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Alignment for radish unigene UN20464

               1      -     51
UN20464        --> AGGGGAACCATCAAACCAACAAGCTTAAATTCAAAAAAA-GTTAATAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542164       <-- ...GGAACCATCAAACCAACAAGCTTAAATTCAAAAAAAAGTTAATAATA
EV571959       <-- ...GGAACCATCAAACCAACAAGCTTAAATTCAAAAAAA-GTTAATAATA
EW718981       <-- ...GGAACCATCAAACCAACAAGCTTAAATTCAAAAAAAAGTTAATAATA
EY935606       <-- ...GGAACCATCAAACCAACAAGCTTAAATTCAAAAAA--GTTAATAATA
FD566346       <-- ....GAACCATCAAACCAACAAGCTTAAATTCAAAAAAA-GTTAATAATA
EW721136       <-- ....ggACCATCAAACCAACAAGCTTAAATTCAAAAAAA-GTTAATAATA
FD563696       --> AGGGGAACCATCAAACCAACAAGCTTAAATTCAAAAAA--GTTAATAATA
EX895881       --> ..GGGAACCATCAAACCAACAAGCTTAAATTCAAAAAAA-GTTAATAATA
EV566942       --> ...GGAACCATCAAACCAACAAGCTTAAATTCAAAAAAA-GTTAATAATA
EW726549       --> ...GGAACCATCAAACCAACAAGCTTAAATTCAAAAAAA-GTTAATAATA
EX747426       --> ...GGAACCATCAAACCAACAAGCTTAAATTCAAAAAAAAGTTAATAATA
EX755116       --> ...GGAACCATCAAACCAACAAGCTTAAATTCAAAAAAAAGTTAATAATA
EX757556       --> ...GGAACCATCAAACCAACAAGCTTAAATTCAAAAAAA-GTTAATAACA
EX762531       --> ...GGAACCATCAAACCAATAAACTTAAATTCAAAAAAA-GTTAATAATA
EX888176       --> ...GGAACCATCAAACCAACAAGCTTAAATTCAAAAAAA-GTTAATAATA
EX889863       --> ...GGAACCATCAAACCAACAAGCTTAAATTCAAAAAAA-GTTAATAATA
EY900545       --> ...GGAACCATCAAACCAACAAGCTTAAATTCAAAAAAA-GTTAATAATA
EY939718       --> ...GGAACCATCAAACCAACAAGCTTAAATTCAAAAAA--GTTAATAATA
EY949368       --> ...GGAACCATCAAACCAACAAGCTTAAATTCAAAAAAA-GTTAATAATA
FD542662       --> ...GGAACCATCAAACCAACAAGCTTAAATTCAAAAAAAAGTTAATAATA
FD562442       --> ...GGAACCATCAAACCAACAAGCTTAAATTCAAAAAAA-GTTAATAATA
FD939710       --> ...GGAACCATCAAACCAACAAGCTTAAATTCAAAAAAA-GTTAATAATA
FD957346       --> ...GGAACCATCAAACCAACAAGCTTAAATTCAAAAAAA-GTTAATAATA
FD970910       --> ...GGAACCATCAAACCAACAAGCTTAAATTCAAAAAAA-GTTAATAACA
FD972375       --> ...GGAACCATCAAACCAACAAGCTTAAATTCAAAAAA--GTTAATAACA
EY933013       --> ....GAACCATCAAACCAACAAGCTTAAATTCAAAAAAA-GTTAATAATA
FD562435       --> ....GAACCATCAAACCAACAAGCTTAAATTCAAAAAAA-GTTAATAATA
EW716811       --> ....ggACCATCAAACCAACAAGCTTAAATTCAAAAAAA-GTTAATAATA
EY915875       --> ....ggACCATCAAACCAATAAACTTAAATTCAAAAAAA-GTTAATAATA
EW726517       --> ......gggATCAAACCAACAAGCTTAAATTCAAAAAAA-GTTAATAATA
EX746585       --> .......ggATCAAACCAACAAGCTTAAATTCAAAAAAA-GTTAATAATA
EV536737       --> .........ggaAAACCAACAAGCTTAAATTCAAAAAAAAGTTAATAATA
FD569309       --> ........................TTAAATTCAAAAAAA-GTTAATAATA
EW714835       --> ..................................................
EW717337       --> ..................................................
EV535101       --> ..................................................

               51     -    101
UN20464        --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542164       <-- AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCATCATCACAG
EV571959       <-- AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
EW718981       <-- AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
EY935606       <-- AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
FD566346       <-- AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
EW721136       <-- AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
FD563696       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAAT-TCGTCATCACAG
EX895881       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
EV566942       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
EW726549       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
EX747426       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
EX755116       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCATCGTCACAG
EX757556       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
EX762531       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
EX888176       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
EX889863       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
EY900545       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
EY939718       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
EY949368       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
FD542662       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCATCATCACAG
FD562442       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
FD939710       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
FD957346       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
FD970910       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
FD972375       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
EY933013       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
FD562435       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
EW716811       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
EY915875       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
EW726517       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
EX746585       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
EV536737       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCATCATCACAG
FD569309       --> AACGTGTGTATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
EW714835       --> ........TATTGTAAGAATATCACAAAGAACAAAATGTCGTCATCACAG
EW717337       --> ........TATGGTAAAAATATCACAAAAAACAAAATGTCGTCATCACAG
EV535101       --> ..............AAGAATATCACAAAGAACAAAATGTCGTCATCACAG

               101    -    151
UN20464        --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCACGAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542164       <-- TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCATGAATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571959       <-- TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCACGAATT  Raphanus raphanistrum subsp. landra
EW718981       <-- TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCACGAATT  Raphanus sativus var. oleiformis
EY935606       <-- TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCACGAATT  Raphanus sativus cv Early Scarlet Globe
FD566346       <-- TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCACGAATT  Raphanus sativus var. oleiformis
EW721136       <-- TTCGCTATCTTTTGCACCATCTTGATTGCTTTATTTCCTCTTCACGAATT  Raphanus sativus var. oleiformis
FD563696       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCACGAATT  Raphanus sativus var. oleiformis
EX895881       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCATGAATT  Raphanus sativus cv Early Scarlet Globe
EV566942       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCACGAATT  Raphanus raphanistrum subsp. landra
EW726549       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCACGAATT  Raphanus sativus cv Early Scarlet Globe
EX747426       --> TTCGCTATCTTCTGCATCATCTTGATTGCTTTATTTCCTCTTCACGAATT  Raphanus raphanistrum subsp. maritimus
EX755116       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCATGAATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757556       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCATGAATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762531       --> TTCGCTATCTTTTGCATCATTTTGATTGCTTTATTTCCTCTTCATGAATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888176       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCACGAATT  Raphanus sativus var. oleiformis
EX889863       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCACGAATT  Raphanus sativus var. oleiformis
EY900545       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCACGAATT  Raphanus raphanistrum subsp. maritimus
EY939718       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCACGAATT  Raphanus sativus cv Early Scarlet Globe
EY949368       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCACGAATT  Raphanus sativus cv Rat-Tail Radish #3870
FD542662       --> TTCGCTATCTTTTG-ATCATCTTGtt........................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562442       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCACGAATT  Raphanus sativus var. oleiformis
FD939710       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCACGAATT  Raphanus sativus var. oleiformis
FD957346       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCACGAATT  Raphanus sativus cv Rat-Tail Radish #3870
FD970910       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCATGAATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972375       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCATGAATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933013       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCACGAATT  Raphanus sativus var. oleiformis
FD562435       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCACGAATT  Raphanus sativus var. oleiformis
EW716811       --> TTCGCTATCTTTTGCACCATCTTGATTGCTTTATTTCCTCTTCACGAATT  Raphanus sativus var. oleiformis
EY915875       --> TTCGCTATCTTTTGCATCATTTTGATTGCTTTATTTCCTCTTCATGAATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726517       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCATGAATT  Raphanus sativus cv Early Scarlet Globe
EX746585       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCACGAATT  Raphanus raphanistrum subsp. maritimus
EV536737       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCATGAATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD569309       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCACGAATT  Raphanus sativus cv Early Scarlet Globe
EW714835       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCACGAATT  Raphanus sativus var. oleiformis
EW717337       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCACAAATT  Raphanus sativus var. oleiformis
EV535101       --> TTCGCTATCTTTTGCATCATCTTGATTGCTTTATTTCCTCTTCATGAATT  Raphanus raphanistrum subsp. raphanistrum (MS)

               151    -    201
UN20464        --> TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542164       <-- TGTCGATGCCCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571959       <-- TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus raphanistrum subsp. landra
EW718981       <-- TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus sativus var. oleiformis
EY935606       <-- TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus sativus cv Early Scarlet Globe
FD566346       <-- TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus sativus var. oleiformis
EW721136       <-- TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus sativus var. oleiformis
FD563696       --> TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus sativus var. oleiformis
EX895881       --> TGTCGATGGCCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus sativus cv Early Scarlet Globe
EV566942       --> TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus raphanistrum subsp. landra
EW726549       --> TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus sativus cv Early Scarlet Globe
EX747426       --> TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus raphanistrum subsp. maritimus
EX755116       --> TGTCGATGCCCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757556       --> TGTCGATGGCCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762531       --> TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888176       --> TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus sativus var. oleiformis
EX889863       --> TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus sativus var. oleiformis
EY900545       --> TGCCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus raphanistrum subsp. maritimus
EY939718       --> TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus sativus cv Early Scarlet Globe
EY949368       --> TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD542662       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562442       --> TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus sativus var. oleiformis
FD939710       --> TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus sativus var. oleiformis
FD957346       --> TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD970910       --> TGTCGATGGCCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972375       --> TGTCGATGGCCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933013       --> TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus sativus var. oleiformis
FD562435       --> TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus sativus var. oleiformis
EW716811       --> TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus sativus var. oleiformis
EY915875       --> TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726517       --> TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus sativus cv Early Scarlet Globe
EX746585       --> TGTCGATGGTCAAGGAACGTGCAGACAAACCCCATGCCCCAACGCCAAAG  Raphanus raphanistrum subsp. maritimus
EV536737       --> TGTCGATGCCCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD569309       --> TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATCCCCCAACGCCAAAG  Raphanus sativus cv Early Scarlet Globe
EW714835       --> TGTCGATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus sativus var. oleiformis
EW717337       --> TGTCAATGGTCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAA  Raphanus sativus var. oleiformis
EV535101       --> TGTCGATGGCCAAGGAACTTGCAAACAAACCCCATGCCCCAACGCCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)

               201    -    251
UN20464        --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542164       <-- ATAAAAATAAGACTTGTTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
EV571959       <-- ATAAAAATAAGACTTGCTTTTGTTGTCCCCCCAATAACAGGTGTTACGCG
EW718981       <-- ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTATGCG
EY935606       <-- ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
FD566346       <-- ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGT-TTACGCG
EW721136       <-- ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
FD563696       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
EX895881       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
EV566942       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCCCCAATAACAGGTGTTACGCG
EW726549       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
EX747426       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
EX755116       --> ATAAAAATAAGACTTGTTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
EX757556       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
EX762531       --> ATAAAAATAAGACTTGCTTT-GTTGTCCCTCCAATAACAGGTGTTACGCG
EX888176       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
EX889863       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
EY900545       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
EY939718       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
EY949368       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
FD542662       --> ..................................................
FD562442       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
FD939710       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
FD957346       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
FD970910       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
FD972375       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
EY933013       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
FD562435       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGT-TTACGCG
EW716811       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
EY915875       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
EW726517       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
EX746585       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
EV536737       --> ATAAAAATAAGACTTGTTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
FD569309       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG
EW714835       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTATGCG
EW717337       --> ATAAAAATAAAACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACCCG
EV535101       --> ATAAAAATAAGACTTGCTTTTGTTGTCCCTCCAATAACAGGTGTTACGCG

               251    -    301
UN20464        --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542164       <-- ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EV571959       <-- ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EW718981       <-- ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EY935606       <-- ACCAAAGATACATGCGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
FD566346       <-- ACCAAGGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EW721136       <-- ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
FD563696       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EX895881       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EV566942       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EW726549       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EX747426       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EX755116       --> ACCAAAGGTACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EX757556       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EX762531       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EX888176       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EX889863       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EY900545       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EY939718       --> ACCAAAGATACATGCGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EY949368       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
FD542662       --> ..................................................
FD562442       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
FD939710       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
FD957346       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
FD970910       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
FD972375       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EY933013       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
FD562435       --> ACCAAGGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EW716811       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EY915875       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EW726517       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EX746585       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EV536737       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
FD569309       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EW714835       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG
EW717337       --> ACCAAAAATACATGTGCAGGTTGGTGGGGCAAACAATAAGTTATCTTGAA
EV535101       --> ACCAAAGATACATGTGCAGGTTGGTGTGGCAAACAATAAGTTATCTTGAG

               301    -    351
UN20464        --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542164       <-- AACCTACATCAAAGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
EV571959       <-- AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
EW718981       <-- AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
EY935606       <-- AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
FD566346       <-- AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
EW721136       <-- AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
FD563696       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
EX895881       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
EV566942       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
EW726549       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAGTTC
EX747426       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
EX755116       --> AACCTACATCAAAGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
EX757556       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
EX762531       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
EX888176       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
EX889863       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
EY900545       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
EY939718       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
EY949368       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
FD542662       --> ..................................................
FD562442       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
FD939710       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
FD957346       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
FD970910       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
FD972375       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
EY933013       --> AACCTACATCATGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
FD562435       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
EW716811       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
EY915875       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
EW726517       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
EX746585       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
EV536737       --> AACCTACATCAAAGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
FD569309       --> AACCTACATCAATGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
EW714835       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC
EW717337       --> AACCTACATCAAGGATTTAAAAAAATCTGAATAACCATTTTATTTAATTC
EV535101       --> AACCTACATCAAGGATTTAAGAAAATCTGAATAACCATTTTATTTAATTC

               351    -    401
UN20464        --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542164       <-- TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
EV571959       <-- TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
EW718981       <-- TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
EY935606       <-- TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
FD566346       <-- TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
EW721136       <-- TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATACTCATCTGGAG
FD563696       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
EX895881       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
EV566942       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
EW726549       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
EX747426       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
EX755116       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
EX757556       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAGCATGCTCATCTGGAG
EX762531       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
EX888176       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
EX889863       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
EY900545       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
EY939718       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
EY949368       --> TTCCTAATATCTACTTTTGTTTTAAATGAATAAAACATGCTCATCTGGAG
FD542662       --> ..................................................
FD562442       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
FD939710       --> ATCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
FD957346       --> TTCCTAATATCTACTTTTGTTTTAAATGAATAAAACATGCTCATCTGGAG
FD970910       --> TTCCTAATATCTACTTTTGTTTCATATGAATAAAACATGCTCATCTGGAG
FD972375       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
EY933013       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
FD562435       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
EW716811       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATACTCATCTGGAG
EY915875       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
EW726517       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
EX746585       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
EV536737       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
FD569309       --> TTCCTAATATCTACTTCTGTTTTATATGAATAAAACATGCTCATCTGGAG
EW714835       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
EW717337       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG
EV535101       --> TTCCTAATATCTACTTTTGTTTTATATGAATAAAACATGCTCATCTGGAG

               401    -    451
UN20464        --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542164       <-- CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAAAAACTTTCAT
EV571959       <-- CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
EW718981       <-- CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
EY935606       <-- CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
FD566346       <-- CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
EW721136       <-- CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
FD563696       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
EX895881       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
EV566942       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
EW726549       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
EX747426       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
EX755116       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAAAAACTTTCAT
EX757556       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
EX762531       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
EX888176       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
EX889863       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
EY900545       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
EY939718       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
EY949368       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
FD542662       --> ..................................................
FD562442       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
FD939710       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAGCTTTCAT
FD957346       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
FD970910       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
FD972375       --> CCCAACAAATACAATGTATGTCTATTGTATTTGTGTTTAGAAACTTTCAT
EY933013       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
FD562435       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
EW716811       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
EY915875       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
EW726517       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
EX746585       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
EV536737       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAAAAACTTTCAT
FD569309       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
EW714835       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT
EW717337       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAAAAACTTTCAT
EV535101       --> CCCAACAAATACAATGTATGTCTACTGTATTTGTGTTTAGAAACTTTCAT

               451    -    501
UN20464        --> ATTCTATCATATGTAATGCGAATAAATTAAACTTATTTTTTCTCCTTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542164       <-- ATTCTATTATATGTAATGCAAATAAATTAAACTT-TTTTTTCTCCTTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571959       <-- ATTCTATCATATGTAATGCGAATAA.........................  Raphanus raphanistrum subsp. landra
EW718981       <-- ATTCTATCATATGTAATGCGAATAA.........................  Raphanus sativus var. oleiformis
EY935606       <-- ATTCTATCATATGTAATGCGAATAA.........................  Raphanus sativus cv Early Scarlet Globe
FD566346       <-- ATTCTATCATATGTAATGCGAATAA.........................  Raphanus sativus var. oleiformis
EW721136       <-- ATTCTATCATATGTAATGCGAATAA.........................  Raphanus sativus var. oleiformis
FD563696       --> ATTCTATCATATGTAATGCGAATAAATTAAACTT................  Raphanus sativus var. oleiformis
EX895881       --> ATTCTATCATATGTAATGCGAATAA.........................  Raphanus sativus cv Early Scarlet Globe
EV566942       --> ATTCTATCATATGTAATGCGAATAA.........................  Raphanus raphanistrum subsp. landra
EW726549       --> ATTCTATCATATGTAATGCGAATAA.........................  Raphanus sativus cv Early Scarlet Globe
EX747426       --> ATTCTATCATATGTAATGCGAATAAATTAAACTT................  Raphanus raphanistrum subsp. maritimus
EX755116       --> ATTCTATTATATGTAATGC-AATAAATTAAACTT-TTTTTTCTCCT....  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757556       --> ATTCTATTATATGTAATGCGAATAAATTAAACT.................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762531       --> ATTCTATTATATGTAATGCGAATAA.........................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX888176       --> ATTCTATCATATGTAATGCGAATAA.........................  Raphanus sativus var. oleiformis
EX889863       --> ATTCTATCATATGTAATGCGAATAA.........................  Raphanus sativus var. oleiformis
EY900545       --> ATTCTATCATATGTAATGCGAATAA.........................  Raphanus raphanistrum subsp. maritimus
EY939718       --> ATTCTATCATATGTAATGCGAATAA.........................  Raphanus sativus cv Early Scarlet Globe
EY949368       --> ATTCTA............................................  Raphanus sativus cv Rat-Tail Radish #3870
FD542662       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562442       --> ATTCTATCATATGTAATGCGAATAA.........................  Raphanus sativus var. oleiformis
FD939710       --> ATTCTATCATATGTAATGCGAATAA.........................  Raphanus sativus var. oleiformis
FD957346       --> ATTCTAT...........................................  Raphanus sativus cv Rat-Tail Radish #3870
FD970910       --> ATTCTATTATATGTAATGCGAAT...........................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972375       --> ATTCTATTATATGTAATGCGAATAA.........................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933013       --> ATTCTATCATATGTAATGCGAATAA.........................  Raphanus sativus var. oleiformis
FD562435       --> ATTCTATCATATGTAATGCGAATAA.........................  Raphanus sativus var. oleiformis
EW716811       --> ATTCTATCATATGTAATGCGAATAA.........................  Raphanus sativus var. oleiformis
EY915875       --> ATTCTATTATATGTAATGCGAATAA.........................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW726517       --> ATTCTATCATATGTAATGCGAATAA.........................  Raphanus sativus cv Early Scarlet Globe
EX746585       --> ATTCTATCATATGTAATGCGAATAA.........................  Raphanus raphanistrum subsp. maritimus
EV536737       --> ATTCTATTATATGTAATGCAAATAAATTAAACTTTTTTTTTCTCCTaag.  Raphanus raphanistrum subsp. raphanistrum (MS)
FD569309       --> ATTCTATCATATGTAATGCGAATAAATTAAATTTATTTTTTCTCCTTTTG  Raphanus sativus cv Early Scarlet Globe
EW714835       --> ATTCTATCATATGTAATGCGAATAA.........................  Raphanus sativus var. oleiformis
EW717337       --> ATTCTATCATATGTAATGCGAATAAATTAAACTTA...............  Raphanus sativus var. oleiformis
EV535101       --> ATTCTATTATATGTAATGCGAATAAATTAAACTTATTTTT-CTCCTTTTG  Raphanus raphanistrum subsp. raphanistrum (MS)

               501    -    551
UN20464        --> TTTTAATTTGCTATTAATTTCTTAAATATTTCTTCGGGTTAAAAGATTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542164       <-- TTTTAACTTGCTATTAATTTCTTAAATATTTCTTCGGGTT..........
EV571959       <-- ..................................................
EW718981       <-- ..................................................
EY935606       <-- ..................................................
FD566346       <-- ..................................................
EW721136       <-- ..................................................
FD563696       --> ..................................................
EX895881       --> ..................................................
EV566942       --> ..................................................
EW726549       --> ..................................................
EX747426       --> ..................................................
EX755116       --> ..................................................
EX757556       --> ..................................................
EX762531       --> ..................................................
EX888176       --> ..................................................
EX889863       --> ..................................................
EY900545       --> ..................................................
EY939718       --> ..................................................
EY949368       --> ..................................................
FD542662       --> ..................................................
FD562442       --> ..................................................
FD939710       --> ..................................................
FD957346       --> ..................................................
FD970910       --> ..................................................
FD972375       --> ..................................................
EY933013       --> ..................................................
FD562435       --> ..................................................
EW716811       --> ..................................................
EY915875       --> ..................................................
EW726517       --> ..................................................
EX746585       --> ..................................................
EV536737       --> ..................................................
FD569309       --> TTTTAATTTGCTATTAATTTCTTAAATATTTCTTCGGGTTAAAAGATTAC
EW714835       --> ..................................................
EW717337       --> ..................................................
EV535101       --> TTTTAATTTGCTA.....................................

               551    -    601
UN20464        --> AACGAAGTTTTTTTTAATAACAATTTTTTGACATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV542164       <-- ....................................
EV571959       <-- ....................................
EW718981       <-- ....................................
EY935606       <-- ....................................
FD566346       <-- ....................................
EW721136       <-- ....................................
FD563696       --> ....................................
EX895881       --> ....................................
EV566942       --> ....................................
EW726549       --> ....................................
EX747426       --> ....................................
EX755116       --> ....................................
EX757556       --> ....................................
EX762531       --> ....................................
EX888176       --> ....................................
EX889863       --> ....................................
EY900545       --> ....................................
EY939718       --> ....................................
EY949368       --> ....................................
FD542662       --> ....................................
FD562442       --> ....................................
FD939710       --> ....................................
FD957346       --> ....................................
FD970910       --> ....................................
FD972375       --> ....................................
EY933013       --> ....................................
FD562435       --> ....................................
EW716811       --> ....................................
EY915875       --> ....................................
EW726517       --> ....................................
EX746585       --> ....................................
EV536737       --> ....................................
FD569309       --> AACGAAGTTTTTTTTAATAACAATTTTTTGACATTT
EW714835       --> ....................................
EW717337       --> ....................................
EV535101       --> ....................................