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Alignment for radish unigene UN20642

               1      -     51
UN20642        --> CTGTAACACAAGAAATTAGCTTATAGCAAAATCATAAATTCAACTCGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- ..................................................
EX905632       <-- ..................................................
EV566311       <-- ..................................................
FY441673       <-- ..................................................
EX772592       <-- ..................................................
EV571472       --> CTGTAACACAAGAAATTAGCTTATAGCAAAATCATAAATTCAACTCGGAA
FD574206       --> ......................ATAGCAAAATCATAAATTCAACTCGGAA
FD944951       --> ......................ATAGCAAAATCATAAATTCAACTCGGAA
EX752651       --> ..................................TAAATTCAACTCGGAA

               51     -    101
UN20642        --> AAAAAGTGTGGCAGTGTGAAGCAAAGGCAATGTTGCAAAACTGGAAAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- ..................................................
EX905632       <-- ..................................................
EV566311       <-- ..................................................
FY441673       <-- ..................................................
EX772592       <-- ..................................................
EV571472       --> AAAAAGTGTTGCAGTGTGAAGCAAAGGCAATGTTGCAAAACTGGAAAAGG
FD574206       --> AAAAAGTGTGGCAGTGTGAAGCAAAGGCAATGTTGCAAAACTGGAAAAGG
FD944951       --> AAAAAGTGTGGCAGTGTGAAGCAAAGGCAATGTTGCAAAACTGGAAAAGG
EX752651       --> AAAAAGTGTGGCAGTGTGAAGCAAAGGCAATGTTGCAAAACTGGAAAAGG

               101    -    151
UN20642        --> AAAAAAATACAAAAACTAATATCACATCACAATTTGAGAATGGCATCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- ..................................................
EX905632       <-- ..................................................
EV566311       <-- ..................................................
FY441673       <-- ..................................................
EX772592       <-- ..................................................
EV571472       --> AAAAA--TACAAAAACTAATATCACATCACAATTTGAGAATGGCATCTTC
FD574206       --> AAAAAAATACAAAAACTAATATCACATCACAATTTGAGAATGGCATCTTC
FD944951       --> AAAAAAATACAAAAACTAATATCACATCACAATTTGAGAATGGCATCTTC
EX752651       --> AAAAAAATACAAAAACTAATATCACATCACAATTTGAGAATGGCATCTTC

               151    -    201
UN20642        --> TCAGTTTCAGATGCAAATTTAAAGTTTTGCTCCTTCAAGAGAGAACTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- ..................................................
EX905632       <-- ..................................................
EV566311       <-- ..................................................
FY441673       <-- ..................................................
EX772592       <-- ..................................................
EV571472       --> TCAGTTTCAGCTGCAAATTTAAAGTT------CTTC-TGAAAGAACTTCA
FD574206       --> TCAGTTTCAGATGCAAATTTAAAGTTTTGCTCCTTCAAGAGAGAACTTCA
FD944951       --> TCAGTTTCAGATGCAAATTTAAAGTTTTGCTCCTTCAAGAGAGAACTTCA
EX752651       --> TCAGTTTCAGATGCAAATTTAAAGTTTTGCTCCTTCAAGAGAGAACTTCA

               201    -    251
UN20642        --> ACGCATTTTGTAGTGTTGGGTCCTTGAGACCTTGGAGTGCTGGCCATTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- ........................TGAGACCTTGGAGTGCTGGCCATTCA
EX905632       <-- .........................GAGACCTTGGAGTGCTGGCCATTCA
EV566311       <-- ............................................CATTCA
FY441673       <-- ..................................................
EX772592       <-- ..................................................
EV571472       --> ACGCATTTTGTAGTGTTGGGTCCTTGAGACTTTGGAGTGCTGGCCATTCA
FD574206       --> ACGCATTTTGTAGTGTTGGGTCCTTGAGACCTTGGAGTGCTGGCCATTCA
FD944951       --> ACGCATTTTGTAGTGTTGGGTCCTTGAGACCTTGGAGTGCTGGCCATTCA
EX752651       --> ACGCATTTTGTAGTGTTGGGTCCTTGAGACCTTGGAGTGCTGGCCATTCA

               251    -    301
UN20642        --> AAGAATAGCTTAGCTTTATGTCAACGTCTCTAGGATTCTTCTTGTTATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- AAGAATAGCTTAGCTTTATGTCAACGTCTCTAGGATTCTTCTTGTTATAC
EX905632       <-- AAGAATAGCTTAGCTTTATGTCAACGTCTCTAGGATTCTTCTTGTTATAC
EV566311       <-- AAGAATAGCTTAGCTTTATGTCAACGTCTCTAGGATTCTTCTTGTTATAC
FY441673       <-- ..................................................
EX772592       <-- ..................................................
EV571472       --> AAGAATAGCTTAACTTTATGTCAACGTCTCTAGGATTCTTCTTGTTATAC
FD574206       --> AAGAATAGCTTAGCTTTATGTCAACGTCTCTAGGATTCTTCTTGTTATAC
FD944951       --> AAGAATAGCTTAGCTTTATGTCAACGTCTCTAGGATTCTTCTTGTTATAC
EX752651       --> AAGAATAGCTTAGCTTTATGTCAACGTCTCTAGGATTCTTCTTGTTATAC

               301    -    351
UN20642        --> GAAACAGACATGCTTCCAGTGATCGTCTCACCCTCACATATTGTTAACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- GACACAGACATGCTTCCAGTGATCGTCTCACCCTCACATATTGTTAACAC  Raphanus sativus cv Early Scarlet Globe
EX905632       <-- GAAACAGACATGCTTCCAGTGATCGTCTCACCCTCACATATGGTTAACAC  Raphanus sativus cv Rat-Tail Radish #3870
EV566311       <-- GAAACAGACATGCTTCCAGTGATCGTCTCACCCTCACATATAGTTAACAC  Raphanus raphanistrum subsp. landra
FY441673       <-- ..................................................  Raphanus sativus cv GSK3-1
EX772592       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV571472       --> GAAACAGACATGCTTCCAGTGATCGTCTCACCCTCACATATAGTTAACAC  Raphanus raphanistrum subsp. landra
FD574206       --> GACACAAACATGCTTCCAGTGATCGTCTCACCCTCACATATTGTTAACAC  Raphanus sativus cv Early Scarlet Globe
FD944951       --> GACACAGACATGCTTCCAGTGATCGTCTCACCCTCACATATTGTTAACAC  Raphanus sativus cv Early Scarlet Globe
EX752651       --> GAAACAGACATGCTTCCAGTGATCGTCTCACCCTCGCATATGGTTAACAC  Raphanus raphanistrum subsp. maritimus

               351    -    401
UN20642        --> ATCTTCAAGGTACATGACTGTTTGTTTCCAGTGCGTAGCCCGGGATCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- ATCTTCAAGGTACATGACTGTTTGTTTCCAGTGCGTAGCCCGGGATCTCG
EX905632       <-- ATCTTCAAGGTACATGACTGTTTGTTTCCAGTGCGTAGCCCGGGATCTCG
EV566311       <-- ATCTTCAAGGTACATGACTGTTTGTTTCCAGTGCGTAGCCCGGGATCTCG
FY441673       <-- ..................................................
EX772592       <-- ..................................................
EV571472       --> ATCTTCAAGGTACATGACTGTTTGTTTCCAGTGCGTAGCCCGGGATCTCG
FD574206       --> ATCTTCAAGGTACATGACTGTTTGTTTCCAGTGCGTAGCCCGGGATCTCG
FD944951       --> ATCTTCAAGGTACATGACTGTTTGTTTCCAGTGCGTAGCCCGGGATCTCG
EX752651       --> ATCTTCAAGGTACATGACTGTTTGTTTCCAGTGTGTAGCCCGGGATCTCG

               401    -    451
UN20642        --> GTCCTGTTGAGAAACCAAGGAGCTTGTGGCACATGGTGAATGATACATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- GTCCTGTTGAGAAACCAAGGAGCTTGTGGCACATGGTGAATGATACATCA
EX905632       <-- GTCCTGTTGAGAAACCAAGGAGCTTGTGGCACATGGTGAATGATACATCA
EV566311       <-- GTCCTGTTGAGAAACCAAGGAGCTTGTGGCACATGGTGAATGATACATCA
FY441673       <-- ..................................................
EX772592       <-- ..................................................
EV571472       --> GTCCTGTTGAGAAACCAAGGAGCTTGTGGCACATGGTGAATGATACATCA
FD574206       --> GTCCTGTTGAGAAACCAAGGAGCTTGTGGCACATGGTGAATGATACATCA
FD944951       --> GTCCTGTTGAGAAACCAAGGAGCTTGTGGCACATGGTGAATGATACATCA
EX752651       --> GTCCTATTGAGAAACCAAGGAGCTTGTGGCACATGGTGAATGATACATCA

               451    -    501
UN20642        --> AAGTAGGCTACAAGGGCGTGTATGTAGTCATTGCGTTGTGCAACAAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- AAGTAGGCTACAAGGGCGTGTATGTAGTCATTGCGTTGTGCAACAAGTTT  Raphanus sativus cv Early Scarlet Globe
EX905632       <-- AAGTAGGCTACAAGGGCGTGTATGTAGTCATTGCGTTGTGCAACAAGTTT  Raphanus sativus cv Rat-Tail Radish #3870
EV566311       <-- AAGTAGGCTACAAGGGCGTGGATGTAGTCATTGCGTTGTGCAACGAGTTT  Raphanus raphanistrum subsp. landra
FY441673       <-- ..................................................  Raphanus sativus cv GSK3-1
EX772592       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV571472       --> AAGTAGGCTACAAGGGCGTGGATGTAGTCATTGCGTTGTGCAACGAGTTT  Raphanus raphanistrum subsp. landra
FD574206       --> AAGTAGGCTACAAGGGCGTGTATGTAGTCATTGCGTTGTGCAACAAGTTT  Raphanus sativus cv Early Scarlet Globe
FD944951       --> AAGTAGGCTACAAGGGCGTGTATGTAGTCATTGCGTTGTGCAACAAGTTT  Raphanus sativus cv Early Scarlet Globe
EX752651       --> AAGTAGGCTACAAGGGCGTGGATGTAGTCATTGCGTTGTGCAACAAGTTT  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN20642        --> AAAAGGAGCTGTGAAGGAAGCATCACCAGAAGACATCTTCGAGATATCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- AAAAGGAGCTGTGAAGGAAGCATCACCAGAAGACATCTTCGAGATATCCA  Raphanus sativus cv Early Scarlet Globe
EX905632       <-- AAAAGGAGCTGTGAAGGAAGCATCACCAGAAGACATCTTCGAGATATCCA  Raphanus sativus cv Rat-Tail Radish #3870
EV566311       <-- AAAGGGAGCTGTGAAGGAAGCATCACCAGAAGACATCTTCGAGATATCCA  Raphanus raphanistrum subsp. landra
FY441673       <-- ..................................................  Raphanus sativus cv GSK3-1
EX772592       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV571472       --> AAAGGGAGCTGTGAAGGAAGCATCACCAGAAGACATCTTCGAGATATCCA  Raphanus raphanistrum subsp. landra
FD574206       --> AAAAGGAGCTGTGAAGGAAGCATCACCAGAAGACATCTT...........  Raphanus sativus cv Early Scarlet Globe
FD944951       --> AAAAGGAGCTGTGAAGGAAGCATCACCAGAAGACATCTTCGAGATATCCA  Raphanus sativus cv Early Scarlet Globe
EX752651       --> AAAGGGAGCTGTGAAGGAAGCATCACCAGAAGACATCTTCGAGATATCCA  Raphanus raphanistrum subsp. maritimus

               551    -    601
UN20642        --> TTGTCTTAAGTAGCTTACTATCGGTCACAATCTGGTTTTGGTCGACTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- TTGTCTTAAGTAGCTTACTATCGGTCACAATCTGGTTTTGGTCGACTGTG
EX905632       <-- TTGTCTTAAGTAGCTTACTATCGGTCACAATCTGGTTTTGGTCGACTGTG
EV566311       <-- TTGTCTTAAGTAGCTTACTATCGGTGACAATCTGGTTTTGGTCGACTGTG
FY441673       <-- .......................................GGTCGACTATG
EX772592       <-- ..................................................
EV571472       --> TTGTCTTAAGTAGCTTACTATCGGTGACAATCTGGTTTTGGTCGACTGTG
FD574206       --> ..................................................
FD944951       --> TTGTCTTAAGTAGCTTACTATCGGTCACAATCTGGTTTTGGTCGACTGTG
EX752651       --> TTGTCTTAAGTAGCTTACTATCGGTCACAATCTGGTTTTGGTCGACTGTG

               601    -    651
UN20642        --> TCAACAAGTGGTTCCATCATAGCTTTTTTCTTGATGCATGACATGTCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- TCAACAAGTGGTTCCATCATAGCTTTTTTCTTGATGCATGACATGTCAAA
EX905632       <-- TCAACAAGTGGTTCCATCATAGCTTTTTTCTTGATGCATGACATGTCAAA
EV566311       <-- TCAACAAGTGGTTCCATCATAGCTTTTTTCTTGATGCATGACATGTCAAA
FY441673       <-- TCAACAAGTGGTTCCATCATAGCTTTTTTCTTGATGCATGACATGTCAAA
EX772592       <-- ..................................................
EV571472       --> TCAACAAGTGGTTCCATCATAGCTTTTTTCTTGATGCATGACATGTCAAA
FD574206       --> ..................................................
FD944951       --> TCAACAAGTGGTTCCATCATAGCTTTTTTCTTGATGCATGACATGTCAAA
EX752651       --> TCAACAAGTGGTTCCATCATAGCTTTTTTCTTGATGCATGACATGTCAAA

               651    -    701
UN20642        --> ACCATACACACTGTTCCAAAATTCGATTTTGTCTTCTTTATACTCTGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- ACCATACACACTGTTCCAAAATTCGATTTTGTCTTCTTTATACTCTGAAT
EX905632       <-- ACCATACACACTGTTCCAAAATTCGATTTTGTCTTCTTTATACTCTGAAT
EV566311       <-- ACCATACACACTGTTCCAAAATTCAATTTTGTCTTCTTTATACTCTGAAT
FY441673       <-- ACCATACACACTGTTCCAAAATTCAATTTTGTCTTCTTTATACTCTGAAT
EX772592       <-- ..................................................
EV571472       --> ACCATACACACTGTTCCAAAATTCAATTTTGTCTTCTTTATACTCTGAAT
FD574206       --> ..................................................
FD944951       --> ACCATACACACTGTTCCAAA..............................
EX752651       --> ACCATACACACTGTTCCAAAATTCGATTTTGTCTTCTTTATACTCTGAAT

               701    -    751
UN20642        --> CCTCAATTGCTGTAAGAAACAGAGAGGCTTTGTCTGGCAGCACAATCCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- CCTCAATTGCTGTAAGAAACAGAGAGGCTTTGTCTGGCAGCACAATCCCG
EX905632       <-- CCTCAATTGCTGTAAGAAACAGAGAGGCTTTGTCTGGCAGCACAATCCCG
EV566311       <-- CCTCAATTGCTGTAAGAAACAGAGAGGCTTTGTCTGGCAGCATAATCCCG
FY441673       <-- CCTCAATTGCTGTAAGAAACAGAGAGGCCTTGTCTGGCAGCACAATCCCG
EX772592       <-- ..................................................
EV571472       --> CCTCAATTGCTGTAAGAAACAGAGAGGCTTTGTCTGGCAGCATAATCCCG
FD574206       --> ..................................................
FD944951       --> ..................................................
EX752651       --> CCTCAATTGCTGTAAGAAACAGAGAGGCTTTGTCTGGCAGCACAATCCCG

               751    -    801
UN20642        --> CCATCAACAAGCCATTTATTACGAGCGTAGAGGACACTGTCCAACATATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- CCATCAACAAGCCATTTATTACGAGCGTAGAGGACACTGTCCAACATATT
EX905632       <-- CCATCAACAAGCCATTTATTACGAGCGTAGAGGACACTGTCCAACATATT
EV566311       <-- CCATCAACAAGCCATTTATTACGAGCGTAGAGGACACTGTCCAACATATT
FY441673       <-- CCATCAACAAGCCATTTATTACGAGCGTAGAGGACACTGTCCAACATATT
EX772592       <-- ....................tacgGCGTAGAGGACACTGTCCAACATGTT
EV571472       --> CCATCAACAAGCCATTTATTACGAGCGTAGAGGACACTGTCCAACATATT
FD574206       --> ..................................................
FD944951       --> ..................................................
EX752651       --> CCATCAACAAGCCATTTATTGCGAGCGTATAGGACACTGTCCAACATATT

               801    -    851
UN20642        --> TTCAAACAACAAAAAGTAGCCCATCCATTCAGATATAATCACATCCACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- TTCAAACAACAAAAA...................................
EX905632       <-- TTCAAACAACAAAAAGTAGCCCATCCATTCAGATATAATCACATCCACTT
EV566311       <-- TTCAAACAACAAAAAGTAGCCCATCCATTCAGATATAATCACATCCACTT
FY441673       <-- TTCAAACAACAAAAAGTAACCCATCCATTCAGATATAATCACATCCACTT
EX772592       <-- T-CAAACAACAAAAAGTAGCCCATCCATTCAGATATAATCACATCCACTT
EV571472       --> TTCAAA............................................
FD574206       --> ..................................................
FD944951       --> ..................................................
EX752651       --> TTCAAACAACAAAA-GTAGCCC............................

               851    -    901
UN20642        --> TAGGAGTGGGAAGCTCTATCTCCTCAATCTTCCCTTTCAAAACCGTTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- ..................................................
EX905632       <-- TAGGAGTGGGAAGCTCTATCTCCTCAATCTTCCCTTTCAAAACCGTTATC
EV566311       <-- TAGGAGTGGGAAGCTCTATCTCCTCAATCTTCCCTTTCAAAACCGTTATC
FY441673       <-- TAGGAGTGGGAAGCTCTATCTCCTCAATCTTCCCTTTCAAAACAGTTATC
EX772592       <-- TAGGAGTGGGAAGCTCTATCTCCTCAATCTTTCCTTTCAAAACAGTTATC
EV571472       --> ..................................................
FD574206       --> ..................................................
FD944951       --> ..................................................
EX752651       --> ..................................................

               901    -    951
UN20642        --> ACATCAGAAAAGCCATTGGCTTTAACAATCTCCTTTGCCATGTCAGCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- ..................................................
EX905632       <-- c.................................................
EV566311       <-- ACATCAGAAAAGCCATTGGCTTTAACAATCTCCTTTGCCATGTCAGCCAT
FY441673       <-- ACATCAGAAAAGCCATTGGCTTTAACAATCTCCTTTGCCATGTCAGCCAT
EX772592       <-- ACATCAGAAAAGCCATTGGCTTTAACAATCTCCTTTGCCATGTCAGCCAT
EV571472       --> ..................................................
FD574206       --> ..................................................
FD944951       --> ..................................................
EX752651       --> ..................................................

               951    -   1001
UN20642        --> TTGAGAACACTCAACAGCATAGACATGTTTAGCTCCAGCCTTGGCACAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- ..................................................
EX905632       <-- ..................................................
EV566311       <-- TTGAGAACACTCAACAGCATAGACATGTTTAGCTCCAGCCTTGGCACAGA
FY441673       <-- TTGAGAACACTCAACAGCATAGACATGTTTAGCTCCAGCCTTGGCACAGA
EX772592       <-- TTGAGAACACTCAACAGCATAGACATGTTTAGCTCCAGCCTTGGCACAGA
EV571472       --> ..................................................
FD574206       --> ..................................................
FD944951       --> ..................................................
EX752651       --> ..................................................

               1001   -   1051
UN20642        --> AGAGAGACAAGATTCCTGTCCCAGCTCCAACATCAAGAACAATTTTGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- ..................................................
EX905632       <-- ..................................................
EV566311       <-- AGAGAGGCAAGATCCCTGTCCCAGCTCCAACATCAAGAACAATTTTGTCC
FY441673       <-- AGAGAGACAAGATTCCTGTCCCAGCTCCAACATCAAGAACAATTTTGTCC
EX772592       <-- AGAGAGACAAGATTCCTGTCCCAGCTCCAACATCAAGAACAATTTTGTCC
EV571472       --> ..................................................
FD574206       --> ..................................................
FD944951       --> ..................................................
EX752651       --> ..................................................

               1051   -   1101
UN20642        --> TTGATGAGAAACTTGTTTTGGTAAATTACATTCTGATAAGTCTTTGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- ..................................................
EX905632       <-- ..................................................
EV566311       <-- TTGATGAGAAACTTGTTTTGGTAAATTACATTCc................
FY441673       <-- TTGATGAGAAACTTGTTTTGGTAAATTACATTCTGATAAGTCTTTGTTCT
EX772592       <-- TTGATGAGAAACTTGTTTTGGTAAATTACATTCTGATAAGTCTTTGTTCT
EV571472       --> ..................................................
FD574206       --> ..................................................
FD944951       --> ..................................................
EX752651       --> ..................................................

               1101   -   1151
UN20642        --> CACTACATCCTTCAACATCTCTTCATGAATTCCGAAGTGAGAGTAGGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- ..................................................
EX905632       <-- ..................................................
EV566311       <-- ..................................................
FY441673       <-- CACTACATCCTTCAACATCTCTTCATGAATTCCGAAGTGAGAGTAGGAAT
EX772592       <-- CACTACATCCTTCAACATCTCTTCATGAATTCCGAAGTGAGAGTAGGAAT
EV571472       --> ..................................................
FD574206       --> ..................................................
FD944951       --> ..................................................
EX752651       --> ..................................................

               1151   -   1201
UN20642        --> CGAAGTAGTAATCGGCGCTGGTGGTATCATCAGTGACTTCAGCTGCATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- ..................................................
EX905632       <-- ..................................................
EV566311       <-- ..................................................
FY441673       <-- CGAAGTAGTAATCGGCGCTGGTGGTATCATCAGTGACTTCAGCTGCATCG
EX772592       <-- CGAAGTAGTAATCGGCGCTGGTGGTATCATCAGTGACTTCA---GCATCG
EV571472       --> ..................................................
FD574206       --> ..................................................
FD944951       --> ..................................................
EX752651       --> ..................................................

               1201   -   1251
UN20642        --> TTGCTCTCTCCTGCGTCGCACATGGATTCATCTTGTCCGGCTTCCAGACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- ..................................................
EX905632       <-- ..................................................
EV566311       <-- ..................................................
FY441673       <-- TTGCTCTCTCCTGCGTCGCACATGGATTCATCTTGGCCGGCTTCCAGACC
EX772592       <-- TTGCTCTCTCCTGCGTCGCACATGGATTCATCTTGTCCGGCTTCCAGACC
EV571472       --> ..................................................
FD574206       --> ..................................................
FD944951       --> ..................................................
EX752651       --> ..................................................

               1251   -   1301
UN20642        --> GGAGCCTTCTGCGACTTCGTCTTCATCAGCATCTTCAAAGCGTATCTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- ..................................................
EX905632       <-- ..................................................
EV566311       <-- ..................................................
FY441673       <-- GGAGCCTTCTGCAACTTCGTCTTCATCAGCATCTTCAAAGCGTATCTTCG
EX772592       <-- GGAGCCTTCTGCGACTTCGATTTCATCAGCATCTTCAAAGCGTATCTTCG
EV571472       --> ..................................................
FD574206       --> ..................................................
FD944951       --> ..................................................
EX752651       --> ..................................................

               1301   -   1351
UN20642        --> TGTTCAGGTTGTGTCCGAAGCTGATAAACTCCTCTTCCTTGTTGTTGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- ..................................................
EX905632       <-- ..................................................
EV566311       <-- ..................................................
FY441673       <-- TGTTCAGGTTGTGTCCGAAGCTGATAAACTCCTCTTCCTCGTTGTTGTTG
EX772592       <-- TGTTCAGGTTGTGTCCGAAGCTGATAAACTCCTCTTCCTTGTTGTTGTTG
EV571472       --> ..................................................
FD574206       --> ..................................................
FD944951       --> ..................................................
EX752651       --> ..................................................

               1351   -   1401
UN20642        --> TTGTTATTCTTAGTCATGGTTTTCTTCTTAGGTTTCACACACGAGGGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- ..................................................
EX905632       <-- ..................................................
EV566311       <-- ..................................................
FY441673       <-- TTGTTATTCTTAGTCATGGTTTTCTTCTTAGGTTTCACACACGAGGGAAG
EX772592       <-- TTGTTATTCTTAGTCATGGTTTTCTTCTTAGGTTTCACACACGAGGGAAG
EV571472       --> ..................................................
FD574206       --> ..................................................
FD944951       --> ..................................................
EX752651       --> ..................................................

               1401   -   1451
UN20642        --> AGAGAGGAAGAGAGAGAAAACGGAGTAAAGAGAGAGAAGGGTTTTGGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- ..................................................
EX905632       <-- ..................................................
EV566311       <-- ..................................................
FY441673       <-- AGAGAGGAAGAGAGAGAAAACGGAGTAAAGAGAGAGAAG...........
EX772592       <-- AGAGAGGAAGAGAGAGAAAACGGAGTAAAGAGAGAGAAGGGTTTTGGAGA
EV571472       --> ..................................................
FD574206       --> ..................................................
FD944951       --> ..................................................
EX752651       --> ..................................................

               1451   -   1501
UN20642        --> TAGACGCGAAGTGCAAAGATTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~
FD570139       <-- .......................
EX905632       <-- .......................
EV566311       <-- .......................
FY441673       <-- .......................
EX772592       <-- TAGACGCGAAGTGCAAAGATTCC
EV571472       --> .......................
FD574206       --> .......................
FD944951       --> .......................
EX752651       --> .......................