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Alignment for radish unigene UN20556

               1      -     51
UN20556        --> GATTCTCTGCTACAAACCATTGATTACTTTTTCCTGCAAAGTTTATTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ..................................................
FY432142       --> GATTCTCTGCTACAAACCATTGATTACTTTTTCCTGCAAAGTTTATTTAT
FD946723       --> ..................................................
EV549815       --> ..................................................
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> ..................................................
EY929618       --> ..................................................
EX757876       --> ..................................................

               51     -    101
UN20556        --> TTATTTTTGGTTTGGTACAATAACTTCATTAACATGGCACACTAGTGCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ..................................................
FY432142       --> TTATTTTTGGTTTGGTACAATAACTTCATTAACATGGCACACTAGTGCGT
FD946723       --> ..................................................
EV549815       --> ..................................................
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> ..................................................
EY929618       --> ..................................................
EX757876       --> ..................................................

               101    -    151
UN20556        --> CGGTTTACAATAGTTCTTTTTCATCCAAAAGCTTCGGAATGTTTATGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ..................................................
FY432142       --> CGGTTTACAATAGTTCTTTTTCATCCAAAAGCTTCGGAATGTTTATGGAC
FD946723       --> ..................................................
EV549815       --> ..................................................
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> ..................................................
EY929618       --> ..................................................
EX757876       --> ..................................................

               151    -    201
UN20556        --> TTCATAGGTCAATGGGTCATGAACTTTTTTTTTCTTCCAAGTTCAAACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ..................................................
FY432142       --> TTCATAGGTCAATGGGTCATGAACTTTTTTTTTCTTCCAAGTTCAAACCA
FD946723       --> ..................................................
EV549815       --> ..................................................
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> ..................................................
EY929618       --> ..................................................
EX757876       --> ..................................................

               201    -    251
UN20556        --> CGTGGTTATTACATTAGTGCAAGCAGTTTCCAGAAAACAGTGAACGGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ..................................................
FY432142       --> CGTGGTTATTACATTAGTGCAAGCAGTTTCCAGAAAACAGTGAACGGCAA
FD946723       --> ..................................................
EV549815       --> ..................................................
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> ..................................................
EY929618       --> ..................................................
EX757876       --> ..................................................

               251    -    301
UN20556        --> ATTTGGTAAGGACAGATATATTATAAGATGAGTATTTAAAGAAGACAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ..................................................
FY432142       --> ATTTGGTAAGGACAGATATATTATAAGATGAGTATTTAAAGAAGACAAGT
FD946723       --> ..................................................
EV549815       --> ..................................................
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> ..................................................
EY929618       --> ..................................................
EX757876       --> ..................................................

               301    -    351
UN20556        --> TAATTAGATACTGAAGCAAATTAGTATTCCCATCACTCCAAATTATAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ..................................................
FY432142       --> TAATTAGATACTGAAGCAAATTAGTATTCCCATCACTCCAAATTATAAGA
FD946723       --> ..................................................
EV549815       --> ..................................................
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> ..................................................
EY929618       --> ..................................................
EX757876       --> ..................................................

               351    -    401
UN20556        --> ATCTATAAACGCAAATTAGTAGATTTTAGATATTTATATCGAAATTTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ..................................................
FY432142       --> ATCTATAAACGCAAATTAGTAGATTTTAGATATTTATATCGAAATTTAAC
FD946723       --> ..................................................
EV549815       --> ..................................................
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> ..................................................
EY929618       --> ..................................................
EX757876       --> ..................................................

               401    -    451
UN20556        --> CATACACGTTCTAAATAATCATTTTCGGTGATTGTGAAAGATAATATATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ..................................................
FY432142       --> CATACACGTTCTAAATAATCATTTTCGGTGATTGTGAAAGATAATATATA
FD946723       --> ..................................................
EV549815       --> ..................................................
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> ..................................................
EY929618       --> ..................................................
EX757876       --> ..................................................

               451    -    501
UN20556        --> TACATACATCTGTGTATCTCACCCTAACTTTTATTAAAAAAATATCTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ..................................................
FY432142       --> TACATACATCTGTGTATCTCACCCTAACTTTTATTAAAAAAATATCTCAC
FD946723       --> ..................................................
EV549815       --> ..................................................
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> ..................................................
EY929618       --> ..................................................
EX757876       --> ..................................................

               501    -    551
UN20556        --> GCTGGTATTCTCGGGTCGGTTGAAATCGTAGCTCGAAGAAACCACGTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ..................................................
FY432142       --> GCTGGTATTCTCGGGTCGGTTGAAATCGTAGCTCGAAGAAACCACGTGTA
FD946723       --> ..................................................
EV549815       --> ..................................................
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> ..................................................
EY929618       --> ..................................................
EX757876       --> ..................................................

               551    -    601
UN20556        --> TTTTGTCATTGATGTAAGATATTTGAACTGTTCCTCTCTTTCTTTTTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ..................................................
FY432142       --> TTTTGTCATTGATGTAAGATATTTGAACTGTTCCTCTCTTTCTTTTTCTC
FD946723       --> ..................................................
EV549815       --> ..................................................
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> ..................................................
EY929618       --> ..................................................
EX757876       --> ..................................................

               601    -    651
UN20556        --> ATATCTCACTTAACCACCACTTGGCTTCACACCACACATTATAAGCGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ..................................................
FY432142       --> ATATCTCACTTAACCACCACTTGGCTTCACACCACACATTATAAGCGTGT
FD946723       --> ..................................................
EV549815       --> ..................................................
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> ..................................................
EY929618       --> ..................................................
EX757876       --> ..................................................

               651    -    701
UN20556        --> CCTCAAAAAATCTCTCATCACTCTCAAAACACATTCCTCTTTCTTCTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ..................................................
FY432142       --> CCTCAAAAAATCTCTCATCACTCTCAAAACACATTCCTCTTTCTTCTTCA
FD946723       --> ..............ggATCACTCTCAAAACACATTCCTCTTTCTTCTTCA
EV549815       --> .................ggACTCTCAAAACACATTCCTCTTTCTTCTTCA
FD568857       --> .................ggACTCTCAAAACACATTCCTCTTTCTTCTTCA
FD947525       --> ..................gACTCTCAAAACACATTCCTCTTTCTTCTTCA
FD989029       --> ..................................................
EY929618       --> ..................................................
EX757876       --> ..................................................

               701    -    751
UN20556        --> TTTCCTTCCTCAGCTCCTTTTCATTCTTATGCAAGATAGGAAACAAGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ..................................................
FY432142       --> TTTCCTTCCTCAGCTCCTTTTCATTCTTATGCAAGATAGGAAACAAGTAT
FD946723       --> TTTCCTTCCTCAGCTCCTTTTCATTCTTATGCAAGATAGGAAACAAGTAT
EV549815       --> TTTCCTTCGTCAGCTCCTTTTCATTCTTATGCAAGATAGGAAACAAGTAT
FD568857       --> TTTCCTTCCTCAGCTCCTTTTCATTCTTATGCAAGATAGGAAACAAGTAT
FD947525       --> TTTCCTTCCTCAGCTCCTTTTCATTCTTATGCAAGATAGGAAACAAGTAT
FD989029       --> .............CTCCTTTTCATTCTTATGCAAGATAGGAAACAAGTAT
EY929618       --> ..................................................
EX757876       --> ..................................................

               751    -    801
UN20556        --> CTGAGTTCTTTAATCAATTTGCTTTCTTGGAGAACTGTTTTTTCGTTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ..................................................
FY432142       --> CTGAGTTCTTTAATCAATTTGCTTTCTTGGAGAACTGTTTTTTCGTTTCC
FD946723       --> CTGAGTTCTTTAATCAATTTGCTTTCTTGGAGAACTGTTTTTTCGTTTCC
EV549815       --> CTGAGTTCTTTAATCAATTTGCTTTCTTGGAGAACTGTTTTTTCGTTTCC
FD568857       --> CTGAGTTCTTTAATCAATTTGCTTTCTTGGAGAACTGTTTTTTCGTTTCC
FD947525       --> CTGAGTTCTTTAATCAATTTGCTTTCTTGGAGAACTGTTTTTTCGTTTCC
FD989029       --> CTGAGTTCTTTAATCAATTTGCTTTCTTGGAGAACTGTTTTTTCGTTTCC
EY929618       --> ..................................................
EX757876       --> ..................................................

               801    -    851
UN20556        --> ACATAGAGGAACTCAAGATTTTCTTGACCTCCAATGGATTCTGTTTCCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ..................................................
FY432142       --> ACATAGAGGAACTCAAGATTTTCTTGACCT....................
FD946723       --> ACATAGAGGAACTCAAGATTTTCTTGACCTCCAATGGATTCTGTTTCCCT
EV549815       --> ACATAGAGGAACTCAAGATTTTCTTGACCTCCAATGGATTCTGTTTCCCT
FD568857       --> ACATAGAGGAACTCAAGATTTTCTTGACCTCCAATGGATTCTGTTTCCCT
FD947525       --> ACATAGAGGAACTCAAGATTTTCTTGACCTCCAATGGATTCTGTTTCCCT
FD989029       --> ACATAGAGGAACTCAAGATTTTCTTGACCTTTAATGGATTCTGTTTCCCT
EY929618       --> ........................gGACCTCCAATGGATTCTGTTTCCCT
EX757876       --> ..................................................

               851    -    901
UN20556        --> TTCTGAGGTTACTGTCATGAGAAGAACACATTTGGGGTTTATGCACAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ..................................................
FY432142       --> ..................................................
FD946723       --> TTCTGAGGTTACTGTCATGAGAAGAACACATTTGGGGTTTATGCACAGTT
EV549815       --> TTCTGAGGTTACTGTCATGAGAAGAACACATTTGGGGTTTATGCACAGTT
FD568857       --> TTCTGAGGTTACTGTCATGAGAAGAACACATTTGGGGTTTATGCACAGTT
FD947525       --> TTCTGAGGTTACTGTCATGAGAAGAACACATTTGGGGTTTATGCACAGTT
FD989029       --> TTCTGAGGTTACTGTCATGAGAAGAACACATTTGGGGTTTATGCACAGTT
EY929618       --> TTCTGAGGTTACTGTCATGAGAAGAACACATTTGGGGTTTATGCACAGTT
EX757876       --> ............gGTCATGAGAAGAACACATTTGGGGTTTATGCACAGTT

               901    -    951
UN20556        --> TCAGGCAACCATTTTCTGGTGTTACAATATCTCCCAAGTTCTGCCACTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ..................................................
FY432142       --> ..................................................
FD946723       --> TCAGGCAACCATTTTCTGGTGTTACAATATCTCCCAAGTTCTGCCACTCC
EV549815       --> TCAGACAACCATTTTCTGGTGTTACAATATCTCCCAAGTTCTGCCACTCC
FD568857       --> TCAGGCAACCATTTTCTGGTGTTACAATATCTCCCAAGTTCTGCCACTCC
FD947525       --> TCAGGCAACCATTTTCTGGTGTTACAATATCTCCCAAGTTCTGCCACTCC
FD989029       --> TCAGGCAACCATTTTCTGGTGTTACAATATCTCCCAAGTTCTGCCACTCC
EY929618       --> TCAGACAACCATTTTCTGGTGTTACAATATCTCCCAAGTTCTACCACTCC
EX757876       --> TCAGACAACCATTTTCTGGTGTTACAATATCTCCCAAGTTCTGCCACTCC

               951    -   1001
UN20556        --> AAAGTTGTAGGATCAAGGGCAATGTCTTCAAGTGTTTCCAGTACAAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ..................................................
FY432142       --> ..................................................
FD946723       --> AAAGTTGTAGGATCAAGGGCAATGTCTTCAAGTGTTTCCAGTACAAAGAG
EV549815       --> AAAG------GATCAAGGGCAATGTCTTCAAGTGTTTCCAGTACAAAGAG
FD568857       --> AAAGTTGTAGGATCAAGGGCAATGTCTTCAAGTGTTTCCAGTACAAAGAG
FD947525       --> AAAGTTGTAGGATCAAGGGCAATGTCTTCAAGTGTTTCCAGTACAAAGAG
FD989029       --> AAAGTTGTAGGATCAAGGGCAATGTCTTCAAGTGTTTCCAGTACAAAGAG
EY929618       --> AAAGTTGTAGGATCAAGGGCAATGTCTTCAAGTGTTTCCAGTACAAAGAG
EX757876       --> AAAGTTGTAGGATCAAGGGCAATGTCTTCAAGTGTTTCCAGTACAAAGAG

               1001   -   1051
UN20556        --> CCAATATGTTTATGGAGAAAGCTTAGCTGCAACTGCAGATTCAGATTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ..................................................
FY432142       --> ..................................................
FD946723       --> CCAATATGTTTATGGAGAAAGCTTAGCTGCAACTGCAGATTCAGATTATA
EV549815       --> CTAATATGTTTATGGAGAAAGCTTAGCTGCAACTGCAGATTCGGATTATA
FD568857       --> CCAATATGTTTATGGAGAAAGCTTAGCTGCAACTGCAGATTCAGATTATA
FD947525       --> CCAATATGTTTATGGAGAAAGCTTAGCTGCAACTGCAGATTCAGATTATA
FD989029       --> CCAATATGTTTATGGAGAAAGCTTAGCTGCAACTGCAGATTCAGATTATA
EY929618       --> CCAATATGTTTATGGAGAAAGCTTAGCTGCAACTGCAGATTCAGATTATA
EX757876       --> CCAATATGTTTATGGAGAAAGCTTAGCTGCAACTGCAGATTCAGATTATA

               1051   -   1101
UN20556        --> AGATGAATGGATTAACCCTAAAAAACAGAATCAGTTCGGTTAAAGAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ..................................................
FY432142       --> ..................................................
FD946723       --> AGATGAATGGATTAACCCTAAAAAACAGAATCAGTTCGGTTAAAGAAAGA
EV549815       --> AGATGAATGGATTAACCCTAAAAAACAGAATCAGTTCTGTTAAAGAAAGA
FD568857       --> AGATGAATGGATTAACCCTAAAAAACAGAATCAGTTCGGTTAAAGAAAGA
FD947525       --> AGATGGATGGATTAACCCTAAAAAACAGAATCAGTTCGGTTAAAGAAAGA
FD989029       --> AGATGAATGGATTAACCCTAAAAAACAGAATCAGTTCGGTTAAAGAAAGA
EY929618       --> AGATGAATGGATTAACCCTAAAAAACAGAATCAGTTCTGTTAAAGAAAGA
EX757876       --> AGATGAATGGATTAACCCTAAAAAACAGAATCAGTTCTGTTAAAGAAAGA

               1101   -   1151
UN20556        --> TTTTTACTTGATGCTTTTGATGATGAGTATGGTGGAGTAGTAGTTGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ..................GATGATGAGTATGGTGGAGTAGTAGTTGATCA
FY432142       --> ..................................................
FD946723       --> TTTTTACTTGATGCTTTTGATGATGAGTATGGTGGAGTAGTAGTTGATCA
EV549815       --> TTATTACTTGATGCTTTTGATGATGAGTATGGTGGAGTAGTAGTTGATCA
FD568857       --> TTTTTACTTGATGCTTTTGATGATGAGTATGGTGGAGTAGTAGTTGATCA
FD947525       --> TTTTTACTTGATGCTTTTGATGATGAGTATGGTGGAGTAGTAGTTGATCA
FD989029       --> TTTTTACTTGATGCTTTTGATGATGAGTATGGTGGAGTAGTAGTTGATCA
EY929618       --> TTATTACTTGATGCTTTTGATGATGAGTATGGTGGAGTAGTAGTTGATCA
EX757876       --> TTATTACTTGATGCTTTTGATGATGAGTATGGTGGAGTAGTAGTTGATCA

               1151   -   1201
UN20556        --> TGAAAAATTACCATCAAACCCTAACGCTTTCACAGCAATGCTTAGAAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- TGACAAATTACCATCAAACCCTAACGCTTTCACAGCAATGCTTAGAAACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY432142       --> ..................................................  Raphanus sativus cv GSK3-1
FD946723       --> TGAAAAATTACCATCAAACCCTAACGCTTTCACAGCAATGCTTAGAAACT  Raphanus sativus cv Early Scarlet Globe
EV549815       --> TGACAAATTACCATCAAACCCTAACGCTTTCACAGCAATGCTTAGAAACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD568857       --> TGAAAAATTACCATCAAACCCTAACGCTTTCACAGCAATGCTTAGAAACT  Raphanus sativus cv Early Scarlet Globe
FD947525       --> TGAAAAATTACCATCAAACCCTAACGCTTTCACAGCAATGCTTAGAAACT  Raphanus sativus cv Early Scarlet Globe
FD989029       --> TGAAAAATTACCATCAAACCCTAACGCTTTCACAGCAATGCTTAGAAACT  Raphanus raphanistrum subsp. landra
EY929618       --> TGAAAAATTACCATCAAACCCTAACGCTTTCACAGCAATGCTTAGAAACT  Raphanus sativus var. oleiformis
EX757876       --> TGACAAATTACCATCAAACCCTACCGCTTTCACAGCAATGCTTAGAAACT  Raphanus raphanistrum subsp. raphanistrum (MS)

               1201   -   1251
UN20556        --> CTCTCTCGGATTGGAGAAGAAAGGGAAAGAAGGGAGTTTGGTTGAAGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- CTCTCTCGGATTGGAGAAGAAAGGGAAAGAAGGGAGTTTGGTTGAAGTTA
FY432142       --> ..................................................
FD946723       --> CTCTCTCGGATTGGAGAAGAAAGGGAAAGAAGGGAGTTTGGTTGAAGTTA
EV549815       --> CTCTCTCGGATTGGAGAAGAAAGGGAAAGAAGGGAGTTTGGTTGAAGTTA
FD568857       --> CTCTCTCGGATTGG....................................
FD947525       --> CTCTCTCGGATTGGAGAAGAAAGGGAAAGAAGGGAGTTTGGTTGAAGTTA
FD989029       --> CTCTCTCGGATTGGAGAAGAAAGGGAAAGAAGGGAGTTTGGTTGAAGTTA
EY929618       --> CTCTCTCGGATTGGAGAAGAAAGGGAAAGAAGGGAGTTTGGTTGAAGTTA
EX757876       --> CTCTCTCGGATTGGAGAAGAAAGGGAAAGAAGGGAGTTTGGTTGAAGTTA

               1251   -   1301
UN20556        --> CCTGTGGAACAATCTGAGTTAGTCCCAGTTGCTGTAAAGGAAGGATTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- CCTGTGGAACAATCTGAGTTAGTCCCAGTTGCTGTAAAGGAAGGATTTGA
FY432142       --> ..................................................
FD946723       --> CCTGTGGAACAATCTGAGTTAGTCCCAGTTGCTGTAAAGGAAGGATTTGA
EV549815       --> CCTGTGGAACAATCTGAGTTAGTCCCAGTTGCTGTAAAGGAAGGATTTGA
FD568857       --> ..................................................
FD947525       --> CCTGTGGAACAATCTGAGTTAGTCCCAGTTGCTGTAAAGGAAGGATTTGA
FD989029       --> CCTGTGGAACAATCTGAGTTAGTCCCAGTTGCTGTAAAGGAAGGATTTGA
EY929618       --> CCTGTGGAACAATCTGAGTTAGTCCCAGTTGCTGTAAAGGAAGGATTTGA
EX757876       --> CCTGTGGAACAATCTGAGTTAGTCCCAGTTGCTGTAAAGGAAGGATTTGA

               1301   -   1351
UN20556        --> ATATCATCATGCAGAGAAAGGATATGTGATGTTAACTTATTGGATACCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ATATCATCATGCAGAGAAAGGATATGTGATGTTAACTTATTGGATACCAG
FY432142       --> ..................................................
FD946723       --> ATATCATCATGCAGAGAAAGGATATGTGATGTTAACTTATTGGATACC..
EV549815       --> ATATCATCATGCAGAGAAAGGATATGTGATGTTAACTTATTGGATACCAG
FD568857       --> ..................................................
FD947525       --> ATATCATCATGCAGAGAAAGGATATGTGATGTTAACTTATTGGATACCA.
FD989029       --> ATATCATCATGCAGAGAAAGGATATGTGATGTTAACTTATTGGATACCAG
EY929618       --> ATATCATCATGCAGAGAAAGGATATGTGATGTTAACTTATTGGATACCAG
EX757876       --> ATATCATCATGCAGAGAAAGGATATGTGATGTTAACTTATTGGATACCAG

               1351   -   1401
UN20556        --> AGGAGGAGCCTTGTATGCTTCCTGGAAATGCTTCACATCAAGTTGGTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- AGGAGGAGCCTTGTATGCTCCCTGGAAATGCTTCACATCAAGTTGGTGTT
FY432142       --> ..................................................
FD946723       --> ..................................................
EV549815       --> AGGAGGAGCCTTGTATGCTCCCTGGAAATGCTTCACATCAAGTTGGTGTT
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> AGGAGGAGCCTTGTATGCTTCCTGGAA-TGCTTCACATCAAGT-GGTGTT
EY929618       --> AGGAGGAGCCTTGTATGCTTCCTGGAAATGCTTCACATCAAGTTGGTGTT
EX757876       --> AGGAGGAGCCTTGTATGCTTCCTGGAAATGCTTCACATCAAGTTGGTGTT

               1401   -   1451
UN20556        --> GGAGGCTTTGTCTTGAACCAATATAAAGAGGTGCTTGTGGTGCAAGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- GGAGGCTTTGTCTTGAACCAATATAAAGAGGTGCTTGTGGTGCAAGAAAA
FY432142       --> ..................................................
FD946723       --> ..................................................
EV549815       --> GGAGGCTTTGTCTTGAACCAATATAAAGAGGTGCTTGTGGTGCAAGAAA-
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> GGAGGCTTTGT-TTG-ACC-ATATAAAGAGGTGCTTGTGG..........
EY929618       --> GGAGGCTTTGTCTTGAACCAATATAAAGAGGTGCTTGTGGTGCAAGAAAA
EX757876       --> GGAGGCTTTGTCTTGAATCAATTTAAAGAGGTACTTGTGGTGCAAGAAAA

               1451   -   1501
UN20556        --> GTATTGTACTTCATCGAATACAGGTCTATGGAAATTGCCAACTGGATTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- GTATTGTACTTCATCGAATACAGGTCTATGGAAATTGCCAACTGGATTTA
FY432142       --> ..................................................
FD946723       --> ..................................................
EV549815       --> GTATTGTACTTCATCGAA................................
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> ..................................................
EY929618       --> GTATTGTACTTCA.....................................
EX757876       --> GTATTGTACTTCATCAAATA..............................

               1501   -   1551
UN20556        --> TTAATGAATCAGAAGAGATCTTCTCTGGAGCCGTAAGAGAAGTCAAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- TTAATGAATCAGAAGAGATCTTCTCTGGAGCCGTAAGAGAAGTCAAGGAA
FY432142       --> ..................................................
FD946723       --> ..................................................
EV549815       --> ..................................................
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> ..................................................
EY929618       --> ..................................................
EX757876       --> ..................................................

               1551   -   1601
UN20556        --> GAAACTGGGGTGGATACAGATTTCTTAGAGGTTATAGCTTTCAGACATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- GAAACTGGGGTGGATACAGATTTCTTAGAGGTTATAGCTTTCAGACATGC
FY432142       --> ..................................................
FD946723       --> ..................................................
EV549815       --> ..................................................
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> ..................................................
EY929618       --> ..................................................
EX757876       --> ..................................................

               1601   -   1651
UN20556        --> ACACAACGTCGCATTTGAGAAGTCTGATCTGTTCTTCATCTGTATGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ACACAACGTCGCATTTGAGAAGTCTGATCTGTTCTTCATCTGTATGTTGA
FY432142       --> ..................................................
FD946723       --> ..................................................
EV549815       --> ..................................................
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> ..................................................
EY929618       --> ..................................................
EX757876       --> ..................................................

               1651   -   1701
UN20556        --> AATATGTGAAGCGAGATTAAGACATCGTTACTGTGGTCTTTCTCCTCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- AATATGTGAAGCGAGATTAAGACATCGTTACTGTGGTCTTTCTCCTCATC
FY432142       --> ..................................................
FD946723       --> ..................................................
EV549815       --> ..................................................
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> ..................................................
EY929618       --> ..................................................
EX757876       --> ..................................................

               1701   -   1751
UN20556        --> GACTTGTCTCTGCTTTTGATGGCAGACCTTCTTCTCTCTACTACAACGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- GACTTGTCTCTGCTTTTGATGGCAGACCTTCTTCTCTCTACTACAACGTT
FY432142       --> ..................................................
FD946723       --> ..................................................
EV549815       --> ..................................................
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> ..................................................
EY929618       --> ..................................................
EX757876       --> ..................................................

               1751   -   1801
UN20556        --> GTTGATGATGATCCTTCCCACTCCAACTGTACAGCTGAATTTTATTAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- GTTGATGATGATCCTTCCCACTCCAACTGTACAGCTGAATTTTATTAATA
FY432142       --> ..................................................
FD946723       --> ..................................................
EV549815       --> ..................................................
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> ..................................................
EY929618       --> ..................................................
EX757876       --> ..................................................

               1801   -   1851
UN20556        --> ACCGGATCAAACCGGACCGGAACAAAAGTCAAGTGGTAAGATTCTGTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- ACCGGATCAAACCGGACCGGAACAAAAGTCAAGTGGTAAGATTCTGTGTA
FY432142       --> ..................................................
FD946723       --> ..................................................
EV549815       --> ..................................................
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> ..................................................
EY929618       --> ..................................................
EX757876       --> ..................................................

               1851   -   1901
UN20556        --> TATATAATTCCATGTAATGAATGTTGTTATTTGAACACTCTTCGGTAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- TATATAATTCCATGTAATGAATGTTGTTATTTGAACACTCTTCGGTAAAG
FY432142       --> ..................................................
FD946723       --> ..................................................
EV549815       --> ..................................................
FD568857       --> ..................................................
FD947525       --> ..................................................
FD989029       --> ..................................................
EY929618       --> ..................................................
EX757876       --> ..................................................

               1901   -   1951
UN20556        --> TAAATACTAGTAATAGCGCCT
                   ~~~~~~~~~~~~~~~~~~~~~
EV545210       <-- TAAATACTAGTAATAGCGCCT
FY432142       --> .....................
FD946723       --> .....................
EV549815       --> .....................
FD568857       --> .....................
FD947525       --> .....................
FD989029       --> .....................
EY929618       --> .....................
EX757876       --> .....................