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Alignment for radish unigene UN20814

               1      -     51
UN20814        --> CCTTCCATCAATATGCCAAATTTCTTATTCATTCACAATAAACTGAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564240       <-- ..................................................
EY907759       <-- ..................................................
EY913641       <-- ..................................................
EV552583       <-- ..................................................
EW715974       <-- ..................................................
FD580391       <-- ..................................................
FY443752       <-- ..................................................
EY909842       --> CCTTCCATCAATATGCCAAATTTCTTATTCATTCACAATAAACTGAAAGA
EY903619       --> ....CCATCAATATGCCAAATTTCTTATTCATTCACAATAAACTGAAAGA
EX767799       --> ............ATGCCAAATTTCTTATTCATTCGCAATAAATTGAAAGA
EW719605       --> ..................................................
FD567771       --> ..................................................
EV547471       --> ..................................................
EW728945       --> ..................................................

               51     -    101
UN20814        --> TACGAAACCCCATCTGTAGTCCTTACGATCTTTCGACGAACCAAAATGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564240       <-- ..................................................
EY907759       <-- ..................................................
EY913641       <-- ..................................................
EV552583       <-- ..................................................
EW715974       <-- ..................................................
FD580391       <-- ..................................................
FY443752       <-- ..................................................
EY909842       --> TACGAAACCCCATCTGTAGTCCTTACGATCTTTCGACGAACCAAAATGCA
EY903619       --> TACGAAACCCCATCTGTAGTCCTTACGATCTTTCGACGAACCAAAATGCA
EX767799       --> TACGAAACCCCATCTGTAGTCCTTACGATCTTTCGACGAACCAAAATGCA
EW719605       --> ..................................................
FD567771       --> ..................................................
EV547471       --> ..................................................
EW728945       --> ..................................................

               101    -    151
UN20814        --> AGAAGAGTAAAAAAATACCATTACCATTTGTCCCCTACATATCTAATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564240       <-- ..agGAGTAAAAAAATACCATTACCATTTGTCCCCTACATATCTAATCAA
EY907759       <-- ......................................ATATCTAATCAA
EY913641       <-- ..................................................
EV552583       <-- ..................................................
EW715974       <-- ..................................................
FD580391       <-- ..................................................
FY443752       <-- ..................................................
EY909842       --> AGAAGAGTAAAAAAATACCATTACCATTTGTCCCCTACATATCTAATCAA
EY903619       --> AGAAGAGTAAAAAAATACCATTACCATTTGTCCCCTACATATCTAATCAA
EX767799       --> AGAAGAGTAAAAAA-TACCATTACCATTTGTCCCCTACATATCTAATCAA
EW719605       --> ..AAGAGTAAAAAAATACCATTACCATTTGTCCCCTACATATCTAATCAA
FD567771       --> ..agGAGTAAAAAAATACCATTACCATTTGTCCCCTACATATCTAATCAA
EV547471       --> ..................................................
EW728945       --> ..................................................

               151    -    201
UN20814        --> ATACTTAAAATGAAACTATTTTGTAGCTCCGCCGAAACCAAAGTGTGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564240       <-- ATACTTAAAATGAAACTATTTTGTAGCTCCGCCGAAACCAAAGTGTGCCT
EY907759       <-- ATACTTAAAATGAAACTATTT-GTAGCTCCGC-GAAACCAAAGTGTGCCT
EY913641       <-- ..ACTTAAAATGAAACTATTT-GTAGCTCCGC-GAAACCAAAGTGTGC-T
EV552583       <-- ..............................................GCCT
EW715974       <-- ..................................................
FD580391       <-- ..................................................
FY443752       <-- ..................................................
EY909842       --> ATACTTAAAATGAAACTATTTTGTAGCTCCGCCGAAACCAAAGTGTGCCT
EY903619       --> ATACTTAAAATGAAACTATTTTGTAGCTCCGCCGAAACCAAAGTGTGCCT
EX767799       --> ATACTTAAAATGAAACTATTTTGTAGCTCCGCCGAAACCAAAGTGTGCCT
EW719605       --> ATACTTAAAATGAAACTATTTTGTAGCTCCGCCGAAACCAAAGTGTGCCT
FD567771       --> ATACTTAAAATGAAACTATTTTGTAGCTCCGCCGAAACCAAAGTGTGCCT
EV547471       --> ..............................................GCCT
EW728945       --> ..................................................

               201    -    251
UN20814        --> TAAAAATGAAATTAAATTTTCATATAAAAAACCGACGCACTTATTTTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564240       <-- TAAAAATGAAATTAAATTTTCATATAAAAAACCGACGCACTTATTTTAAC
EY907759       <-- -AAAAATGAAATTAAATTTTCATATAAAAA-CCGACGCACTTATTTTAAC
EY913641       <-- TAAAAATGAAATTAAATTTTCATATAAAAAACCGACGCACTTATTTTAAC
EV552583       <-- TAAAAATGAAATTAAATTTTCATATAAAAAACCGACGCACTTATTTTAAC
EW715974       <-- ...AAATGAAATTAAATTTTCATATAAAAAACCGACGCACTTATTTTAAC
FD580391       <-- ..................................................
FY443752       <-- ..................................................
EY909842       --> TAAAAATGAAATTAAATTTTCATATAAAAAACCGACGCACTTATTTTAAC
EY903619       --> TAAAAATGAAATTAAATTTTCATATAAAAAACCGACGCACTTATTTTAAC
EX767799       --> TAAAAATGAAATTAAATTTTCATATAAAAAACCGACGCACTTATTTTAAC
EW719605       --> TAAAAATGAAATTAAATTTTCATATAAAAAACCGACGCACTTATTTTAAC
FD567771       --> TAAAAATGAAATTAAATTTTCATATAAAAAACCGACGCACTTATTTTAAC
EV547471       --> TAAAAATGAAATTAAATTTTCATATAAAAAACCGACGCACTTATTTTAAC
EW728945       --> aAAAAATGAAATTAAATTTTCATATAAAAAACCGACCCACTTGATTTAAC

               251    -    301
UN20814        --> TTTTTAATTGGCCTTTTCCTTTTTCCCCCAAGATTTATCCTTAAGATTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564240       <-- TTTTTAATTGGCCTTTTCCTTTT-CCCCCAAGATTTATCCTTAAGATTTC  Raphanus sativus var. oleiformis
EY907759       <-- TTTT-AATTGGCCTTTTCCTTTTTCCCCCA-GATTTATCCTTAAGATTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913641       <-- TTTTTAATTGGCCTTTTCCTTTTTCCCCCA-GATTTATCCTTAAGATTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552583       <-- TTTTTAATTGGCCTTTTCCTTTTTCCCCCA-GATTTATCCTTAAGATTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715974       <-- TTTTTAATTGGCCTTT-CCTTTT-CCCCCAAGATTTATCCTTAAGATTTC  Raphanus sativus var. oleiformis
FD580391       <-- .......................TCCCCCAAGATTTATC-TTAAGATTTC  Raphanus sativus cv Rat-Tail Radish #3870
FY443752       <-- ................................ATTTATCCTTAAGATTTC  Raphanus sativus cv GSK3-1
EY909842       --> TTTTTAATTGGCCTTTTCCTTTTTCCCCCA-GATTTATCCTTAAGATTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903619       --> TTTTTAATTGGCCTTTTCCTTTTTCCCCCA-GATTTATCCTTAAGATTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX767799       --> TTTTTAATTGGCCTTTTCCTTTT-CCCCCAAGATTTATCCTTAAGATTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719605       --> TTTTTAATTGGCCTTTTCCTTTT-CCCCCAAGATTTATCCTTAAGATTTC  Raphanus sativus var. oleiformis
FD567771       --> TTTTTAATTGGCCTTTTCCTTTT-CCCCCAAGATTTATCCTTAAGATTTC  Raphanus sativus var. oleiformis
EV547471       --> TTTTTAATTGGCCTTTTCCTTTTTCCCCCA-GATTTATCCTTAAGATTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728945       --> TTTTTAATTGGCCTTTTCCTTTTTCCCCCA-GATTTATCCTTAAGATTTC  Raphanus sativus cv Early Scarlet Globe

               301    -    351
UN20814        --> TACAAGAACAGTTCAGATTGGAGCAACGCGTAATAATTAGCAGCTTCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564240       <-- TACAAGAACAGTTCAGATTGGAGCAACGCGTAATAATTAGCAGCTTCATC
EY907759       <-- TACAAGAACAGTTCAGATTGGAGCAACGCGTAATAATTAGCAGCTTCATC
EY913641       <-- TACAAGAACAGTTCAGATTGGAGCAACGCGTAATAATTAGCAGCTTCATC
EV552583       <-- TACAAGAACAGTTCAGATTGGAGCAACGCGTAATAATTAGCAGCTTCATC
EW715974       <-- TACAAGAACAGTTCAGATTGGAGCAACGCGTAATAATTAGCAGCTTCATC
FD580391       <-- TACAAGAACAGTTCAGATTGGAGCAACGCGTAATAATTAGCAGCTTCATC
FY443752       <-- TACAAGAACAGTTCAGATTGGAGCAACGCGTAATAATTAGCAGCTTCATC
EY909842       --> TACAAGAACAGTTCAGATTGGAGCAACGCGTAATAATTAGCAGCTTCATC
EY903619       --> TACAAGAACAGTTCAAATTGGAGCAACGCGTAATAATTAGCAGCTTCATC
EX767799       --> TACAAGAACAGTTCAGATTGGAGCAACGCGTAATAATTAGCAGCTTCATC
EW719605       --> TACAAGAACAGTTCAGATTGGAGCAACGCGTAATAATTAGCAGCTTCATC
FD567771       --> TACAAGAACAGTTCAAATTGGAGCAACGCGTAATAATTAGCAGCTTCATC
EV547471       --> TACAAGAACAGTTCAGATTGGAGCAACGCGTAATAATTAGCAGCTTCATC
EW728945       --> TACAAGAACAGTTCAGATTGGAGCAACGCGTAATAATTAGCAGCTTCATC

               351    -    401
UN20814        --> TTCAAGCTCCCAAAACGCATCACCAAACCCATCTAACAAATTATCTCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564240       <-- TTCAAGCTCCCAAAACGCATCTCCAAACCCATCTAc..............  Raphanus sativus var. oleiformis
EY907759       <-- TTCAAGCTCCCAAAACGCATCACCAAACCCATCTAACAAACTATCTCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913641       <-- TTCAAGCTCCCAAAACGCATCACCAAACCCATCTAACAAATTATCTCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552583       <-- TTCAAGCTCCCAAAACGCATCACCAAACCCATCTAACAAATTATCTCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715974       <-- TTCAAGCTCCCAAAACGCATCACCAAACCCATCTAACAAATTATCCCCAC  Raphanus sativus var. oleiformis
FD580391       <-- TTCAAGCTCCCAAAACGCATCACCAAACCCATCTAACAAATTATCTCCAC  Raphanus sativus cv Rat-Tail Radish #3870
FY443752       <-- TTCAAGCTCCCAAAACGCATCACCAAACCCATCTAACAAATTATCTCCAC  Raphanus sativus cv GSK3-1
EY909842       --> TTCAAGCTCCCAAAACGCATCACCAAACCCATCTAACAAATTATCTCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903619       --> TTCAAGCTCCCAAAACGCATCACCAAACCCATCTAACAAACTATCTCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX767799       --> TTCAAGCTCCCAAAACGCATCACCAAACCCATCTAACAAATTATCTCCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719605       --> TTCAAGCTCCCAAAACGCATCACCAAACCCATCTAACAAATTATCCCCAC  Raphanus sativus var. oleiformis
FD567771       --> TTCAAGCTCCCAAAACGCATCTCCAAACCCATCTAc..............  Raphanus sativus var. oleiformis
EV547471       --> TTCAAGCTCCCAAAACGCATCACCAAACCCATCTAACAAATTATCTCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728945       --> TTCAAGCTCCCAAAACGCATCACCAAGCCCATCTAACAAATTATCTCCAT  Raphanus sativus cv Early Scarlet Globe

               401    -    451
UN20814        --> AAACATAATCTTGACTAATTTCATTCTTAATCATCTCATAATGACTCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564240       <-- ..................................................  Raphanus sativus var. oleiformis
EY907759       <-- AAACATAATCTTGACTAATTTCATTCTTAATCATCTCATAATGACTCTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913641       <-- AAACATAATCTTGACTAATTTCATTCTTAATCATCTCATAATGACTCTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552583       <-- AAACATAATCTTGACTAATTTCATTCTTAATCATCTCATAATGACTCTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715974       <-- AAACATAATCTTGACTAATTTCATTCTTAATCATCTCATAATTACTCTCG  Raphanus sativus var. oleiformis
FD580391       <-- AAACATAATCTTGACTAATTTCATTCTTAATCATCTCATAATTACTCTCG  Raphanus sativus cv Rat-Tail Radish #3870
FY443752       <-- AAACATAATCTTGACTAATTTCATTCTTAATCATCTCATAATTACTCTCG  Raphanus sativus cv GSK3-1
EY909842       --> AAACATAATCTTGACTAATTTCATTCTTAATCATCTCATAATGACTCTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903619       --> AAACATAATCTTGACTAATTTCATTCTTAATCATCTCATAATGACTCTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX767799       --> AAACATAATCTTGACTAATTTCATTCTTAATCATCTCATAATTACTCTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719605       --> AAACATAATCTTGACTAATTTCATTCTTAATCATCTCATAATTACTCTCG  Raphanus sativus var. oleiformis
FD567771       --> ..................................................  Raphanus sativus var. oleiformis
EV547471       --> AAACATAATCTTGACTAATTTCATTCTTAATCATCTCATAATGACTCTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728945       --> AAACATAATCTTGACTAATTTCATTCTTAATCATCTCATAATGACTCTCG  Raphanus sativus cv Early Scarlet Globe

               451    -    501
UN20814        --> CCAAATTCGTTGTTAGGGAGCCCAAGTTCGTCGTCAGAAGCTTCCAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564240       <-- ..................................................  Raphanus sativus var. oleiformis
EY907759       <-- CCAAATTCGTTGTTAGGGAGCCCAAGTTCGTCGTCAGAAGCTTCCAAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913641       <-- CCAAATTCGTTGTTAGGGAGCTCAAGTTCGTCGTCAGAAGCTTCCAAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552583       <-- CCAAATTCGTTGTTAGGGAGCCCAAGTTCGTCGTCAGAAGCTTCCAAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715974       <-- CCAAATTCGTTGCTAGGGAGCCCAAGTTCGTCGTCAGAAGCTTCCAAAAG  Raphanus sativus var. oleiformis
FD580391       <-- CCAAATTCGTTGCTAGGGAGCCCAAGTTCGTCGTCAGAAGCTTCCAAAAG  Raphanus sativus cv Rat-Tail Radish #3870
FY443752       <-- CCAAATTCGTTGCTAGGGAGCCCAAGTTCGTCGTCAGAAGCTTCCAAAAG  Raphanus sativus cv GSK3-1
EY909842       --> CCAAATTCGTTGTTAGGGAGCTCAAGTTCGTCGTCAGAAGCTTCCAAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903619       --> CCAAATTCGTTGTTAGGGAGCCCAAGTTCGTCGTCAGAAGCTTCCAAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX767799       --> CCAAATTCGTTGCTAGGGAGCCCAAGTTCGTCGTCAGAAGCTTCCAAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719605       --> CCAAATTCGTTGCTAGGGAGCCCAAGTTCGTCGTCAGAAGCTTCCAAAAG  Raphanus sativus var. oleiformis
FD567771       --> ..................................................  Raphanus sativus var. oleiformis
EV547471       --> CCAAATTCGTTGTTAGGGAGCCCAAGTTCGTCGTCAGAAGCTTCCAAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728945       --> CCAAATTCGTTGTTAGGGAGCCCAAGTTAGTCGTCAGAAGCTTCCAAAAG  Raphanus sativus cv Early Scarlet Globe

               501    -    551
UN20814        --> ATGCTGCATCACTGTCTCCTTGGTCTCTTCATCAACATCGTCTTCCTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564240       <-- ..................................................  Raphanus sativus var. oleiformis
EY907759       <-- ATGCTGCATCACTGTCTCCTTGGTCTCTTCATCAACATCGTCTTCCTTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913641       <-- ATGCTGCATCACTGTCTCCTTGGTCTCTTCAACAACATCGTCTTCCTTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552583       <-- ATGCTGCATCACTGTCTCCTTGGTCTCTTCATCAACATCGTCTTCCTTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715974       <-- ATGCTGCATCACTGTCTCCTTGGCCTCTTCATCAACATCGTCTTCCTTCG  Raphanus sativus var. oleiformis
FD580391       <-- ATGCTGCATCACTGTCTCCTTGGCCTCTTCATCAACATCGTCTTCCTTCG  Raphanus sativus cv Rat-Tail Radish #3870
FY443752       <-- ATGCTGCATCACTGTCTCCTTGGCCTCTTCATCAACATCGTCTTCCTTCG  Raphanus sativus cv GSK3-1
EY909842       --> ATGCTGCATCACTGTCTCCTTGGTCTCTTCAACAACATCGTCTTCCTTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903619       --> ATGCTGCATCACTGTCTCCTTGGTCTCTTCATCAACATCGTCTTCCTTCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX767799       --> ATGCTGCATCACTGTCTCCTTGGCCTCTTCATCAACATCGTCTTCCTTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719605       --> ATGCTGCATCACTGTCTCCTTGGCCTCTTCATCAACATCGTCTTCCTTCG  Raphanus sativus var. oleiformis
FD567771       --> ..................................................  Raphanus sativus var. oleiformis
EV547471       --> ATGCTGCATCACTGTCTCCTTGGTCTCTTCATCAACATCGTCTTCCTTCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728945       --> ATGCTGCATCACTGTCTCCTTGGTCGCTTCATCAACATCGTCTTCCTTCG  Raphanus sativus cv Early Scarlet Globe

               551    -    601
UN20814        --> AGGAAACACACGAAGTCGACGAATCTTCCACGTTAGAGACTCTAGAAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564240       <-- ..................................................
EY907759       <-- AGGAAACACACGAAGTCGACGAATCTTCCACGTTAGAGACTCTAGAAAGG
EY913641       <-- AGGAAACACACGAAGTCGACGAATCTTCCACGTTAGAGACTCTAGAAAGG
EV552583       <-- AGGAAACACACGAAGTCGACGAATCTTCCACGTTAGAGACTCTAGAAAGG
EW715974       <-- AGGAAACACACGAAGTCGACGAATCTTCCACGTTAGAGACTCTAGAAAGG
FD580391       <-- AGGAAACACACGAAGTCGACGAATCTTCCACGTTAGAGACTCTAGAAAGG
FY443752       <-- AGGAAACACACGAAGTCGACGAATCTTCCACGTTAGAGACTCTAGAAAGG
EY909842       --> AGGAAACACACGAAGTCGACGAATCTTCCACGTTAGAGACTCTAGAAAGG
EY903619       --> AGGAAACACACGAAGTCGACGAATCTTCCACGTTAGAGACTCTAGAAAGG
EX767799       --> AGGAAACACACGAAGTCGACGAATCTTCCACGTTAGAGACTCTAGAAAGG
EW719605       --> AGGAAACACACGAAGTCGACGAATCTTCCACGTTAGAGACTCTAGAAAGG
FD567771       --> ..................................................
EV547471       --> AGGAAACACACGAAGTCGACGAATCTTCCACGTTAGAGACTCTAGAAAGG
EW728945       --> AGGAAACACACGAAGTCGACGAATCTTCCACGTTAGAGACTCTAGAAAGG

               601    -    651
UN20814        --> ACACCGTTTTGGTCATCTGATGAGATATCTTGCTGGAGAGAGTTTAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564240       <-- ..................................................
EY907759       <-- ACACCGTTTTGGTCATCTGATGAGATATCTTGCTGGAGAGAGTTTAAAAA
EY913641       <-- ACACCGTTTTGGTCATCTGATGAGATATCTTGCTGGAGAGAGTTTAAAAA
EV552583       <-- ACACCGTTTTGGTCATCTGATGAGATATCTTGCTGGAGAGAGTTTAAAAA
EW715974       <-- ACACCGTTTTGGTCATCTGATGAGATATCTTGCTGGAGAGAGTTTAAAA-
FD580391       <-- ACACCGTTTTGGTCATCTGATGAGATATCTTGCTGGAGAGAGTTTAAAAA
FY443752       <-- ACACCGTTTTGGTCATCTGATGAGATATCTTGCTGGAGAGAGTTTAAAAA
EY909842       --> ACACCGTTTTGGTCATCTGATGAGATATCTTGCTGGAGAGAGTTTAAAAA
EY903619       --> ACACCGTTTTGGTCATCTGATGAGATATCTTGCTGGAGAGAGTTTAAAAA
EX767799       --> ACACCGTTTTGGTCATCTGATGAGATATCTTGCTGGAGAGAGTTTAAAAA
EW719605       --> ACACCGTTTTGGTCATCTGATGAGATATCTTGCTGGAGAGAGTTTAAAA-
FD567771       --> ..................................................
EV547471       --> ACACCGTTTTGGTCATCTGATGAGATATCTTGCTGGAGAGAGTTTAAAAA
EW728945       --> ACACCGTTTTGGTCATCTGATGAGATATCTTGCTGGAGAGAGTTTAAAAA

               651    -    701
UN20814        --> TGAAGTTAGGTCATTGTTAGGTTGGTTAAGTTCGTCTGAATCGTTGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564240       <-- ..................................................
EY907759       <-- TGAAGTTAGGTCATTGTTAGGTTGGTTAAGTTCGTCTGAATCGTTGAGGA
EY913641       <-- TGAAGTTAGGTCATTGTTAGGTTGGTTAAGTTCGTCTGAATCGTTGAGGA
EV552583       <-- TGAAGTTAGGTCATTGTTAGGTTGGTTAAGTTCGTCTGAATCGTTGAGGA
EW715974       <-- TGAAGTTAGGTCATTGTTAGGTTGGTCAAGTTCGTCTGAATCGTTGAGGA
FD580391       <-- TGAAGTTAGGTCATTGTTAGGTTGGTTAAGTTCGTCTGAATCGTTGAGGA
FY443752       <-- TGAAGTTAGGTCATTGTTAGGTTGGTTAAGTTCGTCTGAATCGTTGAGGA
EY909842       --> TGAAGTTAGGTCATTGTTAGGTTGGTTAAGTTCGTCTGAATCGTTGAGGA
EY903619       --> TGAAGTTAGGTCATTGTTAGGTTGGTTAAGTTCGTCTGAATCGTTGAGGA
EX767799       --> TGAAGTTAGGTCATTGTTAGGTTGGTTAAGTTCGTCTGAATCGTTGAGGA
EW719605       --> TGAAGTTAGGTCATTGTTAGGTTGGTCAAGTTCGTCTGAATCGTTGAGGA
FD567771       --> ..................................................
EV547471       --> TGAAGTTAGGTCATTGTTAGGTTGGTTAAGTTCGTCTGAATCGTTGAGGA
EW728945       --> TGAAGTTAGGTCATTGTTAGGTTGGTTAAGTTTGTCTGAATCGTTGAGGA

               701    -    751
UN20814        --> GACTGAGGATCTGGTCGTTGTGTGAGGAAAAGGATGATGTAGAGGGCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564240       <-- ..................................................
EY907759       <-- GACTGAGGATCTTGTCGTTGTGTGAGGAAAAGGATGATGTAGAGGGCTTT
EY913641       <-- GACTGAGGATCTTGTCGCTGTGTGAGGAAAAGGATGATGTAGAGGGCTTT
EV552583       <-- GACTGAGGATCTTGTCGTTGTGTGAGGAAAAGGATGATGTAGAGGGCTTT
EW715974       <-- GACTGAGGATCTGGTCGTTGTGTGAGGAAAAGGATGATGTAGAGGGCTTT
FD580391       <-- GACTGAGGATCTGGTCGTTGTGTGAGGAAAAGGATGATGTAGAGGGCTTT
FY443752       <-- GACTGAGGATCTGGTCGTTGTGTGAGGAAAAGGATGATGTAGAGGGCTTT
EY909842       --> GACTGAGGATCTTGTCGCTGTGTGAGGA......................
EY903619       --> GAC...............................................
EX767799       --> GACTGAGGATCTGGTCGTTGTGTGAGGAAAAGGATGATGTAGAGGGCTTT
EW719605       --> GACTGAGGATCTGGTCGTTGTGTGAGGAAAAGGATGATGTAGAGGGCTTT
FD567771       --> ..................................................
EV547471       --> GACTGAGGATCTTGTCGTTGTGTGAGGAAAAGGATGATGTAGAGGGCTTT
EW728945       --> GACTGAGGATCTGGTCGTTGTGTGAGGAAAAGGATGATGTAGAGGGCTTT

               751    -    801
UN20814        --> TGTCTTTTATTGGTTTCTTCTTCAGCTAGGGTTTCTTCTTCTCGGTGGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564240       <-- ..................................................  Raphanus sativus var. oleiformis
EY907759       <-- TGTCTTTTATTGGTTTCTTCTTCAGCTAGGCATTCTTCTTCTCGGTGGCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913641       <-- TGTCTTTTATTGGTTTCTTCTTCAGCTAGGCATTCTTCTTCTCGGTGGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552583       <-- TGTCTTTTATTGGTTTCTTCTTCAGCTAGGCATTCTTCTTCTCGGTGGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715974       <-- TGTCTTTTATTGGTTTCTTCTTCAGCTAGGGTTTCTTCTTCTCGGTGGCG  Raphanus sativus var. oleiformis
FD580391       <-- TGTCTTTTATTGGTTTCTTCTTCAGCTAGGGTTTCTTCTTCTCGGTGGCG  Raphanus sativus cv Rat-Tail Radish #3870
FY443752       <-- TGTCTTTTATTGGTTTCTTCTTCAGCTAGGGTTTCTTCTTCTCGGTGGCG  Raphanus sativus cv GSK3-1
EY909842       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903619       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX767799       --> TGTCTTTTATTGGTTTCTTCTTCAG.........................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719605       --> TGTCTTTTATTGGTTTCTTCTTCAGCTAGGGTTTCTTCTTCTCGGTGGCG  Raphanus sativus var. oleiformis
FD567771       --> ..................................................  Raphanus sativus var. oleiformis
EV547471       --> TGTCTTTTATTGGTTTCTTCTTCAGCTAGGCATTCTTCTTCTCGGTGGCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728945       --> TGTCTTTTATTGGTTTCTTTTTCAGCTAGGGTTTCTTCTTCTCGATGGCG  Raphanus sativus cv Early Scarlet Globe

               801    -    851
UN20814        --> CTTTAATGGAGTTGTTTCAGCCATTGTATTCAAGAAAAAGAGGGGGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564240       <-- ..................................................  Raphanus sativus var. oleiformis
EY907759       <-- CTTTAATGGAGTTGTTTCAGCCATTGTATTCAAGAAAAAGAGGGGGAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913641       <-- CTTTAATGGAGTTGTTTCAGCCATTGTATTCAAGAAAAAGAGGGGGAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552583       <-- CTTTAATGGAGTTGTTTCAGCCATTGTATTCAAGAAAAAGAGGGGGAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715974       <-- CTTTAATGGAGTTGTTTCAGCCATTGTATTCAAGAAAAAGAGGGAGAGAA  Raphanus sativus var. oleiformis
FD580391       <-- CTTTAATGGAGTTGTTTCAGCCATTGTATTCAAGAAAAAGGGGGAGAGAA  Raphanus sativus cv Rat-Tail Radish #3870
FY443752       <-- CTTTAATGGAGTTGTTTCAGCCATTGTATTCAAGAAAAAGAGGGAGAGAA  Raphanus sativus cv GSK3-1
EY909842       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903619       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX767799       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719605       --> CTTTAATGGAGTTGTTTCAGCCATTGTATTCAAGAAAAAGAGGGAGAGAA  Raphanus sativus var. oleiformis
FD567771       --> ..................................................  Raphanus sativus var. oleiformis
EV547471       --> CTTTAATGGAGTTGTTTCAGCCATTGTATTCAAGAAAAAGAGGGGGAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728945       --> CTTTAATGGAGTT.....................................  Raphanus sativus cv Early Scarlet Globe

               851    -    901
UN20814        --> AGAAGCTGTTATAAAATAGTGAGGTGTGGTCCGCGAAATGGAGAGTCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564240       <-- ..................................................
EY907759       <-- AGAAGCTGTTATAAAATAGTGAGGTGTcc.....................
EY913641       <-- AGAAGCTGTTATAAAATAGTGAGGTGTGGTCC..................
EV552583       <-- AGAAGCTGTTATAAAATAGTGAGGTGTGGTCC..................
EW715974       <-- AGAAGCTGTTATAAAATAGTGAGGTGTGGTCC..................
FD580391       <-- AGAAGCTGTTATAAAATAGTGAGGTGTGGTCC..................
FY443752       <-- AGAAGCTGTTATAAAATAGTGAGGTGTGGTAAGCGAAATGGAGAGTCTGA
EY909842       --> ..................................................
EY903619       --> ..................................................
EX767799       --> ..................................................
EW719605       --> AGAAGCTGTTATAAAATAGTGAGGTGTGGTCC..................
FD567771       --> ..................................................
EV547471       --> AGAAGCTGTTATAAAATAGTGAGGTGTGGTCC..................
EW728945       --> ..................................................

               901    -    951
UN20814        --> AATGTATATATAGAGATTATTTGGTCGAGATAGCTATATTTTTAGTATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564240       <-- ..................................................
EY907759       <-- ..................................................
EY913641       <-- ..................................................
EV552583       <-- ..................................................
EW715974       <-- ..................................................
FD580391       <-- ..................................................
FY443752       <-- AATGTATATATAGAGATTATTTGGTCGAGATAGCTATATTTTTAGTATCA
EY909842       --> ..................................................
EY903619       --> ..................................................
EX767799       --> ..................................................
EW719605       --> ..................................................
FD567771       --> ..................................................
EV547471       --> ..................................................
EW728945       --> ..................................................

               951    -   1001
UN20814        --> AACATTTAGTATCAAATATTATTTTAAAAGCCAAAATTTAGAGATCAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564240       <-- ..................................................
EY907759       <-- ..................................................
EY913641       <-- ..................................................
EV552583       <-- ..................................................
EW715974       <-- ..................................................
FD580391       <-- ..................................................
FY443752       <-- AACATTTAGTATCAAATATTATTTTAAAAGCCAAAATTTAGAGATCAAAT
EY909842       --> ..................................................
EY903619       --> ..................................................
EX767799       --> ..................................................
EW719605       --> ..................................................
FD567771       --> ..................................................
EV547471       --> ..................................................
EW728945       --> ..................................................

               1001   -   1051
UN20814        --> ATATATTGCTTTGTGCGTCTCAGAAAGGAGAAACATGTAAATGCTTTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564240       <-- ..................................................
EY907759       <-- ..................................................
EY913641       <-- ..................................................
EV552583       <-- ..................................................
EW715974       <-- ..................................................
FD580391       <-- ..................................................
FY443752       <-- ATATATTGCTTTGTGCGTCTCAGAAAGGAGAAACATGTAAATGCTTTTTC
EY909842       --> ..................................................
EY903619       --> ..................................................
EX767799       --> ..................................................
EW719605       --> ..................................................
FD567771       --> ..................................................
EV547471       --> ..................................................
EW728945       --> ..................................................

               1051   -   1101
UN20814        --> AAGTTTTCGCATTGAAATCCTAATTGCTTAATATTTAAAATTCTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564240       <-- ...............................................
EY907759       <-- ...............................................
EY913641       <-- ...............................................
EV552583       <-- ...............................................
EW715974       <-- ...............................................
FD580391       <-- ...............................................
FY443752       <-- AAGTTTTCGCATTGAAATCCTAATTGCTTAATATTTAAAATTCTGAT
EY909842       --> ...............................................
EY903619       --> ...............................................
EX767799       --> ...............................................
EW719605       --> ...............................................
FD567771       --> ...............................................
EV547471       --> ...............................................
EW728945       --> ...............................................