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Alignment for radish unigene UN20926

               1      -     51
UN20926        --> GGGTACTAATAATCCCAAAGAATCCACCAGACTACTCCGTCGCTTTAAA-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- ..................................................
FD539616       <-- ..................................................
FD547216       <-- ..................................................
FD530748       <-- ..................................................
FD567597       <-- ..................................................
FD566179       <-- ..................................................
FD564013       --> GGGTACTAATAATCCCAAAGAATCCACCAGACTACTCCGTCGCTTTAAAA
FY441937       --> ...........................CAGGCTACTCCGTCGCTTTAAA-
FY430456       --> .................................ACTCCGTCGCTTTAAA-
FD562226       --> ..................................................
FD534957       --> ..................................................
EX747126       --> ..................................................

               51     -    101
UN20926        --> CCCTAAAATCTCTCCGCCGTCCAATCCAATCCACCTCGCCTCACCATCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- ..................................................
FD539616       <-- ..................................................
FD547216       <-- ..................................................
FD530748       <-- ..................................................
FD567597       <-- ..................................................
FD566179       <-- ..................................................
FD564013       --> CCCTAAAATCTCTCCGCCGTCCAATCCAATCCACCTCGCCTCACCATCAG
FY441937       --> CCCTAAAATCTCTCCGCCGTCCAATCCAATCCACCTCGCCTCACCATCAG
FY430456       --> CCCTAAAATCTCTCCGCCGTCCAATCCAATCCACCTCGCCTCACCATCAG
FD562226       --> ..................................................
FD534957       --> ..................................................
EX747126       --> ..................................................

               101    -    151
UN20926        --> CTTTCCATCACAATCTCCCGAACCATGGCGACGCCGAATCTAGAGTGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- ..................................................
FD539616       <-- ..................................................
FD547216       <-- ..................................................
FD530748       <-- ..................................................
FD567597       <-- ..................................................
FD566179       <-- ..................................................
FD564013       --> CTTTCCATCACAATCTCCCGAACCATGGCGACGCCGAATCTAGAGTGCCG
FY441937       --> CTTTCCATCACAATCTCCCAAACCATGGCGACGCCGAATCTAGAGTGCCG
FY430456       --> CTTTCCATCACAATCTCCCAAACCATGGCGACGCCGAATCTAGAGTGCCG
FD562226       --> ...........gATCTCCCGAACCATGGCGACGCCGAATCTAGAGTGCCG
FD534957       --> ..................................................
EX747126       --> ..................................................

               151    -    201
UN20926        --> GATGTACGAAGCCAAGTACCCGGAAGTAGACATGGCGGTGATGATCCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- ..................................................
FD539616       <-- ..................................................
FD547216       <-- ..................................................
FD530748       <-- ..................................................
FD567597       <-- ..................................................
FD566179       <-- ..................................................
FD564013       --> CATGTACGAAGCCAAGTACCCGGAAGTAGACATGGCGGTGATGATCCAGG
FY441937       --> GATGTACGAAGCCAAGTACCCGGAAGTAGACATGGCGGTGATGATCCAGG
FY430456       --> GATGTACGAAGCCAAGTACCCGGAAGTAGACATGGCGGTGATGATCCAGG
FD562226       --> CATGTACGAAGCCAAGTACCCGGAAGTAGACATGGCGGTGATGATCCAGG
FD534957       --> ..................................................
EX747126       --> ..................................................

               201    -    251
UN20926        --> TCAAAAGCATCGCCGACATGGGAGCCTACGTGTCGCTCCTCGAGTACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- ..................................................
FD539616       <-- ..................................................
FD547216       <-- ..................................................
FD530748       <-- ..................................................
FD567597       <-- ..................................................
FD566179       <-- ..................................................
FD564013       --> TCAAAAGCATCGCCGACATGGGAGCCTACGTCTCCCTCCTCGAGTACAAC
FY441937       --> TCAAAAGCATCGCCGACATGGGAGCCTACGTGTCGCTCCTCGAGTACAAC
FY430456       --> TCAAAAGCATCGCCGACATGGGAGCCTACGTGTCGCTCCTCGAGTACAAC
FD562226       --> TCAAAAGCATCGCCGACATGGGAGCCTACGTCTCCCTCCTCGAGTACAAC
FD534957       --> ..................................................
EX747126       --> ..................................................

               251    -    301
UN20926        --> AACACGGAAGGGATGATCCTCTTTTCGGAGCTCTCCCGCCGTCGGATCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- ..................................................
FD539616       <-- ..................................................
FD547216       <-- ..................................................
FD530748       <-- ..................................................
FD567597       <-- ..................................................
FD566179       <-- ..................................................
FD564013       --> AACACGGAAGGGATGATCCTCTTCTCCGAGCTCTCCCGCCGTCGGATCCG
FY441937       --> AACACGGAAGGGATGATCCTCTTTTCGGAGCTCTCCCGCCGTCGGATCCG
FY430456       --> AACACGGAAGGGATGATCCTCTTTTCGGAGCTCTCCCGCCGTCGGATCCG
FD562226       --> AACACGGAAGGGATGATCCTCTTCTCCGAGCTCTCCCGCCGTCGGATCCG
FD534957       --> ..................................................
EX747126       --> ..................................................

               301    -    351
UN20926        --> GAGCGTCAGCAGCCTGATCAAGGTCGGGAAGATCGAGCCCGTCATGGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- ..................................................
FD539616       <-- ..................................................
FD547216       <-- ..................................................
FD530748       <-- ..................................................
FD567597       <-- ..................................................
FD566179       <-- ..................................................
FD564013       --> GAGCGTCAGCAGCCTGATCAAGGTCGGGAAGATCGAGCCCGTCATGGTCC
FY441937       --> GAGCGTCAGCAGCCTGATCAAGGTCGGGAAGATCGAGCCCGTCATGGTCC
FY430456       --> GAGCGTCAGCAGCCTGATCAAGGTCGGGAAGATCGAGCCCGTCATGGTCC
FD562226       --> GAGCGTCAGCAGCCTGATCAAGGTCGGGAAGATCGAGCCCGTCATGGTCC
FD534957       --> ............................................gGGTCC
EX747126       --> ..................................................

               351    -    401
UN20926        --> TGCGTGTGGACAAGGAGAGGGGGTACATTGATCTGAGCAAACGAAGGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- ..................................................
FD539616       <-- ..................................................
FD547216       <-- ..................................................
FD530748       <-- ..................................................
FD567597       <-- ..................................................
FD566179       <-- ..................................................
FD564013       --> TGCGTGTGGACAAGGAGAGGGGGTACATTGATCTGAGCAAACGAAGGGTT
FY441937       --> TGCGTGTGGACAAGGAGAGGGGGTACATTGATCTGAGCAAACGAAGGGTT
FY430456       --> TGCGTGTGGACAAGGAGAGGGGGTACATTGATCTGAGCAAACGAAGGGTT
FD562226       --> TGCGTGTGGACAAGGAGAGGGGGTACATTGATCTGAGCAAACGAAGGGTT
FD534957       --> TGCGTGTGGACAAGGAGAGGGGGTACATTGATCTGAGCAAACGAAGGGTT
EX747126       --> ...................................AGCAAGCGCAGGGTC

               401    -    451
UN20926        --> AGCGAGGAGGATATT-CAGACTTGTGAAGAGAGGTATAACAAGAGCAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- ..................................................
FD539616       <-- ..................................................
FD547216       <-- ..................................................
FD530748       <-- ..................................................
FD567597       <-- ..................................................
FD566179       <-- ..................................................
FD564013       --> AGCGAGGAGGATATTTCAGACTTGTGAAGAGAGGTATAACAAGAGCAAGC
FY441937       --> AGCGAGGAGGATATT-CAGACTTGTGAAGAGAGGTACAACAAGAGCAAGC
FY430456       --> AGCGAGGAGGATATT-CAGACTTGTGAAGAGAGGTACAACAAGAGCAAGC
FD562226       --> AGCGAGGAGGATATT-CAGACTTGTGAAGAGAGGTATAACAAGAGCAAGC
FD534957       --> AGCGAGGAGGATATT-CAGACTTGTGAAGAGAGGTATAACAAGAGCAAGC
EX747126       --> AGCGAGGAGGACATT-CAGACTTGTGAAGAGAGGTATAACAAGAGCAAGC

               451    -    501
UN20926        --> TCGTTCATTCTATCATGCGCCACGTTGCTGAGACCCTTTCTCTCGATTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD539616       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547216       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD530748       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD567597       <-- ..................................................  Raphanus sativus var. oleiformis
FD566179       <-- ..................................................  Raphanus sativus var. oleiformis
FD564013       --> TCGTTCACCCTATCATGCGCCACGTTGCTGAGACCCTTTCTCTCGATTTG  Raphanus sativus var. oleiformis
FY441937       --> TCGTTCATTCTATCATGCGTCACGTTGCTGAGACCCTTTCTCTCGATTTG  Raphanus sativus cv GSK3-1
FY430456       --> TCGTTCATTCTATCATGCGTCACGTTGCTGAGACCCTTTCTCTCGATTTG  Raphanus sativus cv GSK3-1
FD562226       --> TCGTTCACTCTATCATGCGCCACGTTGCTGAGACCCTTTCTCTCGATTTG  Raphanus sativus var. oleiformis
FD534957       --> TCGTTCACTCTATCATGCGCCACGTTGCTGAGACCCTTTCTCTCGATTTG  Raphanus raphanistrum subsp. maritimus
EX747126       --> TCGTTCATTCTATCATGCGCCACGTTGCCGAGACTCTTTCTCTCGATTTG  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN20926        --> GAGGACTTGTATGTGAACATTGGTTGGCCTTTGTACCGAAAGTATGGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- .........................................GTATGGACA
FD539616       <-- ..................................................
FD547216       <-- ..................................................
FD530748       <-- ..................................................
FD567597       <-- ..................................................
FD566179       <-- ..................................................
FD564013       --> GAGGACTTGTATGTGAACATTGGTTGGCCTTTGTACCGAAAGTATGGTCA
FY441937       --> GAGGACTTGTATGTGAACATTGGTTGGCCTTTGTACCGAAAGTATGGTCA
FY430456       --> GAGGACTTGTATGTGAACATTGGTTGGCCTTTGTACCGAAAGTATGGTCA
FD562226       --> GAGGACTTGTATGTGAACATTGGTTGGCCTTTGTACCGAAAGTATGGTCA
FD534957       --> GAGGACTTGTATGTGAACATTGGTTGGCCTTTGTACCGAAAGTATGGTCA
EX747126       --> GAGGACTTGTATGTGAACATTGGTTGGCCTTTGTACCGAAAGTATGGTCA

               551    -    601
UN20926        --> TGCTTTTGAGGCCTTCAAGGTCCTGGTGACTGATCCTGATTCTGTGTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- TGCTTTTGAGGCCTTCAAGGTCCTGGTGACTGATCCTGATTCTGTGTTGG  Raphanus raphanistrum subsp. maritimus
FD539616       <-- .................AGGTCTTAGTGACTGATCCTGACTCTGTGTTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547216       <-- .......................................TTCTGTGTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD530748       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD567597       <-- ..................................................  Raphanus sativus var. oleiformis
FD566179       <-- ..................................................  Raphanus sativus var. oleiformis
FD564013       --> TGCTTTTGAGGCCTTCAAGGTCCTGGTGACTGATCCTGATTCTGTGTTGG  Raphanus sativus var. oleiformis
FY441937       --> TGCTTTTGAGGCCTTCAAGGTCTTGGTTACTGATCCTGATTCTGTGTTGG  Raphanus sativus cv GSK3-1
FY430456       --> TGCTTTTGAGGCCTTCAAGGTCTTGGTTACTGATCCTGATTCTGTGTTGG  Raphanus sativus cv GSK3-1
FD562226       --> TGCTTTTGAGGCCTTCAAGGTCCTGGTGACTGATCCTGATTCTGTGTTGG  Raphanus sativus var. oleiformis
FD534957       --> TGCTTTTGAGGCCTTCAAGGTCCTGGTGACTGATCCTGATTCTGTGTTGG  Raphanus raphanistrum subsp. maritimus
EX747126       --> TGCTTTTGAGGCCTTCAAGGTCCTGGTGACTGATCCTGATTCTGTGTTGG  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN20926        --> GTTCACTCACCCGTGAGATCAAAGAAGTTGGTTCTGATGGGCAGGAGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- GTTCCCTCACCCGTGAGATCAAAGAAGTTGGTTCTGATGGGCAGGAGGTG  Raphanus raphanistrum subsp. maritimus
FD539616       <-- GTTCACTCACCCGTGAGATCAAAGAAGTTGGTTCTGATGGGCAGGAGGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD547216       <-- GTTCACTCACCCGTGAGATCAAAGAAGTTGGTTCTGATGGGCAGGAGGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD530748       <-- .....................................TGGGCAGGAGGTG  Raphanus raphanistrum subsp. maritimus
FD567597       <-- ..................................................  Raphanus sativus var. oleiformis
FD566179       <-- ..................................................  Raphanus sativus var. oleiformis
FD564013       --> GTTCACTCACCCGTGAGATCAAAGAAGTTGGTCCTGATGGG.........  Raphanus sativus var. oleiformis
FY441937       --> GTTCACTCACCCGTGAGATCAAAGAAGTTGGTTCTGATGGGCAGGAGGTG  Raphanus sativus cv GSK3-1
FY430456       --> GTTCACTCACCCGTGAGATCAAAGAAGTTGGTTCTGATGGGCAGGAGGTG  Raphanus sativus cv GSK3-1
FD562226       --> GTTCACTCACCCGTGAGATCAAAGAAGTTGGTCCTGATGGGCAGGAGGTG  Raphanus sativus var. oleiformis
FD534957       --> GTTCACTCACCCGTGAGATCAAAGAAGTTGGTCCTGATGGGCAGGAGGTG  Raphanus raphanistrum subsp. maritimus
EX747126       --> GTTCACTCACCCGTGAGATCAAAGAAGTTGGGCCTGATGGGCAGGAGGTG  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN20926        --> ACTAAAGTTGTACCTGCTGTTACGGAAGAAGTGAAAGAAGCACTTGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- ACAAAATTTGTACCTGCTGTTACGGAAGAAGTGAAATAAGCACTTGTGAA
FD539616       <-- ACAAAAGTTTTACCTGCTGTTACGGAAGAAGTGAAAGAAGCACTTGTGAA
FD547216       <-- ACTAAAGTTGTACCTGCTGTTACGTAAGAAGTGAAAGAAGCACTTGTGAA
FD530748       <-- ACTAGAGTTGTACCTGCTGTTACGGAAGAAGTGAAAGAAGCACTTGTGAA
FD567597       <-- ............................AAGTGAAAGAAGCACTTGTGAA
FD566179       <-- ..................................................
FD564013       --> ..................................................
FY441937       --> ACTAAAGTTGTACCTGCTGTTACGGAAGAAGTGAAAGAAGCACTTGTGAA
FY430456       --> ACTAAAGTTGTACCTGCTGTTACGGAAGAAGTGAAAGAAGCACTTGTGAA
FD562226       --> ACTAGAGTTGTACCTGCTGTTACGGAAGAAGTGAAAGAAGCACTTGTGAA
FD534957       --> ACTAGAGTTGTACCTGCTGTTACGGAAGAAGTGAAAGAAGCACTTGTGAA
EX747126       --> ACTAGAGTTGTACCTGCTGTTACGGAAGAAGTGAAAGAAGCACTTGTGAA

               701    -    751
UN20926        --> GAACATTAGGAGGAGAATGACTCCACAACCAATGAAAATCCGTGCTGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- GAACATTAGGAGGAGAATGACTCCACAACCAATGAAAATCCGTGCTGATA
FD539616       <-- GAACATTAGGAGGAGAATGACTCCACAACCAATGAAAATCCGTGCTGATA
FD547216       <-- GGACATTAGGAGGAGAATGACTCCACAACCAATGAAAATCCGTGCTGATA
FD530748       <-- GAACATTAGGAGGAGAATGACTCCACAACCAATGAAAATCCGTGCTGATA
FD567597       <-- GAACATTAGGAGGAGAATGACTCCACAACCAATGAAAATCCGTGCTGATA
FD566179       <-- ..................................................
FD564013       --> ..................................................
FY441937       --> GAACATTAGGAGGAGAATGACTCCACAACCAATGAAAATCCGTGCTGATA
FY430456       --> GAACATTAGGAGGAGAATGACTCCACAACCAATGAAAATCCGTGCTGATA
FD562226       --> GAACATTAGGAGGAGAATGACTCCACAACCAATGAAAATCCGTGCTGATA
FD534957       --> GAACATTAGGAGGAGAATGACTCCACAACCAATGAAAATCCGTGCTGATA
EX747126       --> GAACATTAGGAGGAGAATGACTCCACAACCAATGAAAATCCGTGCTGATA

               751    -    801
UN20926        --> TCGAGTTGAAATGTTTTCAGTTTGACGGAGTTGTTCACATCAAGGAGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- TCGAGTTGAAATGTTTTCAGTTTGACGGAGTTGTTCACATCAAGGAGGCC
FD539616       <-- TCGAGTTGAAATGTTTTCAGTTTGACGGAGTTGTTCACATCAAGGAGGCC
FD547216       <-- TCGAGTCGAAATGTTTTCAGTTTGACGGAGTTGTTCACATCAAGGAGGCC
FD530748       <-- TCGAGTTGAAATGTTTTCAGTTTGACGGAGTTGTTCACATCAAGGAGGCC
FD567597       <-- TCGAGTTGAAATGTTTTCAGTTTGACGGAGTTGTTCACATCAAGGAGGCC
FD566179       <-- ..................................................
FD564013       --> ..................................................
FY441937       --> TCGAGTTGAAATGTTTTCAGTTTGACGGAGTTGTTCACATCAAGGAGGCC
FY430456       --> TCGAGTTGAAATGTTTTCAGTTTGACGGAGTTGTTCACATCAAGGAGGCC
FD562226       --> TCGAGTTGAAATGTTTTCAGTTTGA.........................
FD534957       --> TCGAGTTGAAATGTTTTCAGTTTGACGGAGTTGTTCACATCAAGGAGGCC
EX747126       --> TCGAGTTGAAATGTTTTCAGTTTGACGGAGTTGTTCCCATCAAGGAGGCC

               801    -    851
UN20926        --> ATGAGAAAGGCTGAAGCTGCTGGAAACGATGCTTGTCCTGTTAAGATTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- ATGAGAAAGGCTGAAGCTGCTGGAAACGATGCTTGTCCTGTTAAGATCAA
FD539616       <-- ATGAGAAAGGCTGAAGCTGCTGGAAACGATGCTTGTCCTGTTAAGATTAA
FD547216       <-- ATGAGAAAGGCTGAAGCTGCTGGAAACGATGCTTGTCCTGTTAAGATTAA
FD530748       <-- ATGAGAAAGGCTGAAGCTGCTGGAAACGATGCTTGTCCTGTTAAGATTAA
FD567597       <-- ATGAGAAAGGCTGAAGCTGCTGGAAACGATGCTTGTCCTGTTAAGATTAA
FD566179       <-- ..................................................
FD564013       --> ..................................................
FY441937       --> ATGAGAAAGGCTGAAGCTGCTGGAAACGATGCTTGTCCTGTTAAGATTAA
FY430456       --> ATGAGAAAGGCTGAAGCTGCTGGAAACGATGCTTGTCCTGTTAAGATTAA
FD562226       --> ..................................................
FD534957       --> ATGAGAAAGGCTGAAGCTGCTGGAAACGATGCTTGTCCTGTTAAGATTAA
EX747126       --> ATGAGAAAGGCTGAAGCTGCTGGAAACGATGCTTGTCCTGTTAAGATTAA

               851    -    901
UN20926        --> ACTGGTTGCTCCACCTCTGTATGTCCTTACTACTCACACACTTGACAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- ACTGGTTGCTCCACCTCTGTATGTCCTTACTACTCACACACTTGACAAGG
FD539616       <-- ACTGGTTGCTCCACCTCTGTATGTCCTTACTACTCACACACTTGACAAGG
FD547216       <-- ACTGGTTGCTCCACCTCTGTATGTCCTTACTACTCACACACTTGACAAGG
FD530748       <-- ACTGGTTGCTCCACCTCTGTATGTCCTTACTACTCACACACTTGACAAGG
FD567597       <-- ACTGGTTGCTCCACCTCTGTATGTCCTTACTACTCACACACTTGACAAGG
FD566179       <-- ..................................................
FD564013       --> ..................................................
FY441937       --> ACTGGTTGCTCCACCTCTGTATGTCCTTACTACTCACACACTTGACAAGG
FY430456       --> ACTGGTTGCTCCACCTCTGTATGTCCTTACTACTCACACACTTG......
FD562226       --> ..................................................
FD534957       --> ACTGGTTGCTCCACCTCTGTATGTCCTTACTACTCACACACTTGACAAGG
EX747126       --> ACTGGTCGCTCCACCTCTGTATGTCTTTACTACTCACACACTTGACAAGG

               901    -    951
UN20926        --> ACCAAGGGATTAAAATTCTAGACGAGGCTATAGTAGCTTGCACTGAGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- AGCAAGGGATTAAAATTCTAGACGAGGCTATAGTAGCTTGCACTGAGACA
FD539616       <-- ACCAAGGGATTAAAATTCTAGACGAGGCTATAGTAGCTTGCACTGAAACA
FD547216       <-- ACCAAGGGATTAAAATTCTAGACGAGGCTATAGTAGCTTGCACTGAGACA
FD530748       <-- ACCAAGGGATTAAAATTCTAGACGAGGCTATAGTAGCTTGCACTGAAACA
FD567597       <-- ACCAAGGGATTAAAATTCTAGACGAGGCTATAGTAGCTTGCACTGAGACA
FD566179       <-- ...................AGACGAGGCTATAGTAGCTTGCACTGAGACA
FD564013       --> ..................................................
FY441937       --> ACCAA.............................................
FY430456       --> ..................................................
FD562226       --> ..................................................
FD534957       --> ACCAAGGGATTAAAATTCTAGACGAGGCTATAGTAGCTTGCACTGAAACA
EX747126       --> ACCAAGGGATTAAAATTCTAGACGAGGCTATAGTAGCTTGCACTGAAACA

               951    -   1001
UN20926        --> ATTGAGAAACACAAAGGCAAGCTCGTCGTTAAAGAGGCACCTAGAGCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- ATTGAGAAACACAAGGGCAAGCTCGTCGTTAAAGAGGCACCTAGAGCTGT
FD539616       <-- ATTGAGAAACACAAAGGCAAGCTCGTCGTTAAAGAGGCACCTAGAGCTGT
FD547216       <-- ATTGAGAAACACAAAGGCAAGCTCGTCGTTAAAGAGGCACCTAGAGCTGT
FD530748       <-- ATTGAGAAACACAAAGGCAAGCTCGTCGTTAAAGAGGCACCTAGAGCTGT
FD567597       <-- ATTGAGAAACACAAAGGCAAGCTCGTCGTTAAAGAGGCACCTAGAGCTGT
FD566179       <-- ATTGAGAAACACAAAGGCAAGCTTGTCGTTAAAGAGGCACCTAGAGCTGT
FD564013       --> ..................................................
FY441937       --> ..................................................
FY430456       --> ..................................................
FD562226       --> ..................................................
FD534957       --> ATTGAGAAACACAAAGGCAAGCTCGTCGTTAAAGAGGCACCTAGAGCTGT
EX747126       --> ATTGAGAAACACAAAGGCAAGCTCGTCGTTAAAGAGGCACCTAGAGCTGT

               1001   -   1051
UN20926        --> GAGTGAACGAGATGATAAGTTGCTGACAGAACACATGGCGAAGCTGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- GAGTGAACGAGATGATAAGTTGCTGACAGAACACATGGCGAAGCTGAGAA
FD539616       <-- GAGTGAACGTGATGATAAGTTGCTGACAGAACACATGGCGAAGCTGAGAA
FD547216       <-- GAGTGAACGAGATGATAAGTTGCTGACAGAACACATGGCGAAGCTGAGAA
FD530748       <-- GAGTGAACGAGATGGTAAGTTGCTGACAGAACACATGGCGAAGCTGAGAA
FD567597       <-- GAGTGAACGGGATGATAAGTTGCTGACAGAACACATGGCGAAGCTGAGAA
FD566179       <-- GAGTGAACGGGATGATAAGTTGCTGACAGAACACATGGGGAAGCTGAGAA
FD564013       --> ..................................................
FY441937       --> ..................................................
FY430456       --> ..................................................
FD562226       --> ..................................................
FD534957       --> GAGTGAACGAGATGGTAAGTTGCTGACAGAACACATGGC...........
EX747126       --> GAGTGAACGAGATGATAAGTTGCTGACAGA-CACATGGCGAAGCTGAGA-

               1051   -   1101
UN20926        --> TGGACAATGAAGAAATTAGCGGCGATGAAGAAAGTGGAGAAGAAGAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- TGGACAATGAAGAAATTAGCGGCGATGAAGAAAGTGGAGAAGAAGAAGAG
FD539616       <-- TGGACAATGAAGAAATTAGCGGCGATGAAGAAAGTGGAGAAGAAGAAGAG
FD547216       <-- TGGATAATGAAGAAATTAGCGGCGATGAAGAAAGTGGAGAAGAAGAAGAG
FD530748       <-- TGGACAATGAAGAAATTAGCGGCGATGAAGAAAGTGGAGAAGAAGAAGAG
FD567597       <-- TGGACAATGAAGAAATTAGTGGCGATGAAGAAAGTGGAGAAGAGGAAGAG
FD566179       <-- TGGACAATGAAGAAATTAGCGGCGATGAAGAAAGTGGAGAAGAGGAAGAG
FD564013       --> ..................................................
FY441937       --> ..................................................
FY430456       --> ..................................................
FD562226       --> ..................................................
FD534957       --> ..................................................
EX747126       --> TGGACAATGAAGAAATTAGCGGCGATGAAGAAAGTGGAGAAGAta.....

               1101   -   1151
UN20926        --> GACACAGGGATGGGCGACGTTGATATCGACTGTGGCGCCGGAATCATTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- GACACAGGGATGGGCGACGTTGATATCGACTGTGGCGTCGGAATCATTGA
FD539616       <-- GACACAGGGATGGGCGACGTTGATATCGACTGTGGCGCCGGAATCATTGA
FD547216       <-- GACACAGGGATGGGCGACGTTGATATCGACGGTGGCGCCGGAATCATTGA
FD530748       <-- GACACAGGGATGGGGGACGTTGATATCGACTGTGGCGCCGGAATCATTGA
FD567597       <-- GACACAGGGATGGGCGACGTTGATATCGACTGTGGCGCCGGAATCATTGA
FD566179       <-- GACACAGGGATGGGCGACGTTGATATCGACTGTGGCGCCGGAATCATTGA
FD564013       --> ..................................................
FY441937       --> ..................................................
FY430456       --> ..................................................
FD562226       --> ..................................................
FD534957       --> ..................................................
EX747126       --> ..................................................

               1151   -   1201
UN20926        --> GTAGGATTTGCCTGTTTTACAACTAATTTTCTTTCTATTTGTTCTACCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- GTAGGATTTGCCTGTTTTACAACTAATTTTCTTTCTATTTGTTCTACCAA
FD539616       <-- GTAGGATTTGCCTGTTTTACAACTAATTTTCTTTCTATTTGTTCTACCAA
FD547216       <-- GTAGGATTTGCCTGTTTTACAACTAATTTTCTTTCTATTTGTTCTGCCAA
FD530748       <-- GTAGGATTTGCCTGTTTTTCAACTAATTTTCTTTCTATTTGTTCTACCAA
FD567597       <-- GTAGGATTTGCCTGTTTTACAACTAATTTTCTTTCTATTTGTTCTACCAA
FD566179       <-- GTAGGATTTGCCTGTTTTACAACTAATTTTCTTTCTATTTGTTCTACCAA
FD564013       --> ..................................................
FY441937       --> ..................................................
FY430456       --> ..................................................
FD562226       --> ..................................................
FD534957       --> ..................................................
EX747126       --> ..................................................

               1201   -   1251
UN20926        --> CCAGTCTGAGAGTATATTTTGCTTTTAAAAGAAGAAAACATCCAAATAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- CCAGTCTGAGAGTATATTTTGCTTTTAAAAGAAGAAAACATCCAAATAGT
FD539616       <-- CCAGTCTGAGAGTATATTTTGCTTTTAAAAGAAGAAAACATCCAAATAGT
FD547216       <-- CCAATCTGAGAGTATATTTTGCTTT-AAAAG---AAAACATCC-AAGAGT
FD530748       <-- CCAGTCTGAGAGTATATTTTGCTTTTAAAAGAAGAAAACATCCAAATAGT
FD567597       <-- CCAGTCTGAGAGTATATTTTGCTTTTAAAAGAAGAAAACATCCAAATAGT
FD566179       <-- CCAGTTTGAGAGTATATTTTGCTTTTAAAAGAAGAAAACATCCAAATAGT
FD564013       --> ..................................................
FY441937       --> ..................................................
FY430456       --> ..................................................
FD562226       --> ..................................................
FD534957       --> ..................................................
EX747126       --> ..................................................

               1251   -   1301
UN20926        --> TACCCGTTGAGGGGTAACATGTCAATCATTACATTCATGACGCTTTTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958791       <-- TACCCGTTGAGGGGTAACATGTCAATCATTACATTCATGACGCTTTTATA
FD539616       <-- TACCCGTTGAGGGGTAACATGTCAATCATTACATTCATGACGCTTTTATA
FD547216       <-- TACCCGTTGAGGGGTCACATGTCAATCATTACATTCAAGACGATTTTATA
FD530748       <-- TACCCGTTGAGGGGTAACATGTCAATCATTACATTCATGACGCTTTTATA
FD567597       <-- TACCCGTTGAGGGGTAACATGTCAATCATTACATTCATGACGCTTTTATA
FD566179       <-- TACCCGTTGTGGGGTAACATGTCAATCATTACATTCATGACGCTTTTATA
FD564013       --> ..................................................
FY441937       --> ..................................................
FY430456       --> ..................................................
FD562226       --> ..................................................
FD534957       --> ..................................................
EX747126       --> ..................................................

               1301   -   1351
UN20926        --> AAGATTGATGTATTTTTGCG
                   ~~~~~~~~~~~~~~~~~~~~
FD958791       <-- AAGc................
FD539616       <-- AAGATTGATGTATTTTTGC.
FD547216       <-- A...................
FD530748       <-- AAGATTGATGTATTTTTGC.
FD567597       <-- AAGATTGATGTATTTTTGC.
FD566179       <-- AAGATTGATGTATTTTTGCG
FD564013       --> ....................
FY441937       --> ....................
FY430456       --> ....................
FD562226       --> ....................
FD534957       --> ....................
EX747126       --> ....................