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Alignment for radish unigene UN20382

               1      -     51
UN20382        --> GGGATGATTTGCTTAGTGGAGATAGTAGTGAGGAGGATGACAGTGGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- ..................................................
FD531603       <-- ..................................................
FD974914       <-- ..................................................
FD943022       <-- ..................................................
FD536068       --> GGGATGATTTGCTTAGTGGAGATAGTAGTGAGGAGGATGACAGTGGAGAT
EW717575       --> ..................................................
FD947009       --> ..................................................

               51     -    101
UN20382        --> GATGAGGCTTTCGTTGGGAAAGTGGTTTCCGATAACCCAAGTACTGAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- ..................................................
FD531603       <-- ..................................................
FD974914       <-- ..................................................
FD943022       <-- ..................................................
FD536068       --> GATGAGGCTTTCGTTGGGAAAGTGGTTTCCGATAACCCAAGTACTGAAAC
EW717575       --> ..................................................
FD947009       --> ..................................................

               101    -    151
UN20382        --> TGCTAAAACTTCAGATTCTTACTTATCTAAGACAAGATTTGATCAGTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- ..................................................
FD531603       <-- ..................................................
FD974914       <-- ..................................................
FD943022       <-- ..................................................
FD536068       --> TGCTAAAACTTCAGATTCTTACTTATCTAAGACAAGATTTGATCAGTTCC
EW717575       --> ..................................................
FD947009       --> ..................................................

               151    -    201
UN20382        --> CATTGTCTCCCTTATCACTAAGAGCCATCAAGGATGCTGGATTTGAGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- ..................................................
FD531603       <-- ..................................................
FD974914       <-- ..................................................
FD943022       <-- ..................................................
FD536068       --> CATTGTCTCCCTTATCACTAAGAGCCATCAAGGATGCTGGATTTGAGACA
EW717575       --> ..................................................
FD947009       --> ..................................................

               201    -    251
UN20382        --> ATGACTGTTGTGCAGGAGGCTACTCTTCCTATCATTCTCAAAGGTAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- ..................................................
FD531603       <-- ..................................................
FD974914       <-- ..................................................
FD943022       <-- ..................................................
FD536068       --> ATGACTGTTGTGCAGGAGGCTACTCTTCCTATCATTCTCAAAGGTAAAGA
EW717575       --> ..................................................
FD947009       --> ..................................................

               251    -    301
UN20382        --> CGTGCTAGCCAAGGCCAAAACAGGCACTGGGAAAACCGTAGCATTTTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- ..................................................
FD531603       <-- ..................................................
FD974914       <-- ..................................................
FD943022       <-- ..................................................
FD536068       --> CGTGCTAGCCAAGGCCAAAACAGGCACTGGGAAAACCGTAGCATTTTTGC
EW717575       --> ..................................................
FD947009       --> ..................................................

               301    -    351
UN20382        --> TTCCATCAATTGAAGCTGTTATCAAATCTCCACCTGCAAGCCGGGATAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- ..................................................
FD531603       <-- ..................................................
FD974914       <-- ..................................................
FD943022       <-- ..................................................
FD536068       --> TTCCATCAATTGAAGCTGTTATCAAATCTCCACCTGCAAGCCGGGATAGT
EW717575       --> ..................................................
FD947009       --> ..................................................

               351    -    401
UN20382        --> AGGCAATCCCCCATTGTTGTGCTTGTTGTATGCCCTACTCGGGAACTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- ..................................................
FD531603       <-- ..................................................
FD974914       <-- ..................................................
FD943022       <-- ..................................................
FD536068       --> AGGCAATCCCCCATTGTTGTGCTTGTTGTATGCCCTACTCGGGAACTTGC
EW717575       --> ..................................................
FD947009       --> ..................................................

               401    -    451
UN20382        --> CAGTCAAGCGGCTGCGGAAGCTAATACCTTGCTGAAGTATCACCCATCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- ..................................................
FD531603       <-- ..................................................
FD974914       <-- ..................................................
FD943022       <-- ..................................................
FD536068       --> CAGTCAAGCGGCTGCGGAAGCTAATACCTTGCTGAAGTATCACCCATCTA
EW717575       --> ..................................................
FD947009       --> ..................................................

               451    -    501
UN20382        --> TCGGTGTTCAAGTTGTTATTGGAGGCACAAAGCTTCCTACAGAGCAAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- ..................................................
FD531603       <-- ..................................................
FD974914       <-- ..................................................
FD943022       <-- ..................................................
FD536068       --> TCGGTGTTCAAGTTGTTATTGGAGGCACAAAGCTTCCTACAGAGCAAAGG
EW717575       --> .............................ggGCTTCCTACAGAGCAAAGG
FD947009       --> ..................................................

               501    -    551
UN20382        --> CGTATGCAAGCAAATCCTTGCCAGATTCTTGTGGCGACACCTGGAAGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- ..................................................
FD531603       <-- ..................................................
FD974914       <-- ..................................................
FD943022       <-- ..................................................
FD536068       --> CGTATGCAAGCAAATCCTTGCCAGATTCTTGTGGCGACACCTGGAAGGCT
EW717575       --> CGTATGCAAGCAAATCCTTGCCAGATTCTTGTGGCGACACCTGGAAGGCT
FD947009       --> ..................................................

               551    -    601
UN20382        --> CGAAGACCATATCGAGAACACTTCTGGATTTGCCACGAGATTGAATGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- ..................................................
FD531603       <-- ..................................................
FD974914       <-- ..................................................
FD943022       <-- ..................................................
FD536068       --> CAAAGACCATATCGAGAACACTTCTGGATTTGCCACGAGATTGAATGGTG
EW717575       --> CGAAGACCATATCGAGAACACTTCTGGATTTGCCACAAGATTGAATGGTG
FD947009       --> ..................................................

               601    -    651
UN20382        --> TGAAAGTCCTTGTGCTTGATGAAGCTGATCATCTCTTGGACATGGGTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- ..................................................
FD531603       <-- ..................................................
FD974914       <-- ..................................................
FD943022       <-- ..................................................
FD536068       --> TGAAAGTCCTTGTGCTTGATGAAGCTGATCATCTCTTGGACATGGGT...
EW717575       --> TGAAAGTCCTTGTGCTTGATGAAGCTGATCATCTCTTGGACATGGGTTTC
FD947009       --> ..................................................

               651    -    701
UN20382        --> CGAAGGGATATCGAGAGGATCATCGCTGCTGTTCCTAAGCAGAGACAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- ..................................................
FD531603       <-- ..................................................
FD974914       <-- ..................................................
FD943022       <-- ..................................................
FD536068       --> ..................................................
EW717575       --> CGAAGGGATATCGAGAGGATCATCGCTGCTGTTCCTAAGCAGAGACAAAC
FD947009       --> ..................................................

               701    -    751
UN20382        --> GTTTTTATTTTCTGCCACAGTACCTGAAGAGGTCCGCCAAATATGCCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- ..................................................
FD531603       <-- ..................................................
FD974914       <-- ..................................................
FD943022       <-- ..................................................
FD536068       --> ..................................................
EW717575       --> GTTTTTATTTTCTGCCACAGTACCTGAAGAGGTCCGCCAAATATGCCACA
FD947009       --> ..................................................

               751    -    801
UN20382        --> TTGCTTTGAAACGGGATCATGAGTTCATCAATTGCGTTCAAGAGGGATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- ....................................gTCAAGAGG-ATCT
FD531603       <-- ..................................................
FD974914       <-- ..................................................
FD943022       <-- ..................................................
FD536068       --> ..................................................
EW717575       --> TTGCTTTGAAACGGGATCATGAGTTCATCAATTGCGTTCAAGAGGGATCT
FD947009       --> ..................................................

               801    -    851
UN20382        --> GGGGAGACGCATCAAAAGGTCAAACAAATGTACATGAT-GCATCACTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- GGG-AGACGCATCAAAAG-TC-AACAAATGTACATGAT-GCATCACTGGA
FD531603       <-- .......CGCATCAAAAGGTCAAACAAATGTACATGAT-GCATCACTGGA
FD974914       <-- ..................................................
FD943022       <-- ..................................................
FD536068       --> ..................................................
EW717575       --> GGGGAGACGCATCAAAAGGTCAAACAAATGTACATGATTGCATCACTGGA
FD947009       --> ..................................................

               851    -    901
UN20382        --> TAGACATTTCTCGCTTCTATATGTGCTTCTTAAAGAACACATCGCAGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- TAGACATTTCTCGCTTCTATATGTGCTTCTTAAAGAACACATCGCAGATA
FD531603       <-- TAGACATTTCTCGCTTCTATATGTGCTTCTTAAAGAACACATCGCAGATA
FD974914       <-- ..................................................
FD943022       <-- ..................................................
FD536068       --> ..................................................
EW717575       --> TAGACATTTCTCGCTTCTATATGTGCTTCTTAAAGAACACATCGCAGATA
FD947009       --> ..................................................

               901    -    951
UN20382        --> ATCCAGACTATAAGGTTATTATTTTCTGCACAACTGCCATGGTTACAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- ATCCAGACTATAAGGTTATTATTTTCTGCACAACTGCCATGGTTACAAGA
FD531603       <-- -TCCAGACTATAAGGTTATTATTTTCTGTACAACTGCCATGGTTACAAGA
FD974914       <-- .................................ccGCCATGGTTACAAGA
FD943022       <-- ..................................................
FD536068       --> ..................................................
EW717575       --> ATCCAGACTATAAGGTTATTATTTTCTGCACAACTGCCATGGTTACAAGA
FD947009       --> ..................................................

               951    -   1001
UN20382        --> TTGGTTGCTGATCTGCTTGGTCAGCTAAGCTTGAACGTCAGAGAGATCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- TTGGTTGCTGATCTGCTTGGTCAGCTAAGCTTGAACGTCAGAGAGATCCA
FD531603       <-- TTGGTTGCTGATCTGCTTGGTCAGCTAAGCTTGAACGTCAGAGAGATCCA
FD974914       <-- TTGGTTGCTGATCTGCTTGGTCAGCTAAGCTTGAACGTCAGAGAGATCCA
FD943022       <-- ..................................................
FD536068       --> ..................................................
EW717575       --> TTGGTTGCTGATCTGCTTGGTCAGCTAAGCTTGAACGTCAGAGAGATCCA
FD947009       --> ..................................................

               1001   -   1051
UN20382        --> TTCTAGAAAACCCCAGGGTTACAGAACCAAAGTTTCCGACGAGTTCCGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- TTCTAGAAAACCCCAGGGTTACAGAACCAAAGTCTCCGACGAGTTCCGCA  Raphanus sativus var. oleiformis
FD531603       <-- TTCTAGGAAACCCCAGGGTTACAGAACCAAAGTTTCCGACGAGTTCCGCA  Raphanus raphanistrum subsp. maritimus
FD974914       <-- TTCTAGAAAGCCCCAGGGTTACAGAACCAAAGTCTCCGACGAGTTCCGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD943022       <-- ..gTAGGAAACCCCAGGGTTACAGAACCAAAGTTTCCGACGAGTTCCGCA  Raphanus sativus cv Early Scarlet Globe
FD536068       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW717575       --> TTCTAGAAAACCCCAGGGTTACAGAACCAAAGTCTCCGACGAGTTCCGCA  Raphanus sativus var. oleiformis
FD947009       --> ..gTAGGAAACCCCAGGGTTACAGAACCAAAGTTTCCGACGAGTTCCGCA  Raphanus sativus cv Early Scarlet Globe

               1051   -   1101
UN20382        --> AGTCGAAGAGTATTATCCTTGTGACATCAGATGTATCTGCTCGTGGTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- AGTCGAAGAGTATTATCCTTGTGACATCAGATGTATCTGCTCGTGGTGTT
FD531603       <-- AGTCGAAGAGTATTATCCTTGTGACATCAGATGTATCTGCTCGTGGTGTC
FD974914       <-- AGTCGAAGAGTATTATCCTTGTGACATCAGATGTATCTGCTCGTGGTGTC
FD943022       <-- AGTCGAAGAGTATTATCCTTGTGACATCAGATGTATCTGCTCGTGGTGTC
FD536068       --> ..................................................
EW717575       --> AGTCGAAGAGTATTATCCTTGTGACATCAGATGTATCTGCTCGTGGTGTT
FD947009       --> AGTCGAAGAGTATTATCCTTGTGACATCAGATGTATCTGCTCGTGGTGTC

               1101   -   1151
UN20382        --> GATTACCCTGATGTGTCACTAGTGGTACAGATGGGATTGCCATCAGACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- GATTACCCTGATGTGTCACTAGTCGTACAGATGGGATTGCCATCAGACAG  Raphanus sativus var. oleiformis
FD531603       <-- GATTACCCTGATGTGTCACTAGTGGTACAGATGGGATTGCCATCAGACAG  Raphanus raphanistrum subsp. maritimus
FD974914       <-- GATTACCCTGATGTGTCACTAGTCGTACAGATGGGATTGCCATCAGACAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD943022       <-- GATTACCCTGATGTGTCACTAGTGGTACAGATGGGATTGCCATCAGACAG  Raphanus sativus cv Early Scarlet Globe
FD536068       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW717575       --> GATTACCCTGATGTGTCACTAGTCGTACAGATGGGATTGCCATCAGACAG  Raphanus sativus var. oleiformis
FD947009       --> GATTACCCTGATGTGTCACTAGTGGTACAGATGGGATTGCCATCAGACAG  Raphanus sativus cv Early Scarlet Globe

               1151   -   1201
UN20382        --> AGAACAATACATACATAGACTTGGGAGAACGGGGAGGAAAGGTAAGGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- AGAACAATACATACATAGACTTGGGAGAACGGGGAGGAAAGGTAAGGAAG
FD531603       <-- AGAACAATACATACATAGACTTGGGAGAACGGGGAGGAAAGGTAAGGAAG
FD974914       <-- AGAACAATACATACATAGACTTGGGAGAACGGGGAGGAAAGGTAAGGAAG
FD943022       <-- AGAACAATACATACATAGACTTGGGAGAACGGGGAGGAAAGGTAAGGAAG
FD536068       --> ..................................................
EW717575       --> AGAACA-TACATACATAGACTTGGGAGAc.....................
FD947009       --> AGAACAATACATACATAGACTTGGGAGAACGGGGAGGAAAGGTAAGGAAG

               1201   -   1251
UN20382        --> GAGAAGGTGTGCTAATGTTGGCGCCATGGGAAGAGTACTTTCTGTCATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- GAGAAGGTGTACTAATGTTGGCACCATGGGAAGAGTACTTTTTGTCATCT
FD531603       <-- GAGAAGGTGTGCTAATGTTGGCGCCATGGGAAGAGTACTTCCTGTCATCT
FD974914       <-- GAGAAGGTGTACTAATGTTGGCGCCATGGGAAGAGTACTTTCTGTCATCT
FD943022       <-- GAGAAGGTGTGCTAATGTTGGCGCCATGGGAAGAGTACTTTCTGTCATCT
FD536068       --> ..................................................
EW717575       --> ..................................................
FD947009       --> GAGAAGGTGTGCTAATGTTGGCGCCATGGGAAGAGTACTTTCTGTCATCT

               1251   -   1301
UN20382        --> GTTAAAGACTTGCCCATCAACAAGTCTCCTCTACCGCCAATAGACCCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- GTTAAAGACTTGCCCATCAACAAGTCTCCTCTACCGCCAATAGACCCTGA
FD531603       <-- GTTAAAGACTTGCCCATCAACAAGTCTCCTCTACCGCCAATAGACCCTGA
FD974914       <-- GTTAAAGACTTGCCCATCCACAAGTCTCCTCTACCGCCAATAGACCCTGA
FD943022       <-- GTTAAAGACTTGCCCATCAACAAGTCTCCTCTACCGCCAATAGACCCTGA
FD536068       --> ..................................................
EW717575       --> ..................................................
FD947009       --> GTTAAAGACTTGCCCATCAACAAGTCTCCTCTACCGCCAATAGACCCTGA

               1301   -   1351
UN20382        --> GGCTGTGAAAAAGGTGCAGAGAGGGCTTAACCAAGTGGAAATGAAGAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- GACTGTGAAAAAGGTGCAGAGAGGGCTTAACCAAGTGGAAATGAAGAACA
FD531603       <-- GGCTGTGAAAAAGGTGCAGAGAGGGCTTAACCAAGTGGAAATGAAGAACA
FD974914       <-- GGCTGTGAAAAAGGTGCAGAGAGGGCTTAACCAAGTGGAAATGAAGAACA
FD943022       <-- GGCTGTGAAAAAGGTGCAGAGAGGGCTTAACCAAGTGGAAATGAAGAACA
FD536068       --> ..................................................
EW717575       --> ..................................................
FD947009       --> GGCTGTGAAAAAGGTGCAGAGAGGGCTTAACCAAGTGGAAATGAAGAACA

               1351   -   1401
UN20382        --> AGGAAGCGGCGTATCAGGCGTGGTTGGGTTACTACAAATCTCAGAAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- AGGAAGCGGCGTATCAGGCGTGGTTGGGTTACTACAAATCTCAGAAGATG
FD531603       <-- AGGAAGCGGCGTATCAGGCGTGGTTGGGTTACTACAAATCTCAGAAGATG
FD974914       <-- AGGAGGCAGCATATCAGGCATGGTTGGGTTACTACAAATCTCAGAAGATG
FD943022       <-- AGGAAGCGGCGTATCAGGCGTGGTTGGGTTACTACAAATCTCAGAAGATG
FD536068       --> ..................................................
EW717575       --> ..................................................
FD947009       --> AGGAAGCGGCGTATCAGGCGTGGTTGGGTTACTACAAATCTCAGAAGATG

               1401   -   1451
UN20382        --> ATTGCAAGAGACACGACCAGACTGGTGGAGTTAGCCAACGAGTTTAGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- ATTGCAAGAGACACGACCAGACTGGTGGAGTTGGCCAATGAGTTTAGCCG
FD531603       <-- ATTGCAAGAGACACGACCAGACTGGTGGAGTTAGCCAACGAGTTTAGCCG
FD974914       <-- ATTGCAAGAGACACGACAAGACTGGTGGAGTTAGCCAACGAGTTTAGCCG
FD943022       <-- ATTGCAAGAGACACGACCAGACTGGTGGAGTTAGCCAACGAGTTTAGCCG
FD536068       --> ..................................................
EW717575       --> ..................................................
FD947009       --> ATTGCAAGAGACACGACCAGACTGGTGGAGTTAGCCAACGAGTTTAGCCG

               1451   -   1501
UN20382        --> CAGCATGGGACTTGACATGCCACCAGCTATCCCCAAAAACGTTCTTGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- CAGCATGGGACTTGACATGCCACCAGCTATCCCCAAAAATGTTCTTGGCA
FD531603       <-- CAGCATGGGACTTGACATGCCACCAGCTATCCCCAAAAACGTTCTTGGCA
FD974914       <-- CAGCATGGGACTTGACATGCCCCCAGCTATCCCCAAAAATGTTCTTGGCA
FD943022       <-- CAGCATGGGACTTGACATGCCACCAGCTATCCCCAAAAACGTTCTTGGCA
FD536068       --> ..................................................
EW717575       --> ..................................................
FD947009       --> CAGCATGGGACTTGACATGCCACCAGCTATCCCCAAAAACGTTCTTGGCA

               1501   -   1551
UN20382        --> AGATGGGTCTCAAAAACGTTCCTGGTCTTAGAACCAAGTAG-AATTTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- AGATGGGTCTCAAAAACGTTCCTGGTCTTAGAACCAAGTAG-AATTT-AA
FD531603       <-- ATATGGGTCTCAAAAACGTTCCTGGTCTTAGAACCAAGTAGGAATTTTAA
FD974914       <-- AGATGGGTCTCAAAAACGTTCCTGGTCTTAGAACCAAGTAG-AATTTTAA
FD943022       <-- AGATGGGTCTCAAAAACGTTCCTGGTCTTAGAACCAAGTAG-AATTTTAA
FD536068       --> ..................................................
EW717575       --> ..................................................
FD947009       --> AGATGGGTCTCAAAAACGTTCCTGGTCTTAGAACCAAGTAG-AATTTTAA

               1551   -   1601
UN20382        --> CTCCATCCATTGTTTTGCTTTTGTCGTATAAGGCTTTGCAAGTGTAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- CTCCATTCATTGTTTTGCTTTTGTCGTATAAGGCTTTGCAAGTGTAATCT
FD531603       <-- CTCCATCCATTGTTTTGCTTTTGTCGTATAAGGCTTTGCAAGTGTAATCT
FD974914       <-- CTCCATCCATTGTTTTACTTTTGTCGTATAAGGCTTTGTAAGTGTAATCT
FD943022       <-- CTCCATCCATTGTTTTGCTTTTGTCGTATAAGGCTTTGCAAGTGTAATCT
FD536068       --> ..................................................
EW717575       --> ..................................................
FD947009       --> CTCCATCCATTGTTTTGCTTTTGTCGTATAAG-CTTTGCAAGTGTAATCT

               1601   -   1651
UN20382        --> CTTTTTCACAACCCTTCTTGCAAA-CACTTGATAAAAAAGTCTCTTAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- CTTTTTCACAACCCTTCTTGCAAA-CACTTGATAAAAAAGTCTCTTAGAT
FD531603       <-- CTTTTTCACAACCCTTCTTGCAAA-CACTGGATAAAAA-GTCTCTTAGAT
FD974914       <-- CTTTT-CACAACCCTTCTTGCAAAACACTTGATAAAAAAGTCTCCTATAT
FD943022       <-- CTTTTTCACAACCCTTCTTGCAAA-CACTTGATAAAAA-GTCTCTTAGAT
FD536068       --> ..................................................
EW717575       --> ..................................................
FD947009       --> CTTTTTCACAACCCTTCTTGC.............................

               1651   -   1701
UN20382        --> TCTTCAGTTGTATCAAACAAACCGAAAGAAAAGCTTGACTATCCAAGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- Tg................................................
FD531603       <-- TC................................................
FD974914       <-- TCTTCACTTGTATCAAACAAACCAAAAGAAAAGCTTGACTATCCAAGCAG
FD943022       <-- TCTTCAGTTGTATCAAACAAACCGAAAGAAAAGCTTGACTATCCAAGCAG
FD536068       --> ..................................................
EW717575       --> ..................................................
FD947009       --> ..................................................

               1701   -   1751
UN20382        --> AGGCCAGAGGCCCGGTTCAAGTTCTACAAGAATAATATAAATTAATTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721470       <-- ..................................................
FD531603       <-- ..................................................
FD974914       <-- AGGCCAGAGGCCCGGTTCAAGTTCTACAAGAATAATATAAATTAATTTCT
FD943022       <-- gcccggtgtaaagttctataag............................
FD536068       --> ..................................................
EW717575       --> ..................................................
FD947009       --> ..................................................

               1751   -   1801
UN20382        --> AG
                   ~~
EW721470       <-- ..
FD531603       <-- ..
FD974914       <-- AG
FD943022       <-- ..
FD536068       --> ..
EW717575       --> ..
FD947009       --> ..