0      -     50
UN20844        --> .GGATTCTCAAAAGCCATGACTTCTCTCTCCATATCCTTCCTTTTAACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900988       <-- ..............................................ACTC
FD959514       <-- ..............................................ACTC
FD544775       <-- ..................................................
EW737764       <-- ..................................................
EX897178       --> .GGATTCTCAAAAGCCATGACTTCTCTCCCCATCTCCTTCCTTCTAACTC
FD963117       --> .GGATTCCCAAAAGCCATGACTTCTCTCTCCATATCCTTCCTTTTAACTC
FD964022       --> .GGATTCTCAAAAGCCATGACTTCTCTCTCCATATCCTTCCTTTTAACTC
FD940299       --> ggcATTCTCAAAAGCCATGACTTCTCTCTCCATATCCTTCCTTTTAACTC
EW732925       --> ..................................................

               50     -    100
UN20844        --> TCTGCCTCTTCGTAACCCCATCTCTCTCATCAGACTCTGACCCTTTACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900988       <-- TCTGCCTCTTCGTAACCCCATCCCTCTCATCAGACTCTGACCCTTTACAA  Raphanus sativus cv Early Scarlet Globe
FD959514       <-- TCTGCCTCTTCGTAACCCCATCTCTCTCATCAGACTCTGACCCTTTACAA  Raphanus raphanistrum subsp. maritimus
FD544775       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737764       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX897178       --> TCTGCCTCTTCGTAACCCCATCCCTCTCATCAGACTCTGACCCTTTACAA  Raphanus sativus cv Early Scarlet Globe
FD963117       --> TCTGCCTCTTCGTAACCCCATCTCTCTCATCAGACTCTGACCCTTTACAA  Raphanus raphanistrum subsp. maritimus
FD964022       --> TCTGCCTCTTCGTAACCCCATCTCTCTCATCAGACTCTGACCCTTTACAA  Raphanus raphanistrum subsp. maritimus
FD940299       --> TCTGCCTCTTCGTAACCCCATCCCTCTCATCAGACTCTAACCCTTTACAA  Raphanus sativus var. oleiformis
EW732925       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               100    -    150
UN20844        --> GACTTCTGCGTCGGCGATCTCAAAGCTTCTCCTTCCCTCAATGGCTTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900988       <-- GACTTTTGCGTCGGCGATCTCAAAGCTTCTCCTTCCCTCAATGGCTTCCC  Raphanus sativus cv Early Scarlet Globe
FD959514       <-- GACTTCTGCGTCGGCGATCTCAAAGCTTCTCCTTCCCTCAATGACTTCCC  Raphanus raphanistrum subsp. maritimus
FD544775       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737764       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX897178       --> GACTTTTGCGTCGGCGATCTCAAAGCTTCTCCTTCCCTCAATGGCTTCCC  Raphanus sativus cv Early Scarlet Globe
FD963117       --> GACTTCTGCGTCGGCGATCTCAAAGCTTCTCCTTCCCTCAATGACTTCCC  Raphanus raphanistrum subsp. maritimus
FD964022       --> GACTTCTGCGTCGGCGATCTCAAAGTTTCTCCTTCCCTCAATGACTTCCC  Raphanus raphanistrum subsp. maritimus
FD940299       --> GACTTCTGCGTCGGCGATCTCAAAGCTTCTCCTTCCCTCAATGGCTTCCC  Raphanus sativus var. oleiformis
EW732925       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               150    -    200
UN20844        --> TTGCAAGTCACCAGTCTCCGCTTCTGACTTCTTCTTTTCCGGCTTAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900988       <-- TTGCAAGTCACCAGTCTCCGCTTCTGACTTCTTCTTTTCCGGCTTAAGCA
FD959514       <-- TTGCAAGTCACCAGTCTCCGCTTCTGACTTCTTCTTTTCCGGCTTAAGCA
FD544775       <-- ...CAAGTCACCAGTCTCCGCTTCTGACTTCTTCTTTTCCGGCTTAAGCA
EW737764       <-- ..................................................
EX897178       --> TTGCAAGTCACCAGTCTCCGCTTCTGACTTCTTCTTTTCCGGCTTAAGCA
FD963117       --> TTGCAAGTCACCAGTCTCCGCTTCTGACTTCTTCTTTTCCGGCTTAAGCA
FD964022       --> TTGCAAGTCACCAGTCTCCGCTTCTGACTTCTTCTTTTCCGGCTTAAGCA
FD940299       --> TTGCAAGTCACCAGTCTCCGCTTCTGACTTCTTCTTTTCCGGCTTAAGCA
EW732925       --> ..................................................

               200    -    250
UN20844        --> TTCCTCTAAACACCTCAAACCGTAACGGCGTAGCCGTGGCCCCCGCCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900988       <-- TTCCTCTAAACACCTCAAACCGTAACGGCGTAGTCGTGGCCCCCGCCAAC  Raphanus sativus cv Early Scarlet Globe
FD959514       <-- TTCCTCTAAACACCTCAAACCGTAACGGCGTAGCCGTGGCCCCAGCCAAC  Raphanus raphanistrum subsp. maritimus
FD544775       <-- TTCCTCTAAACACCTCAAACCGTAACGGCGTAGCCGTGGCCCCCGCCAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737764       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX897178       --> TTCCTCTAAACACCTCAAACCGTAACGGCGTAGTCGTGGCCCCCGCCAAC  Raphanus sativus cv Early Scarlet Globe
FD963117       --> TTCCTCTAAACACCTCAAACCGTAACGGCGTAGCCGTGGCCCCAGCCAAC  Raphanus raphanistrum subsp. maritimus
FD964022       --> TTCCTCTAAACACCTCAAACCGTAACGGCGTAGCCGTGGCCCCAGCCAAC  Raphanus raphanistrum subsp. maritimus
FD940299       --> TTCCTCTAAACACCTCAAACCGTAACGGCGTAGCCGTGGCCCCCGCCAAC  Raphanus sativus var. oleiformis
EW732925       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               250    -    300
UN20844        --> GTCCTGACCTTTCCGGGTCTAAACACTTTAGGACTCTCGATGAACAACGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900988       <-- GTCCTGACCTTTCCGGGTCTAAACACTTTAGGACTCTCGATGAACAACGT
FD959514       <-- GTCCTGACCTTTCCGGGTCTAAACACTTTAGGACTCTCGATGAACAACGT
FD544775       <-- GTCCTGACCTTTCCGGGTCTAAACACTTTAGGACTCTCGATGAACAACGT
EW737764       <-- ..................................................
EX897178       --> GTCCTGACCTTTCCGGGTCTAAACACTTTAGGACTCTCGATGAACAACGT
FD963117       --> GTCCTGACCTTTCCGGGTCTAAACACTTTAGGACTCTCGATGAACAACGT
FD964022       --> GTCCTGACCTTTCCGGGTCTAAACACTTTAGGACTCTCGATGAACAACGT
FD940299       --> GTCCTGACCTTTCCAGGTCTAAACACTTTAGGACTCTCGATGAACAACGT
EW732925       --> ..................................................

               300    -    350
UN20844        --> CGAGTTCGCTCCAGGCGGTGTGAACCCTCCTCACTCGCACCCTCGTGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900988       <-- CGAGTTCGCTCCAGGCGGTGTGAACCCTCCTCACTCGCACCCTCGTGCAA
FD959514       <-- CGAGTTCGCTCCAGGCGGTGTGAACCCTCCTCACTCGCACCCTCGTGCAA
FD544775       <-- CGAGTTCGCTCCAGGCGGTGTGAACCCTCCTCACTCGCACCCTCGTGCAA
EW737764       <-- ..................................................
EX897178       --> CGAGTTCGCTCCAGGCGGTGTGAACCCTCCTCACTCGCACCCTCGTGCAA
FD963117       --> CGAGTTCGCTCCAGGCGGTGTGAACCCTCCTCACTCGCACCCTCGTGCAA
FD964022       --> CGAGTTCGCTCCAGGCGGTGTGAACCCTCCTCACTCGCACCCTCGTGCAA
FD940299       --> CGAGTTCGCTCCAGGCGGTGTGAACCCTCCTCACTCGCACCCTCGTGCAA
EW732925       --> ..................................................

               350    -    400
UN20844        --> CCGAAGCAGGAGTTGTGATCGAAGGCTCTGTTTTCGTCGGGTTCTT-GAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900988       <-- CCGAAGCAGGAGTTGTGATCGAAGGCTCTGTTTTCGTCGGGTTCTT-GAC
FD959514       <-- CCGAAGCAGGAGTTGTGATCGAAGGCTCTGTTTTCGTCGGTTTCTT-GAC
FD544775       <-- CCGAAGCAGGAGTTGTGATCGAAGGCTCTGTTTTCGTCGGGTTCTT-GGC
EW737764       <-- ...................................GTCGGGTTCTT-GAC
EX897178       --> CCGAAGCAGGAGTTGTGATCGAAGGCTCTGTTTTCGTCGGGTTCTT-GAC
FD963117       --> CCGAAGCAGGAGTTGTGATCGAAGGCTCTGTTTTCGTCGGTTTCTT-GAC
FD964022       --> CCGAAGCAGGAGTTGTGATCGAAGGCTCTGTTTTCGTCGGTTTCTT-GAC
FD940299       --> CCGAAGCAGGAGTTGTGATCGAAGGCTCTGTTTTCGTCGGGTTCTT-GAC
EW732925       --> ...................................GTCGGGTTCTTTGAC

               400    -    450
UN20844        --> CACGAACAACACTTT-GTTCTCGAAGGTTATACATGCCGGAGAAA-TGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900988       <-- CACGAACAACACTTT-GTTCTCGAAGGTTATCCATGCCGGAGAAA-TGTT
FD959514       <-- CACGAACAACACTTC-GTTCTCGAAGGTTATACATGCCGGAGAAA-TGTT
FD544775       <-- CACGAACAACACTTT-GTTCTCGAAGGTTATACATGCCGGAGAAA-TGTT
EW737764       <-- CACGAACAACACTTT-GTTCTCGAAGGTTATACATGCCGGAGAAAATGTT
EX897178       --> CACGAACAACACTTT-GTTCTCGAAGGTTATCCATGCCGGAGAAA-TGTT
FD963117       --> CACGAACAACACTTC-GTTCTCGAAGGTTATACATGCCGGAGAAA-TGTT
FD964022       --> CACGAACAACACTTT-GTTCTCGAAGGTTATACATGCCGGAGAAA-TGTT
FD940299       --> CACGAACAACACTTT-GTTCTCGAAGGTTATACATGCCGGAGAAA-TGTT
EW732925       --> CACGAACAACACTTTTGTTCTCGAAGGTTATACATGCCGGAGAAA-TGTT

               450    -    500
UN20844        --> TGTT-GTCCCTAGAGGG-TTGGTTCATTT-CCAGTGGAACGTTGGTAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900988       <-- TGTT-GTCCCTAGAGGG-TTGGTTCATTT-CCAGTGGAACGTTGGTAAAG
FD959514       <-- TGTT-GTCCCTAGAGGG-TTGGTTCATTT-CCAGTGGAACGTTGGTAAAG
FD544775       <-- TGTT-GTCCCTAGAGGG-TTGGTTCATTT-CCAGTGGAACGTTGGTAAAG
EW737764       <-- TGTT-GTCCCTAGAGGG-TTGGTTCATTT-CCAGTGGAACGTTG......
EX897178       --> TGTT-GTCCCTAGAGGG-TTGGTTCATTT-CCAGTGGAACGTTGGTAAAG
FD963117       --> TGTT-GTCCCTAGAGGG-TTGGTTCATTT-CCAGTGGAACGTTGGTAAAG
FD964022       --> TGTT-GTCCCTAGAGGG-TTGGTTCATTT-CCAGTGGAACGTTGGTAAAG
FD940299       --> TGTT-GTCCCTAGAGGG-TTGGTTCATTT-CCAGTGGAACGTTGGTAAAG
EW732925       --> TGTTTGTCCCTAGAGGGGTTGGTTCATTTTCCAGTGGAACGTTGGTAAAG

               500    -    550
UN20844        --> GGAAAGCACGTTTGGTAACTTCCTTTAACAGCCAGCTTCCAGGATCGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900988       <-- GGAAAGCACGTTTGGTAACTTCCTTTAACAGCCAGCTTCCAGGATCGGCT
FD959514       <-- GGAAAGCACGTTTGGTAACTTCCTTTAACAGCCAGCTTCCAGGATCGGCC
FD544775       <-- GGAAAGCACGTTTGGTGACTTCCTTTAACAGCCAGCTTCCAGGATCGGCT
EW737764       <-- ..................................................
EX897178       --> GGAAAGCACGTTTGGTAACTTCCTTTAACAGCCAGCTTCCAGGATCGGCT
FD963117       --> GGAAAGCACGTTTGGTAACTTCCTTTAACAGCCAGCTTCCAGGATCGGCC
FD964022       --> GGAAAGCATGTTTGGTAACTTCCTTTAACAGCCAGCTTCCAGGATCGGCT
FD940299       --> GGAAAGCACGTTTGGTAACTTCCTTTAACAGCCAGCTTCCAGGATCGGCT
EW732925       --> GGAAAGCACGTTTGGTAACTTCCTTTAACAGCCAGCTTCCAGGATCGGCT

               550    -    600
UN20844        --> GTTCTGCCTAGTACTCTGTTTGGTTCTATGCCTGAGATTCCAAACGCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900988       <-- GTTCTGCCTACTACTCTGTTTGGTTCTATGCCTGAGATTCCAAACGCGGT
FD959514       <-- GTTCTGCCTAGTACTCTGTTTGGTTCTATGCCTGAGATTCCAAACGCGGT
FD544775       <-- GTTCTGCCTAGTACTCTGTTTGGTTCTATGCCTGAGATTCCAAACGCGGT
EW737764       <-- ..................................................
EX897178       --> GTTCTGCCTACTACTCTGTTTGGTTCTATGCCTGAGATTCCAAACGCGGT
FD963117       --> GTTCTGCCTAGTACTCTGTTTGGTTCTATGCCTGAGATTCCAAACGCGGT
FD964022       --> GTTCTGCCTAGTACTCTGTTTGGTTCTATGCCTGAGATTCCAAACGCGGT
FD940299       --> GTTCTGCCTAGTACTCTGTTTGGTTCTATGCCTGAGATTCCAAACGCGGT
EW732925       --> GTTCTGCCTAGTACTCTGTTTGGTTCTATGCCTGAGATTCCAAACGCGGT

               600    -    650
UN20844        --> TTTGACCAAAACGTTTAGGACTGATGATGTAACTGTGAACAATCTCAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900988       <-- TTTGACCAAAACGTTTAGGACTGATGATGCAACTGTGAACAATCTCAAGT  Raphanus sativus cv Early Scarlet Globe
FD959514       <-- TTTGACCAAAACGTTTAGGACTGATGATGTAACTGTGAACAATCTCAAGT  Raphanus raphanistrum subsp. maritimus
FD544775       <-- TTTGACCAAAACGTTTAGGACTGATGATGCAACTGTGAACAATCTCAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737764       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX897178       --> TTTGACCAAAACGTTTAG-ACTGATGATGCAACTGTGAACAATCTCAAGT  Raphanus sativus cv Early Scarlet Globe
FD963117       --> TTTGACCAAAACGTTTAG-ACTGATGATGTAACTGTGAACAATCTCAAGT  Raphanus raphanistrum subsp. maritimus
FD964022       --> TTTGACCAAAACGTTTAGGACTGATGATGTAACTGTGAACAATCTCAAGT  Raphanus raphanistrum subsp. maritimus
FD940299       --> TTTGACCAAAACGTTTAGGACTGATGATGTAACTGTGAACAATCTCAAGT  Raphanus sativus var. oleiformis
EW732925       --> TTTGACCAAAACGTTTAGGACTGATGATGTAACTGTGAACAATCTCAAGT  Raphanus sativus cv Rat-Tail Radish #3870

               650    -    700
UN20844        --> CCAAGTTTGCTGTTTGAATTTTTATTT-ATTTTATGTTTTCTACTAATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900988       <-- CCAAGTTTGCTGTTTGAACTTTT-TTT-ATTTTATGTTTTCTACTAATAT
FD959514       <-- CCAAGTTTGCTGTTTGAATTTTTATTT-ATTTTATGTTTTCTACTAATAT
FD544775       <-- CCAAGTTTGCTGTTTGAATTTTTATTTTATTGTATGTTTTCTGCTAATAT
EW737764       <-- ..................................................
EX897178       --> CCAAGTTTGCTGTTTGAACTTTT-TTT-ATTTTATGTTTTCTACTAATAT
FD963117       --> CCAAGTTTGCTGTTTGAATTTTTATTT-ATTTTATGTTTTCTACTAATAT
FD964022       --> CCAAGTTTGCTGTTTGAATTTTTATTT-ATTTTATGTTTTCTACTAATAT
FD940299       --> CCAAGTTTGCTGTTTGAATTTTTATTT-ATTTTATGTTTTCTACTAATAT
EW732925       --> CCAAGTTTGCTGTTTGAATTTTTATTT-ATTTTATGTTTTCTACTAATAT

               700    -    750
UN20844        --> GATATTTCTCAATTCTATTTTATTGCAGTAATGGTGTACATTTATGTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900988       <-- GATATTTCTCAATTCTATTTTATTGCAGTAATGGTGTACATTTATGTGTA
FD959514       <-- GATATTTCTCAATTCTATTTTATTGCAGTAATGGTGTACATTTATGTGTA
FD544775       <-- GATATTTCTCAATTCTATTTTATTGCAGTAATGGTGTACATTTATGTGTA
EW737764       <-- ..................................................
EX897178       --> GATATTTCTCAATTCTATT...............................
FD963117       --> GATATTTCTCAATTCTATTTatg...........................
FD964022       --> GATATTTCTCAATTCTATTTTATTGCAGTAATGATGTACATTTA......
FD940299       --> GATATTTCTCAATTCTATTTTATTGCAGTAATGGTGTACATTTATGTGTA
EW732925       --> GATATTTCTCAATTCTATTTTATTGCAGTAATGGTGTACATTTATGTG..

               750    -    800
UN20844        --> ATAATAGTTATGAAAAATATATCTTGACCAAAAGTTATAAAGCACAATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX900988       <-- ATAATAGTTAAGAAAAATATATCTTGACCAAAAGTTCTAAgc........
FD959514       <-- ATAATAGTTATGAAAAATATATCATGACCAAAAGTTATAAAGCACAATTA
FD544775       <-- ATAATAGTTAAGAAAAATATATCTTGACC.....................
EW737764       <-- ..................................................
EX897178       --> ..................................................
FD963117       --> ..................................................
FD964022       --> ..................................................
FD940299       --> ATAATAGTTATGAAAAA.................................
EW732925       --> ..................................................

               800    -    850
UN20844        --> ACATT
                   ~~~~~
EX900988       <-- .....
FD959514       <-- ACATT
FD544775       <-- .....
EW737764       <-- .....
EX897178       --> .....
FD963117       --> .....
FD964022       --> .....
FD940299       --> .....
EW732925       --> .....