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Alignment for radish unigene UN20313

               -1     -     49
UN20313        --> ..GGGAACAACCATCCGATCTGAGAATATGAGCGAAGAACTCGTTCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540176       <-- ....ggACAACCATCCGATCTGAGAATATGAGCGAAGAACTCGTTCAACA
EW721985       <-- ....ggACAACCATCCGATCTGAGAATATGAGCGAAGAACTCGTTCAACA
EY927564       <-- ....ggACAACCATCCGATCTGAGAATATGAGCGAAGAACTCGTTCAACA
FD529729       <-- ..................TCTGAGAATATGAGCGAAGAACTCGTTCAACA
EX769696       <-- ......................AGAATATGAGCGAAGAACTCGTTCAACA
EY927427       <-- .........................ATATGAGCGAAGAACTCGTTCAACA
FD538404       <-- ..................................................
EX891865       <-- ..................................................
EX760469       <-- ..................................................
FD952742       <-- ..................................................
FD959225       <-- ..................................................
EY928311       <-- ..................................................
FD529549       <-- ..................................................
EW721715       <-- ..................................................
EX758557       <-- ..................................................
FD952970       <-- ..................................................
FY428999       <-- ..................................................
EX761546       <-- ..................................................
EW718080       --> ..GGGAACAACCATCCGATCTGAGAATATGAGCGAAGAACTCGTTCAACA
EX756718       --> ..GGGAACAACCATCCGATCTGAGAATATGAGCGAAGAACTCGTTCAACA
EX887806       --> ..GGGAGCAACCATCCGATCTGAGAATATGAGCGAAGAACTCGTTCAACA
EY931674       --> ..GGGAACAACCATCCGATCTGAGAATATGAGCGAAGAACTCGTTCAACA
FD542293       --> ..GGGAACAACCATCCGATCTGAGAATATGAGCGAAGAACTCGTTCAACA
FD956963       --> ..GGGAACAACCATCCGATCTGAGAATATGAGCGAAGAACTCGTTCAACA
FD962741       --> ..GGGAACAACCATCCGATCTGAGAATATGAGCGAAGAACTCGTTCAACA
EY932621       --> ...GGAACAACCATCCGATCTGAGAATATGAGCGAAGAACTCGTTCAACA
FD957230       --> ...GGAACAACCATCCGATCTGAGAATATGAGCGAAGAACTCGTTCAACA
FD533332       --> gaatGAACAACCATCCGATCTGAGAATATGAGCGAAGAACTCGTTCAACA
EV535513       --> ....ggACAACCATCCGATCTGAGAATATGAGCGAAGAACTCGTTCAACA
EW716597       --> ....ggACAACCATCCGATCTGAGAATATGAGCGAAGAACTCGTTCAACA
EX765994       --> ....ggACAACCATCCGATCTGAGAATATGAGCGAAGAACTCGTTCAACA
EY931472       --> ....ggACAACCATCCGATCTGAGAATATGAGCGAAGAACTCGTTCAACA
FD533583       --> ....ggACAACCATCCGATCTGAGAATATGAGCGAAGAACTCGTTCAACA
EX765893       --> ..........ggATCCGATCTGAGAATATGAGCGAAGAACTCGTTCAACA
EX754171       --> ......................AGAATATGAGCGAAGAACTCGTTCAACA
FY428620       --> .......................................CTCGTTCAA-A
FY430400       --> ..................................................
FD990350       --> ..................................................
FY429708       --> ..................................................
FY432949       --> ..................................................
EW717501       --> ..................................................
EW716035       --> ..................................................
EY900460       --> ..................................................

               49     -     99
UN20313        --> CGAATCTCATTCTCAGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540176       <-- CGAATCTCATTCTCAGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
EW721985       <-- CGAATCTCATTCTCAGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
EY927564       <-- CGAATCTCATTCTCAGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
FD529729       <-- CGAATCTCATTCTCAGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
EX769696       <-- CGAATCTCATTCTCAGCAATCGATATTTAGTCGTTTCTTCAGAATGTTCT
EY927427       <-- CGAATCTCATTCTCAGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
FD538404       <-- ...........CTCAGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
EX891865       <-- ...............GCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
EX760469       <-- ...................................TCTTCAAAATGTTCT
FD952742       <-- ..................................................
FD959225       <-- ..................................................
EY928311       <-- ..................................................
FD529549       <-- ..................................................
EW721715       <-- ..................................................
EX758557       <-- ..................................................
FD952970       <-- ..................................................
FY428999       <-- ..................................................
EX761546       <-- ..................................................
EW718080       --> CGAATCTCATTCTCAGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
EX756718       --> CGAATCTCATTCTCAGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
EX887806       --> CGAATCTCATTCTCAGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
EY931674       --> CGAATCTCATTCTCAGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
FD542293       --> CGAATCTCATTCTCAGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
FD956963       --> CGAATCTCATTCTCAGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCG
FD962741       --> CGAATCTCATTCTCAGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
EY932621       --> CGAATCTCATTCTCAGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
FD957230       --> CGAATCTCATTCTCAGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
FD533332       --> CGAATCTCATTCTCAGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
EV535513       --> CGAATCTCATTCTCAGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
EW716597       --> CGAATCTCATTCTCAGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
EX765994       --> CGAATCTCATTCTCAGCAATCGATATTTAGTCGTTTCTTCAGAATGTTCT
EY931472       --> CGAATCTCATTCTCAGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
FD533583       --> CGAATCTCATTCTCAGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
EX765893       --> CGAATCTCATTCTCAGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
EX754171       --> CGAATCTCATTCTCAGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
FY428620       --> CGAATCTCATTCTCAGCA-TCGATATTTAGCCGTTTCTTCAAA-TGTTCT
FY430400       --> ..........TCTCAGCAATCGATATTTAGCCGTTTCTTCAAA-TGTTCT
FD990350       --> ..............AGCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
FY429708       --> ...............GCAATCGATATTTAGCCGTTTCTTCAAAATGTTCT
FY432949       --> ..................ATCGATATTTAGCCGTTTCTTCAAA-TGTTCT
EW717501       --> ..................................................
EW716035       --> ..................................................
EY900460       --> ..................................................

               99     -    149
UN20313        --> CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540176       <-- CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
EW721985       <-- CTTTTATTTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
EY927564       <-- CTTTTATTTTCCCATTGCTGAATGTTATAAAGATTATTATAGCTTCCGTG
FD529729       <-- CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
EX769696       <-- CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
EY927427       <-- CTTTTATTTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
FD538404       <-- CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
EX891865       <-- CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
EX760469       <-- CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
FD952742       <-- .......................GTTATAAAGATTATTATAGCTTCCGTG
FD959225       <-- ..................................................
EY928311       <-- ..................................................
FD529549       <-- ..................................................
EW721715       <-- ..................................................
EX758557       <-- ..................................................
FD952970       <-- ..................................................
FY428999       <-- ..................................................
EX761546       <-- ..................................................
EW718080       --> CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
EX756718       --> CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
EX887806       --> CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
EY931674       --> CTTTTATTTTCCCATTGCTGAATGTTATAAAGATTATTATAGCTTCCGTG
FD542293       --> CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
FD956963       --> CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
FD962741       --> CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
EY932621       --> CTTTTATTTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
FD957230       --> CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
FD533332       --> CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
EV535513       --> CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
EW716597       --> CTTTTATTTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
EX765994       --> CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
EY931472       --> CTTTTATTTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
FD533583       --> CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
EX765893       --> CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
EX754171       --> CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
FY428620       --> CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
FY430400       --> CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
FD990350       --> CTTTTATCTTCCCATCGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
FY429708       --> CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
FY432949       --> CTTTTATCTTCCCATTGCTGAACGTTATAAAGATTATTATAGCTTCCGTG
EW717501       --> ..................................................
EW716035       --> ..................................................
EY900460       --> ..................................................

               149    -    199
UN20313        --> ACCTCCTTAGTCTTCTTAGCCCTTTCTTGTGTAACACTCGGTGGTTCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540176       <-- ACCTCCTTAGTCTTCTTAGCCCTTTCTTGTGTAACACTCGGTGGTTCAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW721985       <-- ACCTCCTTAGTCTTCTTAGCCCTTTCTTGCGTAACACTCGGTGGTTCAGC  Raphanus sativus var. oleiformis
EY927564       <-- ACCTCCTTAGTCTTCTTAGCCCTTTCTTGCGTAACACTCGGTGGTTCAGC  Raphanus sativus var. oleiformis
FD529729       <-- ACCTCCTTAGTCTTCTTAGCCCTTTCTTGTGTAACATTCGGTGGTTCAGC  Raphanus raphanistrum subsp. maritimus
EX769696       <-- ACCTCCTTAGTCTTCTTAGCCCCTTCTTGTGTAACACTCGGTGGTTCAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY927427       <-- ACCTCCTTAGTCTTCTTAGCCCTTTCTTGCGTAACACTCGGTGGTTCAGC  Raphanus sativus var. oleiformis
FD538404       <-- ACCTCCTTAGTCTTCTTAGCCCTTTCTTGTGTAACACTCGGTGGTTCAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX891865       <-- ACCTCCTTAGTCTTCTTAGCCCTTTCTTGTGTAACATTCGGTGGTTCAGC  Raphanus sativus var. oleiformis
EX760469       <-- ACCTCCTTAGTCTTCTTAGCCCTTTCTTGTGTAACACTCGGTGGTTCAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952742       <-- ACCTCCTTAGTCTTCTTAGCCCTTTCTTGTGTAACACTCGGTGGTTCAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD959225       <-- .......TAGTCTTCTTAGCCCTTTCTTGTGTAACATTCGGTGGTTCAGC  Raphanus raphanistrum subsp. maritimus
EY928311       <-- ..........TCTTCTTAGCCCTTTCTTGCGTAACACTCGGTGGTTCAGC  Raphanus sativus var. oleiformis
FD529549       <-- ............TTCTTAGCCCTTTCTTGTGTAACATTCGGTGGTTCAGC  Raphanus raphanistrum subsp. maritimus
EW721715       <-- ..................................................  Raphanus sativus var. oleiformis
EX758557       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952970       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FY428999       <-- ..................................................  Raphanus sativus cv GSK3-1
EX761546       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW718080       --> ACCTCCTTAGTCTTCTTAGCCCTTTCTTGTGTAACATTCGGTGGTTCAGC  Raphanus sativus var. oleiformis
EX756718       --> ACCTCCTTAGTCTTCTTAGCCCTTTCTTGTGTAACACTCGGTGGTTCAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887806       --> ACCTCCTTAGTCTTCTTAGCCCTTTCTTGTGTAACATTCGGTGGTTCAGC  Raphanus sativus var. oleiformis
EY931674       --> ACCTCCTTAGTCTTCTTAGCCCTTTCTTGCGTAACACTCGGTGGTTCAGC  Raphanus sativus var. oleiformis
FD542293       --> ACCTCCTTAGTCTTCTTAGCCCTTTCTTGTGTAACACTCGGTGGTTCAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD956963       --> ACCTCCTTAGTCTTCTTAGCCCTTTCTTGTGTAACACTCGGTGGTTCAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD962741       --> ACCTCCTTAGTCTTCTTAGCCCTTTCTTGTGTAACATTCGGTGGTTCAGC  Raphanus raphanistrum subsp. maritimus
EY932621       --> ACCTCCTTAGTCTTCTTAGCCCTTTCTTGCGTAACACTCGGTGGTTCAGC  Raphanus sativus var. oleiformis
FD957230       --> ACCTCCTTAGTCTTCTTAGCCCTTTCTTGTGTAACACTCGGTGGTTCAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD533332       --> ACCTCCTTAGTCTTCTTAGCCCTTTCTTGTGTAACATTCGGTGGTTCAGC  Raphanus raphanistrum subsp. maritimus
EV535513       --> ACCTCCTTAGTCTTCTTAGCCCTTTCTTGTGTAACACTCGGTGGTTCAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW716597       --> ACCTCCTTAGTCTTCTTAGCCCTTTCTTGCGTAACACTCGGTGGTTCAGC  Raphanus sativus var. oleiformis
EX765994       --> ACCTCCTTAGTCTTCTTAGCCCCTTCTTGTGTAACACTCGGTGGTTCAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931472       --> ACCTCCTTAGTCTTCTTAGCCCTTTCTTGCGTAACACTCGGTGGTTCAGC  Raphanus sativus var. oleiformis
FD533583       --> ACCTCCTTAGTCTTCTTAGCCCTTTCTTGTGTAACATTCGGTGGTTCAGC  Raphanus raphanistrum subsp. maritimus
EX765893       --> ACCTCCTTAGTCTTCTTAGCCCTTTCTTGTGTAACACTCGGTGGTTCAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX754171       --> ACCTCCTTAGTCTTCTTAGCCCTTTCTTGTGTAACACTCGGTGGTTCAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY428620       --> ACCTCCTTAGTCTTCTTAGCCCTTTCTTGTGTAACACTCGGTGGTTCAGC  Raphanus sativus cv GSK3-1
FY430400       --> ACCTCCTTAGTCTTCTTAGCCCTTTCTTGTGTAACACTCGGTGGTTCAGC  Raphanus sativus cv GSK3-1
FD990350       --> ACCTCCTTAGTCTTCTTAGCCCTTTCTTGCGTAACACTCGGTGGTTCAGC  Raphanus raphanistrum subsp. landra
FY429708       --> ACCTCCTTAGTCTTCTTAGCCCTTTCTTGTGTAACACTCGGTGGTTCAGC  Raphanus sativus cv GSK3-1
FY432949       --> ACCTCCTTAGTCTTCTTAGCCCTTTCTTGTGTAACACTCGGTGGTTCAGC  Raphanus sativus cv GSK3-1
EW717501       --> ..................................................  Raphanus sativus var. oleiformis
EW716035       --> ..................................................  Raphanus sativus var. oleiformis
EY900460       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               199    -    249
UN20313        --> CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540176       <-- CGTGGCATTAATCGTATCCGCACCAGTTTTCATCATACTTAGTCCAATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW721985       <-- CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus sativus var. oleiformis
EY927564       <-- CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus sativus var. oleiformis
FD529729       <-- CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus raphanistrum subsp. maritimus
EX769696       <-- CGTGGCATTAATCGTATCCGCACCAGTTTTCATCATATTTAGTCCAATTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY927427       <-- CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus sativus var. oleiformis
FD538404       <-- CGTGGCATTAATCGTATCCGCACCAGTTTTCATCATATTTAGTCCAATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX891865       <-- CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus sativus var. oleiformis
EX760469       <-- CGTGGCATTAATCGTATCCGCACCAGTTTTCATCATATTTAGTCCAATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952742       <-- CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus sativus cv Rat-Tail Radish #3870
FD959225       <-- CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus raphanistrum subsp. maritimus
EY928311       <-- CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus sativus var. oleiformis
FD529549       <-- CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTT  Raphanus raphanistrum subsp. maritimus
EW721715       <-- .......TTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTT  Raphanus sativus var. oleiformis
EX758557       <-- ................TCCGCACCAGTTTTCATCATATTTAGTCCAATTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952970       <-- .........................................GTCCAATTC  Raphanus sativus cv Rat-Tail Radish #3870
FY428999       <-- ..................................................  Raphanus sativus cv GSK3-1
EX761546       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW718080       --> CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus sativus var. oleiformis
EX756718       --> CGTGGCATTAATCGTATCCGCACCAGTTTTCATCATATTTAGTCCAATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887806       --> CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus sativus var. oleiformis
EY931674       --> CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus sativus var. oleiformis
FD542293       --> CGTGGCATTAATCGTATCCGCACCAGTTTTCATCATATTTAGTCCAATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD956963       --> CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus sativus cv Rat-Tail Radish #3870
FD962741       --> CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus raphanistrum subsp. maritimus
EY932621       --> CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus sativus var. oleiformis
FD957230       --> CGTGGCATTAATCGTATCCTCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus sativus cv Rat-Tail Radish #3870
FD533332       --> CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus raphanistrum subsp. maritimus
EV535513       --> CGTGGCATTAATCGTATCCGCACCAGTTTTCATCATACTTAGTCCAATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW716597       --> CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus sativus var. oleiformis
EX765994       --> CGTGGCATTAATCGTATCCGCACCAGTTTTCATCATATTTAGTCCAATTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931472       --> CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus sativus var. oleiformis
FD533583       --> CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus raphanistrum subsp. maritimus
EX765893       --> CGTGGCATTAATCGTATCCGCACCAGTTTTCATCATATTTAGTCCAATTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX754171       --> CGTGGCATTAATCGTATCCGCACCAGTTTTCATCATATTTAGTCCAATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY428620       --> CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus sativus cv GSK3-1
FY430400       --> CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus sativus cv GSK3-1
FD990350       --> CGTGCCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus raphanistrum subsp. landra
FY429708       --> CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus sativus cv GSK3-1
FY432949       --> CGTGGCATTAATCGTATCCGCACCACTTTTCATCATATTTAGTCCAATTC  Raphanus sativus cv GSK3-1
EW717501       --> ..................................................  Raphanus sativus var. oleiformis
EW716035       --> ..................................................  Raphanus sativus var. oleiformis
EY900460       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               249    -    299
UN20313        --> TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540176       <-- TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
EW721985       <-- TCGTACCCGCCACTATTACCACTACCCTCCTAGCCATTGGGCTCATGGCC
EY927564       <-- TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
FD529729       <-- TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
EX769696       <-- TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
EY927427       <-- TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
FD538404       <-- TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
EX891865       <-- TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
EX760469       <-- TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
FD952742       <-- TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
FD959225       <-- TCGTACCCGCCACTATTACTACTACCCTCCTAGCCAGTGGGCTCATGGCC
EY928311       <-- TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
FD529549       <-- TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
EW721715       <-- TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
EX758557       <-- TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
FD952970       <-- TCGTACCCGCCACTACTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
FY428999       <-- ..................................................
EX761546       <-- ..................................................
EW718080       --> TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
EX756718       --> TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
EX887806       --> TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
EY931674       --> TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
FD542293       --> TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
FD956963       --> TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCT.......
FD962741       --> TCGTACCCGCCACTATTACTACTACCCTCCTAGCCAGTGGGCTCATGGCC
EY932621       --> TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
FD957230       --> TCGTACCCGCCACTACTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
FD533332       --> TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
EV535513       --> TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
EW716597       --> TCGTACCCGCCACTATTACCACTACCCTCCTAGCCATTGGGCTCATGGCC
EX765994       --> TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
EY931472       --> TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
FD533583       --> TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
EX765893       --> TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
EX754171       --> TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
FY428620       --> TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
FY430400       --> TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
FD990350       --> TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
FY429708       --> TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
FY432949       --> TCGTACCCGCCACTATTACCACTACCCTCCTAGCCAGTGGGCTCATGGCC
EW717501       --> ..................................................
EW716035       --> ..................................................
EY900460       --> ..................................................

               299    -    349
UN20313        --> GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540176       <-- GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
EW721985       <-- GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
EY927564       <-- GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
FD529729       <-- GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
EX769696       <-- GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
EY927427       <-- GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
FD538404       <-- GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
EX891865       <-- GGTACCACCCTCGGACCGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
EX760469       <-- GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
FD952742       <-- GGTACCACTCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
FD959225       <-- GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
EY928311       <-- GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
FD529549       <-- GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
EW721715       <-- GGTACCACCCTCGGACCGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
EX758557       <-- GGTACCACCCTCGGACTGACCGGCATAGGTTTCATCACGGGGCTCTTTAG
FD952970       <-- GGTACCACTCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
FY428999       <-- ..................................................
EX761546       <-- ..................................................
EW718080       --> GGTACCACCCTCGGACCGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
EX756718       --> GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
EX887806       --> GGTACCACCCTCGGACCGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
EY931674       --> GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
FD542293       --> GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
FD956963       --> ..................................................
FD962741       --> GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
EY932621       --> GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
FD957230       --> GGTACCACTCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
FD533332       --> GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
EV535513       --> GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
EW716597       --> GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
EX765994       --> GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
EY931472       --> GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
FD533583       --> GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
EX765893       --> GGTACCACCCTCGGACTGACCGGCATAG-TCTCATCGCGGGGCTCTTTAG
EX754171       --> GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
FY428620       --> GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
FY430400       --> GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
FD990350       --> AGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
FY429708       --> GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
FY432949       --> GGTACCACCCTCGGACTGACCGGCATAGGTCTCATCACGGGGCTCTTTAG
EW717501       --> ..................................................
EW716035       --> ..................................................
EY900460       --> ..................................................

               349    -    399
UN20313        --> GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540176       <-- GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
EW721985       <-- GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
EY927564       <-- GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
FD529729       <-- GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
EX769696       <-- GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
EY927427       <-- GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
FD538404       <-- GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
EX891865       <-- GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
EX760469       <-- GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
FD952742       <-- GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
FD959225       <-- GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
EY928311       <-- GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
FD529549       <-- GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
EW721715       <-- GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
EX758557       <-- GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
FD952970       <-- GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
FY428999       <-- ..................................................
EX761546       <-- ..................................................
EW718080       --> GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
EX756718       --> GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
EX887806       --> GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
EY931674       --> GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
FD542293       --> GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
FD956963       --> ..................................................
FD962741       --> GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
EY932621       --> GACTGCAGGAGA......................................
FD957230       --> GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
FD533332       --> GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
EV535513       --> GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
EW716597       --> GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
EX765994       --> GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
EY931472       --> GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
FD533583       --> GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
EX765893       --> GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
EX754171       --> GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
FY428620       --> GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
FY430400       --> GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
FD990350       --> GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
FY429708       --> GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
FY432949       --> GACTGCAGGAGAAGTCACATTGGCCTCAAACCCGTTACGAAGAATTATAA
EW717501       --> ..................................................
EW716035       --> ..................................................
EY900460       --> ..................................................

               399    -    449
UN20313        --> TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540176       <-- TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
EW721985       <-- TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
EY927564       <-- TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
FD529729       <-- TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
EX769696       <-- TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
EY927427       <-- TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
FD538404       <-- TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
EX891865       <-- TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
EX760469       <-- TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
FD952742       <-- TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
FD959225       <-- TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
EY928311       <-- TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
FD529549       <-- TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
EW721715       <-- TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
EX758557       <-- TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTAACGT
FD952970       <-- TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
FY428999       <-- .....................................CGGCGGTTCACGT
EX761546       <-- ..................................................
EW718080       --> TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
EX756718       --> TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
EX887806       --> TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
EY931674       --> TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
FD542293       --> TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
FD956963       --> ..................................................
FD962741       --> TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
EY932621       --> ..................................................
FD957230       --> TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
FD533332       --> TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
EV535513       --> TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
EW716597       --> TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
EX765994       --> TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
EY931472       --> TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
FD533583       --> TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
EX765893       --> TAAATAGAATTAAATCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
EX754171       --> TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTAACGT
FY428620       --> TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
FY430400       --> TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
FD990350       --> TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
FY429708       --> TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
FY432949       --> TAAATAGAATTAAAGCAAGACTTGGGGGTGGCGGTGGCGGCGGTTCACGT
EW717501       --> ..................................................
EW716035       --> ..................................................
EY900460       --> ..................................................

               449    -    499
UN20313        --> TTGGCAATTCTCAAAAAAATTCTGGGACTCGTTAATAAATATCGTAGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540176       <-- TTGGCAATTCTCAAAAAAATTCTAGGACTCGTTAATAAATATCGTAGCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW721985       <-- TTGGCAATTCTCAAAAAAATTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus sativus var. oleiformis
EY927564       <-- TTGGCAATTCTCAAAAAAATTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus sativus var. oleiformis
FD529729       <-- TTGGCAATTCTCAAAAAAATTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus raphanistrum subsp. maritimus
EX769696       <-- TTGGCAATTCTCAAAAAAATTCTAGGACTCGTTAATAAATATCGTAGCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY927427       <-- TTGGCAATTCTCAAAAAAATTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus sativus var. oleiformis
FD538404       <-- TTGGCAATTCTCAAAAAAATTCTAGGACTCGTTAATAAATATCGTAGCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX891865       <-- TTGGCAATTCTCAAAAAAATTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus sativus var. oleiformis
EX760469       <-- TTGGCAATTCTCAAAAAAATTTTAGGACTCGTTAATAAATATCGTAGCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952742       <-- TTGGCAATTCTCAAAAAAATTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus sativus cv Rat-Tail Radish #3870
FD959225       <-- TTGGCAATTCTCAAAAAAATTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus raphanistrum subsp. maritimus
EY928311       <-- TTGGCAATTCTCAAAAAAATTCTGGGACTCGTTAATAAATATCG--TCAT  Raphanus sativus var. oleiformis
FD529549       <-- TTGGCAATTTTCAAAAAAATTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus raphanistrum subsp. maritimus
EW721715       <-- TTGGCAATTTTCAAAAAAATTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus sativus var. oleiformis
EX758557       <-- TTGGCAATTTTCAAAAAAATTTTAGGACTCGTTAATAAATATCGTAGCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952970       <-- TTGGCAATTCTCAAAAAAATTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus sativus cv Rat-Tail Radish #3870
FY428999       <-- TTGGCAATTCTCAAAAAGTTTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus sativus cv GSK3-1
EX761546       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW718080       --> TTGGCAATTCTCAAAAAAATTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus sativus var. oleiformis
EX756718       --> TTGGCAATTCTCAAAAAAATTCTAGGACTCGTTAATAAATATCGTAGCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887806       --> TTGGCAATTCTCAAAAAAATTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus sativus var. oleiformis
EY931674       --> TTGGCAATTCTCAAAAAAATTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus sativus var. oleiformis
FD542293       --> TTGGCAATTCTCAAAAAAATTCTAGGACTCGTTAATAAATATCGTAGCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD956963       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD962741       --> TTGGCAATTCTCAAAAAAATTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus raphanistrum subsp. maritimus
EY932621       --> ..................................................  Raphanus sativus var. oleiformis
FD957230       --> TTGGCAATTCTCAAAAAAATTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus sativus cv Rat-Tail Radish #3870
FD533332       --> TTGGCAATTCTCAAAAAAATTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus raphanistrum subsp. maritimus
EV535513       --> TTGGCAATTCTCAAAAAAATTCTAGGACTCGTTAATAAATATCGTAGCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW716597       --> TTGGCAATTCTCAAAAAAATTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus sativus var. oleiformis
EX765994       --> TTGGCAATTCTCAAAAAAATTCTAGGACTCGTTAATAAATATCGTAGCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931472       --> TTGGCAATTCTCAAAAAAATTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus sativus var. oleiformis
FD533583       --> TTGGCAATTCTCAAAAAAATTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus raphanistrum subsp. maritimus
EX765893       --> TTGGCAATTCTCAAAAAAATTCTAGGACTCGTTAATAAATATCGTAGCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX754171       --> TTGGCAATTCTCAAAAAAATTCTAGGACTCGTTAATAAATATCGTAGCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY428620       --> TTGGCAATTCTCAAAAAGTTTCTGGGACTCGTTAATAAATATCGTAcagg  Raphanus sativus cv GSK3-1
FY430400       --> TTGGCAATTCTCAAAAAGTTTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus sativus cv GSK3-1
FD990350       --> TTGGCAATTCTCAAAAAAATTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus raphanistrum subsp. landra
FY429708       --> TTGGCAATTCTCAAAAAGTTTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus sativus cv GSK3-1
FY432949       --> TTGGCAATTCTCAAAAAGTTTCTGGGACTCGTTAATAAATATCGTAGCAT  Raphanus sativus cv GSK3-1
EW717501       --> ..................................................  Raphanus sativus var. oleiformis
EW716035       --> ..................................................  Raphanus sativus var. oleiformis
EY900460       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               499    -    549
UN20313        --> GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540176       <-- GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
EW721985       <-- GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCCGCAGCTGAAG
EY927564       <-- GGCTTCAGGTGGAGCTGCGGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
FD529729       <-- GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
EX769696       <-- GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCCGAAG
EY927427       <-- GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
FD538404       <-- GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
EX891865       <-- GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
EX760469       <-- GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTACACCTGCAGCTGAAG
FD952742       <-- GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
FD959225       <-- GGCTTCAGGTGGAGCTGCAGCAGCACCGGCAGCTGCACCTGCAGCTGAAG
EY928311       <-- GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
FD529549       <-- GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
EW721715       <-- GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
EX758557       <-- GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCCCCTGCAGCTGAAG
FD952970       <-- GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
FY428999       <-- GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
EX761546       <-- .............................................TGAAG
EW718080       --> GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
EX756718       --> GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTACACCTGCAGCTGAAG
EX887806       --> GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
EY931674       --> GGCTTCAGGTGGAGCTGCGGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
FD542293       --> GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
FD956963       --> ..................................................
FD962741       --> GGCTTCAGGTGGAGCTGCAGCAGCACCGGCAGCTGCACCTGCAGCTGAAG
EY932621       --> ..................................................
FD957230       --> GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
FD533332       --> GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
EV535513       --> GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
EW716597       --> GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCCGCAGCTGAAG
EX765994       --> GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCCGAAG
EY931472       --> GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
FD533583       --> GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
EX765893       --> GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
EX754171       --> GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
FY428620       --> tgagttcaggtgga....................................
FY430400       --> GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
FD990350       --> GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
FY429708       --> GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
FY432949       --> GGCTTCAGGTGGAGCTGCAGCAGCACCAGCAGCTGCACCTGCAGCTGAAG
EW717501       --> ..................................................
EW716035       --> ..................................................
EY900460       --> ..................................................

               549    -    599
UN20313        --> CAGCACCAGCAGCAGATCCAGCAGCGGCACCAGCGGCTGCACCTGCACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540176       <-- CAGCACCAGCAGCAGATCCAGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW721985       <-- CAGCACCAGCAGCAGATCCAGCAGCGGCACCATCGGCTGCACCTGCACCC  Raphanus sativus var. oleiformis
EY927564       <-- CAGCACCAGCAGCAGATCCAGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus sativus var. oleiformis
FD529729       <-- CAGCACCAGCAGCAGATCCTGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus raphanistrum subsp. maritimus
EX769696       <-- CAGCACCAGCAGCAGATCCAGCAGCGGCACCAGCGGCTG...........  Raphanus raphanistrum subsp. raphanistrum (NY)
EY927427       <-- CAGCACCAGTAGCAGATCCAGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus sativus var. oleiformis
FD538404       <-- CAGCACCAGCAGCAGATCCAGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX891865       <-- CAGCACCAGCAGCAGATCCTGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus sativus var. oleiformis
EX760469       <-- CAGCACCAGCAGCAGATCCAGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952742       <-- CAGCACCAGCAGCAGATCCAGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus sativus cv Rat-Tail Radish #3870
FD959225       <-- CAGCACCAGCAGCAGATCCTGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus raphanistrum subsp. maritimus
EY928311       <-- CAGCACCAGCAGCAGATCCAGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus sativus var. oleiformis
FD529549       <-- CAGCACCAGCAGCAGATCCTGCAGCGGCACCGGCGGCTGCACCTGCACCC  Raphanus raphanistrum subsp. maritimus
EW721715       <-- CAGCACCAGCAGCAGATCCTGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus sativus var. oleiformis
EX758557       <-- CAGCCCCAGCAGCAGATCCAGCAGCGGCCCCAGCGGCTGCCCCTGCACCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952970       <-- CAGCACCAGCAGCAGATCCAGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus sativus cv Rat-Tail Radish #3870
FY428999       <-- CAGCCCCAGCAGCAGATCCAGCAGCGGCACCAGGGGCTGCACCTGCACCC  Raphanus sativus cv GSK3-1
EX761546       <-- CAGCACCAGCAGCAGATCCAGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW718080       --> CAGCACCAGCAGCAGATCCTGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus sativus var. oleiformis
EX756718       --> CAGCACCAGCAGCAGATCCAGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX887806       --> CAGCACCAGCAGCAGATCCTGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus sativus var. oleiformis
EY931674       --> CAGCACCAGCAGCAGATCCAGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus sativus var. oleiformis
FD542293       --> CAGCACCAGCAGCAGATCCAGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD956963       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD962741       --> CAGCACCAGCAGCAGATCCTGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus raphanistrum subsp. maritimus
EY932621       --> ..................................................  Raphanus sativus var. oleiformis
FD957230       --> CAGCACCAGCAGCAGATCCAGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus sativus cv Rat-Tail Radish #3870
FD533332       --> CAGCACCAGCAGCAGATCCTGCAGCGGCACCGGCGGCTGCACCTGCACCC  Raphanus raphanistrum subsp. maritimus
EV535513       --> CAGCACCAGCAGCAGATCCAGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW716597       --> CAGCACCAGCAGCAGATCCAGCAGCGGCACCATCGGCTGCACCTGCACCC  Raphanus sativus var. oleiformis
EX765994       --> CAGCACCAGCAGCAGATCCAGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY931472       --> CAGCACCAGTAGCAGATCCAGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus sativus var. oleiformis
FD533583       --> CAGCACCAGCAGCAGATCCTGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus raphanistrum subsp. maritimus
EX765893       --> CAGCACCAGCAGCAGATCCAGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX754171       --> CAGCACCAGCAGCAGATCCAGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY428620       --> ..................................................  Raphanus sativus cv GSK3-1
FY430400       --> CAGCACCAGCAGCAGATCCAGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus sativus cv GSK3-1
FD990350       --> CAGCACCAGCAGCAGATCCAGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus raphanistrum subsp. landra
FY429708       --> CAGCACCAGCAGCAGATCCAGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus sativus cv GSK3-1
FY432949       --> CAGCACCAGCAGCAGATCCAGCAGCGGCACCAGCGGCTGCACCTGCACCC  Raphanus sativus cv GSK3-1
EW717501       --> ..............................gAGCGGCTGCACCTGCACCC  Raphanus sativus var. oleiformis
EW716035       --> ......................................GCACCTGCACCC  Raphanus sativus var. oleiformis
EY900460       --> ..........................................gTGCACCC  Raphanus raphanistrum subsp. maritimus

               599    -    649
UN20313        --> ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAGCATATATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540176       <-- ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAGCATATATA
EW721985       <-- CCCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAACATATATA
EY927564       <-- ATCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAACATATATA
FD529729       <-- ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAGCATATATA
EX769696       <-- ..................................................
EY927427       <-- ACCTGATAAAAAAACGTTGGTTTATACTGTTTCAATATGTAACATATATA
FD538404       <-- ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAGCATATATA
EX891865       <-- ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAGCATATATA
EX760469       <-- ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAGCATATATA
FD952742       <-- ACCTGATAAAAAAACGTTGGTTTATACTGTTTCAATATGTAGCATATATA
FD959225       <-- ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAGCATATATA
EY928311       <-- ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAACATATATA
FD529549       <-- ACCTGATAAAAAC-CGTTGGTTTATACTGTTTCAATATGTAGCATATATA
EW721715       <-- ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAGCATATATA
EX758557       <-- CCCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAGCATATATA
FD952970       <-- ACCTGATAAAAAAACGTTGGTTTATACTGTTTCAATATGTAGCATATATA
FY428999       <-- ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAGCATATATG
EX761546       <-- ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAGCATATATA
EW718080       --> ACCTGATAAAAA--CGTTGGTTTATACTGTTTCA-TATGTAGCATATATA
EX756718       --> ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAGCATATATA
EX887806       --> ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAGCATATATA
EY931674       --> ATCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAACATATATA
FD542293       --> ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAGCATATATA
FD956963       --> ..................................................
FD962741       --> ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAGCATATATA
EY932621       --> ..................................................
FD957230       --> ACCTGATAAAAAAACGTTGGTTTATACTGTTTCAATATGTAGCATATATA
FD533332       --> ACCTGATAAAAAC-CGTTGGTTTATACTGTTTCAATATGTAGCATATATA
EV535513       --> ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAGCATATATA
EW716597       --> ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAACATATATA
EX765994       --> ACCTGATAAAAAA-TGTTGGTTTATACTGTTTCAATATGTAGCATATATA
EY931472       --> ACCTGATAAAAAAACGTTGGTTTATACTGTTTCAATATGTAACATATATA
FD533583       --> ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAGCATATATA
EX765893       --> ACCTGATAAAAAA-TGTTGGTTTATACTGTTTCAATATGTAGCATATATA
EX754171       --> ACCTGATA..........................................
FY428620       --> ..................................................
FY430400       --> ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAGCATATATG
FD990350       --> ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAGCATATATA
FY429708       --> ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAGCATATATG
FY432949       --> ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAGCATATATG
EW717501       --> ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAGCATATATA
EW716035       --> ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAACATATATA
EY900460       --> ACCTGATAAAAAA-CGTTGGTTTATACTGTTTCAATATGTAGCATATATA

               649    -    699
UN20313        --> AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540176       <-- AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAATAA
EW721985       <-- AATCAT-TAATAATTAACTTAAGAATTTATGATACGGAAACTA.......
EY927564       <-- AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAATAA
FD529729       <-- AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAATAA
EX769696       <-- ..................................................
EY927427       <-- AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAATAA
FD538404       <-- AATCATGTAATAATTAACTTAATAATTTATGATACGGA---AAAAAATAA
EX891865       <-- AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAATAA
EX760469       <-- AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAATAA
FD952742       <-- AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAACAA
FD959225       <-- AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAATAA
EY928311       <-- AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAATAA
FD529549       <-- AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAATAA
EW721715       <-- AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAATAA
EX758557       <-- AATCATGTAATAAT....................................
FD952970       <-- AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAACAA
FY428999       <-- AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAATAA
EX761546       <-- AATCATGTAATAATTAAATTAAGAA.........................
EW718080       --> AATCATGTAATAATTAACTTAAGAATTTATGATACGGAA-CTAAAA-TAA
EX756718       --> AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAc..........
EX887806       --> AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAATAA
EY931674       --> AATCATGTAATAATTAACTTAAGAATTTATGATACGGAA-CTAAAA-T-A
FD542293       --> AATCATGTAATAATTAACTTAATAATTTATGATACGGAAA----AAATAA
FD956963       --> ..................................................
FD962741       --> AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAA-T-A
EY932621       --> ..................................................
FD957230       --> AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAACAA
FD533332       --> AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAATAA
EV535513       --> AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAATAA
EW716597       --> AATCATGTAATAATTAACTTAAGA-TTTATGATACGGAAACTAAAAtaaa
EX765994       --> AATCATGTAtatactagat...............................
EY931472       --> AATCATGTAATAATTAACTTAAGAATTTATGATACGGAActaa.......
FD533583       --> AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAA-TAA
EX765893       --> AATCATGTAATGATTAACTTAAGAATTTATGATACGGAA-CTAAAA-T-A
EX754171       --> ..................................................
FY428620       --> ..................................................
FY430400       --> AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAATAA
FD990350       --> AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAA...
FY429708       --> AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAATAA
FY432949       --> AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAATAA
EW717501       --> AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAATAA
EW716035       --> AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAATAA
EY900460       --> AATCATGTAATAATTAACTTAAGAATTTATGATACGGAAACTAAAAATAA

               699    -    749
UN20313        --> AATAGCCTTTTTACTAAGCTTTATACATTATATTTTTCTATGTAACAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540176       <-- AATAGCCTTTTTACTAAGCTTTATACATTATATTTTTCTATGTAACAATG
EW721985       <-- ..................................................
EY927564       <-- AATAGCCTTTTTACTAAGCTTTATACATTATATTTTTCTATGTAACAATG
FD529729       <-- AATAGCCTTTTTACTAAGCTTTATACATTATATTTTTCTATGTAACAATG
EX769696       <-- ..................................................
EY927427       <-- AATAGCCTTTTTACCAAGCTTTATACATTATATTTTTCTATGTAACAATG
FD538404       <-- AATAGCCTTTTTACTAAGCTTTATACATTATATTTTTCTATGTAACAATG
EX891865       <-- AATAGCCTTTTTACTAAGCTTTATACATTATATTTTTCTATGTAACAATG
EX760469       <-- AATAGCCTTTTTACTAAGCTTTATACATTATATTTTTCTATGTAACAATG
FD952742       <-- AATAGCCTTTTTACTAAGCTTTATACATTATATTTTTCTATGTAACAATG
FD959225       <-- AATAGCCTTTTTATTAAGCTTTATACATTATATTTTTCTATGTAACAATG
EY928311       <-- AATAGCCTT--TACTAAGCTTTATACATTATATTTTTCTATGTAACAATG
FD529549       <-- AATAGCCc..........................................
EW721715       <-- AATAGCCTTTTTATTAAGCTTTATACATTATATTTTTCTATGTAACAATG
EX758557       <-- ..................................................
FD952970       <-- AATAGCCTTTTTACTAAGCTTTATACATTATATTTTTCTATGTAACAATG
FY428999       <-- AATAGCCTTTTTACTAAGCTTTATACATTATATTTTTCTATGTAACAATG
EX761546       <-- ..................................................
EW718080       --> A-TAGCCTTTT-ACTAAGCTTTATACATTATATTT--CTATGTA-CA-TG
EX756718       --> ..................................................
EX887806       --> AATAGCCTTTTTACTAAGCTTTATACATTATATTTTTCTATGTAACAATG
EY931674       --> AATAGCCTTTT-ACTAAGCTTTATACATTATA..................
FD542293       --> AATAGCCTTTTTACTAAGCTTTATACATTATATTTT-CTATGTAACAATG
FD956963       --> ..................................................
FD962741       --> AATAGCCTTTTTACTAAGCTTTATACATTATATTTT-CTATGTA-CAATG
EY932621       --> ..................................................
FD957230       --> AATAGCCTTTTTACTAAGCTTTATACATTATATTTTTCTATGTAACAATG
FD533332       --> AATAGCCc..........................................
EV535513       --> AATAGCCTTTTTACTAAGCTTTATACATTATATTTTTCTATGTAACAATG
EW716597       --> tagc..............................................
EX765994       --> ..................................................
EY931472       --> ..................................................
FD533583       --> AATAGCCTTTTTACTAAGCTTTATACATTATATTTTTCTATGTAACAATG
EX765893       --> AATAGCCTTTTT......................................
EX754171       --> ..................................................
FY428620       --> ..................................................
FY430400       --> AATAGCCTTTTTACTAAGCTTTATACATTATATTTTTCTATGTAACAATG
FD990350       --> ..................................................
FY429708       --> AATAGCCTTTTTACTAAGCTTTATACATTATATTTTTCTATGTAACAATG
FY432949       --> AATAGCCTTTTTACTAAGCTTTATACATTATATTTTTCTATGTAACAATG
EW717501       --> AATAGCCTTTTTACTAAGCTTTATACATTATATTTTTCTATGTAACAATG
EW716035       --> AATAGTCTTTTTACTAAGCTTTATACATTATATTTTTCTATGTAACAATG
EY900460       --> AATAGCCTTTTTACTAAGCTTTATACATTATATTTTTCTATGTAACAATG

               749    -    799
UN20313        --> TTTAATTTGCTTATAATTATAAAAGACGGATACATAGTTGACTAGAAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540176       <-- TTTAATTTGCTTATAATTATAAAAGACGGATACATAGTTGACTAG.....
EW721985       <-- ..................................................
EY927564       <-- TTTAATTTGCTTATAATTATAAAAGACGGATACATAGTTGAC........
FD529729       <-- TTTAATTTGCTTATAATTATAAAAGACGGATACATAGTTGACTAG.....
EX769696       <-- ..................................................
EY927427       <-- TTTAATTTGCTTATAATTATAAAAGACGGATACATAGTTGACTAG.....
FD538404       <-- TTTAATTTGCTTATAATTATAAAAGACGGATACATAGTTGACTAG.....
EX891865       <-- TTTAATTTGCTTATAATTATAAAAGACGGATACATAGTTGACc.......
EX760469       <-- TTTAATTTGCTTATAATTATAAAAGACGGATACATAGTTGACTAGAAAAT
FD952742       <-- TTTAATTTGCTTATAATTATAAAAGACGGATACATAGTTGACc.......
FD959225       <-- TTTAATTTGCTTATAATTATAAAAGACGGATACATAGTTGAC........
EY928311       <-- TTTAATTTGCTTATAATTATAAAAGACGGATACATAGTTGACT.......
FD529549       <-- ..................................................
EW721715       <-- TTTAATTTGCTTATAATTATAAAAGACGGATACATAGTTGACc.......
EX758557       <-- ..................................................
FD952970       <-- TTTAATTTGCTTATAATTATAAAAGACGGATACATAGTTGACTAG.....
FY428999       <-- TTTAATTTGCTTATAATTATAAAAGACGGATACATAGTTGACTAGAAAAT
EX761546       <-- ..................................................
EW718080       --> TTTA-TTTGCTatatataa...............................
EX756718       --> ..................................................
EX887806       --> TTTAATTTGCTTATAATTATAAAA..........................
EY931674       --> ..................................................
FD542293       --> TTTAATTTGCTTATAATTATAAAAGACGGATACATAGTTGACTAGAAAAa
FD956963       --> ..................................................
FD962741       --> TT-AATTTGCTTATAAT-ATAAA-GACGGATACATAGTTGAC........
EY932621       --> ..................................................
FD957230       --> TTTAATTTGCT.......................................
FD533332       --> ..................................................
EV535513       --> TTTAATTTGCTTATAATTATAAA...........................
EW716597       --> ..................................................
EX765994       --> ..................................................
EY931472       --> ..................................................
FD533583       --> TTTAATTTGCTTATAATTATAAA-GAC-GATACATAGTTGACT.......
EX765893       --> ..................................................
EX754171       --> ..................................................
FY428620       --> ..................................................
FY430400       --> TTTAATTTGCTTATAATTATAAAAGACGGATACATAGTTGACTAGAAAAT
FD990350       --> ..................................................
FY429708       --> TTTAATTTGCTTATAATTATAAAAGACGGATACATAGTTGACT.......
FY432949       --> TTTAATTTGCTTATAATTATAAAAGACGGATACATAGTTGACTAGAAAAT
EW717501       --> TTTAATTTGCTTATAATTATAAAAGACGGATACATAGTTGACTAGAAAAT
EW716035       --> TTTAATTTGCTTATAATTATAAAAGACGGATACATAGTTGACTAGAAAAT
EY900460       --> TTTAATTTGCTTATAATTATAAAAGACGGATACATAGTTGACTAG.....

               799    -    849
UN20313        --> AATGTTAACTATCTATTGTCCATGCGCT..
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV540176       <-- ..............................
EW721985       <-- ..............................
EY927564       <-- ..............................
FD529729       <-- ..............................
EX769696       <-- ..............................
EY927427       <-- ..............................
FD538404       <-- ..............................
EX891865       <-- ..............................
EX760469       <-- AATGTTAACTATCTATTGTCCATGCGCTcc
FD952742       <-- ..............................
FD959225       <-- ..............................
EY928311       <-- ..............................
FD529549       <-- ..............................
EW721715       <-- ..............................
EX758557       <-- ..............................
FD952970       <-- ..............................
FY428999       <-- AATGTTAACT....................
EX761546       <-- ..............................
EW718080       --> ..............................
EX756718       --> ..............................
EX887806       --> ..............................
EY931674       --> ..............................
FD542293       --> ..............................
FD956963       --> ..............................
FD962741       --> ..............................
EY932621       --> ..............................
FD957230       --> ..............................
FD533332       --> ..............................
EV535513       --> ..............................
EW716597       --> ..............................
EX765994       --> ..............................
EY931472       --> ..............................
FD533583       --> ..............................
EX765893       --> ..............................
EX754171       --> ..............................
FY428620       --> ..............................
FY430400       --> AATGTTAACTATCT................
FD990350       --> ..............................
FY429708       --> ..............................
FY432949       --> AATGTTAACTATCT................
EW717501       --> AATGTTAACTATCTATTGTCCATGCGCTtc
EW716035       --> AATGTTAACTATCT................
EY900460       --> ..............................