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Alignment for radish unigene UN20635

               -4     -     46
UN20635        --> .....CTAGTACCACTGCCGAGTTGCGCCGCGAACATTTTATATATCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530671       <-- ..................................................
FD531471       <-- ..................................................
EX761472       <-- ..................................................
FD966817       <-- ..................................................
FD538322       <-- ..................................................
EY903503       <-- ..................................................
FD535914       --> ggaccCTAGTACCACTGCCGAGTTGCGCCGCGAACATTTTATATATCTTT
FD542191       --> ...ggCTAGTACCACTGCCGAGTTGCGCCGCGAACATTTTATATATCTTT
EV526105       --> ........ggACCACTGCCGAGTTGCGCCGCGAACATTTTATATATCTTT
EX755342       --> .................CCGAGTTGCGCCGCGAACATTTTATATATCTTT
EX758029       --> ..................................................
EY907609       --> ..................................................
FD970459       --> ..................................................

               46     -     96
UN20635        --> CATCTGCTCTCGCAAGAAGCTGTTAGTGGCAGTTTCAATCGGAGAAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530671       <-- ..................................................
FD531471       <-- ..................................................
EX761472       <-- ..................................................
FD966817       <-- ..................................................
FD538322       <-- ..................................................
EY903503       <-- ..................................................
FD535914       --> CATCTGCTCTCGCAAGAAGCTGTTAGTGGCAGTTTCAATCGGAGAAGATG
FD542191       --> CATCTGCTCTCGCAAGAAGCTGTTAGCGGCAGTTTCAATCGGAGAAGATG
EV526105       --> CATCTGCTCTCGCAAGAAGCTGTTAGTGGCAGTTTCAATCGGAGAAGATG
EX755342       --> CATCTGCTCTCGCAAGAAGCTGTTAGTGGCAGTTTCAATCGGAGAAGATG
EX758029       --> ..................................................
EY907609       --> ..................................................
FD970459       --> ..................................................

               96     -    146
UN20635        --> AAGTTCAACGTCGCGAATCCTACCACTGGTTGCCAGAAGAAGCTCGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530671       <-- ..................................................
FD531471       <-- ..................................................
EX761472       <-- ..................................................
FD966817       <-- ..................................................
FD538322       <-- ..................................................
EY903503       <-- ..................................................
FD535914       --> AAGTTCAACGTCGCGAATCCTACCACTGGTTGCCAGAAGAAGCTCGAGAT
FD542191       --> AAGTTCAACGTCGCGAATCCTACCACTGGTTGCCAGAAGAAGCTCGAGAT
EV526105       --> AAGTTCAACGTCGCGAATCCTACCACTGGTTGCCAGAAGAAGCTCGAGAT
EX755342       --> AAGTTCAACGTCGCGAATCCTACCACTGGTTGCCAAAAGAAGCTCGAGAT
EX758029       --> ..................................gGAAGAAGCTCGAGAT
EY907609       --> ..................................................
FD970459       --> ..................................................

               146    -    196
UN20635        --> CGACGATGACCAAAAGCTGCGTGCTTTTTACGACAAGAGGCTCTCTCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530671       <-- ..................................................
FD531471       <-- ..................................................
EX761472       <-- ..................................................
FD966817       <-- ..................................................
FD538322       <-- ..................................................
EY903503       <-- ..................................................
FD535914       --> CGACGATGACCAAAAGCTGCGTGCTTTTTACGACAAGAGGCTCTCTCAGG
FD542191       --> CGACGATGACCAAAAGCTGCGTGCTTTTTACGACAAGAGGCTCTCTCAGG
EV526105       --> CGACGATGACCAAAAGCTGCGTGCTTTTTACGACAAGAGGCTCTCTCAGG
EX755342       --> CGACGATGACCAAAAGCTGCGTGCTTTTTACGACAAGAGGCTCTCTCAGG
EX758029       --> CGACGATGACCAAAAGCTGCGTGCTTTTTACGACAAGGGGCTCTCTCAGG
EY907609       --> ..................................................
FD970459       --> ..................................................

               196    -    246
UN20635        --> AAGTTAGCGGAGATGCTTTGGGCGAGGAATTCAAGGGGTACGTCTTCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530671       <-- .......................GAGGAATTCAAGGGGTACGTCTTCAAG
FD531471       <-- ................................AAGGGGTACGTCTTCAAG
EX761472       <-- ..................................................
FD966817       <-- ..................................................
FD538322       <-- ..................................................
EY903503       <-- ..................................................
FD535914       --> AAGTTAGCGGAGATGCTTTGGGCGAGGAATTCAAGGGGTACGTCTTCAAG
FD542191       --> AAGTTAGCGGAGATGCTTTGGGCGAGGAATTCAAGGGGTACGTCTTCAAG
EV526105       --> AAGTTAGCGGAGATGCTTTGGGCGAGGAATTCAAGGGGTACGTCTTCAAG
EX755342       --> AAGTTAGTGGAGATGCTTTGGGCGAGGAATTCAAGGGGTACGTCTTCAAG
EX758029       --> AAGTTAGCGGAGATGCTTTGGGCGAGGAATTCAAGGGGTACGTCTCCAAG
EY907609       --> ..................................................
FD970459       --> ..................................................

               246    -    296
UN20635        --> ATCATGGGAGGTTGCGACAAGCAAGGTTTCCCAATGAAACAGGGAGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530671       <-- ATCATGGGAGGTTGCGACAAGCAAGGTTTCCCAATGAAACAGGGAGTTCT
FD531471       <-- ATCATGGGAGGTTGCGACAAGCAAGGTTTCCCAATGAAACAGGGAGTTCT
EX761472       <-- .........................GTTTCCCAATGAAACAGGGAGTTCT
FD966817       <-- ..................................................
FD538322       <-- ..................................................
EY903503       <-- ..................................................
FD535914       --> ATCATGGGAGGTTGCGACAAGCAAGGTTTCCCAATGAAACAGGGAGTTCT
FD542191       --> ATCATGGGAGGTTGCGACAAGCAAGGTTTCCCAATGAAACAGGGAGTTCT
EV526105       --> ATCATGGGAGGTTGCGACAAGCAAGGTTTCCCAATGAAACAGGGAGTTCT
EX755342       --> ATCATGGGAGGTTGCGACAAGCAAGGTTTCCCAATGAAACAGGGAGTTCT
EX758029       --> ATCATGGGAGGTTGCGACAAGCAAGGTTTCCCAATGAAACAGGGAGTTCT
EY907609       --> ..............................................gTCT
FD970459       --> ..................................................

               296    -    346
UN20635        --> CACCCCTGGTCGTGTCCGCCTTTTACTTCACCGAGGTACTCCTTGCTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530671       <-- CACCCCTGGTCGTGTCCGCCTTTTACTTCACCGAGGTACTCCTTGCTTCA
FD531471       <-- CACCCCTGGTCGTGTCCGCCTTTTACTTCACCGAGGTACTCCTTGCTTCA
EX761472       <-- CACCCCTGGTCGTGTCCGCCTTTTACTTCACCGAGGTACTCCTTGCTTCA
FD966817       <-- ............TGTCCGCCTTTTACTTCACCGAGGTACTCCTTGCTTCA
FD538322       <-- ..................................................
EY903503       <-- ..................................................
FD535914       --> CACCCCTGGTCGTGTCCGCCTTTTACTTCACCGAGGTACTCCTTGCTTCA
FD542191       --> CACCCCTGGTCGTGTCCGCCTTTTACTTCACCGAGGTACTCCTTGCTTCA
EV526105       --> CACCCCTGGTCGTGTCCGCCTTTTACTTCACCGAGGTACTCCTTGCTTCA
EX755342       --> CACCCCTGGTCGTGTCCGCCTTTTACTTCACCGAGGTACTCCTCGCTTCA
EX758029       --> CACCCCTGGTCGTGTCCGCCTTTTACTTCACCGAGGTACTCCTTGCTTCA
EY907609       --> CACCCCTGGTCGTGTCCGCCTTTTACTTCACCGAGGTACTCCTTGCTTCA
FD970459       --> ..................................................

               346    -    396
UN20635        --> GAGGACACGGAAGAAGGACTGGAGAGAGGAGAAGAAAGTCTGTCCGTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530671       <-- GAGGACACGGAAGAAGGACTGGAGAGAGGAGAAGAAAGTCTGTCCGTGGT
FD531471       <-- GAGGACACGGAAGAAGGACTGGAGAGAGGAGAAGAAAGTCTGTCCGTGGT
EX761472       <-- GAGGACACGGAAGAAGGACTGGAGAGAGGAGAAGAAAGTCTGTCCGTGGT
FD966817       <-- GAGGACACGGAAGAAGGACTGGAGAGAGGAGAAGAAAGTCTGTCCGTGGT
FD538322       <-- ..............................GAAGAAAGTCTGTCCGTGGT
EY903503       <-- ..................................................
FD535914       --> GAGGACACGGAAGAAGGACTGGAGAGAGGAGAAGAAAGTCTGTCCGTGGT
FD542191       --> GAGGACGCGGAAGAAGGACTGGAGAGAGGAGAAGAAAGTCTGTCCGTGGT
EV526105       --> GAGGACACGGAAGAAGGACTGGAGAGAGGAGAAGAAAGTCTGTCCGTGGT
EX755342       --> GAGGACACGGAAGAAGGACTGGAGAGAGGAGAAGAAAGTCTGTCCGTGGT
EX758029       --> GAGGACACGGAAGAAGGACTGGAGAGAGGAGAAGAAAGTCTGTCCGTGGT
EY907609       --> GAGGACACGGAAGAAGGACTGGAGAGAGGAGAAGAAAGTCTGTCCGTGGT
FD970459       --> ..................................................

               396    -    446
UN20635        --> TGCATTGTCAGCCAAGACCTTTCTGTTCTTAACTTGGTCATTGTCAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530671       <-- TGCATTGTCAGCCAAGACCTTTCTGTTCTTAACTTGGTCATTGTCAAGAA
FD531471       <-- TGCATTGTCAGCCAAGACCTTTCTGTTCTTAACTTGGTCATTGTCAAGAA
EX761472       <-- TGCATTGTCAGCCAAGACCTTTCTGTTCTTAACTTGGTCATTGTCAAGAA
FD966817       <-- TGCATTGTCAGCCAAGACCTTTCTGTTCTTAACTTGGTCATTGTCAAGAA
FD538322       <-- TGCATTGTCAGCCAAGACCTTTCTGTTCTTAACTTGGTCATTGTCAAGAA
EY903503       <-- ..................................................
FD535914       --> TGCATTGTCAGCCAAGACCTTTCTGTTCTTAACTTGGTCATTGTCAAGAA
FD542191       --> TGCATTGTCAGCCAAGACCTTTCTGTTCTTAACTTGGTCATTGTCAAGAA
EV526105       --> TGCATTGTCAGCCAAGACCTTTCTGTTCTTAACTTGGTCATTGTCAAGAA
EX755342       --> TGCATTGTCAGCCAAGACCTTTCTGTTCTTAACTTGGTCATTGTCAAGAA
EX758029       --> TGCATTGTCAGCCAAGACCTTTCTGTTCTTAACTTGGTCATTGTCAAGAA
EY907609       --> TGCATTGTCAGCCAAGACCTTTCTGTTCTTAACTTGGTCATTGTCAAGAA
FD970459       --> ..................................................

               446    -    496
UN20635        --> GGGTGAGAAGGATCTCCCCGGGCTTACCGACACCGAGAAGCCAAGGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530671       <-- GGGTGAGAAGGATCTCCCCGGGCTTACCGACACCGAGAAGCCAAGGATGA
FD531471       <-- GGGTGAGAAGGATCTCCCCGGGCTTACCGACACCGAGAAGCCAAGGATGA
EX761472       <-- GGGTGAGAAGGATCTCCCCGGGCTTACCGACACCGAGAAGCCAAGGATGA
FD966817       <-- GGGTGAGAAGGATCTCCCCGGGCTTACCGACACCGAGAAGCCAAGGATGA
FD538322       <-- GGGTGAGAAGGATCTCCCCGGGCTTACCGACACCGAGAAGCCAAGGATGA
EY903503       <-- ...................................AGAAGCCAAGGATGA
FD535914       --> GGGTGAGAAGGATCTCCCCGGGCTTACCGACACCGAGAAGCCAAGGATGA
FD542191       --> GGGTGAGAAGGATCTCCCCGGGCTTACCGACACCGAGAAGCCAAGGATGA
EV526105       --> GGGTGAGAAGGATCTCCCCGGGCTTACCGACACCGAGAAGCCAAGGATGA
EX755342       --> GGGTGAGAAGGATCTCCCCGGGCTTACCGACACCGAGAAGCCAAGGATGA
EX758029       --> GGGTGAGAAGGATCTCCCCGGGCTTACCGACACCGAGAAGCCAAGGATGA
EY907609       --> GGGTGAGAAGGATCTCCCCGGGCTTACCGACACCGAGAAGCCAAGGATGA
FD970459       --> ..................................................

               496    -    546
UN20635        --> GAGGTCCCAAGAGGGCATCCAAGATCCGCAAGTTGTTCAACCTCACTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530671       <-- GAGGTCCCAAGAGGGCATCCAAGATCCGCAAGTTGTTCAACCTCACTAAG
FD531471       <-- GAGGTCCCAAGAGGGCATCCAAGATCCGCAAGTTGTTCAACCTCACTAAG
EX761472       <-- GAGGTCCCAAGAGGGCATCCAAGATCCGCAAGTTGTTCAACCTCACTAAG
FD966817       <-- TAGGTCCCAAGAGGGCATCCAAGATCCGCAAGTTGTTCAACCTCACTAAG
FD538322       <-- GAGGTCCCAAGAGGGCATCCAAGATCCGCAAGTTGTTCAACCTCACTAAG
EY903503       <-- GAGGTCCCAAGAGGGCATCCAAGATCCGCAAGTTGTTCAACCTCACTAAG
FD535914       --> GAGGTCCCAAGAGGGCATCCAAGATCCGCAAGTTGTTCAACCTCACTAAG
FD542191       --> GAGGTCCCAAGAGGGCATCCAAGATCCGCAAGTTGTTCAACCTCACTAAG
EV526105       --> GAGGTCCCAAGAGGGCATCCAAGATCCGCAAGTTGTTCAACCTCACTAAG
EX755342       --> GAGGTCCCAAGAGGGCATCCAAGATCCGCAAGTTGTTCAACCTCACTAAG
EX758029       --> GAGGTCCCAAGAGGGCATCCAAGATCCGCAAGTTGTTCAACCTCACTAAG
EY907609       --> GAGG-CCCAAGAGGGCATCCAAGATCCGCAAGTTGT-CAACCTCACTAAG
FD970459       --> ..................................................

               546    -    596
UN20635        --> GATGATGATGTTAGGAAGTATGTCAACACTTACCGCCGCAAATTCACTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530671       <-- GATGATGATGTTAGGAAGTATGTCAACACTTACCGCCGCAAATTCACTAA
FD531471       <-- GATGATGATGTTAGGAAGTATGTCAACACTTACCGCCGCAAATTCACTAA
EX761472       <-- GATGATGATGTTAGGAAGTATGTCAACACTTACCGCCGCAAATTCACTAA
FD966817       <-- AATGATGATGTTAGGAAGTATGTCAACACTTACCGCCGCAAATTCACTAA
FD538322       <-- GATGATGATGTTAGGAAGTATGTCAACACTTACCGCCGCAAATTCACTAA
EY903503       <-- GATGATGATGTTAGGAAGTATGTCAACACTTACCGCCGCAAATTCACTAA
FD535914       --> GATGATGATGTTAGGAAGTATGTCAACACTTACCGCCGCAAATTCACTAA
FD542191       --> GATGATGATGTTAGGAAGTATGTCAACACTTACCGCCGCAAATTCACTAA
EV526105       --> GATGATGATGTTAGGAAGTATGTCAACACTTACCGCCGCAAATTCACTAA
EX755342       --> GATGATGATGTTAGGAAGTATGTCAACACTTACCGCCGCAAATTCACTAA
EX758029       --> GATGATGATGTTAGGAAGTATGTCAACACTTACCGCCGCAAATTCACTAA
EY907609       --> GATGATGATGTTAGGAAGTATGTCAACACTT...................
FD970459       --> ..................................................

               596    -    646
UN20635        --> CAAGAAAGGTAAGGAAGTGAGCAAAGCCCCCAAGATCCAGAGGCTTGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530671       <-- CAAGAAAGGTAAGGAAGTGAGCAAAGCCCCCAAGATCCAGAGGCTTGTGA
FD531471       <-- CAAGAAAGGTAAGGAAGTGAGCAAAGCCCCCAAGATCCAGAGGCTTGTGA
EX761472       <-- CAAGAAAGGTAAGGAAGTGAGCAAAGCCCCCAAGATCCAGAGGCTTGTGA
FD966817       <-- CAAGAAAGGTAAGGAAGTGAGCAAAGCCCCCAAGATCCAGAGGCTTGTGA
FD538322       <-- CAAGAAAGGTAAGGAAGTGAGCAAAGCCCCCAAGATCCAGAGGCTTGTGA
EY903503       <-- CAAGAAAGGTAAGGAAGTGAGCAAAGCCCCCAAGATCCAGAGGCTTGTGA
FD535914       --> CAAGAAAGGTAAGGAAGTGAGCAAAGCCCCCAAGATCCAGAGGCTTGTGA
FD542191       --> CAAGAAAGGTAAAGAAGTGAGCAAAGCCCCCAAGATCCAGAGGCTTGTGA
EV526105       --> CAAGAAAGGTAAGGAAGTGAGCAAAGCCCCCAAGATCCAGAGGCTTGTGA
EX755342       --> CAAGAAAGGTAAGGAAGTGAGCAAAGCCCCCAAGATCCAGAGGCTTGTGA
EX758029       --> CAAGAAAGGTAAGGAAGTGAGCAAAGCCCCCAAGATCCAGAGGCTTGTGA
EY907609       --> ..................................................
FD970459       --> ..................................................

               646    -    696
UN20635        --> CTCCTTTGACACTTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530671       <-- CTCCTTTGACACTTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGAAG
FD531471       <-- CTCCTTTGACACTTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGAAG
EX761472       <-- CTCCTTTGACACTTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGAAG
FD966817       <-- CTCCTTTGACACTTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGAAG
FD538322       <-- CTCCTTTGACACTTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGAAG
EY903503       <-- CTCCTTTGACACTTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGAAG
FD535914       --> CTCCTTTGACACTTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGAAG
FD542191       --> CTCCTTTGACACTTCAGAGGAAGAGAGCTAGAATTGCCG...........
EV526105       --> CTCCTTTGACACTTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGAAG
EX755342       --> CTCCTTTGACACTTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGA-G
EX758029       --> CTCCTTTGACACTTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGAAG
EY907609       --> ..................................................
FD970459       --> ..................................................

               696    -    746
UN20635        --> AGAATCGCCAAGGCTAACTCTGATGCTGCTGAGTACCAGAAGCTTCTCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530671       <-- AGAATCGCCAAGGCTAACTCTGATGCCGCTGAGTACCAGAAGCTTCTCGC  Raphanus raphanistrum subsp. maritimus
FD531471       <-- AGAATCGCCAAGGCTAACTCTGATGCCGCTGAGTACCAGAAGCTTCTCGC  Raphanus raphanistrum subsp. maritimus
EX761472       <-- AGAATCGCCAAGGCTAACTCTGATGCTGCTGAGTACCAGAAGCTTCTCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966817       <-- AGAATCGCCAAGGCTAACTCTGATGCTGCTGAGTACCAGAAGCTTCTCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538322       <-- AGAATCGCCAAGGCTAACTCTGATGCTGCTGAGTACCAGAAGCTTCTCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903503       <-- AGAATCGCCAAGGCTAACTCTGATGCTGCTGAGTACCAGAAGCTTCTCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535914       --> AGAATCGCCAAGGCTAACTCTGATGCCGCTGAGTACCAGAAGCTTCTCGC  Raphanus raphanistrum subsp. maritimus
FD542191       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV526105       --> AGAATCGCCAAGGCTAACTCTGATGCCGCTGAGTACCAGAAGCTTCTCGC  Raphanus raphanistrum subsp. maritimus
EX755342       --> AG-ATCGCCAAG-CT-ACTCTGATGCTGCTGAGTAC-AGAAGCTTCTCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758029       --> AGAATCGCCAAGGCTAACTCTGATGCTGCTGAGTACCAGAAGCTTCTCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907609       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD970459       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               746    -    796
UN20635        --> CTCCAGGCTTAAGGAGCAGCGTGATCGCCGTAGTGAAAGTTTGGCCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530671       <-- CTCCAGGCTTAAGGAGCAGCGTGATCGCCGTAGTGAAAGTTTGGCCAAGA
FD531471       <-- CTCCAGGCTTAAGGAGCAGCGTGATCGCCGTAGTGAAAGTTTGGCCAAGA
EX761472       <-- CTCCAGGCTTAAGGAGCAGCGTGATCGCCGTAGTGAAAGTTTGGCCAAGA
FD966817       <-- CTCCAGGCTTAAGGAGCAGCGTGATCGCCGTAGTGAAAGTTTGGCCAAGA
FD538322       <-- CTCCAGGCTTAAGGAGCAGCGTGATCGCCGTAGTGAAAGTTTGGCCAAGA
EY903503       <-- CTCCAGGCTTAAGGAGCAGCGTGATCGCCGTAGTGAAAGTTTGGCCAAGA
FD535914       --> t.................................................
FD542191       --> ..................................................
EV526105       --> CTCCAGGCTTAAGGAGCAGCGTGATCGCCGTAGTGAAAGTTTGGCCAAGA
EX755342       --> -T-CAGGC-TAA-GAGCAGCGTGATCGCCGTAGTGAAgt...........
EX758029       --> CTCCAGGCTTAAGGAGCAGCGTGATCGCCGTAGTGAAAGTTTGGCCAAGA
EY907609       --> ..................................................
FD970459       --> ................CAGCGTGATCGCCGTAGTGAAAGTTTGGCCAAGA

               796    -    846
UN20635        --> AGAGGTCTAGGCTCTCTTCCGCTGCCGCTAA----GCCCGTTGCTGCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530671       <-- AGAGGTCTAGGCTCTCTTCCGCTGCCGCTAACTAAGCCCGTTGCTGCGTA
FD531471       <-- AGAGGTCTAGGCTCTCTTCCGCTGCCGCTAACTAAGCCCGTTGCTGTGTA
EX761472       <-- AGAGGTCTAGGCTCTCTTCCGCTGCCGCTAA----GCCCGTTGCTGCGTA
FD966817       <-- AGAGGTCTAGGCTTTCTTCCGCTGCCGCTAA----GCCCGTTGCTGCGTA
FD538322       <-- AGAGGTCTAGGCTCTCTTCCGCTGCCGCTAA----GCCCGTTGCTGCGTA
EY903503       <-- AGAGGTCTAGGCTCTCTTCCGCTGCCGCTAA----GCCCGTTGCTGCGTA
FD535914       --> ..................................................
FD542191       --> ..................................................
EV526105       --> ..................................................
EX755342       --> ..................................................
EX758029       --> AGAGGTCTAGGCTCTCTTCCGCTGCCGCTAA----GCCCGTTGCTGCGTA
EY907609       --> ..................................................
FD970459       --> AGAGGTCTAGGCTCTCTTCCGCTGCCGCTAA----GCCCGTTGCTGCGTA

               846    -    896
UN20635        --> AAACCTATTCCATCATCAAGACACTTCGTTCTCTCTCTTAGTCTGTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530671       <-- AAACCTATTCCATCATCAAGACACTTCGTTCTCTCTCTTAGTCTGTTTCT
FD531471       <-- AAACCTATTCCATCATCAAGACACTTCGTTCTCTCTCTTAGTCTGTTTCT
EX761472       <-- AAACCTATTCCATCATCAAGACACTTCGTTCTCTCTCTTAGTCTGTTTCT
FD966817       <-- AAACCTATTCCATCATCAAGACACTTCGTTCTCTCTCTTAGTCTGTTTCT
FD538322       <-- AAACCTATTCCATCATCAAGACACTTCGTTCTCTCTCTTAGTCTGTTTCT
EY903503       <-- AAACCTATTCCATCATCAAGACACTTCGTTCTCTCTCTTAGTCTGTTTCT
FD535914       --> ..................................................
FD542191       --> ..................................................
EV526105       --> ..................................................
EX755342       --> ..................................................
EX758029       --> AAACCTATTCCATCATCAAGACACTTCGTTCTCTCTCTTAGTCTGTTTCT
EY907609       --> ..................................................
FD970459       --> AAACCTATTCCATCATCAAGACACTTCGTTCTCTCTCTTAGTCTGTTTCT

               896    -    946
UN20635        --> GCGTTTTATTGGGACATGTAAACGCCGTTTTGAACGTCTCTCTTTTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530671       <-- GCCTTTTATTGGGACATGTAAACGCCGTTTTGAACGTCTCTCTTTTTTTT
FD531471       <-- GCGTTTTATTGGGACATGTAAACGCCGTTTTGAACGTCTCTCTTTTTTTT
EX761472       <-- GCGTTTTATTGGGACATGTAAACGCCGTTTTGAACGTCTCTCTTTTTTTT
FD966817       <-- GCGTTTTATTGGGACATGTAAACGCCGTTTTGAACGTCTCTCTTTTTTTT
FD538322       <-- GCGTTTTATTGGGACATGTAAACGCCGTTTTGAACGTCTCTCTTTTTTTT
EY903503       <-- GCGTTTTATTGGGACATGTAAACGCCGTTTTGAACGTCTCTCTTTTTTTT
FD535914       --> ..................................................
FD542191       --> ..................................................
EV526105       --> ..................................................
EX755342       --> ..................................................
EX758029       --> GCGTTTTATTGGGACATGTAAACGCC........................
EY907609       --> ..................................................
FD970459       --> GCGTTTTATTGGGACATGTAAACGCCGTTTTGA-CGTCTCTCTT......

               946    -    996
UN20635        --> GGTTTCTGCTTTGTCTTAGCTCTTAAACCTTTCTATTATATCAAAGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530671       <-- GGTTTCTGCTTTGTCTTAGCTCTTAAACCTTTCTATTATATCAAAGTTTT
FD531471       <-- GGTTTCTGCTTTGTCTTAGCTCTTAAACCTTTCTATTATATCAAAGTTTT
EX761472       <-- GGTTTCTGCTTTGTCTTAGCTCTTAAACCTTTCTATTATATCAAAGTTTT
FD966817       <-- GGTTTCTGCTTTGTCTTAGCTCTTAAACCTTTCTATTATATCAAAGTTTT
FD538322       <-- GGTTTCTGCTTTGTCTTAGCTCTTAAACCTTTCTATTATATCAAAGTTTT
EY903503       <-- GGTTTCTGCTTTGTCTTAGCTCTTAAACCTTTCTATTATATCAAAGTTTT
FD535914       --> ..................................................
FD542191       --> ..................................................
EV526105       --> ..................................................
EX755342       --> ..................................................
EX758029       --> ..................................................
EY907609       --> ..................................................
FD970459       --> ..................................................

               996    -   1046
UN20635        --> TGAACTTGTTTGCTCC
                   ~~~~~~~~~~~~~~~~
EV530671       <-- TGAACTTaaaag....
FD531471       <-- TGAACTTGTTTGCTC.
EX761472       <-- TGAACTTGTTTGC...
FD966817       <-- TGAACTTGTTTGCcc.
FD538322       <-- TGAACTTGTTTGCTCC
EY903503       <-- TGAACTTGTTTGCTCC
FD535914       --> ................
FD542191       --> ................
EV526105       --> ................
EX755342       --> ................
EX758029       --> ................
EY907609       --> ................
FD970459       --> ................