RadishBase

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Alignment for radish unigene UN21231

               1      -     51
UN21231        --> GCTTCTTTATAAAAAAATCATCCTTTTGTATTCAGTTGTTAAAATATTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- ..................................................
EV548832       <-- ..................................................
FY443649       <-- ..................................................
FD945911       <-- ..................................................
EV550449       <-- ..................................................
FD561727       <-- ..................................................
EV524855       <-- ..................................................
EV568523       <-- ..................................................
FD532959       <-- ..................................................
FD949834       <-- ..................................................
FD963082       <-- ..................................................
FD536566       <-- ..................................................
FD948888       <-- ..................................................
FD963076       <-- ..................................................
EY939568       <-- ..................................................
FD959488       --> GCTTCTTTATAAAAAAATCATCCTTTTGTATTCAGTTGTTAAAATATTTC
FD531998       --> ..........AAAAAAATCATCCTTTTGTATTCAGTTGTTAAAATATTTC
EV545746       --> .................................................C
EV544435       --> ..................................................
EV529753       --> ..................................................
FD942121       --> ..................................................
FD945431       --> ..................................................
FD529283       --> ..................................................

               51     -    101
UN21231        --> TAATCATAAATCAAAAGAGAACATAATTAATATTACAATTTCATGACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- ..................................................
EV548832       <-- ..................................................
FY443649       <-- ..................................................
FD945911       <-- ..................................................
EV550449       <-- ..................................................
FD561727       <-- ..................................................
EV524855       <-- ..................................................
EV568523       <-- ..................................................
FD532959       <-- ..................................................
FD949834       <-- ..................................................
FD963082       <-- ..................................................
FD536566       <-- ..................................................
FD948888       <-- ..................................................
FD963076       <-- ..................................................
EY939568       <-- ..................................................
FD959488       --> TAATCATAAATCAAAAGAGAACATAATTAATATTACAATTTCATGACAAC
FD531998       --> TAATCATAAATCAAAAGAGAACATAATTAATATTACAATTTCATGACAAC
EV545746       --> TAATCATAAATCAAAAGAGAACATAATTAATATTACAATTTCATGACAAC
EV544435       --> ..ATCATAAATCAAAAGAGAACATAATTAATATTACAATTTCATGACAAC
EV529753       --> ...........CAAAAGAGAACATAATCAATATTACAATTTCATGACAAC
FD942121       --> ...........CAAAAGAGAACATAATTAATATTACAATTTCATGACAAC
FD945431       --> ..............................TATTACAATTTCATGACAAC
FD529283       --> ..................................ACAATTTCATGACAAC

               101    -    151
UN21231        --> ATTCATATTGATAATGATCAAATACAGATAAGATAGAATAATTTCATTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- ..................................................
EV548832       <-- ..................................................
FY443649       <-- ..................................................
FD945911       <-- ..................................................
EV550449       <-- ..................................................
FD561727       <-- ..................................................
EV524855       <-- ..................................................
EV568523       <-- ..................................................
FD532959       <-- ..................................................
FD949834       <-- ..................................................
FD963082       <-- ..................................................
FD536566       <-- ..................................................
FD948888       <-- ..................................................
FD963076       <-- ..................................................
EY939568       <-- ..................................................
FD959488       --> ATTCATATTGATAATGATCAAATACAGATAAGATAGAATAATTTCATTAT
FD531998       --> ATTCATATTGATAATGATCAAATACAGATAAAATAGAATAATTTCATTAT
EV545746       --> ATTCATATTGATAATGATCAAATACAGATAAGATAGAATAATTTCATTAT
EV544435       --> ATTCATATTGATAATGATCAAATACAGATAAGGTAGAATAATTTCATTAT
EV529753       --> ATTCATATTGATAATGATCAAATACAGATAAGATAGAATAATTTCATTAT
FD942121       --> ATTCATATTGATAATGATCAAATACAGATAAGATAGAATAATTTCATTAT
FD945431       --> ATTCATATTGATAATGATCAAATACAGATAAGATAGAATAATTTCATTAT
FD529283       --> ATTCATATTGATAATGATCAAATACAGATAAGATAGAATAATTTCATTAT

               151    -    201
UN21231        --> TTAGTTTTGGTGGGGAAAGAAGCCATCTTATTGATTCCACAGAGACCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- ...............................TGATTCCACAGAGACCCTC
EV548832       <-- ..................................................
FY443649       <-- ..................................................
FD945911       <-- ..................................................
EV550449       <-- ..................................................
FD561727       <-- ..................................................
EV524855       <-- ..................................................
EV568523       <-- ..................................................
FD532959       <-- ..................................................
FD949834       <-- ..................................................
FD963082       <-- ..................................................
FD536566       <-- ..................................................
FD948888       <-- ..................................................
FD963076       <-- ..................................................
EY939568       <-- ..................................................
FD959488       --> TTAGTTTTGGTGGGGAAAGAAGCCATCTTATTGATTCCACAGAGACCCTC
FD531998       --> TTAGTTTTGATGGGGAAAGAAGCCATCTTATTGATTCCACAGAGACTCTC
EV545746       --> TTAGTTTTGGTGGGGAAAGAAGCCATCTTATTGATTCCACAGAGACCCTC
EV544435       --> TTAGTTTTGGTGGGGAAAGAAGCCATCTTATTGATTCCACAGAGACCCTC
EV529753       --> TTAGTTTTGGTGGGGAAAGAAGCCATCTTATTGATTCCACAGAGACCCTC
FD942121       --> TTAGTTTTGGTGGGGAAAGAAGCCATCTTATTGATTCCACAGAGACCCTC
FD945431       --> TTAGTTTTGGTGGGGAAAGAAGCCATCTTATTGATTCCACAGAGACCCTC
FD529283       --> TTAGTTTTGGTGGGGAAAGAAGCCATCTTATTGATTCCACAGAGACCCTC

               201    -    251
UN21231        --> TGGTTTTCCAGTGTTCCTCTTCATCCTAATGTAACCTTTCTCTCCCCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- TGGTTTTCCAGTGTTCCTCTTCATCCTAATGTAACCTTTCTCTCCCCATG
EV548832       <-- ......................................TCTCTCCCCATG
FY443649       <-- ..................................................
FD945911       <-- ..................................................
EV550449       <-- ..................................................
FD561727       <-- ..................................................
EV524855       <-- ..................................................
EV568523       <-- ..................................................
FD532959       <-- ..................................................
FD949834       <-- ..................................................
FD963082       <-- ..................................................
FD536566       <-- ..................................................
FD948888       <-- ..................................................
FD963076       <-- ..................................................
EY939568       <-- ..................................................
FD959488       --> TGGTTTTCCAGTGTTCCTCTTCATCCTAATGTAACCTTTCTCTCCCCATG
FD531998       --> TGGTTTTCCAGTGTTCCTCTTCATCCTAATGTAACCTTTCTCTCCCCATG
EV545746       --> TGGTTTTCCAGTGTTCCTCTTCATCCTAATGTAACCTTTCTCTCCCCATG
EV544435       --> TGGTTTTCCAGTGTTCCTCTTCATCCTAATGTAACCTTTCTCTCCCCATG
EV529753       --> TGGTTTTCCAGTGTTCCTCTTCATCCTAATGTAACCTTTCTCTCCCCATG
FD942121       --> TGGTTTTCCAGTGTTCCTCTTCATCCTAATGTAACCTTTCTCTCCCCATG
FD945431       --> TGGTTTTCCAGTGTTCCTCTTCATCCTAATGTAACCTTTCTCTCCCCATG
FD529283       --> TGGTTTTCCAGTGTTCCTCTTCATCCTAATGTAACCTTTCTCTCCCCATG

               251    -    301
UN21231        --> TTGGTCCCCAAGAATTCTTCACAATGATGTAATCCGAACCCTTGCTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- TTGGTCCCCAAGAATTCTTCACAATGATGTAATCCGAACCCTTGCTTGAT
EV548832       <-- TTGGTCCCCAAGAATTCTTCACAATGATGTAATCCGAACCCTTGCTTGAT
FY443649       <-- ..................................................
FD945911       <-- ..................................................
EV550449       <-- ..................................................
FD561727       <-- ..................................................
EV524855       <-- ..................................................
EV568523       <-- ..................................................
FD532959       <-- ..................................................
FD949834       <-- ..................................................
FD963082       <-- ..................................................
FD536566       <-- ..................................................
FD948888       <-- ..................................................
FD963076       <-- ..................................................
EY939568       <-- ..................................................
FD959488       --> TTGGTCCCCAAGAATTCTTCACAATGATGTAATCCGAACCCTTGCTTGAT
FD531998       --> TTGGTCCCCAAGAATTCTTCACAATGATGTAATCCGAACCCTTGCTTGAT
EV545746       --> TTGGTCCCCAAGAATTCTTCACAATGATGTAATCCGAACCCTTGTTTGAT
EV544435       --> TTGGTCCCCAAGAATTCTTCACAATGATGTAATCCGAACCCTTGCTTGAT
EV529753       --> TTGGTCCCCAAGAATTCTTCACAATGATGTAATCCGAACCCTTGCTT--T
FD942121       --> TTGGTCCCCAAGAATTCTTCACAATGATGTAATCCGAACCCTTGCTTGAT
FD945431       --> TTGGTCCCCAAGAATTCTTCACAATGATGTAATCCGAACCCTTGCTTGAT
FD529283       --> TTGGTCCCCAAGAATTCTTCACAATGATGTAATCCGAACCCTTGCTTGAT

               301    -    351
UN21231        --> CCGTACCCAACCGCAGCCACACCGTGGTCCAAATCGACCCCGCACCGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- CCGTACCCAACCGCAGCCACACCGTGGTCCAAATCGACCCCGCACCGTCC
EV548832       <-- CCGTACCCAACCGCAGCCACACCGTGGTCCAAATCGACCCCGCACCGTCC
FY443649       <-- ..................................................
FD945911       <-- ..................................................
EV550449       <-- ..................................................
FD561727       <-- ..................................................
EV524855       <-- ..................................................
EV568523       <-- ..................................................
FD532959       <-- ..................................................
FD949834       <-- ..................................................
FD963082       <-- ..................................................
FD536566       <-- ..................................................
FD948888       <-- ..................................................
FD963076       <-- ..................................................
EY939568       <-- ..................................................
FD959488       --> CCGTACCCAACCGCAGCCACACCGTGGTCCAAATCGACCCCGCACCGTCC
FD531998       --> CCGTACCCAACCGCAGCCACACCGTGGTCCAAATCGACCCCGCACCGTCC
EV545746       --> CCGTACCCAACCGCAGCCACACCGTGGTCCAAATCGACCCCGCACCGTCC
EV544435       --> CCGTACCCAACCGCAGCCACACCGTGGTCCAAATCGACCCCGCACCGTCC
EV529753       --> CCGTACCCAACCGCAGCCACACCGTGGTCCAAATCGACCCCGCACCGTCC
FD942121       --> CCGCACCCAACCGCAGCCACACCGTGGTCCAAATCGACCCCGCACCGTCC
FD945431       --> CCGTACCCAACCGCAGCCACACCGTGGTCCAAATCGACCCCGCACCGTCC
FD529283       --> CCGTACCCAACCGCAGCCACACCGTAGTCCAAATCGACCCCGCACCGTCC

               351    -    401
UN21231        --> ATCAAAGACACCACCACTATAGAACTGGAACTCTCTACCAGAAGCATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- ATCAAAGACACCACCACTATGGAACTGGAACTCTCTACCAGAAGCATCAA  Raphanus raphanistrum subsp. maritimus
EV548832       <-- ATCAAAGACACCACCACTATAGAACTGGAACTCTCTACCAGAAGCATCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443649       <-- ................CTATAGAACTGGAACTCTCTACCAGAGGCATCAA  Raphanus sativus cv GSK3-1
FD945911       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV550449       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561727       <-- ..................................................  Raphanus sativus var. oleiformis
EV524855       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV568523       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD532959       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD949834       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD963082       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD536566       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD948888       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD963076       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY939568       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD959488       --> ATCAAAGACACCACCACTATAGAACTGGAACTCTCTACCAGAAGCATCAA  Raphanus raphanistrum subsp. maritimus
FD531998       --> ATCAAAGACACCACCACTATAGAACTGGAACTCTCTACCAAAGGCATCAA  Raphanus raphanistrum subsp. maritimus
EV545746       --> ATCAAAGACACCACCACTATAGAACTGGAACTCTCTACCAGAAGCATCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544435       --> ATCAAAGACACCACCACTATAGAACTGGAACTCTCTACCAGAAGCATCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV529753       --> ATCAAAGACACCACCACTATAGAACTGGAACTCTCTACCAGAGGCATCAA  Raphanus raphanistrum subsp. maritimus
FD942121       --> ATCAAAGACACCACCACTATAGAACTGGAACTCTCTACCAGAGGCATCAG  Raphanus sativus cv Early Scarlet Globe
FD945431       --> ATCAAAGACACCACCACTATAGAACTGGAACTCTCTACCAGAGGCATCAA  Raphanus sativus cv Early Scarlet Globe
FD529283       --> ATCAAAGACACCACCACTATAGAACTGGAACTCTCTACCAGAAGCATCAA  Raphanus raphanistrum subsp. maritimus

               401    -    451
UN21231        --> TGGCGACACTGAGAGGTTGATGAGCCAATGCCTTCAAGAGACTTTTCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- TGGCGACACTAAGAGGTTGATGAGCCAATGCCTTCAAGAGACTTTTCTCA  Raphanus raphanistrum subsp. maritimus
EV548832       <-- TGGCGACACTAAGAGGTTGATGAGCCAATGCCTTCAAGAGACTTTTCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443649       <-- TAGCAACACTGAGAGGTTGATGAGCCAATGCCTTCAAGAGACTTTTCTCA  Raphanus sativus cv GSK3-1
FD945911       <-- ....aACACTGAGAGGTTGATGAGCCAATGC-TTCAAGAGACTTTTCTCA  Raphanus sativus cv Early Scarlet Globe
EV550449       <-- ...................................AAGAGACTTT-CTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561727       <-- ....................................AGAGACTTT-CTCA  Raphanus sativus var. oleiformis
EV524855       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV568523       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD532959       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD949834       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD963082       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD536566       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD948888       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD963076       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY939568       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD959488       --> TGGCGACACTAAGAGGTTGATGAGCCAATGCCTTCAAGAGACTTTTCTCA  Raphanus raphanistrum subsp. maritimus
FD531998       --> TAGCAACACTGAGAGGTTGATGAGCCAATGCCTTCAAGAAACTTTTCTCA  Raphanus raphanistrum subsp. maritimus
EV545746       --> TGGCGACACTAAGAGGTTGATGAGCCAATGCCTTCAAGAGACTTTTCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544435       --> TGGCGACACTAAGAGGTTGATGAGCCAATGCCTTCAAGAGACTTTTCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV529753       --> TAGCAACACTGAGAGGTTGATGAGCCAATGCCTTCAAGAGACTTTTCTCA  Raphanus raphanistrum subsp. maritimus
FD942121       --> TAGCAACACTGAGAGGTTGATGAGCCAATGCCTTCAAGAAACTTTTCTCA  Raphanus sativus cv Early Scarlet Globe
FD945431       --> TAGCAACACTGAGAGGTTGATGAGCCAATGCCTTCAAGAGACTTTTCTCA  Raphanus sativus cv Early Scarlet Globe
FD529283       --> TGGCGACACTAAGAGGTTGATGAGCCAATGCCTTCAAGAGACTTTTCTCA  Raphanus raphanistrum subsp. maritimus

               451    -    501
UN21231        --> TCGTTCCTAGGTACATCTTGGTGCCCACTGATAGTCACCATTTCAGATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- TCGTTCCTAGGTACATCTTGGTGCCCACTGATAGTCACCATTTCAGATTC
EV548832       <-- TCGTTCCTAGGTACATCTTGGTGCCCACTGATAGTCACCATTTCAGATTC
FY443649       <-- TCGTTCCTAGGTACATCTTGGTGCCCACTGATAGTCACCATTTCAGATTC
FD945911       <-- TCGT-CCTAGGTACATCTTGGTGCCCACTGATAGTCACCATT-CAGATTC
EV550449       <-- TCGT-CCTAGGTACATCTTGGTGCCCACTGATAGTCACCATTTCAGATTC
FD561727       <-- TCGT-CCTAGGTACATCTTGGTGCCCACTGATAGTCACCATTTCAGATTC
EV524855       <-- ..................................................
EV568523       <-- ..................................................
FD532959       <-- ..................................................
FD949834       <-- ..................................................
FD963082       <-- ..................................................
FD536566       <-- ..................................................
FD948888       <-- ..................................................
FD963076       <-- ..................................................
EY939568       <-- ..................................................
FD959488       --> TCGTTCCTAGGTACATCTTGGTGCCCACTGATAGTCACCATTTCAGATTC
FD531998       --> TCGTTCCTAGGTACATCTTGGTGCCCACTGATAGTCACCATTTCAGATTC
EV545746       --> TCGTTCCTAGGTACATCTTGGTGCCCACTGATAGTCACCATTTCAGATTC
EV544435       --> TCGTTCCTAGGTACATCTTGGTGCCCACTGATAGTCACCATTTCAGATTC
EV529753       --> TCGTTCCTAGGTAAATCTTGGTGCCCACTGATAGTCACCATTTCAAATTC
FD942121       --> TCGTTCCTAGGTACATCTTGGTGCCCACTGATAGTCACCATTTCAAATTC
FD945431       --> TCGTTCCTAGGTACATCTTGGTGCCCACTGATAGTCACCATTTCAGATTC
FD529283       --> TCGTTCCTAGGTACATCTTGGTGCCCACTGATAGTCACCATTTCAGATTC

               501    -    551
UN21231        --> ATCCTTTTGCGTCTCGCAAGTTCCTTCTTCCATGGAGTAAGGATAATCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- ATCCTTTTGCGTCTCGCAAGTTCCTTCTTCCATGGGGTAAGGATAATCCT
EV548832       <-- ATCCTTTTGCGTCTCGCAAGTTCCTTCTTCCATGGAGTAAGGATAATCCT
FY443649       <-- ATCCTTTTGCGTCTCGCAAGTTCCTTCTTCCATGGAGTAAGGATAATCCT
FD945911       <-- ATC-TTTTGCGTCTCGCAAGTTC-TTCTTCCATGGAGTAAGGATAATCCT
EV550449       <-- ATCCTTTTGCGTCTCGCAAGTTCCTTCTTCCATGGAGTAAGGATAGTCCT
FD561727       <-- ATC-TTTTGCGTCTCGCAAGT-CCTTCTTCCATGGAGTAAGGATAATCCT
EV524855       <-- .....TTTGCGTCTCGCAAGTTCCTTCTTCCATGGAGTAAGGATAATCCT
EV568523       <-- ..........................CTTCCATGGAGTAAGGATAATCCT
FD532959       <-- ..................................................
FD949834       <-- ..................................................
FD963082       <-- ..................................................
FD536566       <-- ..................................................
FD948888       <-- ..................................................
FD963076       <-- ..................................................
EY939568       <-- ..................................................
FD959488       --> ATCCTTTTGCGTCTCGCAAGTTCCTTCCTCCATGGAGTAAGGATAATCCT
FD531998       --> ATCCTTTTGCGTCTCGCAAGTTCCTTCTTCCATGGAGTAAGGATAATCCT
EV545746       --> ATCCTTTTGCGTCTCGCAAGTTCCTTCTTCCATGGAGTAAGGATAGTCCT
EV544435       --> ATCCTTTTGCGTCTCGCAAGTTCCTTCTTCCATGGAGTAAGGATAATCCT
EV529753       --> ATCCTTTTGCGTCTCGCAAGTTCCTTCTTCCATGGAGTAAGGATAATCCT
FD942121       --> ATCCTTTTGCGTCTCGCAAGTTCCTTCTTCCATGGAGTAAGGATAATCCT
FD945431       --> ATCCTTTTGCGTCTCGCAAGTTCCTTCTTCCATGGAGTAAGGATAATCCT
FD529283       --> ATCCTTTTGCGTCTCGCAAGTTCCTTCTTCCATGGAGTAAGGATAATCCT

               551    -    601
UN21231        --> CTTCCTTGCGAAGGCCTCCGTTCTTGACAATGTACTCAAAAGCATAGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- CTTCCTTGCGAAGGCCTCCGTTCTTGACAATGTACTCAAAAGCATAGTCC
EV548832       <-- CTTCCTTGCGAAGGCCTCCGTTCTTGACAATGTACTCAAAAGCATAGTCC
FY443649       <-- CTTCCTTGCGAAGGCCTCCGTTCTTGACAATGTACTCAAAAGCATAGTCC
FD945911       <-- CTTCCTTGCGAAGGC-TCCGTTCTTGACAATGTACTCAAAAGCATAGTCC
EV550449       <-- CTTCCTTGCGAAGGCCTCCGTTCTTGACAATGTACTCAAAAGCATAGTCC
FD561727       <-- CTTCCTTGCGAAGGCCTCCGTTCTTGACAATGTACTCAAAAGCATAGTCC
EV524855       <-- CTTCCTTGCGAAGGCCTCCGTTCTTGACAATGTACTCAAAAGCATAGTCC
EV568523       <-- CTTCCTTGCGAAGGCCTCCGTTCTTGACAATGTACTCAAAAGCATAGTCC
FD532959       <-- ..........AAGGC-TCCGTTCTTGACAATGTACTCAAAAGCATAGTCC
FD949834       <-- ...................................TCAAAAGCATAGTCC
FD963082       <-- ..................................................
FD536566       <-- ..................................................
FD948888       <-- ..................................................
FD963076       <-- ..................................................
EY939568       <-- ..................................................
FD959488       --> CTTCCTTGCGAAGGCCTCCGTTCTTGACAATGTACTCAAAAGCATAGTCC
FD531998       --> CTTCCTTGCGAAGGCCTCCGTTCTCGACAATATACTCAAAAGCATAGTCC
EV545746       --> CTTCCTTGCGAAGGCCTCCGTTCTTGACAATGTACTCAAAAGCATAGTCC
EV544435       --> CTTCCTTGCGAAGGCCTCCGTTCTTGACAATGTACTCAAAAGCATAGTCC
EV529753       --> CTTCCTTGCGAAGGCCTCCGTTCTTGACAATGTACTCAAAAGCATAGTCC
FD942121       --> CTTCCTTGCGAAGGCCTCCGTTCTTGACAATGTACTCAAAAGCATAGTCC
FD945431       --> CTTCCTTGCGAAGGCCTCCGTTCTTGACAATGTACTCAAAAGCATAGTCC
FD529283       --> CTTCCTTGCGAAGGCCTCCGTTCTTGACAATGTACTCAAAAGCATAGTCC

               601    -    651
UN21231        --> ATGAGACCACCGTTGCACCCATTGTTGTAAGTTGTGTCACAGTCTATGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- ATGAGACCACCGTTGCACCCATTGTTGTAAGTTGTGTCACAGTCTATGAG  Raphanus raphanistrum subsp. maritimus
EV548832       <-- ATGAGACCACCGTTGCACCCATTGTTGTAAGTTGTGTCACAGTCTATGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443649       <-- ATGAGACCACCGTTGCACCCATTGTTGTAAGTTGTGTCACAATCTATGAG  Raphanus sativus cv GSK3-1
FD945911       <-- ATGAGACCACCGTTGCACCCATTGTTGTAAGTTGTGTCACAATCTATGAG  Raphanus sativus cv Early Scarlet Globe
EV550449       <-- ATGAGACCACCGTTGCACCCATTGTTGTAAGTTGTGTCACAGTCTATGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561727       <-- ATGAGACCACCGTTGCACCCATTGTTGTAAGTTGTGTCACAATCTATGAG  Raphanus sativus var. oleiformis
EV524855       <-- ATGAGACCACCGTTGCACCCATTGTTGTAAGTTGTGTCACAATCTATGAG  Raphanus raphanistrum subsp. maritimus
EV568523       <-- ATGAGACCACCGTTGCACCCATTGTTGTAAGTTGTGTCACAGTCTATGAG  Raphanus raphanistrum subsp. landra
FD532959       <-- ATGAGACCACCGTTGCACCCATTGTTGTAAGTTGTGTCACAGTCTATGAG  Raphanus raphanistrum subsp. maritimus
FD949834       <-- ATGAGACCACCGTTGCACCCATTGTTGTAAGTTGTGTCACAATCTATGAG  Raphanus sativus cv Early Scarlet Globe
FD963082       <-- ...............gcaCCATTGTTGTAAGTTGTGTCACAGTCTATGAG  Raphanus raphanistrum subsp. maritimus
FD536566       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD948888       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD963076       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY939568       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD959488       --> ATGAGACCACCGTTGCACC-ATTGTTGTAAGTTGTGTCACAGTCTATGAG  Raphanus raphanistrum subsp. maritimus
FD531998       --> ATGAGACCACCGTTGCACCCATTGTTGTAAGTTGTGTCACAGTCTATGAG  Raphanus raphanistrum subsp. maritimus
EV545746       --> ATGAGACCACCGTTGCACCCATTGTTGTAAGTTGTGTCACAGTCTATGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544435       --> ATGAGACCACCGTTGCACCCATTGTTGTAAGTTGTGTCACAGTCTATGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV529753       --> ATGAGACCACCGTTGCACCCATTGTTGTAAGTTGTGTCACAATCTATGAG  Raphanus raphanistrum subsp. maritimus
FD942121       --> ATGAGACCACCGTTGCACCCATTGTTGTAAGTTGTGTCACAATCTATGAG  Raphanus sativus cv Early Scarlet Globe
FD945431       --> ATGAGACCACCGTTGCACCCATTGTTGTAAGTTGTGTCACAATCTATGAG  Raphanus sativus cv Early Scarlet Globe
FD529283       --> ATGAGACCACCGTTGCACCCATTGTTGTAAGTTGTGTCACAGTCTATGAG  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN21231        --> TTCTTGTTCAGACAATGTTGTCAAGTTTCCTGTCACAATCTTGTTTATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- TTCTTGTTCAGACAATGTTGTCAAGTTTCCTGTCACAATCTTGTTTATAC  Raphanus raphanistrum subsp. maritimus
EV548832       <-- TTCTTGTTCAGACAATGTTGTCAAGTTTCCTGTCACAATCTTGTTTATAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443649       <-- TTCTTGTTCAGATAGTGTTGTCAAGTTTCCCGTCACAATCTTGTTTATAC  Raphanus sativus cv GSK3-1
FD945911       <-- TTCTTGTTCAGATAGTGTTGTCAAGTTTCCCGTCACAATCTTGTTTATAC  Raphanus sativus cv Early Scarlet Globe
EV550449       <-- TTCTTGTTCAGACAATGTTGTCAAGTTTCCTGTCACAATCTTGTTTATAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561727       <-- TTCTTGTTCAGATAGTGTTGTCAAGTTTCCCGTCACAATCTTGTTTATAC  Raphanus sativus var. oleiformis
EV524855       <-- TTCTTGTTCAGATAGTGTTGTCAAGTTTCCCGTCACAATCTTGTTTATAC  Raphanus raphanistrum subsp. maritimus
EV568523       <-- TTCTTGTTCAGACAATGTTGTCGAGTTTCCTGTCACAATCTTGTTTATAC  Raphanus raphanistrum subsp. landra
FD532959       <-- TTCTTGTTCAGACAATGTTGTCAAGTTTCCTGTCACAATCTTGTTTATAC  Raphanus raphanistrum subsp. maritimus
FD949834       <-- TTCTTGTTCAGATAGTGTTGTCAAGTTTCCCGTCACAATCTTGTTTATAC  Raphanus sativus cv Early Scarlet Globe
FD963082       <-- TTCTTGTTCAGACAATGTTGTCAAGTTTCCTGTCACAATCTTGTTTATAC  Raphanus raphanistrum subsp. maritimus
FD536566       <-- ........CAGACAATGTTGTCAAGTTTCCTGTCACAATCTTGTTTATAC  Raphanus raphanistrum subsp. maritimus
FD948888       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD963076       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY939568       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD959488       --> TTCTTGTTCAGACAATGTTGTCAAGTTTCCTGTCACAATCTTGTTTATAC  Raphanus raphanistrum subsp. maritimus
FD531998       --> TTCTTGTTCAGACAATGTTGTCAAGTTTCCTGTCACAATCTTGTTTATAC  Raphanus raphanistrum subsp. maritimus
EV545746       --> TTCTTGTTCAGACAATGTTGTCAAGTTTCCTGTCACAATCTTGTTTATAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544435       --> TTCTTGTTCAGACAATGTTGTCAAGTTTCCTGTCACAATCTTGTTTATAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV529753       --> TTCTTGTTCAGATAGTGTTGTCAAGTTTCCCGTCACAATCTTGTTTATAC  Raphanus raphanistrum subsp. maritimus
FD942121       --> TTCTTGT...........................................  Raphanus sativus cv Early Scarlet Globe
FD945431       --> TTCTTGTTCAGATAGTGTTGTCAAGTTTCCCGTCACAATCTTGTTTATAC  Raphanus sativus cv Early Scarlet Globe
FD529283       --> TTCTTGTTCAGACAATGTTGTCAAGTTTCCTGTCACAATCTTGTTTATAC  Raphanus raphanistrum subsp. maritimus

               701    -    751
UN21231        --> CTTCCACTGCAGCTACTGTCGAAAACGCCCAACAACTTCCGCAAGAGCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- CTTCCACTGCAGCTACTGTCGAAAACGCCCAACAACTTCCGCAAGAGCCC  Raphanus raphanistrum subsp. maritimus
EV548832       <-- CTTCCACTGCAGCTACTGTCGAAAACGCCCAACAACTTCCGCAAGAGCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443649       <-- CTTCCACTGCAGCTACTGTCGAAAACGCCCAACAACTTCCGCAAGAGCCT  Raphanus sativus cv GSK3-1
FD945911       <-- CTTCCACTGCAGCTACTGTCGAAAACGCCCAACAACTTCCGCAAGAGCCT  Raphanus sativus cv Early Scarlet Globe
EV550449       <-- CTTCCACTGCAGCTACTGTCGAAAACGCCCAACAACTTCCGCAAGAGCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561727       <-- CTTCCACTGCAGCTACTGTCGAAAACGCCCAACAACTTCCGCAAGAGCCT  Raphanus sativus var. oleiformis
EV524855       <-- CTTCCACTGCAGCTACTGTCGAAAACGCCCAACAACTTCCGCAAGAGCCT  Raphanus raphanistrum subsp. maritimus
EV568523       <-- CTTCCACTGCAGCTACTGTCGAAAACGCCCAACAACTTCCGCAAGAGCCC  Raphanus raphanistrum subsp. landra
FD532959       <-- CTTCCACTGCAGCTACTGTCGAAAACGCCCAACAACTTCCGCAAGAGCCC  Raphanus raphanistrum subsp. maritimus
FD949834       <-- CTTCCACTGCAGCTACTGTCGAAAACGCCCAACAACTTCCGCAAGAGCCT  Raphanus sativus cv Early Scarlet Globe
FD963082       <-- CTTCCACTGCAGCTACTGTCGAAAACGCCCAACAACTTCCGCAAGAGCCC  Raphanus raphanistrum subsp. maritimus
FD536566       <-- CTTCCACTGCAGCTACTGTCGAAAACGCCCAGCAACTTCCGCAAGAGCCC  Raphanus raphanistrum subsp. maritimus
FD948888       <-- ...CCACTGCAGCTACTGTCGAAAACGCCCAACAACTTCCGCAAGAGCCT  Raphanus sativus cv Early Scarlet Globe
FD963076       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY939568       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD959488       --> CTTCCACTGCAGCTACTGTCGAAAACGCCCAACAACTTCCGCAAGAGCCC  Raphanus raphanistrum subsp. maritimus
FD531998       --> CTTCCACTGCAGCTACTG................................  Raphanus raphanistrum subsp. maritimus
EV545746       --> CTTCCACTGCAGCTACTGTCGAAAACGCCCAACAACTTCCGCAAGAGCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544435       --> CTTCCACTGCAGCTACTGTCGAAAACGCCCAACAACTTCCGCAAGAGCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV529753       --> CTTCCACTGCAGCTACTGTCGAAAACGCCCAACAACTTCCGCAAGAGCCT  Raphanus raphanistrum subsp. maritimus
FD942121       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD945431       --> CTTCCACTGCAGCTACTGTCGAAAACGCCCAACAACTTCCGCAAGAGCCT  Raphanus sativus cv Early Scarlet Globe
FD529283       --> CTTCCACTGCAGCTACTGTCGAAAACGCCCAACAACTTCCGCAAGAGCCC  Raphanus raphanistrum subsp. maritimus

               751    -    801
UN21231        --> TGGTTCTTGACGTAGCTCACGGCTCCTTTCTTTCTCCAGTCAACAGATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- TGGTTCTTGACGTAGCTCACGGCTCCc.......................
EV548832       <-- TGGTTCTTGACGTAGCTCACGGCTCCTTTCTTTCTCCAGTCAACAGATTT
FY443649       <-- TGGTTCTTGACGTAGCTCACGGCTCCTTTCTTTCTCCAGTCAACAGATTT
FD945911       <-- TGGTTCTTGACGTAGCTCACGGCTCCTTTCTTTCTCCAGTCAACAGATTT
EV550449       <-- TGGTTCTTGACGTAGCTCACGGCTCCTTTCTTTCTCCAGTCAACAGATTT
FD561727       <-- TGGTTCTTGACGTAGCTCACGGCTCCTTTCTTTCTCCAGTCAACAGATTT
EV524855       <-- TGGTTCTTGACGTAGCTCACGGCTCCTTTCTTTCTCCAGTCAACAGATTT
EV568523       <-- TGGTTCTTGACGTAGCTCACGGCTCCTTTCTTTATCCAGTCAACAGATTT
FD532959       <-- TGGTTCTTGACGTAGCTCACGGCTCCTTTCTTTCTCCAGTCAACAGATTT
FD949834       <-- TGGTTCTTGACGTAGCTCACGGCTCCTTTCTTTCTCCAGTCAACAGATTT
FD963082       <-- TGGTTCTTGACGTAGCTCACGGCTCCTTTCTTTCTCCAGTCAACAGATTT
FD536566       <-- TGGTTCTTGACGTAGCTCACGGCTCCTTTCTTTCTCCAGTCAACAGATTT
FD948888       <-- TGGTTCTTGACGTAGCTCACGGCTCCTTT-TTTCTCCAGTCAACAGATTT
FD963076       <-- ..................................................
EY939568       <-- ..................................................
FD959488       --> TGGTTCTTGA........................................
FD531998       --> ..................................................
EV545746       --> TGGTTCTTGACGTAGCTCACGGCTCCTTTCTTTCTCCAGTCAACAGATTT
EV544435       --> TGGTTCTTGACGTAGCTCACGGCTCCTTTCTTTCTCCAGTCAACAGATTT
EV529753       --> TGGTTCTTGACGTAGCTCACGGCTCCTTTCTTTCTCCAGTCAACAGATTT
FD942121       --> ..................................................
FD945431       --> TGGTTCTTGACGTAGCTCACGGCTCCTTTCTTTCTCCAGTCAACAGATTT
FD529283       --> TGGTTCTTGACGTAGCTCACGGCTCCTTTCTTTC................

               801    -    851
UN21231        --> AGGCAAAGCCTCAACGTCAACGTTCTTATAAGAGAACTCTTGGTAAGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- ..................................................
EV548832       <-- AGGCAAAGCCTCAACGTCAACGTTCTTATAAGAGAACTCTTGGTAAGATC
FY443649       <-- AGGCAAAGCCTCAACGTCAACGTTCTTATAAGAGAACTCTTGGTAAGATC
FD945911       <-- AGGCAAAGCCTCAACGTCAACGTTCTTATAAGAGAACTCTTGGTAAGATC
EV550449       <-- AGGCAAAGCCTCAACGTCAACGTTCTTATAAGAGAACTCTTGGTAAGATC
FD561727       <-- AGGCAAAGCCTCAACGTCAACGTTCTTATAAGAGAACTCTTGGTAAGATC
EV524855       <-- AGGCAAAGCCTCAACGTCAACGTTCTTATAAGAGAACTCTTGGTAAGATC
EV568523       <-- AGGCAAAGCCTCAACGTCAACGTTCTTATAAGAGAACTCTTGGTAAGATC
FD532959       <-- AGGCAAAGCCTCAACGTCAACGTTCTTATAAGAGAACTCTTGGTAGGATC
FD949834       <-- AGGCAAAGCCTCAACGTCAACGTTCTTATAAGAGAACTCTTGGTAAGATC
FD963082       <-- AGGCAAAGCCTCAACGTCAACGTTCTTATAAGAGAACTCTTGGTAAGATC
FD536566       <-- AGGCAAAGCCTCAAAGTCAACGTTCTTATAGGAGAACTCTTGGTAAGATC
FD948888       <-- AGGCAAAGCCTCAACGTCAACGTTCTTATAAGAGAACTCTTGGTAAGATC
FD963076       <-- ..................................................
EY939568       <-- ..................................................
FD959488       --> ..................................................
FD531998       --> ..................................................
EV545746       --> AGGCAAAGCCTCAACGTCAACGTTCTTATAAGAGAACTCTTGGTAAGATC
EV544435       --> AGGCAAAGCCTCAACGTCAACGTTCTTATAAGAGAACTCTTGGTAAGATC
EV529753       --> AGGCAAAGCCTCAACGTCAACGTTCTTATAAGAGAACTCTTGGTAAGATC
FD942121       --> ..................................................
FD945431       --> AGGCAAAGCCTCAACGTCAACG............................
FD529283       --> ..................................................

               851    -    901
UN21231        --> TTTCATCTTGGCGTCTCGCTATATCAGTCTTGAGCCCTAAGTACTTGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- ..................................................
EV548832       <-- TTTCATCTTGGCGTCTCGCTATATCAGTCTTGAGCCCTAAGTACTTGTTC
FY443649       <-- TTTCATCTTGGCGTCTCGCTATATCAGTCTTGAGCCCTAAGTACTTGTTC
FD945911       <-- TTTCATCTTGGCGTCTCGCTATATCAGTCTTGAGCCCTAAGTACTTGTTC
EV550449       <-- TTTCATCTTGGCGTCTCGCTATATCAGTCTTGAGCCCTAAGTACTTGTTC
FD561727       <-- TTTCATCTTGGCGTCTCGCTATATCAGTCTTGAGCCCTAAGTACTTGTTC
EV524855       <-- TTTCATCTTGGCGTCTCGCTATATCAGTCTTGAGCCCTAAGTACTTGTTC
EV568523       <-- TTTCATCTTGGCGTCTCGCTATATCAGTCTTGAGCCCTAAGTACTTGTTC
FD532959       <-- TTTCATCTTGGCGTCTCGCTATATCAGTCTTGAGCCCTAAGTACTTGTTC
FD949834       <-- TTTCATCTTGGCGTCTCGCTATATCAGTCTTGAGCCCTAAGTACTTGTTC
FD963082       <-- TTTCATCTTGGCGTCTCGCTATATCAGTCTTGAGCCCTAAGTACTTGTTC
FD536566       <-- TTTCATCTTGGCGTCTCGCTATATCAGTCTTGAGCCCTAAGTACTTGTTC
FD948888       <-- TTTCATCTTGGCGTCTCGCTATATCAGTCTTGAGCCCTAAGTACTTGTTC
FD963076       <-- ..................................................
EY939568       <-- ..................................................
FD959488       --> ..................................................
FD531998       --> ..................................................
EV545746       --> TTTCATCTTGGCGTCTCGCTATATCAGTCT....................
EV544435       --> TTTCATCTTGGCGTCTCGCTATATCAGTCTTGAGCCCTAAGTACTTGTTC
EV529753       --> TTTCATCTTGGCGTCTCGCTATATCAGTCTTGAGCCCTAAGTACTTGTTC
FD942121       --> ..................................................
FD945431       --> ..................................................
FD529283       --> ..................................................

               901    -    951
UN21231        --> TTGAACTCTTCGTGGCTCAAATCTGCAAACTCGTTGAGACCAAGCCAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- ..................................................
EV548832       <-- TTGAACTCTTCGTGGCTCAAATCTGCAAACTCGTTGAGACCAAGCCAGTA
FY443649       <-- TTGAACTCTTCGTGGCTCAAATCTGCAAACTCGTTGAGACCAAGCCAGTA
FD945911       <-- TTGAACTCTTCGTGGCTCAAATCTGCAAACTCGTTGAGACCAAGCCAGTA
EV550449       <-- TTGAACTCTTCGTGGCTCAAATCTGCAAACTCGTTGAGACCAAGCCAGTA
FD561727       <-- TTGAACTCTTCATGGCTCAAATCTGCAAACTCGTTGAGACCAAGCCAGTA
EV524855       <-- TTGAACTCTTCGTGGCTCAAATCTGCAAACTCGTTGAGACCAAGCCAGTA
EV568523       <-- TTGAACTCTTCGTGGCTCAAATCTGCAAACTCGTTGAGACCAAGCCAGTA
FD532959       <-- TTGAACTCTTCGTGGCTCAAATCTGCAAACTCGTTGAGACCAAGCCAGTA
FD949834       <-- TTGAACTCTTCGTGGCTCAAATCTGCAAACTCGTTGAGACCAAGCCAGTA
FD963082       <-- TTGAACTCTTCGTGGCTCAAATCTGCAAACTCGTCGAGACCAAGCCAGTA
FD536566       <-- TTGAACTCTTCGTGGCTCAAATTTGCAAACTCGTTGAGACCAAGCCAGTA
FD948888       <-- TTGAACTCTTCGTGGCTCAAATCTGCAAACTCGTTGAGACCAAGCCAGTA
FD963076       <-- ..................................................
EY939568       <-- ..................................................
FD959488       --> ..................................................
FD531998       --> ..................................................
EV545746       --> ..................................................
EV544435       --> TTGAACTCTTCGTGGCTCAAATCTGCAAACTCGT................
EV529753       --> TTGAACT...........................................
FD942121       --> ..................................................
FD945431       --> ..................................................
FD529283       --> ..................................................

               951    -   1001
UN21231        --> GCTTTTCGCTTTCTTGTTGGTTTCATCGATGTGTTTTAGGTTATCTTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- ..................................................
EV548832       <-- GCTTTTCGCTTc......................................
FY443649       <-- GCTTTTCGCTTTCTTGTTGGTTTCATCGATGTGTTTTAGGTTATCTTTGA
FD945911       <-- GCTTTTCGCTTTCTTGTTGGTTTCATCGATGTGTTTTAGGTTATCTTTGA
EV550449       <-- GCTTTTCGCTTTCTTGTTGGTTTCATCGATGTGTTTTAGGTTATCTTTGA
FD561727       <-- GCTTTTCGCTTTCTTGTTGGTTTCATCGATGTGTTTTAGGTTATCTTTGA
EV524855       <-- GCTTTTCGCTTTCTTGTTGGTTTCATCGATGTGTTTTAGGTTATCTTTGA
EV568523       <-- GCTTTTCGCTTTCTTGTTGGTTTCATCGATGTGTTTTAGGTTATCTTTGA
FD532959       <-- GCTTTTCGCTTTCTTGTTGGTTTCATCGATGTGTTTTAGGTTATCTTTGA
FD949834       <-- GCTTTTCGCTTTCTTGTTGGTTTCATCGATGTGTTTTAGGTTATCTTTGA
FD963082       <-- GCTTTTCGCTTTCTTGTTGGTTTCATCGATGTGTTTTAGGTTATCTTTGA
FD536566       <-- GCTTTTCGCTTTCTTGTTGGTTTCATCGATGTGTTTTAGGTTATCTTTGA
FD948888       <-- GCTTTTCGCTTTCTTGTTGGTTTCATCGATGTGTTTTAGGTTATCTTTGA
FD963076       <-- ..................................................
EY939568       <-- ..................................................
FD959488       --> ..................................................
FD531998       --> ..................................................
EV545746       --> ..................................................
EV544435       --> ..................................................
EV529753       --> ..................................................
FD942121       --> ..................................................
FD945431       --> ..................................................
FD529283       --> ..................................................

               1001   -   1051
UN21231        --> AAACTTCGAACCTACGAAACTTCTCTTCAACGGTTTCGTAGGCTTTCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- ..................................................
EV548832       <-- ..................................................
FY443649       <-- AAACTTCGAACCTACGAAACTTCTCTTCAACGGTTTCGTAGGCTTTCTCG
FD945911       <-- AAACTTCGAACCTACGAAACGTCTCTTCAACGGTTTCGTAGGCTTTCTCG
EV550449       <-- ATACTTCGAACCTACGCAACTTCTCTTCAACGGTTTCGTAAGCTTTCTCG
FD561727       <-- AAACTTCGAACCTACGAAACTTCTCTTCAACGGTTTCGTAGGCTTTCTCG
EV524855       <-- AAACTTCGAACCTACGAAACTTCTCTTCAACGGTTTCGTAGGCTTTCTCG
EV568523       <-- AAACTTCGAACCTACGAAACTTCTCTTCAACGGTTTCGTAGGCTTTCTCG
FD532959       <-- ATACTTCGAACCTACGCAACTTCTCTTCAACGGTTTCGTAAGCTTTCTCG
FD949834       <-- AAACTTCGAACCTACGAAACTTCTCTTCAACGGTTTCGTAGGCTTTCTCG
FD963082       <-- ATACTTCGAACCTACGCAACTTCTCTTCAACGGTTTCGTAAGCTTTCTCG
FD536566       <-- AAACTTCGAACCTACGAAACTTCTCTTCAACGGTTTCGTAGGCTTTCTCG
FD948888       <-- AAACTTCGAACCTACGAAACTTCTCTTCAACGGTTTCGTAGGCTTTCTCG
FD963076       <-- ...............................GGTTTCGTAGGCTTTCTCG
EY939568       <-- ..................................................
FD959488       --> ..................................................
FD531998       --> ..................................................
EV545746       --> ..................................................
EV544435       --> ..................................................
EV529753       --> ..................................................
FD942121       --> ..................................................
FD945431       --> ..................................................
FD529283       --> ..................................................

               1051   -   1101
UN21231        --> AAGTTGGAGATCCAGTTTTCGAAGAGTTCTATGAGTTTGTCATGAGACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- ..................................................
EV548832       <-- ..................................................
FY443649       <-- AAGTTGGAGATCCAGTTTTCGAAGAGTTCTATGAGTTTGTCATGAGACTC
FD945911       <-- AAGTTGGAGATCCAGTTTTCGAAGAGTTCTATGAGTTTGTCATGAGACTC
EV550449       <-- AAGTTGGAGATCCAGTTTTCGAAGAGTTCTATGAGTTTGTCATGAGACTC
FD561727       <-- AAGTTGGAGATCCAGTTTTCGAAGAGTTCTATGAGTTTGTCATGAGACTC
EV524855       <-- AAGTTGGAGATCCAGTTTTCGAAGAGTTCTATGAGTTTGTCATGAGACTC
EV568523       <-- AAGTTGGAGATCCAGTTTTCGAAGAGTTCTATGAGTTTGTCATGAGACTC
FD532959       <-- AAGTTGGAGATCCAGTTTTCGAAGAGTTCTATGAGTTTGTCATGAGACTC
FD949834       <-- AAGTTGGAGATCCAGTTTTCGAAGAGTTCTATGAGTTTGTCATGAGACTC
FD963082       <-- AAGTTGGAGATCCAGTTTTCGAAGAGTTCTATGAGTTTGTCATGAGACTC
FD536566       <-- AAGTTGGAGATCCAGTTTTCGAAGAGTTCTATGAGTTTGTCATGAGACTC
FD948888       <-- AAGTTGGAGATCCAGTTTTCGAAGAGTTCTATGAGTTTGTCATGAGACTC
FD963076       <-- AAGTTGGAGATCCAGTTTTCGAAGAGTTCTATGAGTTTGTCATGAGACTC
EY939568       <-- ..................................................
FD959488       --> ..................................................
FD531998       --> ..................................................
EV545746       --> ..................................................
EV544435       --> ..................................................
EV529753       --> ..................................................
FD942121       --> ..................................................
FD945431       --> ..................................................
FD529283       --> ..................................................

               1101   -   1151
UN21231        --> CAAATCCTCGGGGGAGTATCCGACGATGGAGAAGTCGTGGGAAGCAGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- ..................................................
EV548832       <-- ..................................................
FY443649       <-- CAAATCCTCGGGGGAGTATCCGACGATGGAGAAGTCGTGGGAAGCAGCGA
FD945911       <-- CAAATCCTCGGGGGAGTATCCGACGATGGAGAAGTCGTGGGAAGCAGCGA
EV550449       <-- CAAGTCCTCAGGGGAGTATCCAACAATGGAGAAGTCGTGGGAAGCAGCGA
FD561727       <-- CAAATCCTCGGGGGAGTATCCGACGATGGAGAAGTCGTGGGAAGCAGCGA
EV524855       <-- CAAATCCTCGGGGGAGTATCCGACGATGGAGAAGTCGTGGGAAGCAGCGA
EV568523       <-- CAAATCCTCGGGGGAGTATCCGACGATGGAGAAGTCGTGGGAAGCAGCGA
FD532959       <-- CAAGTCCTCAGGGGAGTATCCAACAATGGAGAAGTCGTGGGAAGCAGCGA
FD949834       <-- CAAATCCTCGGGGGAGTATCCGACGATGGAGAAGTCGTGGGAAGCAGCGA
FD963082       <-- CAAGTCCTCAGGGGAGTATCCAACAATGGAGAAGTCGTGGGAAGCAGCGA
FD536566       <-- CAAATCCTCGGGGGAGTATCCGACGATGGAGAAGTCGTGGGAAGCAGCGA
FD948888       <-- CAAATCCTCGGGGGAGTATCCGACGATGGAGAAGTCGTGGGAAGCAGCGA
FD963076       <-- CAAATCCTCGGGGGAGTATCCGACGATGGGGAAGTCGTGGGAAGCAGCGA
EY939568       <-- .....CCTCGGGGGAGTA-CCGACGATGGAGAAGTCGTGGGAAGCAGCGA
FD959488       --> ..................................................
FD531998       --> ..................................................
EV545746       --> ..................................................
EV544435       --> ..................................................
EV529753       --> ..................................................
FD942121       --> ..................................................
FD945431       --> ..................................................
FD529283       --> ..................................................

               1151   -   1201
UN21231        --> AAGAGAGAGATGCAGCAGATAAGGCAAGAGCAAAACAGAGGATTCTTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- ..................................................
EV548832       <-- ..................................................
FY443649       <-- AAGAGAGAGATGCAGCAGATAAGGCAAGAGCAAAACAGAGGATTCTTGTG
FD945911       <-- AAGAGAGAGATGCAGCAGATAAGGCAAGAGCAAAACAGAGGATTCTTGTG
EV550449       <-- AAGAGAGAGATGCAGCAGATAAGGCAAGAGCAAAACAGAGGATTCTTGTG
FD561727       <-- AAGAGAGAGATGCAGCAGATAAGGCAAGAGAAAAACAGAGGATTCTTGTG
EV524855       <-- AAGAGAGAGATGCAGCAGATGAGGCAAGAGCAAAACAGAGGATTCTTGTG
EV568523       <-- AAGAGAGAGATGCAGCAGATAAGGCAAGAGCAAAACAGAGGATTCTTGTG
FD532959       <-- AAGAGAGAGATGCAGCAGATAAGGCAAGAGCAAAACAGAGGATTCTTGTG
FD949834       <-- AAGAGAGAGATGCAGCAGATAAGGCAAGAGCAAAACAGAGGATTCTTGTG
FD963082       <-- AAGAGAGAGATGCAGCAGATAAGGCAAGAGCAAAACAGAGGATTCTTGTG
FD536566       <-- AAGAGAGAGATGCAGCAGATAAGGCAAGAGCAAAACAGAGGATTCTTGTG
FD948888       <-- AAGAGAGAGATGCAGCAGATAAGGCAAGAGCAAAACAGAGGATTCTTGTG
FD963076       <-- AAGAGAGAGATGCAGCAGATAAGGCAAGAGCAAAACAGAGGATTCTTGTG
EY939568       <-- AAGAGAGAGATGCAGCAGATAAGGCAAGAGCAAAACAGAGGATTCTTGTG
FD959488       --> ..................................................
FD531998       --> ..................................................
EV545746       --> ..................................................
EV544435       --> ..................................................
EV529753       --> ..................................................
FD942121       --> ..................................................
FD945431       --> ..................................................
FD529283       --> ..................................................

               1201   -   1251
UN21231        --> GGAGAAGAGAGAGCCATTAGGGTAACTAGATGTTTGTACTTCGTAAGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534781       <-- ..................................................
EV548832       <-- ..................................................
FY443649       <-- GGAGAAGAGAG.......................................
FD945911       <-- GGAGAAGAGAGAGCCATTAGGGTAACTAGATGTTTGTACTTCGTAAGTTG
EV550449       <-- GGAGAAGAGAGAGCCATTAGGGTAACTAGATGTTTGTACTTCGTAAGTTG
FD561727       <-- GGAGAAGAGAGAGCCATTAGGGTAACTAGATGTTTGTACTTCGTAAGTTG
EV524855       <-- GGAGAAGAGAGAGCCATTAGGGTAACTAGATGTTTGTACTTCGCAAGTTG
EV568523       <-- GGAGAAGAGAGAGCCATTAGGGTAACTAGATGTTTGTACTTCGTAAGTTc
FD532959       <-- GGAGAAGAGAGAGCCATTAGGATAATTAGATGTTTATACTTTGTAAGTga
FD949834       <-- GGAGAAGAGAGAGCCATTAGGGTAACTAGATGTTTGTACTTCGTAAGTTG
FD963082       <-- GGAGAAGAGAGAGCCATTAGGATAATTAGATGTTTGTACTTTGTAAGTga
FD536566       <-- GGAGAAGAGAGAGCCATTAGGGTAACTAGATGTTTGTACTTCGTAAGTTG
FD948888       <-- GGAGAAGAGAGAGCCATTAGGGTAACTAGATGTTTGTACTTCATAAGTTt
FD963076       <-- GGAGAAGAGAGAGCCATTAGGGTAACTAGATGTTTGTACTTCGTAAGTTG
EY939568       <-- GGAGAAGAGAGAGCCATTAGGGTAACTAGATGTTTGTACTTCGTAAGTTG
FD959488       --> ..................................................
FD531998       --> ..................................................
EV545746       --> ..................................................
EV544435       --> ..................................................
EV529753       --> ..................................................
FD942121       --> ..................................................
FD945431       --> ..................................................
FD529283       --> ..................................................

               1251   -   1301
UN21231        --> ATGCC
                   ~~~~~
FD534781       <-- .....
EV548832       <-- .....
FY443649       <-- .....
FD945911       <-- ATcc.
EV550449       <-- ATcc.
FD561727       <-- ATcc.
EV524855       <-- ATcc.
EV568523       <-- c....
FD532959       <-- tcc..
FD949834       <-- cc...
FD963082       <-- tcc..
FD536566       <-- ATcc.
FD948888       <-- cc...
FD963076       <-- ATcc.
EY939568       <-- ATGCC
FD959488       --> .....
FD531998       --> .....
EV545746       --> .....
EV544435       --> .....
EV529753       --> .....
FD942121       --> .....
FD945431       --> .....
FD529283       --> .....