGAAGAATTGGAGAGTCTTACAGCCAAT
EW728759       <-- ATACGAAGACATTCTCTTAA-GGGAAGAATTGGAGAGTCTTACAGCCAAT
EW728818       <-- ATACGAAGACATTTTCTTAA-GGGAAGAATTGGAGAGTCTTACAGCCAAT
EW720284       <-- ATACGAAGACATTTTTTTAA-GGGAAGAATTGGAGAGTTTTACAGCCAAT
FD573485       <-- ATACGAAGACATTTTCTTAA-GGGAAGAATTGGAGAGTCTTACAGCCAAT
EV541887       <-- ATACGAAGACATTTTCTTAA-GGGAAGAATTGGAGAGTCTTACCGCCAAT
FD566700       <-- ATACGAAGACATTCTCTTAA-GGGAAGAATTGGAGAGTCTTACAGCCAAT
EY904332       <-- ATACGAAGACATTCTCTTAA-GGGAAGAATTGGAGAGTCTTACCGCCAAT
FD942904       <-- ATACGAAGACATTCTCTTAA-GGGAAGAATTGGAGAGTCTTACAGCCAAT
EW721700       <-- ATACGAAGACATTCTCTTAA-GGGAAGAATTGGAGAGTCTTACAGCCAAT
EV544617       <-- ATAGGAAGACATTTTCTTAA-GGGAAGAATTGGAGAGTCTTACAGCCAAT
EY936081       <-- ATACGAAGACATTCTCTTAA-GGGAAGAATTGGAGAGTCTTACAGCCAAT
EY912628       <-- ATACGAAGACATTTTCTTAA-GGGAAGAATTGGAGAGTCTTACAGCCAAT
EY912792       <-- ATACGAAGACATTCTCTTAA-GGGAAGAATTGGAGAGTCTTACAGCCAAT
EY935229       <-- ATACGAAGACATTCTCTTAA-GGGAAGAATTGGAGAGCCTTACAGCCAAT
EX890874       <-- ATAGGAAGACATTTTCTTAA-GGGAAGAATTGGAGAGTCTTACAGCCAAT
EY933797       <-- ..................................................
FD562912       --> ..................................................
EV537709       --> ATACGAAGACATTCTCTTAAAGGGAAGAATTGGAGAGTCTTACCGCCAAT
EW716096       --> ATACGAAGACATTCTCTTAA-GGGAAGAATTGGAGAGTCTTACAGCCAAT
EW716416       --> ATACGAAGACATTCTCTTAA-GGGA-GAATTGGAGAGTCTTACAGCCAAT
EY908664       --> ..................................................
EY917045       --> ATACGAAGACATTCTCTTAA-GGGAAGAATTGGAGAGTCTTACAGCCAAT
EV549067       --> ATACGAAGACATTCTCTTAA-GGGAAGAATTGGAGAGTCTTACAGCCAAT
EW723571       --> ATACGAAGACATTCTCTTAA-GGGAAGAATTGGAGAGTCTTACAGCCAAT
EX886504       --> ..................................................
EY937519       --> ATACGAAGACATTCTCTTAA-GGGAAGA......................
FD569243       --> ..................................................
EY917244       --> ATACGAAGACATTCTCTTAA-GGGAAGAATTGGAGAGTCTTACAGCCAAT
EY940303       --> ATACGAAGACATTCTCTTAA-GGGA.........................
EY939258       --> ATACGAAGACATTCTCTTAA-GGGAAGAATTGGAGAGCCTTACAGCCAAT
EW724219       --> ..................................................
FD542225       --> ..................................................

               751    -    801
UN20307        --> TACCCAGATCAATTCAAAATCTACTATGTTTTGAACCAGCCTCCGGAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- TACCCAGATCAATTCAAAATCTACTATGTTTTGAACCAGCCTCCGGAGAC
EW728759       <-- TACCCAGATCAATTCAAAATTTACTATGTTTTGAACCAGCCTCCGGAGAC
EW728818       <-- TACCCAGATCAATTCAAAATCTACTATGTTTTGAACCAGCCTCCGGAGAC
EW720284       <-- TACCCAGATCAATTCAAAATTTACTATGTTTTGAACCAGCCTCCGGAGAC
FD573485       <-- TACCCAGATCAATTCAAAATTTACTATGTTTTGAACCAGTCTCCGGAGAC
EV541887       <-- TACCCAGATCAATTCAAAATCTACTATGTTTTGAACCAGCCCCCGGAGAC
FD566700       <-- TACCCAGATCAATTCAAAATTTACTATGTTTTGAACCAGCCTCCGGAGAC
EY904332       <-- TACCCAGATCAATTCAAAATCTACTATGTTTTGAACCAGCCCCCGGAGAC
FD942904       <-- TACCCAGATCAATTCAAAATCTACTATGTTTTGAACCAGCCTCCGGAGAC
EW721700       <-- TACCCAGATCAATTCAAAATCTACTATGTTTTGAACCAGCCTCCGGAGAC
EV544617       <-- TACCCAGATCAATTCAAAATTTACTATGTTTTGAACCAGCCTCCGGAGAC
EY936081       <-- TACCCAGATCAATTCAAAATCTACTATGTTTTGAACCAGCCTCCGGAGAC
EY912628       <-- TACCCAGATCAATTCAAAATTTACTATGTTTTGAACCAGCCTCCGGAGAC
EY912792       <-- TACCCAGATCAATTCAAAATTTACTATGTTTTGAACCAGCCTCCGGAGAC
EY935229       <-- TACCCAGATCAATTCAAAATTTACTATGTTTTGAACCAGCCTCCGGAGAC
EX890874       <-- TACCCAGATCAATTCAAAATTTACTATGTTTTGAACCAGCCTCCGGAGAC
EY933797       <-- ..................................................
FD562912       --> ..................................................
EV537709       --> TACCCAGATCAATTCAAAATCTACTATGTTTTGAAC..............
EW716096       --> TACCCAGATCAATTCAAAATCTACTATGTTTTGAACCAGCCTCCGGAGAC
EW716416       --> TACCCAGATCAATTCAAA-TCTACTATGTTTTGA-CCAGCCTCCGGAGAC
EY908664       --> ..................................................
EY917045       --> TACCCAGATCAATTCAAAATCTACTATGTTT-GAACCAGCCTCCGGAGAC
EV549067       --> TACCCAGATCAATTCAAAATCTACTATGTTTTGAACCAGCCTCCGGAGAC
EW723571       --> TACCCAGATCAATTCAAAATCTACTATGTTTTGAACCAGCCTCCGGAGAC
EX886504       --> ..................................................
EY937519       --> ..................................................
FD569243       --> ..................................................
EY917244       --> TACCCAGATCAATTCAAA-TCTACTATGTTT-GA-CCAGC-TC--GAGAC
EY940303       --> ..................................................
EY939258       --> TACCCAGATCAATTCAAA-TCTACTATGTTTgaac...............
EW724219       --> ..................................................
FD542225       --> ..................................................

               801    -    851
UN20307        --> ATGGGATGGTGGTGTTGGATTTGTATCAAAGGAAATGATCCAGGCTCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- ATGGGATGGTGGTGTTGGATTTGTATCAAAGGAAATGATCCAGGCTCATT
EW728759       <-- ATGGGATGGTGGTGTTGGATTTGTACCAAAGGAAATGATCCAGGCTCATT
EW728818       <-- ATGGGATGGTGGTGTTGGATTTGTATCAAAGGAAATGATCCAGGCTCATT
EW720284       <-- ATGGGATGGTGGTGTTGGATTTTTATCAAAGGAAATGATCCAGGCTCATT
FD573485       <-- ATGGGATGGTGGTGTTGGATTTGTATCAAAGGAAATGATCCAGGCTCATT
EV541887       <-- ATGGGATGGTGGTGTTGGATTTGTATCAAAGGAAATGATCCAGGCTCATT
FD566700       <-- ATGGGATGGTGGTGTTGGATTTGTATCAAAGGAAATGATCCAGGCTCATT
EY904332       <-- ATGGGATGGTGGTGTTGGATTTGTATCAAAGGAAATGATCCAGGCTCATT
FD942904       <-- ATGGGATGGTGGTGTTGTATTTGTATCAAAGGAAATGATCCAGGCTCATT
EW721700       <-- ATGGGATGGTGGTGTTGGATTTGTATCAAAGGAAATGATCCAGGCTCATT
EV544617       <-- ATGGGATGGTGGTGTTGGATTTGTATCAAAGGAAATGATCCAGGCTCATT
EY936081       <-- ATGGGATGGTGGTGTTGGATTTGTATCAAAGGAAATGATCCAGGCTCATT
EY912628       <-- ATGGGATGGTGGTGTTGGATTTGTATCAAAGGAAATGATCCAGGCTCATT
EY912792       <-- ATGGGATGGTGGTGTTGGATTTGTATCAAAGGAAATGATCCAGGCTCATT
EY935229       <-- ATGGGATGGTGGTGTTGGATTTGTATCAAAGGAAATGATCCAGGCTCATT
EX890874       <-- ATGGGATGGTGGTGTTGGATTTGTATCAAAGGAAATGATCCAGGCTCATT
EY933797       <-- ..................................................
FD562912       --> ..................................................
EV537709       --> ..................................................
EW716096       --> ATGGGATGGTGGTGTTGGATTTGTATC.......................
EW716416       --> ATG...............................................
EY908664       --> ..................................................
EY917045       --> ATGGGATGGTGGTGTTGGAT..............................
EV549067       --> ATGGGATGGTGGTGTTGGATTTGTATCAAAGGAAATGATCCAGGCTCATT
EW723571       --> ATGGG.............................................
EX886504       --> ..................................................
EY937519       --> ..................................................
FD569243       --> ..................................................
EY917244       --> ATGGGATGGTGGTGTT..................................
EY940303       --> ..................................................
EY939258       --> ..................................................
EW724219       --> ..................................................
FD542225       --> ..................................................

               851    -    901
UN20307        --> GCCCTGCACCTGCATCCGATATTCAGGTCTTGAGATGTGGACCACCGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- GCCCTGCACCTGCATCCGATATTCAGGTCTTGAGATGTGGACCACCGCCA
EW728759       <-- GCCCTGCACCTGCATCCGATATTCAGGTCTTGAGATGTGGACCACCGCCA
EW728818       <-- GCCCTGCACCTGCATCCGATATTCAGGTCTTGAGATGTGGACCACCGCCA
EW720284       <-- GCCCTGCACCTGCATCCGATATTCAGGTCTTGAGATGTGGACCACCGCCA
FD573485       <-- GCCCTGCACCTGCATCCGATATTCAGGTCTTGAGATGTGGACCACCGCCA
EV541887       <-- GCCCTGCACCTGCATCCGATATTCAGGTCTTGAGATGTGGACCACCGCCA
FD566700       <-- GCCCTGCACCTGCATCCGATATTCAGGTCTTGAGATGTGGACCACCGCCA
EY904332       <-- GCCCTGCATCTGCATCCGATATTCAGGTCTTGAGATGTGGACCACCGCCA
FD942904       <-- GCCCTGCACCTGCATCCGATATTCAGGTCTTGAGATGTGGACCACCGCCA
EW721700       <-- GCCCTGCACCTGCATCCGATATTCAGGTCTTGAGATGTGGACCACCGCCA
EV544617       <-- GCCCTGCACCTGCATCCGATATTCAGGTCTTGAGATGTGGACCCCCGCCA
EY936081       <-- GCCCTGCACCTGCATCCGATATTCAGGCCTTGAGATGTGGACCACCGCCA
EY912628       <-- GCCCTGCACCTGCATCCGATATTCAGGTCTTGAGATGTGGACCACCGCCA
EY912792       <-- GCCCTGCACCTGCATCCGATATTCAGGTCTTGAGATGTGGACCACCGCCA
EY935229       <-- GCCCTGCACCTGCATCCGATATTCAGGTCTTGAGATGTGGACCACCGCCA
EX890874       <-- GCCCTGCACCTGCATCCGATATTCAGGTCTTGAGATGTGGACCACCGCCA
EY933797       <-- ..................................................
FD562912       --> ..................................................
EV537709       --> ..................................................
EW716096       --> ..................................................
EW716416       --> ..................................................
EY908664       --> ..................................................
EY917045       --> ..................................................
EV549067       --> GCCCTGCACCTGCATCCGATAT............................
EW723571       --> ..................................................
EX886504       --> ..................................................
EY937519       --> ..................................................
FD569243       --> ..................................................
EY917244       --> ..................................................
EY940303       --> ..................................................
EY939258       --> ..................................................
EW724219       --> ..................................................
FD542225       --> ..................................................

               901    -    951
UN20307        --> ATGAACAAGGCCATGGCTGCAAACCTTGAAGCTCTTGGTTACTCTCCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- ATGAACAAGGCCATGGCTGCAAACCTTGAAGCTCTTGGTTACTCTCCAGA
EW728759       <-- ATGAACAAGGCCATGGCTGCAAACCTTGAAGCTCTTGGTTACTCTCCAGA
EW728818       <-- ATGAACAAGGCCATGGCTGCAAACCTTGAAGCTCTTGGTTACTCTCCAGA
EW720284       <-- ATGAACAAGGCCATGGCTGCAAACCTTGAAGCTCTTGGTTACTCTCCAGA
FD573485       <-- ATGAACAAGGCCATGGCTGCAAACCTTGAAGCTCTTGGTTACTCTCCAGA
EV541887       <-- ATGAACAAGGCCATGGCTGCAAACCTTGAAGCTCTTGGTTACTCTCCAGA
FD566700       <-- ATGAACAAGGCCATGGCTGCAAACCTTGAAGCTCTTGGTTACTCTCCAGA
EY904332       <-- ATGAACAAGGCCATGGCTGCAAACCTTGAAGCTCTTGGTTACTCTCCAGA
FD942904       <-- ATGAACAAGGCCATGGCTGCAAACCTTGAAGCTCTTGGTTACTCTCCAGA
EW721700       <-- ATGAACAAGGCCATGGCTGCAAACCTTGAAGCTCTTGGTTACTCTCCAGA
EV544617       <-- ATGAACAAGGCCATGGCTGCAAACCTTGAAGCTCTTGGTTACTCTCCAGA
EY936081       <-- ATGAACAAGGCCATGGCTGCAAACCTTGAAGCTCTTGGTTACTCTCCAGA
EY912628       <-- ATGAACAAGGCCATGGCTGCAAACCTTGAAGCTCTTGGTTACTCTCCAGA
EY912792       <-- ATGAACAAGGCCATGGCTGCAAACCTTGAAGCTCTTGGTTACTCTCCAGA
EY935229       <-- ATGAACAAGGCCATGGCTGCAAACCTTGAAGCTCTTGGTTACTCTCCAGA
EX890874       <-- ATGAACAAGGCCATGGCTGCAAACCTTGAAGCTCTTGGTTACTCTCCAGA
EY933797       <-- ..................................................
FD562912       --> ..................................................
EV537709       --> ..................................................
EW716096       --> ..................................................
EW716416       --> ..................................................
EY908664       --> ..................................................
EY917045       --> ..................................................
EV549067       --> ..................................................
EW723571       --> ..................................................
EX886504       --> ..................................................
EY937519       --> ..................................................
FD569243       --> ..................................................
EY917244       --> ..................................................
EY940303       --> ..................................................
EY939258       --> ..................................................
EW724219       --> ..................................................
FD542225       --> ..................................................

               951    -   1001
UN20307        --> GATGCAATTCCAATTCTAATTGGTCCTAAAAAGATGGAACTATTTAAA-A
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- GATGCAATTCCAATTCTAATTGGTCCTAAAAAGATGGAACTATTTAAA-A
EW728759       <-- GATGCAATTCCAATTCTAATTGGTCCTAAAAAGATGGAACTATTTAAA-A
EW728818       <-- GATGCAATTCCAATTCTAATTGGTCCTAAAAAGATGGAACTATTTAAA-A
EW720284       <-- GATGCAATTCCAATTCTAATTGGTCCTAAAAAGATGGAACTATTTTAA-A
FD573485       <-- GATGCAATTCCAATTTTAATTGGTCCTAAAAAGATGGAACTATTTAAA-A
EV541887       <-- GATGCAATTCCAATTCTAATTGGTCCTAAAAAGACGGAACTATTTAAA-A
FD566700       <-- GATGCAATTCCAATTCTAATTGGTCCTAAAAAGATGGAACTATTTAAA-A
EY904332       <-- GATGCAATTCCAATTCTAATTGGTCCTAAAAAGACGGAACTATTTAAAGG
FD942904       <-- GATGCAATTCCAATTCTAATTGGTCCTAAAAAGATGGAACTATTTAAA-A
EW721700       <-- GATGCAATTCCAATTCTAATTGGTCCTAAAAAGATGGAACTATTTAAA-A
EV544617       <-- GATGCAATTCCAATTTTAATTGGTCCTAAAAAGATGGAACTATTTAAA-A
EY936081       <-- GATGCAATTCCAATTCTAATTGGTCCTAAAAAGATGGAACTATTTAAA-A
EY912628       <-- GATGCAATTCCAATTTTAATTGGTCCTAAAAAGATGGAACTATTTAAA-A
EY912792       <-- GATGCAATTCCAATTCTAATTGG-CCTAAAAAGATGGAACTATTTAAA-A
EY935229       <-- GATGCAATTCCAATTCTAATTGGTCCTAAAAAGATGGAACTATTTAAA-A
EX890874       <-- GATGCAATTCCAATTCTAATTGGTCCTAAAAAGATGGAACTATTTAAA-A
EY933797       <-- ..................................................
FD562912       --> ..................................................
EV537709       --> ..................................................
EW716096       --> ..................................................
EW716416       --> ..................................................
EY908664       --> ..................................................
EY917045       --> ..................................................
EV549067       --> ..................................................
EW723571       --> ..................................................
EX886504       --> ..................................................
EY937519       --> ..................................................
FD569243       --> ..................................................
EY917244       --> ..................................................
EY940303       --> ..................................................
EY939258       --> ..................................................
EW724219       --> ..................................................
FD542225       --> ..................................................

               1001   -   1051
UN20307        --> --AAAACACTTATTTCTTTGATCAAATAATTTTTGTTACAATTTCACTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- --AAAACACTTATTTCTTTGATCAAATAATTTTTGTTACAATTTCACTGA
EW728759       <-- --AAAACACTTATTTCTTTGATCAAATAATTTTTGTTACAATTTCACTGA
EW728818       <-- --AAAACACTTATTTCTTTGATCAAATAATTTTTGTTACAATTTCACTGA
EW720284       <-- --AAAACACTTATTTCTTTGATCAAATAATTTTTGTTACAATTTCACTGA
FD573485       <-- --AAA-CACTTATTTCGTTGATCAAATAATTTTTGTTACAATTTCACTGA
EV541887       <-- GAAAAAAACTTATTTCTTTGATCAAATAATTTTTGTTACAATTTCACTGA
FD566700       <-- --AAAACACTTATTTTTTTGATCAAATAATTTTTGTTACAATTTCACTGA
EY904332       <-- --AAAAAACTTATTTCTTTGATCAAATAATTTTTGTTACAATTTCACTGA
FD942904       <-- --AAAACACTTATTTCTTTGATCAAATAATTTTTGTTACAATTTCACTGA
EW721700       <-- --AAAACACTTATTTCTTTGATCAAATAATTTTTGTTACAATTTCACTGA
EV544617       <-- --AAAACACTTATTTCTTTGATCAAATAATTTTTGTTACAATTTCACTGA
EY936081       <-- --AAAACACTTATTTCTTTGATCAAATAATTTTTGTTACAATTTCACTGA
EY912628       <-- --AAAACACTTATTTCTTTGATCAAATAATTTTTGTTACAATTTCACTGA
EY912792       <-- --AAAACACTTATTTCTTTGATCAAATAATTTTTGTTACAATTTCACTGA
EY935229       <-- --AAAACACTTATTTCTTTGATCAAATAATTTTTGTTACAATTTCACTGA
EX890874       <-- --AAAACACTTATTTCTTTGATCAAATAATTTTTGTTACAATTTCACTGA
EY933797       <-- .............................TTTTTGTTACAATTTCACTGA
FD562912       --> ..................................................
EV537709       --> ..................................................
EW716096       --> ..................................................
EW716416       --> ..................................................
EY908664       --> ..................................................
EY917045       --> ..................................................
EV549067       --> ..................................................
EW723571       --> ..................................................
EX886504       --> ..................................................
EY937519       --> ..................................................
FD569243       --> ..................................................
EY917244       --> ..................................................
EY940303       --> ..................................................
EY939258       --> ..................................................
EW724219       --> ..................................................
FD542225       --> ..................................................

               1051   -   1101
UN20307        --> GACTTGTGTCTTAATTGAG-T-GAGACTTGTATTTCTGTTGTGTTATCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- GACTTGTGTCTTAATTGAG-T-GAGACTTGTATTTCTGTTGTGTTATCCC
EW728759       <-- GACTTGTGTCTTAATTGAG-T-GAGACTTGTATTTCTGTTGTGTTATCCC
EW728818       <-- GACTTGTGTCTTAATTGAG-T-GAGACTTGTATTTCTGTTGTGTTATCCC
EW720284       <-- GACTTGTGTCTTAATTGAG-T-GAGACTTGTATTTCTGTTGTGTTATCCC
FD573485       <-- GACTTGTGTCTTAATTGAG-T-GAGACTTGTATTTCTGTTGTGTTATCCC
EV541887       <-- GACTTGTGTCTTAATTGAG-TTGAGACTTGTATTTCTGTTGTGTTATCCC
FD566700       <-- GACTTGTGTCTTAATTGAG-T-GAGACTTGTATTTCTGTTGTGTTATCCC
EY904332       <-- GACTTGTGTCTTAATTGGGTT-GAGACTTGTATTTCTGTTGTGTTATCCC
FD942904       <-- GACTTGTATCTTAATTGAG-T-GAGACTTGTATTTCTGTTGTGTTATCCC
EW721700       <-- GACTTGTGTCTTAATTGAG-T-GAGACTTGTATTTCTGTTGTGTTATCCC
EV544617       <-- GACTTGTGTCTTAATTGAG-T-GAGACTTGTATTTCTGTTGTGTTATCCC
EY936081       <-- GACTTGTGTCTTAATTGAG-T-GAGACTTGTATTTCTGTTGTGTTATCCC
EY912628       <-- GACTTGTGTCTTAATTGAG-T-GAGACTTGTATTTCTGTTGTGTTATCCC
EY912792       <-- GACTTGTGTCTTAATTGAG-T-GAGACTTGTATTTCTGTTGTGTTATCCC
EY935229       <-- GACTTGTGTCTTAATTGAG-T-GAGACTTGTATTTCTGTTGTGTTATCCC
EX890874       <-- GACTTGTGTCTTAATTGAG-T-GAGACTTGTATTTCTGTTGTGTTATCCC
EY933797       <-- GACTTGTGTCTTAATTGAG-T-GAGACTTGTATTTCTGTTGTGTTATCCC
FD562912       --> ..................................................
EV537709       --> ..................................................
EW716096       --> ..................................................
EW716416       --> ..................................................
EY908664       --> ..................................................
EY917045       --> ..................................................
EV549067       --> ..................................................
EW723571       --> ..................................................
EX886504       --> ..................................................
EY937519       --> ..................................................
FD569243       --> ..................................................
EY917244       --> ..................................................
EY940303       --> ..................................................
EY939258       --> ..................................................
EW724219       --> ..................................................
FD542225       --> ..................................................

               1101   -   1151
UN20307        --> ATAGGGAGTTCCGGTTTGCTTTTTAACGATTTGGTTAGGCATATTGTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- ATAGGGAGTTCCGGTTTGCTTTTTAACGATTTGGTTAGGCATATTGTCTT
EW728759       <-- ATAGGGAGTTCCGGTTTGCTTTTTAACGATTTGGTTAGGCATATTGTCTT
EW728818       <-- ATAGGGAGTTCCGGTTTGCTTTTTAACGATTTGGTTAGGCATATTGTCTT
EW720284       <-- ATAGGGAGTTCCGGTTTGCTTTTTAACGATTTGGTTAGGCATATTGTCTT
FD573485       <-- ATAGGGAGTTCCGGTTTGCTTTTTAACGATTTGGTTAGGCATATTGTCTc
EV541887       <-- ATAGGGAGTTCCGGTTTGCTTTTTAACGATTTGGTTAGGCATATTGTCTT
FD566700       <-- ATAGGGAGTTCCGGTTTGCTTTTTAACGATTTGGTTAGGCATATTGTCTT
EY904332       <-- ATAGGGAGTTCCGGTTTGCTTTTTAACGATTTGGTTAGGCATATTGTCTT
FD942904       <-- ATAGGGAGTTCCGGTTTGCTTTTTAACGATTTGGTTAGGCATATTGTCTT
EW721700       <-- ATAGGGAGTTCCGGTTTGCTTTTTAACGATTTGGTTAGGCATATTGTCTT
EV544617       <-- ATAGGGAGTTCCGGTTTGCTTTTTAACGATTTGGTTAGGCATATTGTCTT
EY936081       <-- ATAGGGAGTTCCGGTTTGCTTTTTAACGATTTGGTTAGGCATATTGTCTT
EY912628       <-- ATAGGGAGTTCCGGTTTGCTTTTTAACGATTTGGTTAGGCATATTGTCTT
EY912792       <-- ATAGGGAGTTCCGGTTTGCTTTTTAACGATTTGGTTAGGCATATTGTCTT
EY935229       <-- ATAGGGAGTTCCGGTTTGCTTTTTAACGATTTGGTTAGGCATATTGTCTT
EX890874       <-- ATAGGGAGTTCCGGTTTGCTTTTTAACGATTTGGTTAGGCATATTGTCTT
EY933797       <-- ATAGGGAGTTCCGGTTTGCTTTTTAACGATTTGGTTAGGCATATTGTCTT
FD562912       --> ..................................................
EV537709       --> ..................................................
EW716096       --> ..................................................
EW716416       --> ..................................................
EY908664       --> ..................................................
EY917045       --> ..................................................
EV549067       --> ..................................................
EW723571       --> ..................................................
EX886504       --> ..................................................
EY937519       --> ..................................................
FD569243       --> ..................................................
EY917244       --> ..................................................
EY940303       --> ..................................................
EY939258       --> ..................................................
EW724219       --> ..................................................
FD542225       --> ..................................................

               1151   -   1201
UN20307        --> ACATGTATCGGTTTGGTTTGATATCATATAAAGACTTGATACTGACATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720393       <-- ACATGTATCGGTTTGGTTTGATATCATATAAAGACTTGATACTGAC....
EW728759       <-- ACGTGTATCGGTTTGGTTTGATATCATATAAAGACTTGATACTGt.....
EW728818       <-- ACATGTATCGGTTTGGTTTGATATCATATGAAGACTTGATACTGAC....
EW720284       <-- ACATGTATCGGTTTGGTTTGATATCATATAAAGACTTGATAC........
FD573485       <-- ..................................................
EV541887       <-- ACATGTATCGGTTTGGTTTGATATCATATAAAGACTTGATATTGA.....
FD566700       <-- ACATGTATCGGTTTGGTTTGATATCATATAAAGACTTGATACTGACATCC
EY904332       <-- ACATGTATCGGTTTGGTTTGATATCATATAAAGACTTG............
FD942904       <-- ACATGTATCGGTTTGGTTTGATATCATATAAAGACTTGATACTGAC....
EW721700       <-- ACATGTATCGGTTTGGTTTGATATCATATAAAGACTTGATACTGAC....
EV544617       <-- ACATGTATCGGTTTGGTTTGATATCATATAAAGACTTGATACTGgc....
EY936081       <-- ACATGTATCGGTTTGGTTTGATATCATATAAAGACTTGATACTGAC....
EY912628       <-- ACATGTATCGGTTTGGTTTGATATCATATAAAGACTTGATACTGAC....
EY912792       <-- ACATGTATCGGTTTGGTTTGATATCATATAAAGACTTGATACTGACg...
EY935229       <-- ACATGTATCGGTTTGGTTTGATATCATATAAAGACTTGATACTGAC....
EX890874       <-- ACATGTATCGGTTTGGTTTGATATCATATAAAGACTTGATACTGAC....
EY933797       <-- ACATGTATCGGTTTGGTTTGATATCATATAAAGACTTG............
FD562912       --> ..................................................
EV537709       --> ..................................................
EW716096       --> ..................................................
EW716416       --> ..................................................
EY908664       --> ..................................................
EY917045       --> ..................................................
EV549067       --> ..................................................
EW723571       --> ..................................................
EX886504       --> ..................................................
EY937519       --> ..................................................
FD569243       --> ..................................................
EY917244       --> ..................................................
EY940303       --> ..................................................
EY939258       --> ..................................................
EW724219       --> ..................................................
FD542225       --> ..................................................

               1201   -   1251
UN20307        --> GC
                   ~~
EW720393       <-- ..
EW728759       <-- ..
EW728818       <-- ..
EW720284       <-- ..
FD573485       <-- ..
EV541887       <-- ..
FD566700       <-- GC
EY904332       <-- ..
FD942904       <-- ..
EW721700       <-- ..
EV544617       <-- ..
EY936081       <-- ..
EY912628       <-- ..
EY912792       <-- ..
EY935229       <-- ..
EX890874       <-- ..
EY933797       <-- ..
FD562912       --> ..
EV537709       --> ..
EW716096       --> ..
EW716416       --> ..
EY908664       --> ..
EY917045       --> ..
EV549067       --> ..
EW723571       --> ..
EX886504       --> ..
EY937519       --> ..
FD569243       --> ..
EY917244       --> ..
EY940303       --> ..
EY939258       --> ..
EW724219       --> ..
FD542225       --> ..