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Alignment for radish unigene UN20629

               1      -     51
UN20629        --> GGAGAGTACATCGTAACGACCAACGAGGAAAAAATAACTCGAGAGAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- ..................................................
FD546326       <-- ..................................................
EY926273       <-- ..................................................
EV572860       <-- ..................................................
EX776411       <-- ..................................................
EV568052       --> GGAGAGTACATCGTAACGACCAACGAGGAAAAAATAACTCGAGAGAGAGA
FD550354       --> .............ggACGACCAACGAGGAAAAAATAACTCGAGAGAGAGA
EX772473       --> ...................ggAACGAGGAAAAAATAACTCGAGAGAGAGA
EV527184       --> ...........................gggaacgaggaaaaaaataactc
FD946593       --> ..............................ggaccaacgaggaaaaaata
EY929963       --> ..................................................

               51     -    101
UN20629        --> GAGAGAGAGAGAGAGAGAGAGAG--TAATGGAGAAGATTGTTAAGGTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- ..................................................
FD546326       <-- ..................................................
EY926273       <-- ..................................................
EV572860       <-- ..................................................
EX776411       <-- ..................................................
EV568052       --> GAGAGAGAGAGAGAGAGAGAGAG--TAATGGAGAAGATTGTTAAGGTAGC
FD550354       --> GAGAGAGAGAGAGAGAGAGAGAGAGTAATGGAGAAGATTGTTAAGGTAGC
EX772473       --> GAGAGAGAGAGAGAGAGAGAGAG--TAATGGAGAAGATTGTTAAGGTAGC
EV527184       --> GAGAGAGAGAGAGAGAGAGAGAG--TAATGGAGAAGATTGTTAAGGTAGC
FD946593       --> actcGAGAGAGAGAGAGAGAGAG--TCATGGAGAAGATTGTTAAGGTAGT
EY929963       --> ........................................TTAAGGTAGC

               101    -    151
UN20629        --> TTATGACGCATCCGTGAAGACAGTTTTAACACTGTTGGAGAAGAATCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- ..................................................
FD546326       <-- ..................................................
EY926273       <-- ..................................................
EV572860       <-- ..................................................
EX776411       <-- ..................................................
EV568052       --> TTATGACGCATCCGTGAAGACAGTTTTAACACTGTTGGAGAAGAATCTTT
FD550354       --> TTATGACGCATCCGTGAAGACAGTTTTAACACTGTTGGAGAAGAATCTTT
EX772473       --> TTATGACGCATCCGTGAAGACAGTTTTAACACTGTTGGAGAAGAATCTTT
EV527184       --> TTATGACGCATCCGTGAAGACAGTTTTAACACTGTTGGAGAAGAATCTTT
FD946593       --> TTATGACGCATCCGTGAAGACAGTTTTAACACTGTTGGAGAAGAATCTTT
EY929963       --> TTATGACGCATCCGTGAAGACAGTTTTAACACTGTTGGAGAAGAATCTTT

               151    -    201
UN20629        --> TACCAGATGTTGTCATAAGGCGGTTGACGCGTCTGCTTCTCGCCGGTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- ..................................................
FD546326       <-- ..................................................
EY926273       <-- ..................................................
EV572860       <-- ..................................................
EX776411       <-- ..................................................
EV568052       --> TACCAGATGTTGTCATAAGGCGGTTGACGCGTCTGCTTCTCGCCGTTCGA
FD550354       --> TACCAGATGTTGTCATAAGGCGGTTGACGCGTCTGCTTCTCGCCGGTCGA
EX772473       --> TACCAGATGTTGTCATAAGGCGGTTGACGCGTCTGCTTCTCGCCGGTCGA
EV527184       --> TACCAGATGTTGTCATAAGGCGGTTGACGCGTCTGCTTCTCGCCGGTCGA
FD946593       --> TACCAAATGTTGTCATAAGGCGGTTGACGCGTCTGCTTCTCGCCGGTCGA
EY929963       --> TACCAAATGTTGTCATAAGGCGGTTGACGCGTCTGCTTCTCGCCGGTCGA

               201    -    251
UN20629        --> CTTCGTTCCGGTTACAAACCCACGGCGGATCTGCAACTTTCCGATCTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- ..................................................
FD546326       <-- ..................................................
EY926273       <-- ..................................................
EV572860       <-- ..................................................
EX776411       <-- ..................................................
EV568052       --> CTTCGTTCCGGTTACAAACCCACGGCGGATCTGCAACTTTCCGATCTCCT
FD550354       --> CTTCGTTCCGGTTACA--GCCACGGCGGATCTGCAACTTTCCGATCTCCT
EX772473       --> CTTCGTTCCGGTTACAAACCCACGGCGGATCTGCAACTTTCCGATCTCCT
EV527184       --> CTTCGTTCCGGTTACAAACCCACGGCGGATCTGCAACTTTCCGATCTCCT
FD946593       --> CTTCGTTCCGGTTACAAACCCACGGCGGATCTGCAACTTTCCGATCTCCT
EY929963       --> CTTCGTTCCGGTTACAAACCCACGGCGGATCTGCAACTTTCCGATCTCCT

               251    -    301
UN20629        --> CCGTTTCGTCAACGCTATAAAAGAGATGCCTATAGCGATCAACACCGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- ..................................................
FD546326       <-- ..................................................
EY926273       <-- ..................................................
EV572860       <-- ..................................................
EX776411       <-- ..................................................
EV568052       --> CCGTTTCGTCAACGCTATAAAAGAGATGCCTATAGCGATCAACACCGAGA
FD550354       --> CCGTTTCGTCAACGCTATAAAAGAGATGCCTATAGCGATCAACACCGAGA
EX772473       --> CCGTTTCGTCAACGCTATAAAAGAGATGCCTATAGCGATCAACACCGAGA
EV527184       --> CCGTTTCGCCAACGCTATAAAAGAGATGCCTATAGCGATCAACACCGAGA
FD946593       --> CCGTTTCGTCAACGCTATAAAAGAGATGCCTATAGCGATCAACACCGAGA
EY929963       --> CCGTTTCGTCAACGCTATAAAAGAGATGCCTATAGCGATCAACACCGAGA

               301    -    351
UN20629        --> AGCCAAAGACTCAACACTATGAATTACCAACAGCTTTCTTCGAGCTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- ..................................................
FD546326       <-- ..................................................
EY926273       <-- ..................................................
EV572860       <-- ..................................................
EX776411       <-- ..................................................
EV568052       --> AGCCAAAGACTCAACACTATGAATTACCAACAGCTTTCTTCGAGCTTGTT
FD550354       --> AGCCAAAGACTCAACACTATGAATTACCAACAGCTTTCTTCGAGCTTGTT
EX772473       --> AGCCAAAGACTCAACACTATGAATTACCAACAGCTTTCTTCGAGCTTGTT
EV527184       --> AGCCAAAGACTCAACACTATGAATTACCAACAGCTTTCTTCGAGCTTGTT
FD946593       --> AGCCAAAGACTCAACACTATGAATTAC-AACAGCTTTCTTCGAGCTTGTT
EY929963       --> AGCCAAAGACTCAACACTATGAATTACCAACAGCTTTCTTCGAGCTTGTT

               351    -    401
UN20629        --> CTTGGAAGAAACATGAAATACAGCTCTTGCTACTTCTCTAACGATTCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- ....................CAGCTCTTGCTACTTCTCTAACGATTCAAG
FD546326       <-- ..................................................
EY926273       <-- ..................................................
EV572860       <-- ..................................................
EX776411       <-- ..................................................
EV568052       --> CTTGGAAGAAACATGAAATACAGCTCTTGCTACTTCTCTAACGATTCAAG
FD550354       --> CTTGGAAGAAACATGAAATACAGCTCTTGCTACTTCTCTAACGATTCAAG
EX772473       --> CTTGGAAGAAACATGAAATACAGCTCTTGCTACTTCTCTAACGATTCAAG
EV527184       --> CTTGGAAGAAACATGAAATACAGCTCTTGCTACTTCTCTAACGATTCAAG
FD946593       --> CTTGGAAGAAACATGAAATACAGCTCTTGCTACTTCTCTAACGATTCAAG
EY929963       --> CTTGGAAGAAACGTGAAATACAGCTCTTGCTACTTCTCTAACGATTCAAG

               401    -    451
UN20629        --> TAGCCTAGAAGATGCAGAGGAAGCAATGCTGGCTCTATATTGCCAGAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- TAGCCTAGAAGATGCAGAGGAAGCAATGCTGGCTCTATATTGCCAGAGGG
FD546326       <-- ......AGAAGATGCAGAGGAAGCAATGCTG-CTCTATAT-GCCAGAGGG
EY926273       <-- ..................................................
EV572860       <-- ..................................................
EX776411       <-- ..................................................
EV568052       --> TAGCCTAGAAGATGCAGAGGAAGCAATGCTGGCTCTATATTGCCAGAGGG
FD550354       --> TAGCCTAGAAGATGCAGAGGAAGCAATGCTGGCTCTATATTGCCAGAGGG
EX772473       --> TAGCCTAGAAGATGCAGAGGAAGCAATGCTGGCTCTATATTGCCAGAGGG
EV527184       --> TAGCCTAGAAGATGCAGAGGAAGCAATGCTGGCTCTATATTGCCAGAGGG
FD946593       --> TAGCCTAGAAGATGCAGAGGAAGCAATGCTAGCTCTATATTGCCAGAGGG
EY929963       --> TAGCCTAGAAGATGCAGAGGAAGCAATGCTAGCTCTATATTGCCAGAGGG

               451    -    501
UN20629        --> CTAAAGTGGAAGATGGACAGAGTGTTCTTGATGTCGGATGTGGCTGGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- CTAAAGTGGAAGATGGACAGAGTGTTCTTGATGTCGGATGTGGCTGGGGA
FD546326       <-- CTAAAGTGGAAGATG-ACAGAGTGTTCTTGATGTCGGATGTGGCTGGGGA
EY926273       <-- ..................................................
EV572860       <-- ..................................................
EX776411       <-- ..................................................
EV568052       --> CTAAAGTGGAAGATGGACAGAGTGTTCTTGATGTCGGATGTGGCTGGGGA
FD550354       --> CTAAAGTGGAAGATGGACAGAGTGTTCTTGATGTCGGATGTGGCTGGGGA
EX772473       --> CTAAAGTGGAAGATGGACAGAGTGTTCTTGATGTCGGATGTGGCTGGGGA
EV527184       --> CTAAAGTGGAAGATGGACAGAGTGTTCTTGATGTCGGATGTGGCTGGGGA
FD946593       --> CTAAAGTGGAAGATGGACAGAGTGTTCTTGATGTCGGATGTGGCTGGGGA
EY929963       --> CTAAAGTGGAAGATGGACAGAGTGTTCTTGATGTCGGATGTGGCTGGGGA

               501    -    551
UN20629        --> TCTTTGTCCTTGTACATTGCCCGCAAGTACAGCAACTGCAAGATAACAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- TCTTTGTCCTTGTACATTGCCCGCAAGTACAGCAACTGCAAGATAACAGG
FD546326       <-- TCTTTGTCCTTGTACATTGCCCGCAAGTACAGCAACTGCAAGATAACAGG
EY926273       <-- ..................................................
EV572860       <-- ..................................................
EX776411       <-- ..................................................
EV568052       --> TCTTTGTCCTTGTACATTGCCCGCAAGTACAGCAACTGCAAGATAACAGG
FD550354       --> TCTTTGTCCTTGTACATTGCCCGCAAGTACAGCAACTGCAAGATAACAGG
EX772473       --> TCTTTGTCCTTGTACATTGCCCGCAAGTACAGCAACTGCAAGATAACAGG
EV527184       --> TCTTTGTCCTTGTACATTGCCCGCAAGTACAGCAACTGCAAGATAACAGG
FD946593       --> CCTTTGTCCTCGTACATTGCCCGCAAGTACAGCAACTGCAAGATAACAGG
EY929963       --> TCTTTGTCCTTGTACATTGCCCGCAAGTACAGCAACTGCAAGATAACAGG

               551    -    601
UN20629        --> TCTCTGCAACTCAAAAACACAGAAAGCATTCATCGAGGAGCAATGCTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- TCTCTGCAACTCAAAAACACAGAAAGCATTCATCGAGGAGCAATGCTGGA
FD546326       <-- TCTCTGCAACTCAAAAACACAGAAAGCATTCATCGAGGAGCAATGCTGGA
EY926273       <-- ..................................................
EV572860       <-- ..................................................
EX776411       <-- ..................................................
EV568052       --> TCTCTGCAACTCAAAAACACAGAAAGCATTCATCGAGGAGCAATGCTGGA
FD550354       --> TCTCTGCAACTCAAAAACACAGAAAGCATTCATCGAGGAGCAATGCTGGA
EX772473       --> TCTCTGCAACTCAAAAACACAGAAAGCATTCATCGAGGAGCAATGCTGGA
EV527184       --> TCTCTGCAACTCAAAAACACAGAAAGCATTCATCGAGGAGCAATGCTGGA
FD946593       --> TCCCTGCAACTCAAAAACACAGAAAGCATTCATCGAGGAGCAATGCTGGA
EY929963       --> TCTCTGCAACTCAAAAACACAGAAAGCATTCATCGAGGAGCAATGCTGGA

               601    -    651
UN20629        --> AACGTGGGATTCAAAATATCGAAATAATGGTTGGAGATATTAGCACATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- AACGTGGGATTCAAAATATCGAAATAATGGTTGGAGATATTAGCACATTT
FD546326       <-- AACGTGGGATTCAAAATATCGAAATAATGGTTGGAGATATTAGCAAATTT
EY926273       <-- AACGTGGGATTCAAAATATCGAAATAATGGTTGGAGATATTAGCACATTT
EV572860       <-- ..................................AGATATTAGCACATTT
EX776411       <-- ..................................................
EV568052       --> AACGTGGGATTCAAAATATCGAAATAATGGTTGGAGATATTAGCACATTT
FD550354       --> AACGTGGGATTCAAAATATCGAAATAATGGTTGGAGATATTAGCAAATTT
EX772473       --> AACGTG--ATTCAAAATATCGAAATAATGGTTGGAGATATTAGCACATTT
EV527184       --> AACGTGGGATTCAAAATATCGAAATAATGGTTGGAGATATTAGCACATTT
FD946593       --> AACGTGGGATTCAAAATATCGAAATAATGGTTGGAGATATTAGCACATTT
EY929963       --> AACGTGGGATTCAAAATATCGAAATAATGGTTGGAGATATTAGCACATTT

               651    -    701
UN20629        --> GAGCATGAAGGGACATATGACCGAGTATTCTCCATCGAAATGTTCGAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- GAGCATGAAGGGACATATGACCGAGTATTCTCCATCGAAATGTTCGAGCA  Raphanus raphanistrum subsp. maritimus
FD546326       <-- GAGCATGAAGGGACATACGACCGAGTATTCTCCATCGAAATGTTCGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY926273       <-- GAGCATGAAGGGACATACGACCGAGTATTCTCCATCGAAATGTTCGAGCA  Raphanus sativus var. oleiformis
EV572860       <-- GAGCATGAAGGGACATATGACCGAGTATTCTCCATCGAAATGTTCGAGCA  Raphanus raphanistrum subsp. landra
EX776411       <-- ..................................TCGAAATGTTCGAGCA  Raphanus raphanistrum subsp. landra
EV568052       --> GAGCATGAAGGGACATATGACCGAGTATTCTCCATCGAAATGTTCGAGCA  Raphanus raphanistrum subsp. landra
FD550354       --> GAGCATG...........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772473       --> GAGCATGAAGGGACATATGACCGAGTATTCTCCATCGAAATGTTCGAGCA  Raphanus raphanistrum subsp. landra
EV527184       --> GAGCATGAAGGGACATATGACCGAGTATTCTCCATCGAAATGTTCGAGCA  Raphanus raphanistrum subsp. maritimus
FD946593       --> GAGCATGAAGGGACATACGACCGAGTATTCTCCATCGAAATGTTCGAGCA  Raphanus sativus cv Early Scarlet Globe
EY929963       --> GAGCATGAAGGGACATACGACCGAGTATTCTCCATCGAAATGTTCGAGCA  Raphanus sativus var. oleiformis

               701    -    751
UN20629        --> TATGAAAAACTATGGGGAGCTTCTGAAGAAAATTGGAAAGTGGATGAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- TATGAAAAACTATGGGGAGCTTCTGAAGAAAATTGGAAAGTGGATGAAGG
FD546326       <-- TATGAAAAACTATGGGGAGCTTCTGAAGAAAATTGGAAAGTGGATGAAGG
EY926273       <-- TATGAAAAACTATGGGGAGCTTCTGAAGAAAATTGGAAAGTGGATGAAGG
EV572860       <-- TATGAAAAACTATGGGGAGCTTCTGAAGAAAATTGGAAAGTGGATGAAGG
EX776411       <-- TATGAAAAACTATGGGGAGCTTCTGAAGAAAATTGGAAAGTGGATGAAGG
EV568052       --> TATGAAAAACTATGGGGAGCTTCTGAAGAAAATTGGAAAGTGGATGAA..
FD550354       --> ..................................................
EX772473       --> TATGAAAA-CTATGGGGAGCTTCTGA-G-AAATTGGAAAGTGGAT.....
EV527184       --> TATGAAAAACTATGGGGAGCTTCTGAAGAAAATTGGAAAGTGGAT.....
FD946593       --> TATGAAAAACTATGGGGAGCTTCTGAAGAAAATTGGAAAGTGGATGAAGG
EY929963       --> TATGAAAAACTATGGGGAGCTTCTGAAGAAAATTGGAAAGTGGATGAAAG

               751    -    801
UN20629        --> AAGATGGTCTTCTGTTTGTTCACTATTTCTGCCATAAGACATTTGCTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- AAGATGGTCTTCTGTTTGTTCACTATTTCTGCCATAAGACATTTGCTTAC
FD546326       <-- AAGATGGTCTTCTGTTTGTTCACTATTTCTGCCATAAGACATTTGCTTAC
EY926273       <-- AAGATGGTCTTCTGTTTGTTCACTATTTCTGCCATAAGACATTTGCTTAC
EV572860       <-- AAGATGGTCTTCTGTCTGTTCACTATTTCTGCCATAAGACATTTGCTTAC
EX776411       <-- AAGATGGTCTTCTGTTTGTTCACTATTTCTGCCATAAGACATTTGCTTAC
EV568052       --> ..................................................
FD550354       --> ..................................................
EX772473       --> ..................................................
EV527184       --> ..................................................
FD946593       --> A-GATGGTCTTCTGTTTGTTCACTATTTCTGC-ATAAGACATTTGCTTAC
EY929963       --> AAGATGGTCTTCTGTTTGTTCACTATTTCTGCCATAAGACATTTGCTTAC

               801    -    851
UN20629        --> CACTTTGAGGATGTGAATGACGATGACTGGATCACAAGACACTTCTTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- CACTTTGAGGATGTGAATGACGATGACTGGATCACAAGACACTTCTTCAG
FD546326       <-- CACTTTGAGGATGTGAATGACGATGACTGGATCACAAGACACTTCTTCAG
EY926273       <-- CACTTTGAGGATGTGAATGACGATGACTGGATCACAAGACACTTCTTCAG
EV572860       <-- CACTTTGAGGATGTGAATGACGATGACTGGATCACAAGACACTTTTTCAG
EX776411       <-- CACTTTGAGGATGTGAATGACGATGACTGGATCACAAGACACTTCTTCAG
EV568052       --> ..................................................
FD550354       --> ..................................................
EX772473       --> ..................................................
EV527184       --> ..................................................
FD946593       --> -ACTTTGAG-ATGTGA-TGACGATGACTGGATCACA-GACACTTCTTCAG
EY929963       --> a.................................................

               851    -    901
UN20629        --> TGGAGGAACAATGCCATCAGCAAATCTTCTCCTCTACTTCCAAGAAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- TGGAGGAACAATGCCATCAGCAAATCTTCTCCTCTACTTCCAAGAAGATG
FD546326       <-- TGGAGGAACAATGCCATCAGCAAATCTTCTCCTCTACTTCCAAGAAGATG
EY926273       <-- TGGAGGAACAATGCCATCAGCAAATCTTCTCCTCTACTTCCAAGAAGATG
EV572860       <-- TGGAGGAACAATGCCATCAGCAAAT-TTTTCCTCTACTTCCAAGAAGATG
EX776411       <-- TGGAGGAACAATGCCATCAGCAAATCTTCTCCTCTACTTCCAAGAAGATG
EV568052       --> ..................................................
FD550354       --> ..................................................
EX772473       --> ..................................................
EV527184       --> ..................................................
FD946593       --> TGGAGGA-C-ATG-CATCAGCAAt..........................
EY929963       --> ..................................................

               901    -    951
UN20629        --> TTGCGATTGTGGATCATTGGCTACTAAATGGGAAGCATTATGCAAATACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- TTGCGATTGTGGATCATTGGCTACTAAATGGGAAGCATTATGCAAATA--
FD546326       <-- TTGCGATTGTGGATCATTGGCTACTAAATGGGAAGCATTATGCAAATACC
EY926273       <-- TTGCGATTGTGGATCATTGGCTACTAAATGGGAAGCATTATGCAAATACC
EV572860       <-- TTGCGATTGTGGATCATTGGCTACTAAATGGGAAGCATTATGCAAATACC
EX776411       <-- TTGCGATTGTGGATCATTGGCTACTAAATGGGAAGCATTATGCAAATA--
EV568052       --> ..................................................
FD550354       --> ..................................................
EX772473       --> ..................................................
EV527184       --> ..................................................
FD946593       --> ..................................................
EY929963       --> ..................................................

               951    -   1001
UN20629        --> AGTGAAGAGTGGCTGAAAAGAATGGACAAGGAGAGAGTTGCGATAAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- ---CCAGAGTGGCTGAAAAGAATGGACAAGGAGAGAGTTGCGATAAAGGA
FD546326       <-- AGTGAAGAGTGGCTGAAAAGAATGGACAAGGAGAGAGTTGCGATAAAGGA
EY926273       <-- AGTGAAGAGTGGCTGAAAAGAATGGACAAGGAGATAGTTGCAATAAAGGA
EV572860       <-- AGTGAAGAGTGGCTGAAAAGAATGGACAAGGAGAGAGTTGCGATAAAGGA
EX776411       <-- ---CCAGAGTGGCTGAAAAGAATGGACAAGGAGAGAGTTGCGATAAAGGA
EV568052       --> ..................................................
FD550354       --> ..................................................
EX772473       --> ..................................................
EV527184       --> ..................................................
FD946593       --> ..................................................
EY929963       --> ..................................................

               1001   -   1051
UN20629        --> GATAATGGAAATGACTTATGGGAAAGAGGAGGCAGTGAAGTGGACGGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- GATAATGGAAATGACTTATGGGAAAGAGGAGGCAGTGAAGTGGACGGTTT
FD546326       <-- GATAATGGAAATGACTTATGGGAAAGAGGAGGCAGTGAAGTGGACGGTTT
EY926273       <-- GATAATGGAAATGACTTATGGGAAAGAGGAGGCAGTGAAGTGGACGGTTT
EV572860       <-- GATAATGGAAATGACTTATGGGAAAGAGGAGGCAGTGAAGTGGACGGTTT
EX776411       <-- GATAATGGAAATGACTTATGGGAAAGAGGAGGCAGTGAAGTGGACGGTTT
EV568052       --> ..................................................
FD550354       --> ..................................................
EX772473       --> ..................................................
EV527184       --> ..................................................
FD946593       --> ..................................................
EY929963       --> ..................................................

               1051   -   1101
UN20629        --> ACTGGAGAACCTTCTTCATCGCGGTTGCTGAGCTTTTTGGATACAACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- ACTGGAGAACCTTCTTCATCGCGGTTGCTGAGCTTTTTGGATACAACAAT
FD546326       <-- ACTGGAGAACCTTCTTCATCGCGGTTGCTGAGCTTTTTGGATACAACAAT
EY926273       <-- ACTGGAGAACCTTCTTCATCGCGGTTGCCGAGCTTTTTGGATACAACAAT
EV572860       <-- ACTGGAGAACCT......................................
EX776411       <-- ACTGGAGAACCTTCTTCATCGCGGTTGCTGAGCTTTTTGGATACAACAAT
EV568052       --> ..................................................
FD550354       --> ..................................................
EX772473       --> ..................................................
EV527184       --> ..................................................
FD946593       --> ..................................................
EY929963       --> ..................................................

               1101   -   1151
UN20629        --> GGAGAAGAGTGGATGGTTTCACACTTCTTGTTCAAGAAGAAGTGATTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- GGAGAAGAGTGGATGGTTTCACACTTCTTGTTCAAGAAGAAGTGATTTAC
FD546326       <-- GGAGAAGAGTGGATGGTTTCACACTTCTTGTTCAAGAAGAAGTGATT-AC
EY926273       <-- GGAGAAGAGTGGATGGTCTCACACTTCTTGTTCAAGAAGAAGTGATTTAC
EV572860       <-- ..................................................
EX776411       <-- GGAGAAGAGTGGATGGTTTCACACTTCTTGTTCAAGAAGAAGTGATTTAC
EV568052       --> ..................................................
FD550354       --> ..................................................
EX772473       --> ..................................................
EV527184       --> ..................................................
FD946593       --> ..................................................
EY929963       --> ..................................................

               1151   -   1201
UN20629        --> ATATCTTTCTTCTCTTATTTATCAGTTCTTGAAATTTCGTGTGCCAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- ATATCTTTCTTCTCTTATTTATCAGTTCTTGAAATTTCGTGTGCCAAAAA
FD546326       <-- ATTTCTTCCTTCTCTTATTTATCAGTTCTTGAAATTTCGTGTGCCAAAAA
EY926273       <-- ATATCTTTCTTCTCTTATTTATCAGTTCTTGAAATTTCGTGTGCC.....
EV572860       <-- ..................................................
EX776411       <-- ATATCTTTCTTTTCTTATTTATCAGTTCTTGAAATTTCGTGTGCCAAAAA
EV568052       --> ..................................................
FD550354       --> ..................................................
EX772473       --> ..................................................
EV527184       --> ..................................................
FD946593       --> ..................................................
EY929963       --> ..................................................

               1201   -   1251
UN20629        --> TAAAGAATACTACAACATTCTGCTTCTAGTATGTTTTCCTATTTTTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- TAAAGAATACTACAACATTCTGCTTCTAGTATGCTTTCCTATTTTTTTaa
FD546326       <-- TAAAGAATACTACAACATTCTGCTTCTAGTATGTTTTCCTATTTTTTTTT
EY926273       <-- ..................................................
EV572860       <-- ..................................................
EX776411       <-- ..................................................
EV568052       --> ..................................................
FD550354       --> ..................................................
EX772473       --> ..................................................
EV527184       --> ..................................................
FD946593       --> ..................................................
EY929963       --> ..................................................

               1251   -   1301
UN20629        --> TTTAAAAAAGTTGCTCAATTTGGGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531491       <-- aaaaaagttgctc..............
FD546326       <-- TTTAAAAAAGTTGCTCAATTTGGGATC
EY926273       <-- ...........................
EV572860       <-- ...........................
EX776411       <-- ...........................
EV568052       --> ...........................
FD550354       --> ...........................
EX772473       --> ...........................
EV527184       --> ...........................
FD946593       --> ...........................
EY929963       --> ...........................