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Alignment for radish unigene UN21150

               1      -     51
UN21150        --> CAACTATATATAAGGTAAGAAGAACAAGTGATATCTCAATTGATAGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965464       <-- CAACTATATATAAGGTAAGAAGAACAAGTGACATCTCAATTGATAGAAGT
EY929747       <-- ................AAGAAGAACAAGTGATATCTCAATTGATAGAAGT
FD557664       <-- ..................................................
FD937893       <-- ..................................................
FD561621       <-- ..................................................
FD553019       --> CAACTATATATAAGGTAAGAAGAACAAGTGATATCTCAATTGATAGAAGT
EY926102       --> ................AAGAAGAACAAGTGATATCTCAATTGATAGAAGT
FD552762       --> ..................cAAGAACAAGTGATATCTCAATTGATAGAAGT
FD565735       --> ................................ATCTCAATTGATAGAAGT
FD934417       --> ................................ATCTCAATTGATAGAAGT
FD985456       --> .........................................ggTAGAAGT
FD553723       --> ..................................................
EX893138       --> ..................................................

               51     -    101
UN21150        --> TTAGATAACTGAAAAGCAAAAGAAAGTAAACATAACATCGCAAGTCGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965464       <-- TTAGATAACTGAAAAGCAAAAGAAAGTAAACATAACATCGCAAGTCGCAA  Raphanus raphanistrum subsp. maritimus
EY929747       <-- TTAGATAAATGAAAAGCAAAAGAAAGTAAACATAACATCGCAAGTCGCAA  Raphanus sativus var. oleiformis
FD557664       <-- ..............cGCAAAAGAAAGTAAACATAACATCGCAAGTCGCAA  Raphanus raphanistrum subsp. landra
FD937893       <-- ..................................................  Raphanus sativus var. oleiformis
FD561621       <-- ..................................................  Raphanus sativus var. oleiformis
FD553019       --> TTAGATAACTGAAAAGCAAAAGAAAGTAAACATAACATCGCAAGTCGCAA  Raphanus raphanistrum subsp. landra
EY926102       --> TTAGATAAATGAAAAGCAAAAGAAAGTAAACATAACATCGCAAGTCGCAA  Raphanus sativus var. oleiformis
FD552762       --> TTAGATAACTGAAAAGCAAAAGAAAGTAAACATAACATCGCAAGTCGCAA  Raphanus raphanistrum subsp. landra
FD565735       --> TTAGATAAATGAAAAGCAAAAGAAAGTAAACATAACATCGCAAGTCGCAA  Raphanus sativus var. oleiformis
FD934417       --> TTAGATAAATGAAAAGCAAAAGAAAGTAAACATAACATCGCAAGTCGCAA  Raphanus sativus var. oleiformis
FD985456       --> TTAGATAACTGAAAAGAAAAAGAAAGTAAACATAACATCGCAAGTCGCAA  Raphanus raphanistrum subsp. landra
FD553723       --> ..............cGCAAAAGAAAGTAAACATAACATCGCAAGTCGCAA  Raphanus raphanistrum subsp. landra
EX893138       --> ..................................................  Raphanus sativus var. oleiformis

               101    -    151
UN21150        --> CAAAAGAAACAGAAGAGCATAGATATGCATTTTTGGTAACATCTCTCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965464       <-- CAAAAGAAACAGAAGAGCATAGATATGCATTTTTGGTAACATCTCTCAGA
EY929747       <-- CAGAAGAAACAGAAGAGCATAGATATGCATTTTTGGTAACATCTCTCAGA
FD557664       <-- CAAAAGAAACAGAAGAGCATAGATATGCATTTTTGGTAACATCTCTCAGA
FD937893       <-- ..................................................
FD561621       <-- ..................................................
FD553019       --> CAAAAGAAACAGAAGAGCATAGATATGCATTTTTGGTAACATCTCTCAGA
EY926102       --> CAGAAGAAACAGAAGAGCATAGATATGCATTTTTGGTAACATCTCTCAAA
FD552762       --> CAAAAGAAACAGAAGAGCATAGATATGCATTTTTGGTAACATCTCTCAAA
FD565735       --> CAAAAGAAACAGAAGAGCATAGATATGCATTTTTGGTAACATCTCTCAAA
FD934417       --> CAAAAGAAACAGAAGAGCATAGATATGCATTTTTGGTAACATCTCTCAGA
FD985456       --> CAAAAGAAACAGAAGAGCATAGATATGCATTTTTGGTAACATCTCTCAGA
FD553723       --> CAAAAGAAACAGAAGAGCATAGATATGCATTTTTGGTAACATCTCTCAAA
EX893138       --> ..................................................

               151    -    201
UN21150        --> AGAATGCAAAAGCTAATTAATCGGAGGAATTTAACAACAAAAACAAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965464       <-- AGAATGCAAAAGCTAATTAATCGGAGGAATTTAACAACAAAAACAAAGCT  Raphanus raphanistrum subsp. maritimus
EY929747       <-- AGAATGCAAAAGCTAATTAATCGGAGGAATTTAACAAGAAAAACAAAGCT  Raphanus sativus var. oleiformis
FD557664       <-- AGAATGCAAAAGCTAATTAATCGGAGGAATTTAACAACAAAAACAAAGCT  Raphanus raphanistrum subsp. landra
FD937893       <-- ...................ATCGGAGGAATTTAACAAGAAAAACAAAGCT  Raphanus sativus var. oleiformis
FD561621       <-- ...........................................acAAGCT  Raphanus sativus var. oleiformis
FD553019       --> AGAATGCAAAAGCTAATTAATCGGAGGAATTTAACAACAAAAACAAAGCT  Raphanus raphanistrum subsp. landra
EY926102       --> AGAATGCAAAAGCTAATTAATCGGAGGAATTTAACAAGAAAAACAAAGCT  Raphanus sativus var. oleiformis
FD552762       --> AGAATGCAAAAGCTAATTAATCGGAGGAATTTAACAACAAAAACAAAGCT  Raphanus raphanistrum subsp. landra
FD565735       --> AGAATGCAAAAGCTAATTAATCGGAGGAATTTAACAAGAAAAACAAAGCT  Raphanus sativus var. oleiformis
FD934417       --> AGAATGCAAAAGCTAATTAATCGGAGGAATTTAACAAGAAAAACAAAGCT  Raphanus sativus var. oleiformis
FD985456       --> AGAATGCAAAAGCTAATTAATCGGAGGAATTTAACAACAAAAACAAAGCT  Raphanus raphanistrum subsp. landra
FD553723       --> AGAATGCAAAAGCTAATTAATCGGAGGAATTTAACAACAAAAACAAAGCT  Raphanus raphanistrum subsp. landra
EX893138       --> ..................................................  Raphanus sativus var. oleiformis

               201    -    251
UN21150        --> GAGATGAGATGAGTTTTCACTTGGTGTACAACACATCTTCCCATGGGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965464       <-- GAGATGAGATGAGTTTTCACTTGGTGTACAACACATCTTCCCATGGGTGA
EY929747       <-- GAGATGAGATGAGTTTTCACTTGGTGTACAACACATCTTCCCATGGGTGA
FD557664       <-- GAGATGAGATGAGTTTTCACTTGGTGTACAACACATCTTCCCATGGGTGA
FD937893       <-- GAGATGAGATGAGTTTTCACTTGGTGTACAACACATCTTCCCATGGGTGA
FD561621       <-- GAGATGAGATGAGTTT-CACTTGGTGTACAACACATCTTCCCATGGGTGA
FD553019       --> GAGATGAGATGAGTTTTCACTTGGTGTACAACACATCTTCCCATGGGTGA
EY926102       --> GAGATGAGATGAGTTTTCACTTGGTGTACAACACATCTTCCCATGGGTGA
FD552762       --> GAAATGAGATGAGTTTTCACTTGGTGTACAACACATCTTCCCATGGGTGA
FD565735       --> GAGATGAGATGAGTTTTCACTTGGTGTACAACACATCTTCCCATGGGTGA
FD934417       --> GAGATGAGATGAGTTTTCACTTGGTGTACAACACATCTTCCCATGGGTGA
FD985456       --> GAAATGAGATGAGTTTTCACTTGGTGTACAACACATCTTCCCATGGGTGA
FD553723       --> GAGATGAGATGAGTTTTCACTTGGTGTACAACACATCTTCCCATGGGTGA
EX893138       --> ..................................................

               251    -    301
UN21150        --> CGGTACAATGGCTGCTTCAACCTCTTCTGATCAAATGTGTGCCCAATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965464       <-- CGGTAAAGTGGCTGCTTCAACCTCTTCTGATCAAATGTGTGCCCAATCAA  Raphanus raphanistrum subsp. maritimus
EY929747       <-- CGGTACAATGGCTGCTTCAACCTCTTCTGATCAAATGTGTGCCCAATCAA  Raphanus sativus var. oleiformis
FD557664       <-- CGGTAAAGTGGCTGCTTCAACCTCTTCTGATCAAATGTGTGCCCAATCAA  Raphanus raphanistrum subsp. landra
FD937893       <-- CGGTACAATGGCTGCTTCAAC-TCTTCTGATCAAATGTGTGCCCAATCAA  Raphanus sativus var. oleiformis
FD561621       <-- CGGTACAATGGCTGCTTCAAC-TCTTCTGATCAAATGTGTGCCCAATCAA  Raphanus sativus var. oleiformis
FD553019       --> CGGTAAAGTGGCTGCTTCAACCTCTTCTGATCAAATGTGTGCCCAATCAA  Raphanus raphanistrum subsp. landra
EY926102       --> CGGTACAATGGCTGCTTCAACCTCTTCTGATCAAATGTGTGCCCAATCAA  Raphanus sativus var. oleiformis
FD552762       --> CGGTAAAGTGGCTGCTTCAACCTCTTCTGATCAAATGTGTGCCCAATCAA  Raphanus raphanistrum subsp. landra
FD565735       --> CGGTACAATGGCTGCTTCAACCTCTTCTGATCAAATGTGTGCCCAATCAA  Raphanus sativus var. oleiformis
FD934417       --> CGGTACAATGGCTGCTTCAACCTCTTCTGATCAAATGTGTGCCCAATCAA  Raphanus sativus var. oleiformis
FD985456       --> CGGTAAAGTGGCTGCTTCAACCTCTTCTGATCAAATGTGTGCCCAATCAA  Raphanus raphanistrum subsp. landra
FD553723       --> CGGTAAAGTGGCTGCTTCAACCTCTTCTGATCAAATGTGTGCCCAATCAA  Raphanus raphanistrum subsp. landra
EX893138       --> .......ATGGCTGCTTCAACCTCTTCTGATCAAATGTGTGCCCAATCAA  Raphanus sativus var. oleiformis

               301    -    351
UN21150        --> ACCGATGGAACGAGCAAGAACAAAGAGACCGTTGAGGTAACCGATCTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965464       <-- ACCGATGGAACGAGCAAGAACAAAGAGACCGTTGAGGTAACCGATCTGAA
EY929747       <-- ACCGATGGAACGAGCAAGAACAAAGAGACCGTTGAGGTAACCGATCTGAA
FD557664       <-- ACCGATGGAACGAGCAAGAACAAAGAGACCGTTGAGGTAACCGATCTGAA
FD937893       <-- ACCGATGGAACGAGCAAGAACAAAGAGACCGTTGAGGTAACCGATCTGAA
FD561621       <-- ACCGATGGAACGAGCAAGAACAAAGAGACCGTTGAGGTAACCGATCTGAA
FD553019       --> ACCGATGGAACGAGCAAGAACAAAGAGACCGTTGAGGTAACCGATCTGAA
EY926102       --> ACCGATGGAACGAGCAAGAACAAAGAGACCGTTGAGGTAACCGATCTGAA
FD552762       --> ACCGATGGAACGAGCAAGAACAAAGAGACCGTTGAGGTAACCGATCTGAA
FD565735       --> ACCGATGGAACGAGCAAGAACAAAGAGACCGTTGAGGTAACCGATCTGAA
FD934417       --> ACCGATGGAACGAGCAAGAACAAAGAGACCGTTGAGGTAACCGATCTGAA
FD985456       --> ACCGATGGAACGAGCAAGAACAAAGAGACCGTTGAGGTAACCGATCTGAA
FD553723       --> ACCGATGGAACGAGCAAGAACAAAGAGACCGTTGAGGTAACCGATCTGAA
EX893138       --> ACCGATGGAACGAGCAAGAACAAAAAAACCGTTGAGGTAACCCATCTGAA

               351    -    401
UN21150        --> CAATCTCATCGATCTCTTGCTTAGTGAACATCCCACTTCCAGCTAGAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965464       <-- CAATCTCATCGATCTCTTGCTTAGTGAACATCCCACTTCCAGCTAGAAGG
EY929747       <-- CAATCTCATCGATCTCTTGCTTAGTGAACATCCCACTTCCAGCTAGAAGG
FD557664       <-- CAATCTCATCGATCTCTTGCTTAGTGAACATCCCACTTCCAGCTAGAAGG
FD937893       <-- CAATCTCATCGATCTCTTGCTTAGTGAACATCCCACTTCCAGCTAGAAGG
FD561621       <-- CAATCTCATCGATCTCTTGCTTAGTGAACATCCCACTTCCAGCTAGAAGG
FD553019       --> CAATCTCATCGATCTCTTGCTTAGTGAACATCCCACTTCCAGCTAGAAGG
EY926102       --> CAATCTCATCGATCTCTTGCTTAGTGAACATCCCACTTCCAGCTAGAAGG
FD552762       --> CAATCTCATCGATCTCTTGCTTAGTGAACATCCCACTTCCAGCTAGAAGG
FD565735       --> CAATCTCATCGATCTCTTGCTTAGTGAACATCCCACTTCCAGCTAGAAGG
FD934417       --> CAATCTCATCGATCTCTTGCTTAGTGAACATCCCACTTCCAGCTAGAAGG
FD985456       --> CAATCTCATCGATCTCTTGCTTAGTGAACATCCCACTTCCAGCTAGAAGG
FD553723       --> CAATCTCATCGATCTCTTGCTTAGTGAACATCCCACTTCCAGCTAGAAGG
EX893138       --> CAATCTCATCGATCTCCTGCTTAGTGAACATCCCACTTCCAGCTAGAAGG

               401    -    451
UN21150        --> TCCAAGAAGAGAGACCCAATGGCTCCGTCAACGTTGAGTACAAGGTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965464       <-- TCCAAGAAGAGAGACCCAATGGCTCCc.......................  Raphanus raphanistrum subsp. maritimus
EY929747       <-- TCCAAGAAGAGAGACCCAATGGCTCCGTCAACGTTGAGTACAAGGTTGTT  Raphanus sativus var. oleiformis
FD557664       <-- TCCAAGAAGAGAGACCCAATGGCTCCATCAACGTTGAGTACGAGGTTGTT  Raphanus raphanistrum subsp. landra
FD937893       <-- TCCAAGAAGAGAGACCCAATGGCTCCGTCAACGTTGAGTACAAGGTTGTT  Raphanus sativus var. oleiformis
FD561621       <-- TCCAAGAAGAGAGACCCAATGGCTCCGTCAACGTTGAGTACAAGGTTGTT  Raphanus sativus var. oleiformis
FD553019       --> TCCAAGAAGAGAGACCCAATGGCTCCATCAACGTTGAGTACGAGGTTGTT  Raphanus raphanistrum subsp. landra
EY926102       --> TCCAAGAAGAGAGACCCAATGGCTCCGTCAACGTTGAGTACAAGGTTGTT  Raphanus sativus var. oleiformis
FD552762       --> TCCAAGAAGAGAGACCCAATGGCTCCATCAACGTTGAGTACGAGGTTGTT  Raphanus raphanistrum subsp. landra
FD565735       --> TCCAAGAAGAAAGACCCAATGGCTCCGTCAACGTTGAGTACAAGGTTGTT  Raphanus sativus var. oleiformis
FD934417       --> TCCAAGAAGAGAGACCCAATGGCTCCGTCAACGTTGAGTACAAGGTTGTT  Raphanus sativus var. oleiformis
FD985456       --> TCCAAGAAGAGAGACCCAATGGCTCCATCAACGTTGAGTACGAGGTTGTT  Raphanus raphanistrum subsp. landra
FD553723       --> TCCAAGAAGAGAGACCCAATGGCTCCATCAACGTTGAGTACGAGGTTGTT  Raphanus raphanistrum subsp. landra
EX893138       --> TCCAAGAAGAGAGA....................................  Raphanus sativus var. oleiformis

               451    -    501
UN21150        --> GGCCTTTGAGAGCGTGTAGCTCTCCACTGTTACTGCGTACTCCATGTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965464       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY929747       <-- GGCCTTTGAGAGCGTGTAGCTCTCCACTGTTACTGCGTACTCCATGTACT  Raphanus sativus var. oleiformis
FD557664       <-- GGCCTTTGAGAGCGTGTAGCTTTCCACCGTTACTGCGTACTCCATGTACT  Raphanus raphanistrum subsp. landra
FD937893       <-- GGCCTTTGAGAGCGTGTAGCTCTCCACTGTTACTGAGTACTCCATGTACT  Raphanus sativus var. oleiformis
FD561621       <-- GGCCTTTGAGAGCGTGTAGCTCTCCACTGTTACTGAGTACTCCATGTACT  Raphanus sativus var. oleiformis
FD553019       --> GGCCTTTGAGAGAGTGTAGCTTTCCACCGTTACTGCGTACTCCATGTACT  Raphanus raphanistrum subsp. landra
EY926102       --> GGCCTTTGAGAGCGTGTAGCTCTCCACTGTTACTGCGTACTCCATGTACT  Raphanus sativus var. oleiformis
FD552762       --> GGCCTTTGAGAGCGTGTAGCTTTCCACCGTTACTGCGTACTCCATGTACT  Raphanus raphanistrum subsp. landra
FD565735       --> GGCCTTTGAGAGCGTGTAGCTCTCCACTGTTACTGAGTACTCCATGTACT  Raphanus sativus var. oleiformis
FD934417       --> GGCCTTTGAGAGCGTGTAGCTCTCCACTGTTACTGAGTACTCCATGTACT  Raphanus sativus var. oleiformis
FD985456       --> GGCCTTTGAGAGCGTGTAGCTTTCCACCGTTACTGCGTACTCCATGTACT  Raphanus raphanistrum subsp. landra
FD553723       --> GGCCTTTGAGAGCGTGTAGCTTTCCACCGTTACTGCGTACTCCATGTACT  Raphanus raphanistrum subsp. landra
EX893138       --> ..................................................  Raphanus sativus var. oleiformis

               501    -    551
UN21150        --> TCACTGATGGGAAGTTAGACCTAGCAAATTTCTGGAGCAGCTCCACTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965464       <-- ..................................................
EY929747       <-- TCACTGATGGGAAGTTAGACCTAGCAAATTTCTGGAGCAGCTCCACTCTC
FD557664       <-- TCACTGATGGGAAGTTAGACCTAGCAAATTTCTGGAGCAGCTCCACTCTC
FD937893       <-- TCACTGATGGGAAGTTAGACCTAGCAAATTTCTGGAGCAGCTCCACTCTC
FD561621       <-- TCACTGATGGGAAGTTAGACCTAGCAAATTTCTGGAGCAGCTCCACTCTC
FD553019       --> TCACTGATGGGAAGTTAGACCTAGCAAATTTCTGGAGCAGCTCCACTCTC
EY926102       --> TCACTGATGGGAAGTTAGACCTAGCAAATTTCTGGAGCAGCTCCACTCTC
FD552762       --> TCACTGATGGGAAGTTAGACCTAGCAAATTTCTGGAGCAGCTCCACTCTC
FD565735       --> TCACTGATGGGAAGTTAGACCTAGCAAATTTCTGGAGCAGCTCCACTCTC
FD934417       --> TCACTGATGGGAAGTTAGACCTAGCAAATTTCTGGAGCAGCTCCACTCTC
FD985456       --> TCACTGATGGGAAGTTAGACCTAGCAAATTTCTGGAGCAGCTCCACTCTC
FD553723       --> TCACTGATGGGAAGTTAGACCTAGCAAATTTCTGGAGCAGCTCCACTCTC
EX893138       --> ..................................................

               551    -    601
UN21150        --> TTGTCTCTGTTGTCTCTGCTCTTGATCCTGTGTCCAATCCCAGGGACTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965464       <-- ..................................................
EY929747       <-- TTGTCTCTGTTGTCTCTGCTCTTGATCCTGTGTCCAATCCCAGGGACTCT
FD557664       <-- TTGTCTCTGTTGTCTCTGCTCTTGATCCTGTGTCCAATCCCc........
FD937893       <-- TTGTCTCTGTTGTCTCTGCTCTTGATCCTGTGTCCAATCCCAGGGACTCT
FD561621       <-- TTGTCTCTGTTGTCTCTGCTCTTGATCCTGTGTCCAATCCCAGGGACTCT
FD553019       --> TTGTCTCTGTTGTCTCTGCTCTTGATCCTGTGTCCAATCCCAGGGACTCT
EY926102       --> TTGTCTCTGTTGTCTCTGCTCTTGATCCTGTGTCCAATCCCAGGGACTCT
FD552762       --> TTGTCTCTGTTGTCTCTGCTCTTGATCCTGTGTCCAATCCCAGGGACTCT
FD565735       --> TTGTCTCTGTTGTCTCTGCTCTTGATCCTGTGTCCAATCCCAGGGACTCT
FD934417       --> TTGTCTCTGTTGTCTCTGCTCTTGATCCTGTGTCCAATCCCAGGGACTCT
FD985456       --> TTGTCTCTGTTGTCTCTGCTCTTGATCCTGTGTCCAATCCCAGGGACTCT
FD553723       --> TTGTCTCTGTTGTCTCTGCTCTTGATCCTGTGTCCAATCCCc........
EX893138       --> ..................................................

               601    -    651
UN21150        --> GATTCCCTTCTTCTTCATTCCCTCAACGAACTCATAAGGTGTGAGGTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965464       <-- ..................................................
EY929747       <-- GATTCCCTTCTTCTTCATTCCCc...........................
FD557664       <-- ..................................................
FD937893       <-- GATTCCCTTCTTCTTCATTCCCTCAACGAACTCATAAGGTGTGAGGTTCC
FD561621       <-- GATTCCCTTCTTCTTCATTCCCTCAACGAACTCATAAGGTGTGAGGTTCC
FD553019       --> GATTCCCTTCTTCTTCATTCCCTCAACGAACTCATAAGGTGTGAGGTTCC
EY926102       --> GATTCCCTTCTTCTTCATTCCCc...........................
FD552762       --> GATTCCCTTCTTCTTCATTCCCTCAACGAACTCATAAGGTGTGAGGTTCC
FD565735       --> GATTCCCTTCTTCTTCATTCCCTCAACGAACTCATAAGGTGTGAGGTTCC
FD934417       --> GATTCCCTTCTTCTTCATTCCCTCAACGAACTCATAAGGTGTGAGGTTCC
FD985456       --> GATTCCCTTCTTCTTCATTCCCTCAACGAACTCATAAGGTGTGAGGTTCC
FD553723       --> ..................................................
EX893138       --> ..................................................

               651    -    701
UN21150        --> TGTCACAAGCGTCCTTGAAGTACCTAGCAGCGTCATCAATGGC--CACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965464       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY929747       <-- ..................................................  Raphanus sativus var. oleiformis
FD557664       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD937893       <-- TGTCACAAGCGTCCTTGAAGTACCTAGCAGCGTCATCAATGGC--CACCG  Raphanus sativus var. oleiformis
FD561621       <-- TGTCACAAGCGTCCTTGAAGTACCTAGCAGCGTCATCAATGGC--CACCG  Raphanus sativus var. oleiformis
FD553019       --> TGTCACAAGCGTCCTTGAAGTATCTAGC......................  Raphanus raphanistrum subsp. landra
EY926102       --> ..................................................  Raphanus sativus var. oleiformis
FD552762       --> TGTCACAAGCGTCCTTGAAGTATCTAGCAGCGTCATCAATGGCACCACCG  Raphanus raphanistrum subsp. landra
FD565735       --> TGTCACAAGCGTCCTTGAAGTACCTAGCAGCGTCATCAATGGC--CACCG  Raphanus sativus var. oleiformis
FD934417       --> TGTCACAAGCGTCCTTGAAGTACCTAGCAGCGTCATCAATGGC--CACCG  Raphanus sativus var. oleiformis
FD985456       --> TGTCACAAGCGTCATTGAAGTATCTAGCAGCGTCATCAATGGCACCACCG  Raphanus raphanistrum subsp. landra
FD553723       --> ..................................................  Raphanus raphanistrum subsp. landra
EX893138       --> ..................................................  Raphanus sativus var. oleiformis

               701    -    751
UN21150        --> AATCTAGGGCCAATGGTTAATAAACCAGAGACAAGACTTGAGACAAGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965464       <-- ..................................................
EY929747       <-- ..................................................
FD557664       <-- ..................................................
FD937893       <-- AATCTAGGGCCAATGGTTAATAAACCAGAGACAAGACTTGAGACAAGGTC
FD561621       <-- AATCTAGGGCCAATGGTTAATAAACCAGAGACAAGACTTGAGACAAGGTC
FD553019       --> ..................................................
EY926102       --> ..................................................
FD552762       --> AATCTAGGGCCAATGGTTAATAAACCTGAGACAAGACTTGAGA.......
FD565735       --> AATCTAGGGCCAATGGTTAATAAACCAGAGACAAGACTTGAGACAAGGTC
FD934417       --> AATCTAGGGCCAATGGTTAATAAACCAGAGACAAGACTTGAGA.......
FD985456       --> AATCTAGGGCCAATGGTTAATAAACCTGAGACAAGACTTGAGACA-GGTC
FD553723       --> ..................................................
EX893138       --> ..................................................

               751    -    801
UN21150        --> TTTGCCTGCTCTTGCTGTCACAATGGTGTTGTGAGCTCCCGAGACGCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965464       <-- ..................................................
EY929747       <-- ..................................................
FD557664       <-- ..................................................
FD937893       <-- TTTGCCTGCTCTTGCTGTCACAATGGTGTTGTGAGCTCCCGAGACGCATG
FD561621       <-- TTTGCCTGCTCTTGCTGTCACAATGGTGTTGTGAGCTCCCGAGACGCATG
FD553019       --> ..................................................
EY926102       --> ..................................................
FD552762       --> ..................................................
FD565735       --> TTTGCCTGCTCTTGCTGTCACAATGGTGTTGTGAGCTCCCGAGACGCATG
FD934417       --> ..................................................
FD985456       --> TTTGCCTGCTCTTGCTGTCACAATGGTGTTGTGAGCGCCCGAGACGCATG
FD553723       --> ..................................................
EX893138       --> ..................................................

               801    -    851
UN21150        --> GACCATGATCAGCACACAGCATTATGCACATCTCAATGAATTTTGTACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965464       <-- ..................................................
EY929747       <-- ..................................................
FD557664       <-- ..................................................
FD937893       <-- GACCATGATCAGCACACAGCATTATGCACATCTCAATGAATTTTGTACAG
FD561621       <-- GACCATGATCAGCACACAGCATTATGCACATCTCAATGAATTTTGTACAG
FD553019       --> ..................................................
EY926102       --> ..................................................
FD552762       --> ..................................................
FD565735       --> GACCATGATCAGCACACAGCATTATGCACATCTCAATGA-TTTTGTACAG
FD934417       --> ..................................................
FD985456       --> GACCATGATCAGCACACAGCATTATGCACATCTCA-TG-ATTTTGTACAG
FD553723       --> ..................................................
EX893138       --> ..................................................

               851    -    901
UN21150        --> TAACGAGGAAGGCTACGTTTGAACCATAGAAGGGAAATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965464       <-- ........................................
EY929747       <-- ........................................
FD557664       <-- ........................................
FD937893       <-- TAACGAGGAAGGCTACGTTTGAACCATAGAAGGGAAATGC
FD561621       <-- TAACGAGGAAGGCTACGTTTGAACCATAGAAGGGAAATGC
FD553019       --> ........................................
EY926102       --> ........................................
FD552762       --> ........................................
FD565735       --> TAcg....................................
FD934417       --> ........................................
FD985456       --> TAcga...................................
FD553723       --> ........................................
EX893138       --> ........................................