RadishBase

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Alignment for radish unigene UN20892

               1      -     51
UN20892        --> CCAACTTTCCACACAGAATAATCATTAATTAATATAAATGACCTTAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- ..................................................
EX762232       <-- ..................................................
EY939923       <-- ..................................................
EY901236       <-- ..................................................
EY924438       <-- ..................................................
EX765717       <-- ..................................................
EX765666       <-- ..................................................
EW732536       <-- ..................................................
EV566881       <-- ..................................................
EV571910       --> CCAACTTTCCACACAGAATAATCATTAATTAATATAAATGACCTTAACAA
EY896594       --> .......................................GACCTTAACAA
EW737012       --> ..................................................
EX766543       --> ..................................................
EY935769       --> ..................................................
FD959790       --> ..................................................

               51     -    101
UN20892        --> ACTAAATCCATAGGCTTATTATTATTTTTTTAAAATAAAAGAGGTCAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- ...AAATCCATAGGCTTATTATTATTTTTTAAAAATAAAAGAGGTCAAGT
EX762232       <-- ............................tttttaactAAAGAGGTCAAGT
EY939923       <-- ..................................................
EY901236       <-- ..................................................
EY924438       <-- ..................................................
EX765717       <-- ..................................................
EX765666       <-- ..................................................
EW732536       <-- ..................................................
EV566881       <-- ..................................................
EV571910       --> ACTAAATCCATAGGCTTATTATTATTTTTTTTAAATAAAAGAGGTCAAGT
EY896594       --> ACTAAATCCATAGGCTTATTATTATTTTTTTAAACTAAAAGAGGTCAAGT
EW737012       --> ........CATAGGCTTATTACT-TTTTTAAAAAATAAAAGAGGTCAAGT
EX766543       --> ..................................................
EY935769       --> ..................................................
FD959790       --> ..................................................

               101    -    151
UN20892        --> GAGATGACAAATGCAACCAGTCGCCAAAAGCTACGGTTTCCTTTCTTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- GAGATGACAAATGCAACCAGTCACCAAAAGCTACGGTTTCCTTTCTTAAA  Raphanus raphanistrum subsp. landra
EX762232       <-- GAGATGACAAATGCAACCAGTCGCCAAAAGCTACGGTT-CCTTTCTTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939923       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY901236       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY924438       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX765717       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765666       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW732536       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV566881       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV571910       --> GAGATGACAAATGCAACCAGTCACCAAAAGCTACGGTTTCCTTTCTTACA  Raphanus raphanistrum subsp. landra
EY896594       --> GAGATGACAAATGCAACCAGTCGCCAAAAGCTACGGTTTCCTTTCTTACA  Raphanus raphanistrum subsp. maritimus
EW737012       --> GAGATGACAAAGGCAACCGGTCACCAAAAGCTACGGTTTACTTTCTTACA  Raphanus sativus cv Rat-Tail Radish #3870
EX766543       --> ...............ACCAGTCGCCAAAAGCTACGGGTTCCTTTCTTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935769       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD959790       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               151    -    201
UN20892        --> AGTCTTTCCGTCTCGGTTACAACATTCAATTCATAGATTACTAGTATCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- AGTCTTTCCGTCTCGGTTACAACATTCAATTCATAGATTACTAGTATCCG
EX762232       <-- AGTCTTTC-GTCTCGGTTACAACATTCAATTCATAGATTACTAGTATCCG
EY939923       <-- ..................................................
EY901236       <-- ..................................................
EY924438       <-- ..................................................
EX765717       <-- ..................................................
EX765666       <-- ..................................................
EW732536       <-- ..................................................
EV566881       <-- ..................................................
EV571910       --> AGTCTTTCCGTCTCGGTTACAACATTCAATTCATAGATTACTAGTATCCG
EY896594       --> AGTCTTTCCGTCTCGGTTACAACATTCAATTCATAAATTACTAGTATCCG
EW737012       --> AGTCTTTCCGTCTCGGTTACAAAATTCAATTCATAGATTACTAGTATCCA
EX766543       --> AGTCTTTCCGTCTCGGTTACAACATTCAATTCATAGATTACTAGTATCCG
EY935769       --> ..................................................
FD959790       --> ..................................................

               201    -    251
UN20892        --> TTGCTCAATCCTTTGGTCTCTAGAGATGGCAAGACCAGAGGTTTGAAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- TTGCTCGATCCTTTGGTCTCTAGAGATGGCAAGACCAGAGGTTTGAAACC
EX762232       <-- TTGCTCAATCCTTTGGTCTCTAGAGATGGCAAGACCAGAGGTTCGAAACC
EY939923       <-- ........................GATGGCAAGACCAGAGGTTTGAAACC
EY901236       <-- ..................................................
EY924438       <-- ..................................................
EX765717       <-- ..................................................
EX765666       <-- ..................................................
EW732536       <-- ..................................................
EV566881       <-- ..................................................
EV571910       --> TTGCTCAATCCTTTGGTCTCTAGAGATGGCAAGACCAGAGGTTTGAAGCC
EY896594       --> TTGCTCAATCCTTTGGTCT...............................
EW737012       --> CTGCTCAATCCTTTGGTCTCTAGAGATGGCAGGACCGGAGGTTTGAAACC
EX766543       --> TTGCTCAATCCTTTGGTCTCTAGAGATGGCAAGACCAGAGGTTCGAAACC
EY935769       --> ...........................GGCAAGACCAGAGGTTTGAAACC
FD959790       --> ..................................................

               251    -    301
UN20892        --> ATTTCGAAGAGCAGCCTCCCACACTCTGGGAGGGTTAACAACTGGACCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- ATTTCGAAGAGCAGCCTCCCACACTCTGGGAGGGTTAACAACTGGACCAT
EX762232       <-- ATTTCGAAGAGCAGCCTCCCACACTCTGGGAGGGTTAACAACTGGACCAT
EY939923       <-- ATTTGGAAGAGCAGCCTCCCACACTCTGGGAGGGTTAACAACTGGACCAT
EY901236       <-- .............................................ACCAT
EY924438       <-- ..................................................
EX765717       <-- ..................................................
EX765666       <-- ..................................................
EW732536       <-- ..................................................
EV566881       <-- ..................................................
EV571910       --> ATTTCGAAAAGCAGCCTCCCACACTCTGGGAGGGTTAACAACTGGACCAT
EY896594       --> ..................................................
EW737012       --> ATTTCGAAGAGCAGCCTCCCACACTCTGGGAGGGTTAACAACTGGACCGT
EX766543       --> ATTTCGAAGAGCAGCCTCCCACACTCTGGGAGGGTTAACAACTGGACCAT
EY935769       --> ATTTCGAAAAGCAGCCTCCCACACTCTGGGAGGGTTAACAACTGGACCAT
FD959790       --> ...............CTCCCACACTCTGGGGGGGTTAACAACTGGACCAT

               301    -    351
UN20892        --> CAAGACCGCACTCGTGTTCCTCCCACCCTTCAAGCGCATGTACTATCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- CAAGACCGCACTCGTGTTCCTCCCACCCTTCAAGCGCATGTACTATCCCA
EX762232       <-- CAAGACCGCACTCGTGTTCCTCCCACCCTTCAAGCGCATGTACTATCCCA
EY939923       <-- CAAGACCGCACTCGTGTTCCTCCCACCCTTCAAGCGCATGTACTATCCCA
EY901236       <-- CAAGACCGCACTCGTGT-CCTCCCACC-TTCAAGCGCATGTACTATCCCA
EY924438       <-- ............................................ATCCCA
EX765717       <-- ..........................................tgtactgt
EX765666       <-- ..................................................
EW732536       <-- ..................................................
EV566881       <-- ..................................................
EV571910       --> CAAGACCGCACTCGTGTTCCTCCCACCCTTCAAGCGCATGTACTATCCCA
EY896594       --> ..................................................
EW737012       --> CAAGACCGCACTCGTGTTCCTCCCACCCTTCAAGCGCATGCACTATCCCA
EX766543       --> CAAGACCGCACTCGTGTTCCTCCCACCCTTCAAGCGCATGTACTATCCCA
EY935769       --> CAAGACCGCACTCGTGTTCCTCCCACCCTTCAAGCGCATGTACTATCCCA
FD959790       --> CAAGACCGCACTCGTGTTCCTCCCACCCTTCAAGCGCATGTACTATCCCA

               351    -    401
UN20892        --> CCAACTCTCCATGCGCTCATCACTCTCCTCCCCAGCCAGTTCTCACAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- CCAACTCTCCATGCGCTCATCACTCTCCTCCCCAGCCAGTTCTCACAAGA
EX762232       <-- CCAACTCTCCATGCGCTCATCACTCTCCTCCCCAGCCAGTTCTCACAAGA
EY939923       <-- CCAACTCTCCATGCGCTCATCACTCTCCTCCCCAGCC.............
EY901236       <-- CCAACTCTCCATGCGCTCATCAATCTCCTCCCCAGCCAGTTCTCACAAGA
EY924438       <-- CCAACTCTCCATGCGCTCATCACTCTCCTCCCCAGCCAGTTCTCACAAGA
EX765717       <-- cccACTCTCCATGCGCTCATCACTCTCCTCCCCAGCCAGT-CTCACAAGA
EX765666       <-- ..................................................
EW732536       <-- ..................................................
EV566881       <-- ..................................................
EV571910       --> CCAACTCTCCATGCGCTCATCACTCTCCTCCCCAGCCAGTTCTCACAAGA
EY896594       --> ..................................................
EW737012       --> CCAACTCTCCATGCGCTCATCACTCTCCTCCCCAACCAGTTCTCACAAGA
EX766543       --> CCAACTCTCCATGCGCTCATCACTCTCCTCCCCAGCCAGTTCTCACAAGA
EY935769       --> CCAACTCTCCATGCGCTCATCACTCTCCTCCCCAGCC.............
FD959790       --> CCAACTCTCCATGCGCTCATCACTCTCCTCCCCAGCCAGTTCTCACAAGA

               401    -    451
UN20892        --> ATCGATGTTTTGAGCAGAGTCAGGGATGATCATAGCCGGAGTGGTATGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- ATCGATGTTTTGAGCAGAGTCAGGGATGATCATAGCCGGAGTGGTATGGT
EX762232       <-- ATCGATGTTTTGAGCAGAGTCAGGGATGATCATAGCCGGAGTGGTATGGT
EY939923       <-- ..................................................
EY901236       <-- ATCGATGTTTTGAGCAGAGTCAGGGATGATCATAGCCGGAGTGGTATGGT
EY924438       <-- ATCGATGTTTTGAGCAGAGTCAGGGATGATCATAGCCGGAGTGGTATGGT
EX765717       <-- -TCGATGTTT-GAGCAGAGTCAGGGATGATCATAGCGGGAGTG-TAT-GT
EX765666       <-- ..................................................
EW732536       <-- ..................................................
EV566881       <-- ..................................................
EV571910       --> ATCGATGTTTTGAGCAGAGTCAGGGATGATCATAGCCGGAGTGGTATGGT
EY896594       --> ..................................................
EW737012       --> ATCGATGTTTTGAGCAGAGTCAGGGATGATCATAGCCGGAGTGGTATGGT
EX766543       --> ATCGATGTTTTGAGCAGAGTCAGGGATGATCATAGCCGGAGTGGTATGGT
EY935769       --> ..................................................
FD959790       --> ATCGATGTTTTGAGCAGAGTCAGGGATGATCATAGCCGGAGTGGTATGGT

               451    -    501
UN20892        --> AAAAGCAGTCCTTTCGAAGTTGAGTAGGAGGAAACTGTGAGAAAGGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- AAAAGCAGTCATTTCGAAGTTGAGTAGGAGGAAACTGTGAGAAAGGAAGA
EX762232       <-- AAAAGCAGTCCTTTCGAAGTTGAGTAGGAGGAAACTGTGAGAAAGGAAGA
EY939923       <-- ..................................................
EY901236       <-- AAAAGCAGTCCTTTCGAAGTTGAGTAGGAGGAAACTGTGAGAAAGGAAGA
EY924438       <-- AAAAGCAGTCATTTCGAAGTTGAGTAGGAGGAAACTGTGAGAAAGGAAGA
EX765717       <-- AAAAGCAGTCCTTTCGAAGTTGAGTAGGAGGAAACTGTGAGAAAGGAAGA
EX765666       <-- ..................................................
EW732536       <-- ..................................................
EV566881       <-- ..................................................
EV571910       --> AAAAGCAGTCTTTTCGAAGTTGAGTAGGAGGAAACTGTGAGAAAGGAAGA
EY896594       --> ..................................................
EW737012       --> AAAAGCAGTCCTTTCGAAGTTGAGTAGGAGGAAACTGTGAGAAAGGAAGA
EX766543       --> AAAAGCAGTCCTTTCCAAGTTGAGTAGGAGGAAACTGTGAGAAAGGAAAA
EY935769       --> ..................................................
FD959790       --> AAAAGCAGTCCTTTCGAAGTTGAATAGGAGGAAACTGTGAGAAAGGAAAA

               501    -    551
UN20892        --> AAACGAGTTCCTTTTGTTGCCATCTTCTGCTCTTCTTTGCTTAGCCCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- AAACGAGTTCCTTTTGTTGCCATCTTCTGCTCTTCTTTGCTTAGCCCATC
EX762232       <-- AAACGAGTTCCTTTTGTTGCCATCTTCTGCTCTTCTTTGCTTAGCCCATC
EY939923       <-- ..................................................
EY901236       <-- AAACGAGTTCCTTTTGTTGCCATCTTCTGCTCTTCTTTGCTTAGCCCATC
EY924438       <-- AAACGAGTTCCTTTTGCTGCCATCTTCTGCTCTTCTTTGCTTAGCCCATC
EX765717       <-- AAACGAGT-CCTTTTGTTGCCATCTTCTGCTCTTCTTTGCTTAGCCCATC
EX765666       <-- ..............TGTTGCCATCT-CTGCTCTTCTTTGCTTAGCCCATC
EW732536       <-- ...........................TGCTCTTCTTTGCTTAGCCCATC
EV566881       <-- ..................................................
EV571910       --> AAACGAGTTCCTTTTGTTGCCATCTTCTGCTCTTCTTTGCTTAGCCCATC
EY896594       --> ..................................................
EW737012       --> AAACGAGTTCCCTTTGTTGCCATCTTCTGCTCTTCTTTGCTTAGCCCATC
EX766543       --> AAACGAGTTCCTTTTGTTGCCATCTTCTGCTCTTCTTTGCTTAGCCCATC
EY935769       --> ..................................................
FD959790       --> AAACGAGTTCCTTTTGTTGCCATCTTCTGCTCTTCTTTGCTTAACCCATC

               551    -    601
UN20892        --> TCCCACCAACCAAATCATTGGGGAGTAATCGGTTGTGAGCACCAGATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- TCCCACCAACCAAATCATTGGGGAGTAATCGGTTGTGAGCACCAGATTTT
EX762232       <-- TCCCACCAACCAAATCATTGGGGAGTAATCGGTTGTGAGCACCAGATTTT
EY939923       <-- ..................................................
EY901236       <-- TCCCACCAACCAAATCATTGGGGAGTAATCGGTTGTGAGCACCAGATTTT
EY924438       <-- TCCCACCAACCAAATCATTGGGGAGTAATCGGTTGTGAGCACCAGATTTT
EX765717       <-- TCCCACCAACCAAATCATTGGGGAGTAATCGGTTGTGAGCACCAGATTTT
EX765666       <-- TCCCACCAACCAAATCATTGGGGAGTAATCGGTTGTGAGCACCAGATTTT
EW732536       <-- TCCCACCAACCAAATCATTGGGGAGTAATCGGTTGTGAGCACCAGATTTT
EV566881       <-- ..................................................
EV571910       --> TCCCACCAACCAAATCATTGGGGAGTAATCGGTTGTGAGCACCAGATTTT
EY896594       --> ..................................................
EW737012       --> TCCCACCAACCAAATCATTGGGGAGTAATCGGTTGTGAGCACCAGATTTT
EX766543       --> TCCCACCAACCAAATCATTGGGGAGTAATCGGTTGTGAGCACCAGATTTT
EY935769       --> ..................................................
FD959790       --> TCCCACCAACCAAATCATTGGGGAGTAATCGGTTGTGAGCACC.......

               601    -    651
UN20892        --> CTTTACAATGCCCGCCAAGGTATCCGGCTAGCATGCAATGCTCTTCCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- CTTTACAATGCCCGCCAAGATATCCGGCTAGCATGCAATGCTCTTCCTCA
EX762232       <-- CTTTACAATGCCCGCCAAGGTATCCGGCTAGCATGCAATGCTCTTCCTCA
EY939923       <-- ..................................................
EY901236       <-- CTTTACAATGCCCGCCAAGGTATCCGGCTAGCATGCAATGCTCTTCCTCA
EY924438       <-- CTTTACAATGCCCGCCA-GATATCCGGCTAGCATGCAATGCTCTTCCTCA
EX765717       <-- CTTTACAATGCCCGCCAAGGTATCCGGCTAGCATGCAATGCTCTTCCTCA
EX765666       <-- CTTTACAATGCCCGCCAAGGTATCCGGCTAGCATGCAATGCTCTTCCTAA
EW732536       <-- CTTTACAATGCCCGCCAAGGTATCCGGCTAGCATGCAATGCTCTTCCTCA
EV566881       <-- ..................................................
EV571910       --> CTTTACAATGCCCGCCAAGGTATCCGGCTAGCATGCAATGCTCTTCCTCA
EY896594       --> ..................................................
EW737012       --> CTTTACAATGCCCGCCAAGGTATCCGGCTAGCATGCAATGCTCTTCCTCA
EX766543       --> CTTTACAATGCCCGCCAAGGTATCCGGCTAGCATGCAATG..........
EY935769       --> ..................................................
FD959790       --> ..................................................

               651    -    701
UN20892        --> CATAACATCATCACCTTGATGCCATTTTGGCAAAGAGAAGTGACAATGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- CATAACATCATCACCTTGATGCCATTTTGGCAAAGAGAAGTGACAATGc.
EX762232       <-- CATAACATCATCACCTTGATGCCATTTTGGCAAAGAGAAGTGACAATGGC
EY939923       <-- ..................................................
EY901236       <-- CATAACATCATCACCTTGATGCCATTTTGGCAAAGAGAAGTGACAATGGC
EY924438       <-- CATAACATCATCACCTTGATGCCATTTTGGCAAAGAGAAGTGACAATGGC
EX765717       <-- CACAACATCATCACCTTGATGCCATTTTGGCAAAGAGAAGTGACAATGGC
EX765666       <-- CATAACATCATCACCTTGATGCCATTTTGGCAAAGAGAAGTGACAATGGC
EW732536       <-- CATAACATCATCACCTTGATGCCATTTTGGCAAAGAGAAGTGACAATGGC
EV566881       <-- ..................ATGCCATTT-GGCAAAGAGAAGTGACAATGGC
EV571910       --> CATAACATCATCACCTTGATGCCATTTTGGCAAAGAGAAGTGACAATGGC
EY896594       --> ..................................................
EW737012       --> CATAACATCATCACCTTGATGCCATTTTGGCAAAGAGAAGTGACAATGGC
EX766543       --> ..................................................
EY935769       --> ..................................................
FD959790       --> ..................................................

               701    -    751
UN20892        --> ACGAGCAACTTTTGTGATTTTTCCTCGAAAGAGAACTTCTCTAGTGCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX762232       <-- ACGAGCAACTCTTGTGATTTTTCCTCGAAAGAGAACTTCTCTAGTGCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939923       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY901236       <-- ACGAGCAACTTCTGTGATTTTTCCTCGAAAGAGAACTTCTCTAGTGCCAA  Raphanus raphanistrum subsp. maritimus
EY924438       <-- ACGAGCAACTTTTGTGATTTTTCCTCGAAAGAGAACTTCTCTAGTGCCAA  Raphanus raphanistrum subsp. landra
EX765717       <-- ACGAGCAACTTTTGTGATTTTTCCTCGAAAGAGAACTTCTCTAGTGCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765666       <-- ACGAGCAACTTTTGTGATTTTTCCTCGAAAGAGAACTTCTCTAGTGCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW732536       <-- ACGAGCAACTTTTGTGATTTTTCCTCGAAAGAGAACTTCTCTCGTGCCAA  Raphanus sativus cv Rat-Tail Radish #3870
EV566881       <-- ACGAGCAACTTTTGTGATTTTTCCTCGAAAGAGAACTTCTCTCGTGCCAA  Raphanus raphanistrum subsp. landra
EV571910       --> ACGAGCAACTTTTGTGATTTTTCCTCGAAAGAGAACTTCTCTCGTGCCAA  Raphanus raphanistrum subsp. landra
EY896594       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW737012       --> ACGAGCAACTTTTGTGATTTTTCCTCGAAAGAGAACTTCTCTCGTGCCAA  Raphanus sativus cv Rat-Tail Radish #3870
EX766543       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935769       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD959790       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               751    -    801
UN20892        --> CGGGAATACTATGGACCACCACCTCAGCTGCAAGACTGCTACCGTCTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX762232       <-- TGGGAATACTATGGACCACCACCTCAGCTGCAAGACTGCTACCGTCTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY939923       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY901236       <-- TGGGAATACTATGGACCACCACCTCAGCTGCAAGACTGCTACCGTCTACT  Raphanus raphanistrum subsp. maritimus
EY924438       <-- CGGGAATACTATGGACCACCACCTCAGCTGCAAGACTGCTACCGTCTACT  Raphanus raphanistrum subsp. landra
EX765717       <-- TGGGAATACTATGGACCACCACCTCAGCTGCAAGACTGCTACCGTCTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765666       <-- TGGGAATACTATGGACCACCACCTCAGCTGCAAGACTGCTACCGTCTACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW732536       <-- CGGGAATACTATGGACCACCACCTCAGCTGCGAGACTGCTACCGTCTACT  Raphanus sativus cv Rat-Tail Radish #3870
EV566881       <-- CGGGAATACTATGGACCACCACCTCAGCTGCAAGACTGCTACCGTCTACT  Raphanus raphanistrum subsp. landra
EV571910       --> CGGGAATACTATGGACCACCACCTCAGCTGCAAGACTGCTACCGTCTACT  Raphanus raphanistrum subsp. landra
EY896594       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW737012       --> CGGGAATACTATGGACCACCACCTCAGCTGCGAGACTGCTACCGTCTACT  Raphanus sativus cv Rat-Tail Radish #3870
EX766543       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY935769       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD959790       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               801    -    851
UN20892        --> ATCCTTATCTTTAGCTTTGGGTGCTTCCTTAAATACATTTCTCCGTAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- ..................................................
EX762232       <-- ATCCTTATCTTTAGCTTTGGGTGCTTCCTTAAATACATTTCTCC......
EY939923       <-- ..................................................
EY901236       <-- ATCCTTATCTTTAGCTTTGGGTGCTTCCTTAAATACATTTCTCCGTAGCC
EY924438       <-- ATCCTTATCTTTAGCTTTGGGTGCTTCCTTAAATACATTTCTCCGTAGCC
EX765717       <-- ATCCTTATCTTTAGCTTTGGGTGCTTCCTTAAATACATTTCTCCGTAGCC
EX765666       <-- ATCCTTATCTTTAGCTTTGAGTGCTTCCTTAAATACATTTCTCCGTAGCC
EW732536       <-- ATCCTTATCTTTAGCTTTGGGTGCTTCCTTAAATACATTTCTCCGTAACC
EV566881       <-- ATCTTTATCTTTAGCTTTGGGTGCTTCCTTAAATACATTTCTCCGTAGCC
EV571910       --> ATCCTTATCTTTAGCTTTGGGTGCTTCCTTAAATACATTTCTCCGTAGCC
EY896594       --> ..................................................
EW737012       --> ATCCTTATCTTTAGCTTTGGGTGCTTCCTTAAATACATTTCTCCGTAACC
EX766543       --> ..................................................
EY935769       --> ..................................................
FD959790       --> ..................................................

               851    -    901
UN20892        --> ATTTAATTCTTCTCCCTGGTTCAATAGCCCCAAACTCATTACTTTCACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- ..................................................
EX762232       <-- ..................................................
EY939923       <-- ..................................................
EY901236       <-- ATTTAATTCTTCTCCCTGGTTCAATAGCCCCAAACTCATTACTTTCACAC
EY924438       <-- ATTTAATTCTTCTCCCTGGTTCAATAGCCCCAAACCCATTACTTTCACAC
EX765717       <-- ATTTAATTCTTCTCCCTGGTTCAATAGCCCCAAACTCATTACTTTCACAC
EX765666       <-- ATTTAATTCTTCTCCCTGGTTCAATAGCCCCAAACTCATTACTTTCACAC
EW732536       <-- ATTTAATTCTTCTCCCTGGTTCAATAGCCCCAAACTCATTACTTTCACAC
EV566881       <-- ATTTAATTCTTCTCCCTGGTTCAATAGCCCCAAACTCATTACTTTCACAC
EV571910       --> ATTTAATTCTTCTCCCTGGTTCAATAGCCCCAAACTCATTACTTTCACAC
EY896594       --> ..................................................
EW737012       --> ATTTAATTCTTCTCCCTGGTTCAATAGCCCCAAACTCATTACTTTCACAC
EX766543       --> ..................................................
EY935769       --> ..................................................
FD959790       --> ..................................................

               901    -    951
UN20892        --> CCCTCTTGTCCGCTTCAATGATAGCCGTCTCTATCATTTTGTTGATAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- ..................................................
EX762232       <-- ..................................................
EY939923       <-- ..................................................
EY901236       <-- TCCTCTTGTCCGCTTCAATGATAGCCGTCTCTATCATTTTGTTGATAGAT
EY924438       <-- CCCc..............................................
EX765717       <-- CCCTCTTGTCCGCTTCAATGATAGCCGTCTCTATCATTTTGTTGATAGAT
EX765666       <-- CCCTCTTGTCAGCTTCAATGATAGCCGTCTCTATCATTTTGTTGATAGAT
EW732536       <-- CCCTCTTGTCCGCTTCAATGATAGCCGTCTCTATCATTTTGTTGATAGAT
EV566881       <-- CCCTCTTGTCCGCTTCAATGATAGCCGTCTCTATCATTTTGTTGATAGAT
EV571910       --> CCCTCTTGTCCGCTTCAATG..............................
EY896594       --> ..................................................
EW737012       --> CCCTCTTGTCCGCTTCAATGATAGCCGTCTCTATCATTTTGTTGATAGAT
EX766543       --> ..................................................
EY935769       --> ..................................................
FD959790       --> ..................................................

               951    -   1001
UN20892        --> TCTTTACACTGCTGCGATATGTAATGAGAGGAGAACTTGGGAAGGAGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- ..................................................
EX762232       <-- ..................................................
EY939923       <-- ..................................................
EY901236       <-- TCTTTACACTGCTGCGATATGTAATGAGAGGAGAACTTGGGAAGGAAGTG
EY924438       <-- ..................................................
EX765717       <-- TCTTTACACTGCTGCGATATGTAATGAGAGGAGAACTTGGGAAGGAGGTG
EX765666       <-- TCTTTACACTGCTGCGATATGTAATGAGAGGAGAACTTGGGAAGGAGGTG
EW732536       <-- TCTTTACACTGCTGCGATATGTAATGAGAGGAGAACTTGGGAAGGAGGTG
EV566881       <-- TATTTACACTGCTGCGATATGTAATGAGAGGAGAACTTGGGAAGGAGGTG
EV571910       --> ..................................................
EY896594       --> ..................................................
EW737012       --> TCTTTACACTGCTGCGATATGTAAT.........................
EX766543       --> ..................................................
EY935769       --> ..................................................
FD959790       --> ..................................................

               1001   -   1051
UN20892        --> GGAGTGAATGGTGAGATCACGGAAGCGGTTTCTCTCAAAGACAAAGGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- ..................................................
EX762232       <-- ..................................................
EY939923       <-- ..................................................
EY901236       <-- GGAGTGAATGGTGAGATCACGGAAGCGGTTTCTCTCAAAGACAAAGGTTC
EY924438       <-- ..................................................
EX765717       <-- GGAGTGAATGGTGAGATCACGGAAGCGGTTTCTCTCAAAGACAAAGGTTC
EX765666       <-- GGAGTGAATGGTGAGATCACGGAAGCGGTTTCTCTCAAAGACAAAGGTTC
EW732536       <-- GGAGTGAATGGTGAGATCACGGAAGCGGTTTCTCTCAAAGACAAAGGTTC
EV566881       <-- GGAGTGAATGGTGAGATCACGGAAGCGGTTTCTCTCAAAGACAAAGGTTC
EV571910       --> ..................................................
EY896594       --> ..................................................
EW737012       --> ..................................................
EX766543       --> ..................................................
EY935769       --> ..................................................
FD959790       --> ..................................................

               1051   -   1101
UN20892        --> GGGAAGAGAATGAAGTTAGTATGAAAGAGATAACTAGAGTGAAGGGTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- ..................................................
EX762232       <-- ..................................................
EY939923       <-- ..................................................
EY901236       <-- GGGAAGAGAATc......................................
EY924438       <-- ..................................................
EX765717       <-- GGGAAGAGAATGAAGTTAGTATGAAAGAGATAACTAGAGCGAAGGGTCTC
EX765666       <-- GGGAAGAGAATGAAGTTAGTATGAAAGAGATAACTAGAGCGAAGGGTCTA
EW732536       <-- GGGAAGAGAATGAAGTTAGTATGAAAGAGATAACTAGAGTGAAGGGTCTC
EV566881       <-- GGGAAGAGAATGAAGTTAGTATGAAAGAGATAACTAGAGTGAAGGGTCTC
EV571910       --> ..................................................
EY896594       --> ..................................................
EW737012       --> ..................................................
EX766543       --> ..................................................
EY935769       --> ..................................................
FD959790       --> ..................................................

               1101   -   1151
UN20892        --> ATGAGTAATATGTAACACCGAGAAGATAGTGGGTGTGAGGAGAATGAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- ..................................................
EX762232       <-- ..................................................
EY939923       <-- ..................................................
EY901236       <-- ..................................................
EY924438       <-- ..................................................
EX765717       <-- ATGAGTAATATGTAACACCGAGAAGATAGTGGGTGTGAGGAGAATGAAGC
EX765666       <-- ATGAGTAATATGTAACACCGAGAAGATAGTGGGTGTGAGGAGAATGAAGC
EW732536       <-- ATGAGTAATATGTAACACCGAGAAGATAGTGGGTGTGAGGAGAATGAAGC
EV566881       <-- ATGAGTAATATGTAACACCGAGAAGATAGTGGGTGTGAGGAGAATGAAGC
EV571910       --> ..................................................
EY896594       --> ..................................................
EW737012       --> ..................................................
EX766543       --> ..................................................
EY935769       --> ..................................................
FD959790       --> ..................................................

               1151   -   1201
UN20892        --> AAAGCCAAGCCGGAGATGGTAAATAGAGTCGAGTGATGTTAGGTGGGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- ..................................................
EX762232       <-- ..................................................
EY939923       <-- ..................................................
EY901236       <-- ..................................................
EY924438       <-- ..................................................
EX765717       <-- AAAGCCAAGCCGGAGATGc...............................
EX765666       <-- AAAGCCAAGCCGGAGATGGTAAATAGAGTCGAGTGATGTTAGGTGGGTGA
EW732536       <-- AAAGCCAAGCCGGAGATGGTAAATAGAGTCGAGTGATGTTAGGTGGGTGA
EV566881       <-- AAAGCCAAGCCGGAGATGGTAAATAGAGTCGAGTGATGTTAGGTGGGTGA
EV571910       --> ..................................................
EY896594       --> ..................................................
EW737012       --> ..................................................
EX766543       --> ..................................................
EY935769       --> ..................................................
FD959790       --> ..................................................

               1201   -   1251
UN20892        --> GATGAATTGCGTCTGGCTTCTCTTCTTCTTTCTCCAATGATGATTCGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- ..................................................
EX762232       <-- ..................................................
EY939923       <-- ..................................................
EY901236       <-- ..................................................
EY924438       <-- ..................................................
EX765717       <-- ..................................................
EX765666       <-- GATGc.............................................
EW732536       <-- GATGAATTGCGTCTGGCTTCTCTTCTTCTTTCTCCAATGATGATTCGTAC
EV566881       <-- GATGAATTGCGTCTGGCTTCTCTTCTTCTTTCTCCAATGATGATTCGTAC
EV571910       --> ..................................................
EY896594       --> ..................................................
EW737012       --> ..................................................
EX766543       --> ..................................................
EY935769       --> ..................................................
FD959790       --> ..................................................

               1251   -   1301
UN20892        --> AATGAATCACTGCACTTGTCGTTGGACCCGTAGATGTAGTCGTACATTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- ..................................................
EX762232       <-- ..................................................
EY939923       <-- ..................................................
EY901236       <-- ..................................................
EY924438       <-- ..................................................
EX765717       <-- ..................................................
EX765666       <-- ..................................................
EW732536       <-- AATGAATCACTGCACTTGTCGTTGGTCCCcc...................
EV566881       <-- AATGAATCACTGCACTTGTCGTTGGACCCGTAGATGTAGTCGTACATTGG
EV571910       --> ..................................................
EY896594       --> ..................................................
EW737012       --> ..................................................
EX766543       --> ..................................................
EY935769       --> ..................................................
FD959790       --> ..................................................

               1301   -   1351
UN20892        --> CATGAATAGAGAGTAGTTTGTCCTGAATTGCGTGTGGTGGAGGGAGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- ..................................................
EX762232       <-- ..................................................
EY939923       <-- ..................................................
EY901236       <-- ..................................................
EY924438       <-- ..................................................
EX765717       <-- ..................................................
EX765666       <-- ..................................................
EW732536       <-- ..................................................
EV566881       <-- CATGAATAGAGAGTAGTTTGTCCTGAATTGCGTGTGGTGGAGGGAGTGAA
EV571910       --> ..................................................
EY896594       --> ..................................................
EW737012       --> ..................................................
EX766543       --> ..................................................
EY935769       --> ..................................................
FD959790       --> ..................................................

               1351   -   1401
UN20892        --> ATGAAGGAGTATAGCATAAGAACTTGAGAGGAGGGAAAAGAGAGAAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- ..................................................
EX762232       <-- ..................................................
EY939923       <-- ..................................................
EY901236       <-- ..................................................
EY924438       <-- ..................................................
EX765717       <-- ..................................................
EX765666       <-- ..................................................
EW732536       <-- ..................................................
EV566881       <-- ATGAAGGAGTATAGCATAAGAACTTGAGAGGAGGGAAAAGAGAGAAGAAA
EV571910       --> ..................................................
EY896594       --> ..................................................
EW737012       --> ..................................................
EX766543       --> ..................................................
EY935769       --> ..................................................
FD959790       --> ..................................................

               1401   -   1451
UN20892        --> GTTTTTGGAATGAACTCGAAGTTGCAGTGACCCAAGTTGTTCATGAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- ..................................................
EX762232       <-- ..................................................
EY939923       <-- ..................................................
EY901236       <-- ..................................................
EY924438       <-- ..................................................
EX765717       <-- ..................................................
EX765666       <-- ..................................................
EW732536       <-- ..................................................
EV566881       <-- GTTTTTGGAATGAACTCGAAGTTGCAGTGACCCAAGTTGTTCATGAAATC
EV571910       --> ..................................................
EY896594       --> ..................................................
EW737012       --> ..................................................
EX766543       --> ..................................................
EY935769       --> ..................................................
FD959790       --> ..................................................

               1451   -   1501
UN20892        --> TATGTAAGTTAAGTACAGGAAAAGCAGGCCACAGAGACCGTTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567775       <-- .............................................
EX762232       <-- .............................................
EY939923       <-- .............................................
EY901236       <-- .............................................
EY924438       <-- .............................................
EX765717       <-- .............................................
EX765666       <-- .............................................
EW732536       <-- .............................................
EV566881       <-- TATGTAAGTTAAGTACAGGAAAAGCAGGCCACAGAGACCGTTCCC
EV571910       --> .............................................
EY896594       --> .............................................
EW737012       --> .............................................
EX766543       --> .............................................
EY935769       --> .............................................
FD959790       --> .............................................